Psyllid ID: psy6113

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------
Protein Sequence
MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccEEEEEcccccccccccccccHHHHHHHHHHHccccHHHHHHcHHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccHHcHHHHHHHccccccHHcccccHHHHHHHHHHHHccccccccccEEEEHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccHHccccEEEEcccccHHHHHHHHHHHHcccEEEEEccccHHHHccHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHcccEEEEcHccHHHHHHHHHHHHHHHccccEEEEccccccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEcccHHHHHHHHccccccccccHHHHHHHHHHHHccHHcccccEEEEEcccEEEccccccHHcccccccccccEEEEcccccccEccccccccccEEEEEEHHHHHHHHcccccHHHHHHccccEEEEcHHHHHHHHccHHHHHccc
Coil and Loop (DISEMBL)
mintgklsgLTIFITGASRGIGKAIALKAAKDGANIVIAAktaephpklpgtIYSAAKEVedaggnclpcivDIRDEHAVQSAVNAAVDKfggidilvnnasaisltdtantplkkydLMNQINARGTYLVKASQGLEIQSAVNAAVDKfggidilvnnasaisltdtantplkkydLMNQINARGTYLVSQkclpylkksnhahilnispplnlnpfwfkNHVAYTISKYGMSMCALGMaeefkgdniavnalwprTAIYTAAIEMLtggsadakatsrkpeiMADAAYYIlssnppsltgqfliddEVLKAQHIdleqysyvpngaaegswhidlktgsgssgrgkpsstvdATLTMTEKNFIALFegklkptsafmtgklKISGNLQKAMKLEKLMGALKSKL
Flexible Loop (DISEMBL)
mintgklsgLTIFITGASRGIGKAIALKAAKDGANIVIAaktaephpklPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIspplnlnpfWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKtgsgssgrgkpssTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL
Low Complexity Region (SEG)
MINTGKLSGLTIFITGASRgigkaialkaakdgaNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTgsgssgrgkpssTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL
Disordered region (IsUnstruct)
******LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG************IMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDL*******************LTMTEKNFIALFEGKLKPTSAFMTGKLKI*********************
Disordered Region (DISOPRED)
***TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM************RKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHID*******************TLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALK***
Disordered Region (DISEMBL)
MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG********RKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKT*************VDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL
Disordered Region (DISPRO)
***TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL*S**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	406	2.2.26 [Sep-21-2011]
A4FUZ6	418	Hydroxysteroid dehydrogen	yes	N/A	0.640	0.622	0.537	6e-82
Q2TPA8	490	Hydroxysteroid dehydrogen	yes	N/A	0.640	0.530	0.515	1e-79
Q66KC4	417	Hydroxysteroid dehydrogen	yes	N/A	0.453	0.441	0.671	4e-67
Q6PAY8	417	Hydroxysteroid dehydrogen	N/A	N/A	0.453	0.441	0.656	3e-65
Q4V8F9	524	Hydroxysteroid dehydrogen	yes	N/A	0.453	0.351	0.634	3e-64
Q6P5L8	415	Hydroxysteroid dehydrogen	yes	N/A	0.453	0.443	0.656	1e-62
Q6YN16	418	Hydroxysteroid dehydrogen	yes	N/A	0.5	0.485	0.576	1e-61
Q5RA68	418	Hydroxysteroid dehydrogen	yes	N/A	0.5	0.485	0.572	3e-61
Q73SC8	275	Uncharacterized NAD-depen	N/A	N/A	0.5	0.738	0.258	2e-12
Q96LJ7	313	Dehydrogenase/reductase S	no	N/A	0.305	0.396	0.331	6e-12

>sp|A4FUZ6|HSDL2_BOVIN Hydroxysteroid dehydrogenase-like protein 2 OS=Bos taurus GN=HSDL2 PE=2 SV=1

 Score =  305 bits (780), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 174/324 (53%), Positives = 205/324 (63%), Gaps = 64/324 (19%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           NTGKL+G T+FITGASRGIGKAIALKAAKDGANIVIAAKTA+ HPKLPGTIY+AA+E++ 
Sbjct: 4   NTGKLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQAHPKLPGTIYTAAEEIKA 63

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
           AGG  LPCIVD+RDE  + SAV  AV+KFGGIDILVNNASAISLT+T  TP KK DLM  
Sbjct: 64  AGGKALPCIVDVRDEEQISSAVEKAVEKFGGIDILVNNASAISLTNTLETPTKKVDLMMN 123

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 182
           +N RGTY                                   LT  A  P          
Sbjct: 124 VNTRGTY-----------------------------------LTSKACIP---------- 138

Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
                YL   K    L   N +  LN++P       WFK H AYTI+KYGMSMC LGMAE
Sbjct: 139 -----YLKKSKVAHIL---NLSPPLNLNP------LWFKQHCAYTIAKYGMSMCVLGMAE 184

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTG 302
           EFKG+ IAVNALWPRTAI+TAA++ML G   +++   RK +IMADAAY I    P S TG
Sbjct: 185 EFKGE-IAVNALWPRTAIHTAAMDMLGGSGVESQC--RKVDIMADAAYCIF-KKPKSFTG 240

Query: 303 QFLIDDEVLKAQHI-DLEQYSYVP 325
            F+ID+ +LK + I + + Y+  P
Sbjct: 241 NFIIDENILKEEGIKNFDVYAITP 264

Has apparently no steroid dehydrogenase activity.
Bos taurus (taxid: 9913)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q2TPA8|HSDL2_MOUSE Hydroxysteroid dehydrogenase-like protein 2 OS=Mus musculus GN=Hsdl2 PE=2 SV=1

 Score =  296 bits (759), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 167/324 (51%), Positives = 202/324 (62%), Gaps = 64/324 (19%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           NTGKL+G T+FITGASRGIGKAIALKAAKDGANIVIAAKT + HPKL GTIY+AA+E+E 
Sbjct: 4   NTGKLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTTQKHPKLLGTIYTAAEEIEA 63

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
           AGG  LPC+VD+RDE  + SAV  AV+KFGGIDILVNNASAISLT+T +TP K+ DLM  
Sbjct: 64  AGGTALPCVVDVRDEQQINSAVEKAVEKFGGIDILVNNASAISLTNTLDTPTKRVDLMMN 123

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 182
           +N RGTY                                   LT  A  P  K   +  I
Sbjct: 124 VNTRGTY-----------------------------------LTSKACIPFLKKSKVGHI 148

Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
                              N +  LN++P       WFK H AYTI+KYGMSMC LGMAE
Sbjct: 149 ------------------LNLSPPLNLNP------LWFKQHCAYTIAKYGMSMCVLGMAE 184

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTG 302
           EF+G+ IAVNALWPRTAI+TAA++ML G   + +   RK +I+ADAAY I    P S TG
Sbjct: 185 EFRGE-IAVNALWPRTAIHTAAMDMLGGSGVENQC--RKVDIIADAAYSIF-KRPKSFTG 240

Query: 303 QFLIDDEVLKAQHI-DLEQYSYVP 325
            F+ID+ +LK + I + + Y+  P
Sbjct: 241 NFIIDENILKEEGIKNFDVYAIAP 264

Has apparently no steroid dehydrogenase activity.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q66KC4|HSDL2_XENTR Hydroxysteroid dehydrogenase-like protein 2 OS=Xenopus tropicalis GN=hsdl2 PE=2 SV=1

 Score =  255 bits (652), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 127/189 (67%), Positives = 150/189 (79%), Gaps = 5/189 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I +AV  AVD FGGIDILVNNASAISLT+T  TP+KK DLM  IN RGTYL S+ C+PY
Sbjct: 80  QISAAVEKAVDTFGGIDILVNNASAISLTNTLETPMKKVDLMMGINTRGTYLTSKICIPY 139

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           LKKS  AHILN+SPPLNLNP WFKNH AYTI+KYGMSMCALGM+EE+KG+ IAVNALWP+
Sbjct: 140 LKKSKVAHILNLSPPLNLNPIWFKNHCAYTIAKYGMSMCALGMSEEYKGE-IAVNALWPK 198

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
           TAI+TAA++ML G   D +   R P+IMADAAY IL S P   TG F+ID+E+LK + I 
Sbjct: 199 TAIHTAAMDMLGGSGVDKQC--RTPDIMADAAYAIL-SKPKDFTGNFVIDEELLKHEGIK 255

Query: 317 DLEQYSYVP 325
           DL+ Y+  P
Sbjct: 256 DLDVYAVSP 264

Has apparently no steroid dehydrogenase activity.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6PAY8|HSDL2_XENLA Hydroxysteroid dehydrogenase-like protein 2 OS=Xenopus laevis GN=hsdl2 PE=2 SV=1

 Score =  249 bits (636), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 124/189 (65%), Positives = 149/189 (78%), Gaps = 5/189 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I +AV  AVD FGGIDILVNNASAISLT+T  T +KK DLM  IN RGTYL S+ C+PY
Sbjct: 80  QISAAVEKAVDAFGGIDILVNNASAISLTNTLETSMKKVDLMMGINTRGTYLTSKICIPY 139

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           LKKS  AHILN+SPPLNLNP WFKNH AYTI+KYGMSMCALGM+EE+KG+ IAVNALWP+
Sbjct: 140 LKKSKVAHILNLSPPLNLNPMWFKNHCAYTIAKYGMSMCALGMSEEYKGE-IAVNALWPK 198

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
           TAI+TAA++ML G   D +   RKP+IMADAAY IL+      TG F+ID+E+L+ + I 
Sbjct: 199 TAIHTAAMDMLGGSGVDKQC--RKPDIMADAAYAILTKT-KDFTGNFVIDEELLQQEGIK 255

Query: 317 DLEQYSYVP 325
           DL+ Y+  P
Sbjct: 256 DLDVYAISP 264

Has apparently no steroid dehydrogenase activity.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q4V8F9|HSDL2_RAT Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus GN=Hsdl2 PE=2 SV=1

 Score =  246 bits (627), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/189 (63%), Positives = 146/189 (77%), Gaps = 5/189 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I SAV  AV++FGGIDILVNNASAISLT+T  TP K+ DLM  +N RGTYL S+ C+P+
Sbjct: 80  QINSAVEKAVERFGGIDILVNNASAISLTNTLETPTKRVDLMMSVNTRGTYLTSKACIPF 139

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEF+G+ IAVNALWPR
Sbjct: 140 LKKSKVAHILNLSPPLNLNPMWFKQHCAYTIAKYGMSMCVLGMAEEFRGE-IAVNALWPR 198

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
           TAI+TAA++ML  G A  ++  RK +I+ADAAY I    P S TG F+ID+ +LK + I 
Sbjct: 199 TAIHTAAMDML--GGAGVESQCRKVDIIADAAYSIF-KRPKSFTGNFIIDENILKEEGIK 255

Query: 317 DLEQYSYVP 325
           D + Y+  P
Sbjct: 256 DFDIYAITP 264

Has apparently no steroid dehydrogenase activity.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6P5L8|HSDL2_DANRE Hydroxysteroid dehydrogenase-like protein 2 OS=Danio rerio GN=hsdl2 PE=2 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 124/189 (65%), Positives = 146/189 (77%), Gaps = 5/189 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I  AV  AV+KFGGIDILVNNASAI+LT T  TP+KK DLM  IN RGTYL S+ C+P+
Sbjct: 80  QINDAVEQAVEKFGGIDILVNNASAINLTGTLQTPMKKADLMLGINLRGTYLTSKLCIPH 139

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           L KS + HILN+SPPLNLNP WFKNH AYTI+KYGMSMC LGMAEEF+G +IAVNALWP+
Sbjct: 140 LLKSKNPHILNLSPPLNLNPIWFKNHTAYTIAKYGMSMCVLGMAEEFRG-SIAVNALWPK 198

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
           TAI TAA++ML GGS   K   RK EIMADAAY I    P S TGQF+ID+++LK + I 
Sbjct: 199 TAIQTAAMDML-GGSEVGK-QCRKVEIMADAAYAIF-KQPTSFTGQFVIDEDILKKEGIK 255

Query: 317 DLEQYSYVP 325
           D + Y+  P
Sbjct: 256 DFDVYAVEP 264

Has apparently no steroid dehydrogenase activity.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6YN16|HSDL2_HUMAN Hydroxysteroid dehydrogenase-like protein 2 OS=Homo sapiens GN=HSDL2 PE=1 SV=1

 Score =  237 bits (605), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/208 (57%), Positives = 151/208 (72%), Gaps = 5/208 (2%)

Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 189
           +V      +I +AV  A+ KFGGIDILVNNASAISLT+T +TP K+ DLM  +N RGTYL
Sbjct: 72  IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 131

Query: 190 VSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI 249
            S+ C+PYLKKS  AHILNISPPLNLNP WFK H AYTI+KYGMSM  LGMAEEFKG+ I
Sbjct: 132 ASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGE-I 190

Query: 250 AVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDE 309
           AVNALWP+TAI+TAA++ML G   +++   RK +I+ADAAY I    P S TG F+ID+ 
Sbjct: 191 AVNALWPKTAIHTAAMDMLGGPGIESQC--RKVDIIADAAYSIF-QKPKSFTGNFVIDEN 247

Query: 310 VLKAQHID-LEQYSYVPNGAAEGSWHID 336
           +LK + I+  + Y+  P    +  + +D
Sbjct: 248 ILKEEGIENFDVYAIKPGHPLQPDFFLD 275

Has apparently no steroid dehydrogenase activity.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q5RA68|HSDL2_PONAB Hydroxysteroid dehydrogenase-like protein 2 OS=Pongo abelii GN=HSDL2 PE=2 SV=1

 Score =  236 bits (601), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 119/208 (57%), Positives = 151/208 (72%), Gaps = 5/208 (2%)

Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 189
           +V      +I +AV  A+ +FGGIDILVNNASAISLT+T +TP K+ DLM  +N RGTYL
Sbjct: 72  IVDVRDEQQINAAVEKAIKQFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 131

Query: 190 VSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI 249
            S+ C+PYLKKS  AHILNISPPLNLNP WFK H AYTI+KYGMSM  LGMAEEFKG+ I
Sbjct: 132 ASKACIPYLKKSKVAHILNISPPLNLNPIWFKQHCAYTIAKYGMSMYVLGMAEEFKGE-I 190

Query: 250 AVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDE 309
           AVNALWP+TAI+TAA++ML G   +++   RK +I+ADAAY I    P S TG F+ID+ 
Sbjct: 191 AVNALWPKTAIHTAAMDMLGGPGIESQC--RKVDIIADAAYSIF-QKPKSFTGNFVIDES 247

Query: 310 VLKAQHID-LEQYSYVPNGAAEGSWHID 336
           +LK + I+  + Y+  P    +  + +D
Sbjct: 248 ILKEEGIENFDVYAIKPGHPLQPDFFLD 275

Has apparently no steroid dehydrogenase activity.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q73SC8|Y4146_MYCPA Uncharacterized NAD-dependent oxidoreductase MAP_4146 OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=MAP_4146 PE=1 SV=1

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 45/248 (18%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP-------HPKLPGTIYSAA 57
           G L G   FITGA+RG G++ A++ A +GA+I IA     P        P  P  +   A
Sbjct: 6   GSLQGRVAFITGAARGQGRSHAVRLAAEGADI-IACDICAPVSASVTYAPASPEDLDETA 64

Query: 58  KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
           + VED G   L  ++D+RD+ A++  V   +++FG +D++V NA  +S         +++
Sbjct: 65  RLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQW 124

Query: 118 DLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA--------------- 162
           D +  +N  GT+         +++ V A ++   G  I+V ++SA               
Sbjct: 125 DTVIGVNLTGTWRT-------LRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASK 177

Query: 163 ---ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK-------SNHAHILNISPP 212
               +LT+T    L +Y +  ++N+   Y V     P ++        + H   ++  PP
Sbjct: 178 HGLTALTNTLAIELGEYGI--RVNSIHPYSVET---PMIEPEAMMEIFARHPSFVHSFPP 232

Query: 213 LNLNPFWF 220
           + + P  F
Sbjct: 233 MPVQPNGF 240

Mycobacterium paratuberculosis (taxid: 1770)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q96LJ7|DHRS1_HUMAN Dehydrogenase/reductase SDR family member 1 OS=Homo sapiens GN=DHRS1 PE=1 SV=1

 Score = 72.4 bits (176), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 24/148 (16%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           ++G    +TGASRGIG+ IAL+  K GA + I  +  +       T+   A+E +  GG 
Sbjct: 5   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLD-------TLRVVAQEAQSLGGQ 57

Query: 67  CLPCIVDIRDEHAVQSAVNAA-VDKFGGIDILVNNASA--ISLTDTAN-----TPLKKYD 118
           C+P + D   E  V+S       ++ G +D+LVNNA A   ++ +T N     TP   +D
Sbjct: 58  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 117

Query: 119 LMNQINARGTY---------LVKASQGL 137
            +N +  RG Y         +V A QGL
Sbjct: 118 DINNVGLRGHYFCSVYGARLMVPAGQGL 145

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
157128822	415	short-chain dehydrogenase [Aedes aegypti	0.849	0.831	0.521	1e-116
157128824	415	short-chain dehydrogenase [Aedes aegypti	0.849	0.831	0.518	1e-116
170048091	414	glucose 1-dehydrogenase 2 [Culex quinque	0.842	0.826	0.481	3e-98
391336370	406	PREDICTED: hydroxysteroid dehydrogenase-	0.852	0.852	0.452	3e-97
405963114	431	Hydroxysteroid dehydrogenase-like protei	0.837	0.788	0.460	9e-93
58375839	418	Anopheles gambiae str. PEST AGAP012513-P	0.655	0.636	0.548	3e-91
195503710	413	GE23752 [Drosophila yakuba] gi|194184867	0.657	0.646	0.565	3e-91
324515893	411	Hydroxysteroid dehydrogenase-like protei	0.849	0.839	0.423	2e-90
320164357	440	SCP2 sterol transfer family protein [Cap	0.645	0.595	0.573	4e-90
324506424	409	Hydroxysteroid dehydrogenase-like protei	0.842	0.836	0.422	7e-89

>gi|157128822|ref|XP_001655210.1| short-chain dehydrogenase [Aedes aegypti] gi|94468978|gb|ABF18338.1| dehydrogenase [Aedes aegypti] gi|403182484|gb|EJY57419.1| AAEL002416-PB [Aedes aegypti]

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/476 (52%), Positives = 289/476 (60%), Gaps = 131/476 (27%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           MINTGKL+G TIFITGASRGIGKAIALKAA+DGANIV+AAKTAEPHPKLPGTI++AA E+
Sbjct: 1   MINTGKLAGRTIFITGASRGIGKAIALKAAQDGANIVVAAKTAEPHPKLPGTIFTAAAEI 60

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
           E AGG  LPC+                      +D+   NA                   
Sbjct: 61  EAAGGKALPCV----------------------VDVRDENA------------------- 79

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
                             +++AV  AV+KFGGIDILVNNASAISLT T  T +K+YDLM+
Sbjct: 80  ------------------VRTAVKNAVEKFGGIDILVNNASAISLTPTEQTDMKRYDLMH 121

Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
            IN RGT+LVS++C+PYLKKSNHAHILNISPPLN++  WF NHVAYT++KYGMSMC LGM
Sbjct: 122 NINTRGTFLVSKECIPYLKKSNHAHILNISPPLNMSAHWFSNHVAYTMAKYGMSMCVLGM 181

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSL 300
           AEEFK DN+AVNALWPRTAIYTAA+EMLTG   ++   SRKPEIM+DAAY IL   P + 
Sbjct: 182 AEEFKKDNVAVNALWPRTAIYTAAMEMLTG--KESNQFSRKPEIMSDAAYAILCKEPKNC 239

Query: 301 TGQFLIDDEVLKAQHI-DLEQYSYVPNG--------------------AAEGSWHIDLKT 339
           TG FLIDDEVL+A  I D++QY+ +P                      AAEGS    LK 
Sbjct: 240 TGNFLIDDEVLQAAGITDMKQYACIPENADKLMPDFFLDVAPEKLVEFAAEGSHAASLKK 299

Query: 340 GSGSSG-------------------------------------------------RGKPS 350
            +  +G                                                 +GK  
Sbjct: 300 AAAPAGKIEGLFQKIESLLSDEIVKKTGAVFEFNVKGEEAGLWFADLKNGTGKVGKGKSP 359

Query: 351 STVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL 406
            T DATLTM  K+F  +F GKLKP SAFMTGKLKISG+LQKAMKLEKLMG LKSKL
Sbjct: 360 VTADATLTMDSKHFFDMFSGKLKPASAFMTGKLKISGDLQKAMKLEKLMGGLKSKL 415

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157128824|ref|XP_001655211.1| short-chain dehydrogenase [Aedes aegypti] gi|108882166|gb|EAT46391.1| AAEL002416-PA [Aedes aegypti]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/476 (51%), Positives = 288/476 (60%), Gaps = 131/476 (27%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M NTGKL+G TIFITGASRGIGKAIALKAA+DGANIV+AAKTAEPHPKLPGTI++AA E+
Sbjct: 1   MKNTGKLAGRTIFITGASRGIGKAIALKAAQDGANIVVAAKTAEPHPKLPGTIFTAAAEI 60

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
           E AGG  LPC+                      +D+   NA                   
Sbjct: 61  EAAGGKALPCV----------------------VDVRDENA------------------- 79

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
                             +++AV  AV+KFGGIDILVNNASAISLT T  T +K+YDLM+
Sbjct: 80  ------------------VRTAVKNAVEKFGGIDILVNNASAISLTPTEQTDMKRYDLMH 121

Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
            IN RGT+LVS++C+PYLKKSNHAHILNISPPLN++  WF NHVAYT++KYGMSMC LGM
Sbjct: 122 NINTRGTFLVSKECIPYLKKSNHAHILNISPPLNMSAHWFSNHVAYTMAKYGMSMCVLGM 181

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSL 300
           AEEFK DN+AVNALWPRTAIYTAA+EMLTG   ++   SRKPEIM+DAAY IL   P + 
Sbjct: 182 AEEFKKDNVAVNALWPRTAIYTAAMEMLTG--KESNQFSRKPEIMSDAAYAILCKEPKNC 239

Query: 301 TGQFLIDDEVLKAQHI-DLEQYSYVPNG--------------------AAEGSWHIDLKT 339
           TG FLIDDEVL+A  I D++QY+ +P                      AAEGS    LK 
Sbjct: 240 TGNFLIDDEVLQAAGITDMKQYACIPENADKLMPDFFLDVAPEKLVEFAAEGSHAASLKK 299

Query: 340 GSGSSG-------------------------------------------------RGKPS 350
            +  +G                                                 +GK  
Sbjct: 300 AAAPAGKIEGLFQKIESLLSDEIVKKTGAVFEFNVKGEEAGLWFADLKNGTGKVGKGKSP 359

Query: 351 STVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL 406
            T DATLTM  K+F  +F GKLKP SAFMTGKLKISG+LQKAMKLEKLMG LKSKL
Sbjct: 360 VTADATLTMDSKHFFDMFSGKLKPASAFMTGKLKISGDLQKAMKLEKLMGGLKSKL 415

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048091|ref|XP_001851531.1| glucose 1-dehydrogenase 2 [Culex quinquefasciatus] gi|167870283|gb|EDS33666.1| glucose 1-dehydrogenase 2 [Culex quinquefasciatus]

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 230/478 (48%), Positives = 275/478 (57%), Gaps = 136/478 (28%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M+NTGKL+G T+FITGASRGIGKAIALKAA+DGANIV+AAKTAEPHPKLPGTIY+AA E+
Sbjct: 1   MLNTGKLAGRTLFITGASRGIGKAIALKAAQDGANIVVAAKTAEPHPKLPGTIYTAAAEI 60

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
           E AGG  LPC+                      +D+   NA                   
Sbjct: 61  EAAGGKALPCV----------------------VDVRDENA------------------- 79

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
                             +++A+ +AV+KFGGIDILVNNASAISLT T  T +K+YDLM+
Sbjct: 80  ------------------VRAAIKSAVEKFGGIDILVNNASAISLTPTEQTDMKRYDLMH 121

Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
            IN RGT+LVS++C+PYLKKSNHAHILNISPPLN+NP WF NHVAYT++KYGMSMC LGM
Sbjct: 122 NINTRGTFLVSKECIPYLKKSNHAHILNISPPLNMNPIWFGNHVAYTMAKYGMSMCVLGM 181

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSL 300
           A E+   NIAVNALWPRTAIYTAA+EMLTG  +D    SRKPEIM+DAAY IL   P S 
Sbjct: 182 AREYASANIAVNALWPRTAIYTAAMEMLTGKESD--QYSRKPEIMSDAAYAILCKEPKST 239

Query: 301 TGQFLIDDEVLKAQHI-DLEQYSYVPNG--------------------AAEGSWHIDLKT 339
            G F IDDEVLKA  I D++QY+ VP                      AAEGS    LK 
Sbjct: 240 NGNFFIDDEVLKAAGISDMKQYACVPENADKLMPDFFLDTPPEQLVEFAAEGSHAASLKK 299

Query: 340 GSGSSGRGKPSSTVDATLTMTEKNFI----ALFEGKLK---------------------- 373
            + S   GK         ++  +  I    A+++  +K                      
Sbjct: 300 PAAS---GKIEGLFQKIESLLSEEIIKKTGAVYQFNVKGAEAGVWFADLKNAPGSVGKGE 356

Query: 374 -PTSA-------------FMTGKLK-----ISGNL------QKAMKLEKLMGALKSKL 406
            P +A               +GKLK     ++G L      QKAMKLEKLMG LKSKL
Sbjct: 357 PPATADATLTMDSKHFFDMFSGKLKPASAFMTGKLKISGDLQKAMKLEKLMGGLKSKL 414

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391336370|ref|XP_003742554.1| PREDICTED: hydroxysteroid dehydrogenase-like protein 2-like [Metaseiulus occidentalis]

 Score =  361 bits (927), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 211/466 (45%), Positives = 266/466 (57%), Gaps = 120/466 (25%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M+NTGKL+G TIFITGASRGIGK IALK AKDGANIV+AAKTA  +PKLPGTIY+AA+E+
Sbjct: 1   MLNTGKLAGRTIFITGASRGIGKEIALKCAKDGANIVVAAKTATANPKLPGTIYTAAEEI 60

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
           E AGG  L                                A  + + D AN         
Sbjct: 61  EKAGGKAL--------------------------------AVVMDVRDEAN--------- 79

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
                             +++ V  A DKFGGID L+NNASAI+LT T +T +K+YDLM+
Sbjct: 80  ------------------VKACVEQAADKFGGIDALINNASAINLTATEDTEIKRYDLMH 121

Query: 181 QINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG 239
           Q+N RGT++ S+ C+P+LK+S     I+N SPPL++NP WF  HVAYT++K+GMSMCALG
Sbjct: 122 QVNVRGTFIASKLCIPFLKQSKVGGKIINNSPPLSMNPRWFAPHVAYTMTKFGMSMCALG 181

Query: 240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPS 299
           MAEE K DNIAVN LWP+T+IYTAA  ML G    A+A SRKP IMADAAY ILS  P +
Sbjct: 182 MAEELKKDNIAVNTLWPKTSIYTAATAMLAGDDKVAQANSRKPSIMADAAYAILSK-PNT 240

Query: 300 LTGQFLIDDEVLKAQHI-DLEQYSYVP------------------------NGA------ 328
            TG F ID+EVL+ + I D +QY+ VP                        +GA      
Sbjct: 241 FTGNFCIDEEVLRGEGITDFDQYACVPGNEIMLDFFLPDKYYEGQNNVLDTSGATGAPSL 300

Query: 329 ------------------AEGSWHIDLKTG--------SGSSGRGK--PSSTVDATLTMT 360
                              +G +   +K G        +G+   GK  P+   D T    
Sbjct: 301 ERLFDKIKGLLNEELVSKTKGVFVFQIKEGGEFFIDMKNGAGATGKGAPAEKADVTFVAN 360

Query: 361 EKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL 406
           E   +++F GKLKPT+AFMTGKLKI G++ KAMKLEKLM  +K K+
Sbjct: 361 EDAMLSMFTGKLKPTAAFMTGKLKIKGDMGKAMKLEKLMSQMKGKM 406

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405963114|gb|EKC28714.1| Hydroxysteroid dehydrogenase-like protein 2 [Crassostrea gigas]

 Score =  346 bits (888), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 217/471 (46%), Positives = 263/471 (55%), Gaps = 131/471 (27%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G TIFITGASRGIGKAIALKAAKDGANI+IAAKT  PHPKLPGTIY+AAKEV      
Sbjct: 21  LAGKTIFITGASRGIGKAIALKAAKDGANIIIAAKTTTPHPKLPGTIYTAAKEV------ 74

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                     E A    +  AVD        + N  AI                      
Sbjct: 75  ----------EDAGGKCLACAVD--------IRNDGAI---------------------- 94

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                        QSA+  A DKFGGIDIL+NNASAISLT TA T  K++DLM  INARG
Sbjct: 95  -------------QSAMKEAADKFGGIDILINNASAISLTGTAATDPKRFDLMMGINARG 141

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
           TY+ S+  LPYL+KS++ HILNISPPLN+NP WFK+HVAYT++KYGMSMC LGM+EEFK 
Sbjct: 142 TYMCSKFALPYLQKSSNPHILNISPPLNMNPRWFKDHVAYTMAKYGMSMCVLGMSEEFKP 201

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI 306
            +IAVNALWPRTAIYTAA+EML GGS  A    RKPEIM+DAAY +L+      TG F I
Sbjct: 202 LSIAVNALWPRTAIYTAAMEMLGGGSEVAN-QCRKPEIMSDAAYVMLTRKSSEYTGNFAI 260

Query: 307 DDEVLKAQHI-DLEQYSYVPNGAAEGSWHIDLKT-----------------GSGS-SGRG 347
           DDEVL +  + DL+QY++VP       + +D +                  GSGS S  G
Sbjct: 261 DDEVLTSAGVTDLDQYAWVPGSTLLPDFFLDGEDPHKIRQQMEEKGATPAFGSGSKSAAG 320

Query: 348 KPSSTVDATLTMTEKNFIA----------------------------------------- 366
            P+ T  A   +  ++ ++                                         
Sbjct: 321 GPAQTFSAIEGLLSEDLVSSMNGVFQFNLTGPEEGVWFIDLKTGSGKLGQGEAPGGANCT 380

Query: 367 ----------LFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL-KSKL 406
                     +F+G+LK  SAFM+GKLKI G++  AMKLEKLM  + +SKL
Sbjct: 381 MTLDSEDFVKMFKGELKAVSAFMSGKLKIQGDMGLAMKLEKLMNKMDRSKL 431

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|58375839|ref|XP_307644.2| Anopheles gambiae str. PEST AGAP012513-PA [Anopheles gambiae str. PEST] gi|55246524|gb|EAA03441.3| AGAP012513-PA [Anopheles gambiae str. PEST]

 Score =  341 bits (875), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 187/341 (54%), Positives = 220/341 (64%), Gaps = 75/341 (21%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +++AV  AV KFGGIDI+VNNASAISLT T  T +K+YDLM+QIN RGT+LVS++C+PYL
Sbjct: 80  VRTAVQNAVAKFGGIDIVVNNASAISLTPTEQTEMKRYDLMHQINTRGTFLVSKECIPYL 139

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
           +KSNHAHILNISPPLN+ P WF NHVAYT++KYGMSMC LGMA+E +  NIAVNALWPRT
Sbjct: 140 RKSNHAHILNISPPLNMAPHWFSNHVAYTMAKYGMSMCVLGMAKELESANIAVNALWPRT 199

Query: 259 AIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI-D 317
           AI+TAA+EMLTG  +D    SRKPEIMADAAY ILS  P  +TG+FLIDDEVL+A+ I D
Sbjct: 200 AIHTAAMEMLTGKESD--QFSRKPEIMADAAYAILSKEPRLVTGKFLIDDEVLQAEGITD 257

Query: 318 LEQYSYVPNG--------------------AAEGSWHIDLKTGSGSS------------- 344
           L+QY+ VP                      AAEGS    LK  +G +             
Sbjct: 258 LKQYACVPENADKLMPDFFLDVEPEKLVEFAAEGSHAASLKKPAGEAAAGGKIEGLFQKI 317

Query: 345 ----------------------------------GRGK-----PSSTVDATLTMTEKNFI 365
                                             G GK     P +T DA LTM  K+F 
Sbjct: 318 ESLLSEEIVRKTGAVYEFKVKGEESGTWFADLKNGTGKVGKGNPPATADAVLTMDSKHFF 377

Query: 366 ALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL 406
            +F GKLKP +AFMTGKLKISG+LQKAMKLEKLMG LKSKL
Sbjct: 378 DMFTGKLKPANAFMTGKLKISGDLQKAMKLEKLMGGLKSKL 418

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195503710|ref|XP_002098766.1| GE23752 [Drosophila yakuba] gi|194184867|gb|EDW98478.1| GE23752 [Drosophila yakuba]

 Score =  341 bits (875), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/329 (56%), Positives = 218/329 (66%), Gaps = 62/329 (18%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           MINTGKL+G T+FITGASRGIGK IALKAA+DGANIV+AAKTAEPHPKLPGTIY+AA   
Sbjct: 1   MINTGKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYTAA--- 57

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                                    A ++K GG                     K Y   
Sbjct: 58  -------------------------AEIEKAGG---------------------KAYPC- 70

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
                    +V      +++SAV AAV KFGGIDI++NNASAISLT+T NT +K+YDLM+
Sbjct: 71  ---------VVDVRDEEQVRSAVEAAVAKFGGIDIVINNASAISLTNTPNTDMKRYDLMH 121

Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
            IN RGT+LVS+ CLPYLKKSNHAHILNISPPL++   WF  HVAYT++KYGMSMC LGM
Sbjct: 122 NINTRGTFLVSKVCLPYLKKSNHAHILNISPPLSMKAKWFGPHVAYTMAKYGMSMCVLGM 181

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSL 300
           A EFK   I+VNALWPRTAI+TAAIEMLTG   D+   SRKPEIMADAAY IL+  P   
Sbjct: 182 AAEFKDQGISVNALWPRTAIHTAAIEMLTG--PDSAQWSRKPEIMADAAYAILTREPRQS 239

Query: 301 TGQFLIDDEVLKAQHI-DLEQYSYVPNGA 328
           TGQF +DDEVL++  I DL  Y+ +   A
Sbjct: 240 TGQFFVDDEVLESAGITDLTDYACIRENA 268

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|324515893|gb|ADY46348.1| Hydroxysteroid dehydrogenase-like protein 2 [Ascaris suum]

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 200/472 (42%), Positives = 264/472 (55%), Gaps = 127/472 (26%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M+NTGK +G T+ I+GASRGIGK IALK AKDGANIV+AAKTA+PHPKLPGTIYSA +E+
Sbjct: 1   MLNTGKFAGKTVVISGASRGIGKEIALKLAKDGANIVVAAKTAKPHPKLPGTIYSAVEEI 60

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
           E                            K GG  +    A  + + D A+         
Sbjct: 61  E----------------------------KVGGRGL----ACVVDVRDEAS--------- 79

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
                             ++ A++  V KFGG+DILVNNASAISLT T  T +K+YDLM+
Sbjct: 80  ------------------VEKAIDDTVHKFGGVDILVNNASAISLTGTLETSMKRYDLMH 121

Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
            IN RGT+L+SQKC+PYLK++ + HILNISPPL +   WF NHVAYT++KYGMSMC LGM
Sbjct: 122 NINTRGTFLMSQKCIPYLKQAKNPHILNISPPLLMEKKWFANHVAYTMAKYGMSMCVLGM 181

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSL 300
            EE + D IAVNALWPRTAI+TAA++ML+GG  +     RKP IMADAAY +LS N    
Sbjct: 182 HEELRPDRIAVNALWPRTAIWTAAMDMLSGGMGEKGC--RKPSIMADAAYALLSRNSREF 239

Query: 301 TGQFLIDDEVLKAQHI-DLEQYS-----------YVP-------NGAAE----------- 330
           TG F+ID+++L+ + + D ++Y+           +VP       +GA+            
Sbjct: 240 TGNFVIDEDILREEGVRDFDKYAIDPSAQLTPDFFVPGAEDVISSGASSKREESRKMMKE 299

Query: 331 -----------------------GSWHIDLKTGSGSS--------GRGKPS----STVDA 355
                                    +   LK+GSG S        G G+       + D 
Sbjct: 300 SDVRTVLENARKIINAEMVSKVGAVFQFALKSGSGVSEVFFDLKNGDGRVEEGRVESADV 359

Query: 356 TLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL-KSKL 406
              +   NF  LF G+L  T AFM+G+LKI+G++ KA+KLE ++  + KSKL
Sbjct: 360 YFELDASNFGKLFNGELSATKAFMSGQLKITGDMNKALKLEGMLNKMNKSKL 411

Source: Ascaris suum

Species: Ascaris suum

Genus: Ascaris

Family: Ascarididae

Order: Ascaridida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|320164357|gb|EFW41256.1| SCP2 sterol transfer family protein [Capsaspora owczarzaki ATCC 30864]

 Score =  338 bits (866), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 187/326 (57%), Positives = 212/326 (65%), Gaps = 64/326 (19%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           NTG L G+TIFITGASRGIGKAIALKAA+DGANIVIAAKT  PHPKLPGTIY+AA+E+  
Sbjct: 6   NTGALKGVTIFITGASRGIGKAIALKAARDGANIVIAAKTTVPHPKLPGTIYTAAEEIVA 65

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
           AGG  LPC                AVD                        L+  D +N+
Sbjct: 66  AGGQALPC----------------AVD------------------------LRNDDQLNE 85

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 182
                              AV  AV KFGGIDILVNNASAISLT TA TPLKK+DLMN +
Sbjct: 86  -------------------AVKQAVAKFGGIDILVNNASAISLTGTAETPLKKFDLMNGV 126

Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
           NARGTY  SQ CLPYLKKS + HILNISPPLN+ P WFKNHVAYT++KYGMSMC LGM+E
Sbjct: 127 NARGTYSASQACLPYLKKSKNPHILNISPPLNMRPKWFKNHVAYTMAKYGMSMCVLGMSE 186

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNP--PSL 300
           EF  D IAVNALWP+TAI TAA++ML GG AD     R   IM+DAAY IL+ N    S 
Sbjct: 187 EFHDDGIAVNALWPQTAISTAAMDMLAGGEAD--KVCRNTHIMSDAAYVILTQNSRQASN 244

Query: 301 TGQFLIDDEVLKAQHI-DLEQYSYVP 325
           TG F ID+ VL+   I + +QY+ VP
Sbjct: 245 TGNFYIDEAVLQRAGIKNFDQYACVP 270

Source: Capsaspora owczarzaki ATCC 30864

Species: Capsaspora owczarzaki

Genus: Capsaspora

Class: Ichthyosporea

Superkingdom: Eukaryota

>gi|324506424|gb|ADY42744.1| Hydroxysteroid dehydrogenase-like protein 2 [Ascaris suum]

 Score =  333 bits (855), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 198/469 (42%), Positives = 261/469 (55%), Gaps = 127/469 (27%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           TGK +G T+ I+GASRGIGK IALK AKDGANIV+AAKTA+PHPKLPGTIYSA +E+E  
Sbjct: 2   TGKFAGKTVVISGASRGIGKEIALKLAKDGANIVVAAKTAKPHPKLPGTIYSAVEEIE-- 59

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                                     K GG  +    A  + + D A+            
Sbjct: 60  --------------------------KVGGRGL----ACVVDVRDEAS------------ 77

Query: 124 NARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
                          ++ A++  V KFGG+DILVNNASAISLT T  T +K+YDLM+ IN
Sbjct: 78  ---------------VEKAIDDTVHKFGGVDILVNNASAISLTGTLETSMKRYDLMHNIN 122

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
            RGT+L+SQKC+PYLK++ + HILNISPPL +   WF NHVAYT++KYGMSMC LGM EE
Sbjct: 123 TRGTFLMSQKCIPYLKQAKNPHILNISPPLLMEKKWFANHVAYTMAKYGMSMCVLGMHEE 182

Query: 244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQ 303
            + D IAVNALWPRTAI+TAA++ML+GG  +     RKP IMADAAY +LS N    TG 
Sbjct: 183 LRPDRIAVNALWPRTAIWTAAMDMLSGGMGEKGC--RKPSIMADAAYALLSRNSREFTGN 240

Query: 304 FLIDDEVLKAQHI-DLEQYS-----------YVP-------NGAAE-------------- 330
           F+ID+++L+ + + D ++Y+           +VP       +GA+               
Sbjct: 241 FVIDEDILREEGVRDFDKYAIDPSAQLTPDFFVPGAEDVISSGASSKREESRKMMKESDV 300

Query: 331 --------------------GSWHIDLKTGSGSS--------GRGKPS----STVDATLT 358
                                 +   LK+GSG S        G G+       + D    
Sbjct: 301 RTVLENARKIVNAEMVSKVGAVFQFALKSGSGVSEVFFDLKNGDGRVEEGRVESADVYFE 360

Query: 359 MTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL-KSKL 406
           +   NF  LF G+L  T AFM+G+LKI+G++ KA+KLE ++  + KSKL
Sbjct: 361 LDASNFGKLFNGELSATKAFMSGQLKITGDMNKALKLEGMLNKMNKSKL 409

Source: Ascaris suum

Species: Ascaris suum

Genus: Ascaris

Family: Ascarididae

Order: Ascaridida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
FB|FBgn0039537	412	CG5590 [Drosophila melanogaste	0.450	0.444	0.688	2.7e-86
UNIPROTKB|A4FUZ6	418	HSDL2 "Hydroxysteroid dehydrog	0.453	0.440	0.661	4.1e-79
UNIPROTKB|F1MF48	418	HSDL2 "Hydroxysteroid dehydrog	0.453	0.440	0.661	4.1e-79
RGD|1305387	524	Hsdl2 "hydroxysteroid dehydrog	0.453	0.351	0.634	2.5e-77
UNIPROTKB|Q4V8F9	524	Hsdl2 "Hydroxysteroid dehydrog	0.453	0.351	0.634	2.5e-77
MGI|MGI:1919729	490	Hsdl2 "hydroxysteroid dehydrog	0.504	0.418	0.593	1.1e-76
UNIPROTKB|F1Q3R2	418	HSDL2 "Uncharacterized protein	0.453	0.440	0.634	1.1e-76
UNIPROTKB|F1LRD0	518	Hsdl2 "Hydroxysteroid dehydrog	0.453	0.355	0.634	4.6e-76
UNIPROTKB|F1SNA8	418	HSDL2 "Uncharacterized protein	0.453	0.440	0.640	4.6e-76
ZFIN|ZDB-GENE-030131-1066	415	hsdl2 "hydroxysteroid dehydrog	0.453	0.443	0.656	1.6e-75

FB|FBgn0039537 CG5590 [Drosophila melanogaster (taxid:7227)]

 Score = 655 (235.6 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
 Identities = 128/186 (68%), Positives = 154/186 (82%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +++SAV AAV KFGGIDI++NNASAISLT+T +T +K+YDLM+ IN RGT+LVS+ CLPY
Sbjct:    79 QVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRGTFLVSKVCLPY 138

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKSNHAHILNISPPL++ P WF  HVAYT++KYGMSMC LGMA EFK + I+VNALWPR
Sbjct:   139 LKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVNALWPR 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAAIEMLTG   D+   SRKPEIMADAAY IL+  P   TGQF +DDEVL++  I 
Sbjct:   199 TAIHTAAIEMLTG--PDSAKWSRKPEIMADAAYAILTREPRQSTGQFFVDDEVLESAGIT 256

Query:   317 DLEQYS 322
             DL +Y+
Sbjct:   257 DLTEYA 262

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB|A4FUZ6 HSDL2 "Hydroxysteroid dehydrogenase-like protein 2" [Bos taurus (taxid:9913)]

 Score = 620 (223.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
 Identities = 125/189 (66%), Positives = 147/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I SAV  AV+KFGGIDILVNNASAISLT+T  TP KK DLM  +N RGTYL S+ C+PY
Sbjct:    80 QISSAVEKAVEKFGGIDILVNNASAISLTNTLETPTKKVDLMMNVNTRGTYLTSKACIPY 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEFKG+ IAVNALWPR
Sbjct:   140 LKKSKVAHILNLSPPLNLNPLWFKQHCAYTIAKYGMSMCVLGMAEEFKGE-IAVNALWPR 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAA++ML GGS   ++  RK +IMADAAY I    P S TG F+ID+ +LK + I 
Sbjct:   199 TAIHTAAMDML-GGSG-VESQCRKVDIMADAAYCIFKK-PKSFTGNFIIDENILKEEGIK 255

Query:   317 DLEQYSYVP 325
             + + Y+  P
Sbjct:   256 NFDVYAITP 264

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1MF48 HSDL2 "Hydroxysteroid dehydrogenase-like protein 2" [Bos taurus (taxid:9913)]

 Score = 620 (223.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
 Identities = 125/189 (66%), Positives = 147/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I SAV  AV+KFGGIDILVNNASAISLT+T  TP KK DLM  +N RGTYL S+ C+PY
Sbjct:    80 QISSAVEKAVEKFGGIDILVNNASAISLTNTLETPTKKVDLMMNVNTRGTYLTSKACIPY 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEFKG+ IAVNALWPR
Sbjct:   140 LKKSKVAHILNLSPPLNLNPLWFKQHCAYTIAKYGMSMCVLGMAEEFKGE-IAVNALWPR 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAA++ML GGS   ++  RK +IMADAAY I    P S TG F+ID+ +LK + I 
Sbjct:   199 TAIHTAAMDML-GGSG-VESQCRKVDIMADAAYCIFKK-PKSFTGNFIIDENILKEEGIK 255

Query:   317 DLEQYSYVP 325
             + + Y+  P
Sbjct:   256 NFDVYAITP 264

GO:0032934 "sterol binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1305387 Hsdl2 "hydroxysteroid dehydrogenase like 2" [Rattus norvegicus (taxid:10116)]

 Score = 607 (218.7 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
 Identities = 120/189 (63%), Positives = 146/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I SAV  AV++FGGIDILVNNASAISLT+T  TP K+ DLM  +N RGTYL S+ C+P+
Sbjct:    80 QINSAVEKAVERFGGIDILVNNASAISLTNTLETPTKRVDLMMSVNTRGTYLTSKACIPF 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEF+G+ IAVNALWPR
Sbjct:   140 LKKSKVAHILNLSPPLNLNPMWFKQHCAYTIAKYGMSMCVLGMAEEFRGE-IAVNALWPR 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAA++ML  G A  ++  RK +I+ADAAY I    P S TG F+ID+ +LK + I 
Sbjct:   199 TAIHTAAMDML--GGAGVESQCRKVDIIADAAYSIFK-RPKSFTGNFIIDENILKEEGIK 255

Query:   317 DLEQYSYVP 325
             D + Y+  P
Sbjct:   256 DFDIYAITP 264

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

UNIPROTKB|Q4V8F9 Hsdl2 "Hydroxysteroid dehydrogenase-like protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 607 (218.7 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
 Identities = 120/189 (63%), Positives = 146/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I SAV  AV++FGGIDILVNNASAISLT+T  TP K+ DLM  +N RGTYL S+ C+P+
Sbjct:    80 QINSAVEKAVERFGGIDILVNNASAISLTNTLETPTKRVDLMMSVNTRGTYLTSKACIPF 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEF+G+ IAVNALWPR
Sbjct:   140 LKKSKVAHILNLSPPLNLNPMWFKQHCAYTIAKYGMSMCVLGMAEEFRGE-IAVNALWPR 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAA++ML  G A  ++  RK +I+ADAAY I    P S TG F+ID+ +LK + I 
Sbjct:   199 TAIHTAAMDML--GGAGVESQCRKVDIIADAAYSIFK-RPKSFTGNFIIDENILKEEGIK 255

Query:   317 DLEQYSYVP 325
             D + Y+  P
Sbjct:   256 DFDIYAITP 264

GO:0000166 "nucleotide binding" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

MGI|MGI:1919729 Hsdl2 "hydroxysteroid dehydrogenase like 2" [Mus musculus (taxid:10090)]

 Score = 602 (217.0 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
 Identities = 127/214 (59%), Positives = 154/214 (71%)

Query:   117 YDLMNQINARG-TYL---VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTP 172
             Y    +I A G T L   V      +I SAV  AV+KFGGIDILVNNASAISLT+T +TP
Sbjct:    55 YTAAEEIEAAGGTALPCVVDVRDEQQINSAVEKAVEKFGGIDILVNNASAISLTNTLDTP 114

Query:   173 LKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYG 232
              K+ DLM  +N RGTYL S+ C+P+LKKS   HILN+SPPLNLNP WFK H AYTI+KYG
Sbjct:   115 TKRVDLMMNVNTRGTYLTSKACIPFLKKSKVGHILNLSPPLNLNPLWFKQHCAYTIAKYG 174

Query:   233 MSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYI 292
             MSMC LGMAEEF+G+ IAVNALWPRTAI+TAA++ML GGS   +   RK +I+ADAAY I
Sbjct:   175 MSMCVLGMAEEFRGE-IAVNALWPRTAIHTAAMDML-GGSG-VENQCRKVDIIADAAYSI 231

Query:   293 LSSNPPSLTGQFLIDDEVLKAQHI-DLEQYSYVP 325
                 P S TG F+ID+ +LK + I + + Y+  P
Sbjct:   232 FK-RPKSFTGNFIIDENILKEEGIKNFDVYAIAP 264

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1Q3R2 HSDL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 600 (216.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
 Identities = 120/189 (63%), Positives = 147/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I +AV  AV++FGGIDILVNNASAISLT+T  TP K+ DLM  +N RGTYL S+ C+PY
Sbjct:    80 QISNAVEKAVERFGGIDILVNNASAISLTNTLETPTKRVDLMMNVNTRGTYLTSKACIPY 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEFKG+ IAVNALWP+
Sbjct:   140 LKKSKIAHILNLSPPLNLNPMWFKQHCAYTIAKYGMSMCVLGMAEEFKGE-IAVNALWPK 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAA++ML GGS   ++  RK EI+ADAAY I    P S TG F+ID+ +L+ + I 
Sbjct:   199 TAIHTAAMDML-GGSG-IESQCRKVEIIADAAYSIFK-RPKSFTGNFIIDENILREEGIK 255

Query:   317 DLEQYSYVP 325
             + + Y+  P
Sbjct:   256 NFDIYAIKP 264

GO:0032934 "sterol binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1LRD0 Hsdl2 "Hydroxysteroid dehydrogenase-like protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 607 (218.7 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
 Identities = 120/189 (63%), Positives = 146/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I SAV  AV++FGGIDILVNNASAISLT+T  TP K+ DLM  +N RGTYL S+ C+P+
Sbjct:    80 QINSAVEKAVERFGGIDILVNNASAISLTNTLETPTKRVDLMMSVNTRGTYLTSKACIPF 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEF+G+ IAVNALWPR
Sbjct:   140 LKKSKVAHILNLSPPLNLNPMWFKQHCAYTIAKYGMSMCVLGMAEEFRGE-IAVNALWPR 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAA++ML  G A  ++  RK +I+ADAAY I    P S TG F+ID+ +LK + I 
Sbjct:   199 TAIHTAAMDML--GGAGVESQCRKVDIIADAAYSIFK-RPKSFTGNFIIDENILKEEGIK 255

Query:   317 DLEQYSYVP 325
             D + Y+  P
Sbjct:   256 DFDIYAITP 264

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

UNIPROTKB|F1SNA8 HSDL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 605 (218.0 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
 Identities = 121/189 (64%), Positives = 146/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I  AV  AV+KFGGIDILVNNASAISLT+T  TP K+ DLM  +N RGTYL S+ C+PY
Sbjct:    80 QISDAVEKAVEKFGGIDILVNNASAISLTNTLETPTKRVDLMMNVNTRGTYLTSKACIPY 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             LKKS  AHILN+SPPLNLNP WFK H AYTI+KYGMSMC LGMAEEFKG+ IAVNALWP+
Sbjct:   140 LKKSRIAHILNLSPPLNLNPLWFKQHCAYTIAKYGMSMCVLGMAEEFKGE-IAVNALWPK 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI+TAA++ML GGS   ++  RK +I+ADAAY I    P S TG F+ID+ +LK + I 
Sbjct:   199 TAIHTAAMDML-GGSG-IESQCRKVDIIADAAYCIFKK-PKSFTGNFIIDENILKEEGIT 255

Query:   317 DLEQYSYVP 325
             + + Y+  P
Sbjct:   256 NFDVYAVTP 264

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-030131-1066 hsdl2 "hydroxysteroid dehydrogenase like 2" [Danio rerio (taxid:7955)]

 Score = 604 (217.7 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
 Identities = 124/189 (65%), Positives = 146/189 (77%)

Query:   138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +I  AV  AV+KFGGIDILVNNASAI+LT T  TP+KK DLM  IN RGTYL S+ C+P+
Sbjct:    80 QINDAVEQAVEKFGGIDILVNNASAINLTGTLQTPMKKADLMLGINLRGTYLTSKLCIPH 139

Query:   198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
             L KS + HILN+SPPLNLNP WFKNH AYTI+KYGMSMC LGMAEEF+G +IAVNALWP+
Sbjct:   140 LLKSKNPHILNLSPPLNLNPIWFKNHTAYTIAKYGMSMCVLGMAEEFRG-SIAVNALWPK 198

Query:   258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
             TAI TAA++ML GGS   K   RK EIMADAAY I    P S TGQF+ID+++LK + I 
Sbjct:   199 TAIQTAAMDML-GGSEVGKQC-RKVEIMADAAYAIFKQ-PTSFTGQFVIDEDILKKEGIK 255

Query:   317 DLEQYSYVP 325
             D + Y+  P
Sbjct:   256 DFDVYAVEP 264

GO:0000166 "nucleotide binding" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q4V8F9	HSDL2_RAT	1, ., -, ., -, ., -	0.6349	0.4532	0.3511	yes	N/A
Q5RA68	HSDL2_PONAB	1, ., -, ., -, ., -	0.5721	0.5	0.4856	yes	N/A
Q6P5L8	HSDL2_DANRE	1, ., -, ., -, ., -	0.6560	0.4532	0.4433	yes	N/A
A4FUZ6	HSDL2_BOVIN	1, ., -, ., -, ., -	0.5370	0.6403	0.6220	yes	N/A
Q2TPA8	HSDL2_MOUSE	1, ., -, ., -, ., -	0.5154	0.6403	0.5306	yes	N/A
Q6YN16	HSDL2_HUMAN	1, ., -, ., -, ., -	0.5769	0.5	0.4856	yes	N/A
Q66KC4	HSDL2_XENTR	1, ., -, ., -, ., -	0.6719	0.4532	0.4412	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	406
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-106
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-100
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	9e-80
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-78
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	8e-78
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-31
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-27
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-26
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-26
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-23
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-23
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	9e-23
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-22
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-21
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-21
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	3e-21
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-21
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-21
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	6e-21
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	8e-21
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-20
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-20
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-20
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	5e-20
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	7e-20
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-19
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-19
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	5e-19
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-19
pfam02036	100	pfam02036, SCP2, SCP-2 sterol transfer family	1e-18
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-18
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-18
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	3e-18
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-18
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-18
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-18
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	5e-18
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-17
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	5e-17
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-17
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	6e-17
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	6e-17
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-16
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-16
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-16
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-16
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-16
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-16
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-16
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	6e-16
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-16
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-15
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-15
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-15
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-15
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-15
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-15
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-15
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-15
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	6e-15
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-15
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	8e-15
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	8e-15
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	9e-15
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-14
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-14
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-14
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-14
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-14
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-14
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-14
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-14
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-14
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-14
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	5e-14
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-14
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	5e-14
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-14
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	7e-14
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	7e-14
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	9e-14
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	9e-14
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-13
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-13
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-13
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-13
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-13
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-13
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-13
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-13
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-13
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-13
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	6e-13
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	6e-13
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	8e-13
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	9e-13
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-12
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-12
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-12
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-12
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-12
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-12
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-12
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-12
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-12
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-12
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-12
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-12
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	9e-12
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-11
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-11
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-11
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-11
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-11
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-11
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-11
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-11
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-11
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-11
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-11
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-11
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-11
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-11
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	4e-11
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	4e-11
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	5e-11
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-11
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	6e-11
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	6e-11
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	7e-11
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	8e-11
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	9e-11
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	9e-11
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-10
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-10
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-10
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-10
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-10
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-10
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-10
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-10
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-10
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-10
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-10
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-10
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-10
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-10
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-10
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-10
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-10
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	4e-10
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-10
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	5e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-10
COG3255	134	COG3255, COG3255, Putative sterol carrier protein	7e-10
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	7e-10
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	9e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-09
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-09
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-09
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-09
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-09
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-09
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-09
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-09
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-09
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-09
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-09
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-09
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-09
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-09
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	4e-09
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-09
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	6e-09
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	6e-09
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	6e-09
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	7e-09
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	7e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-09
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-08
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-08
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-08
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-08
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-08
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-08
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-08
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-08
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-08
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-08
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-08
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-08
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	4e-08
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	4e-08
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-08
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	5e-08
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	5e-08
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	6e-08
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	6e-08
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-08
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-08
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	7e-08
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	8e-08
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	8e-08
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	9e-08
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	9e-08
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	9e-08
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	9e-08
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-07
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-07
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-07
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-07
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-07
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-07
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-07
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-07
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-07
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-07
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	3e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-07
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	5e-07
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	7e-07
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	9e-07
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	9e-07
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-06
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-06
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-06
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-06
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-06
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-06
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-06
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-06
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-06
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	2e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	2e-06
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-06
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-06
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-06
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-06
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-06
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-06
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-06
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-06
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	4e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	5e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	5e-06
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-06
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	6e-06
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-06
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	7e-06
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	8e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	8e-06
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	9e-06
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	9e-06
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	9e-06
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-05
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-05
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-05
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-05
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-05
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-05
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-05
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-05
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-05
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-05
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-05
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-05
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-05
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-05
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	3e-05
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	3e-05
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	3e-05
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-05
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-05
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	9e-05
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-04
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	1e-04
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-04
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-04
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	1e-04
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-04
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-04
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-04
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-04
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	3e-04
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-04
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	5e-04
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	6e-04
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	6e-04
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	7e-04
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	9e-04
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	0.001
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	0.001
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	0.001
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	0.001
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	0.001
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	0.001
pfam08659	181	pfam08659, KR, KR domain	0.001
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	0.002
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	0.002
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	0.002
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	0.002
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	0.003
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	0.003
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	0.004
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	0.004
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	0.004
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	0.004
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score =  315 bits (809), Expect = e-106
 Identities = 115/191 (60%), Positives = 141/191 (73%), Gaps = 2/191 (1%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           + +AV  AV++FGGIDI VNNASAI+LT T +TP+K++DLM QIN RGT+LVSQ CLP+L
Sbjct: 77  VAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHL 136

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
           KKS + HIL +SPPLNL+P WF  H AYT++KYGMS+C LG+AEEF+ D IAVNALWPRT
Sbjct: 137 KKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196

Query: 259 AIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI-D 317
            I TAA+  L GG    +  SR PEIMADAAY ILS      TG FLID+EVL+   + D
Sbjct: 197 TIATAAVRNLLGGDEAMRR-SRTPEIMADAAYEILSRPAREFTGNFLIDEEVLREAGVTD 255

Query: 318 LEQYSYVPNGA 328
             +Y+  P   
Sbjct: 256 FSRYAVDPGAP 266

Length = 273

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  296 bits (760), Expect = e-100
 Identities = 121/173 (69%), Positives = 138/173 (79%), Gaps = 2/173 (1%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++++AV  AV+KFGGIDILVNNASAISLT T +TP+K+YDLM  +N RGTYL S+ CLPY
Sbjct: 73  QVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTYLCSKACLPY 132

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           LKKS + HILN+SPPLNLNP WFKNH AYT++KYGMSMC LGMAEEFK   IAVNALWPR
Sbjct: 133 LKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLGMAEEFKPGGIAVNALWPR 192

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV 310
           TAI TAA+ ML G   D  A  RKPEIMADAAY IL+      TG FLID+EV
Sbjct: 193 TAIATAAMNMLGGV--DVAACCRKPEIMADAAYAILTKPSSEFTGNFLIDEEV 243

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  245 bits (628), Expect = 9e-80
 Identities = 116/304 (38%), Positives = 153/304 (50%), Gaps = 58/304 (19%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG   F+TGASRGIG+AIAL+ AK GA +                   AAK   +    
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATV-----------------VVAAKTASEGDNG 43

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                        ++      ++  GG       A  I                  ++ R
Sbjct: 44  SAK-----SLPGTIEETA-EEIEAAGG------QALPI-----------------VVDVR 74

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                   Q   +++ V A VD+FG +DILVNNA AI L+   +TP K++DLM ++N RG
Sbjct: 75  -----DEDQ---VRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVNLRG 126

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
           TYL+SQ  LP++ K+   HILNISPPL+L P      VAY   K GMS   LG+A E + 
Sbjct: 127 TYLLSQAALPHMVKAGQGHILNISPPLSLRPARG--DVAYAAGKAGMSRLTLGLAAELRR 184

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI 306
             IAVN+LWP TAI T A   L+GGS  A+A  R PEI++DA   ILS      TG  +I
Sbjct: 185 HGIAVNSLWPSTAIETPAATELSGGSDPARA--RSPEILSDAVLAILSRPAAERTGLVVI 242

Query: 307 DDEV 310
           D+E+
Sbjct: 243 DEEL 246

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score =  242 bits (621), Expect = 2e-78
 Identities = 90/125 (72%), Positives = 108/125 (86%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG T+FITGASRGIG AIAL+AA+DGANIVIAAKTAEPHPKLPGTI++AA+E+E AGG 
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            LP + D+RDE  V +AV  AV++FGGIDI VNNASAI+LT T +TP+K++DLM QIN R
Sbjct: 64  ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVR 123

Query: 127 GTYLV 131
           GT+LV
Sbjct: 124 GTFLV 128

Length = 273

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  240 bits (614), Expect = 8e-78
 Identities = 97/125 (77%), Positives = 111/125 (88%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G T+FITGASRGIGKAIALKAA+DGAN+VIAAKTAEPHPKLPGTIY+AA+E+E AGG 
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            LPCIVDIRDE  V++AV  AV+KFGGIDILVNNASAISLT T +TP+K+YDLM  +N R
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTR 120

Query: 127 GTYLV 131
           GTYL 
Sbjct: 121 GTYLC 125

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  120 bits (302), Expect = 1e-31
 Identities = 79/312 (25%), Positives = 114/312 (36%), Gaps = 79/312 (25%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
             LSG    +TGAS GIG+AIA   A++GA +V+AA                        
Sbjct: 1   MDLSGKVALVTGASSGIGRAIARALAREGARVVVAA------------------------ 36

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                      +E A ++   A  +  GG    V    A  ++D                
Sbjct: 37  --------RRSEEEAAEALAAAIKEAGGGRAAAV----AADVSDDEE------------- 71

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQIN 183
                         +++ V AA ++FG IDILVNNA  A           + +D +  +N
Sbjct: 72  -------------SVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVN 118

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
             G +L+++  LP +KK     I+NIS    L         AY  SK  +      +A E
Sbjct: 119 LLGAFLLTRAALPLMKK---QRIVNISSVAGLGGPP--GQAAYAASKAALIGLTKALALE 173

Query: 244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILS 294
                I VNA+ P   I T     L     +A               PE +A A  ++ S
Sbjct: 174 LAPRGIRVNAVAP-GYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLAS 232

Query: 295 SNPPS-LTGQFL 305
               S +TGQ L
Sbjct: 233 DEAASYITGQTL 244

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  108 bits (271), Expect = 2e-27
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 10/178 (5%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++++ V  A+++FG +DILVNNA             + +D +  +N  G +L+++  LP+
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           +KK     I+NIS    L P       AY  SK  +      +A E     I VNA+ P 
Sbjct: 120 MKKQGGGRIVNISSVAGLRP--LPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAP- 176

Query: 258 TAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
             + T  +  L    A+ +  +         PE +A+A  ++ S     +TGQ +  D
Sbjct: 177 GLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  106 bits (266), Expect = 1e-26
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 8/120 (6%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
             +TGAS GIG+AIA + A++GA +V+A +  E          +    +E  GGN +   
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEAL--------AELAAIEALGGNAVAVQ 52

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
            D+ DE  V++ V  A+++FG +DILVNNA             + +D +  +N  G +L+
Sbjct: 53  ADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLL 112

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  105 bits (265), Expect = 3e-26
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 16/131 (12%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G    +TGASRGIG+AIA + A  GAN+VI   ++E   +      +   E+   GG
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAE------ALVAEIGALGG 55

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL-----M 120
             L    D+ D  +V+ AV+ A  +FGG+DILVNNA  I    T +  L +        +
Sbjct: 56  KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNA-GI----TRDNLLMRMKEEDWDRV 110

Query: 121 NQINARGTYLV 131
              N  G + +
Sbjct: 111 IDTNLTGVFNL 121

Length = 248

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 96.8 bits (242), Expect = 4e-23
 Identities = 82/313 (26%), Positives = 123/313 (39%), Gaps = 80/313 (25%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            KL G    +TGAS GIG+AIA   AK+GA +VIA    E             +E+++ G
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE------EAAQELLEEIKEEG 54

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           G+ +    D+  E  V++ V   V+KFG IDILVN                         
Sbjct: 55  GDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVN------------------------- 89

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                              NA +  FG +                +   +++D +  +N 
Sbjct: 90  -------------------NAGISNFGLV---------------TDMTDEEWDRVIDVNL 115

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
            G  L+++  LPY+ K     I+NIS    L        V Y+ SK  ++     +A+E 
Sbjct: 116 TGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG--ASCEVLYSASKGAVNAFTKALAKEL 173

Query: 245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILSS 295
               I VNA+ P  AI T   EM +  S + K             KPE +A    ++ S 
Sbjct: 174 APSGIRVNAVAP-GAIDT---EMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASD 229

Query: 296 NPPSLTGQFLIDD 308
           +   +TGQ +  D
Sbjct: 230 DASYITGQIITVD 242

Length = 247

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 96.2 bits (240), Expect = 7e-23
 Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 7/129 (5%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
               L+G    +TGA+RG+G A A   A+ GA +      A    +L       A  +E 
Sbjct: 1   MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEAREL-------AAALEA 53

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
           AGG       D+ D  +VQ   +AA    GG+D LVNNA   +        +  +D +  
Sbjct: 54  AGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMN 113

Query: 123 INARGTYLV 131
           +N RGT+L+
Sbjct: 114 VNVRGTFLM 122

Length = 250

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 96.4 bits (240), Expect = 9e-23
 Identities = 79/313 (25%), Positives = 122/313 (38%), Gaps = 78/313 (24%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG    +TGASRGIG+ IAL+  + GA + I  +T    P+LPGT     +E+E  GG 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRT--ILPQLPGTA----EEIEARGGK 54

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKF--GGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           C+P   D  D+  V+ A+   V +   G +DILVNNA                       
Sbjct: 55  CIPVRCDHSDDDEVE-ALFERVAREQQGRLDILVNNA----------------------- 90

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                                    +  + +++   +          P   +D +N +  
Sbjct: 91  -------------------------YAAVQLILVGVA----KPFWEEPPTIWDDINNVGL 121

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKN--HVAYTISKYGMSMCALGMAE 242
           R  Y  S    P + K+    I+ IS     +    +   +VAY + K  +   A  MA 
Sbjct: 122 RAHYACSVYAAPLMVKAGKGLIVIIS-----STGGLEYLFNVAYGVGKAAIDRMAADMAH 176

Query: 243 EFKGDNIAVNALWPRTAIYTAAI-EMLTGGSADAKATSRKPEIMADAAYYI------LSS 295
           E K   +AV +LWP   + T  + EM         A  R   +  +   Y       L++
Sbjct: 177 ELKPHGVAVVSLWP-GFVRTELVLEMPEDDEGSWHAKERDAFLNGETTEYSGRCVVALAA 235

Query: 296 NPP--SLTGQFLI 306
           +P    L+G+ LI
Sbjct: 236 DPDLMELSGRVLI 248

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 94.1 bits (235), Expect = 4e-22
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 7/96 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G T  +TGASRGIG+AIAL+ A DGA +VI     E          + A E+  AGG
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEE-------AAEALAAELRAAGG 54

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                + D+ DE AV++ + AAV+ FG +DILVNNA
Sbjct: 55  EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNA 90

Length = 246

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 92.0 bits (229), Expect = 2e-21
 Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 7/125 (5%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGASRGIG  IA   A+ GANIVI ++  E           A + +E  G  
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEE-------KAEEAQQLIEKEGVE 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                 D+ DE A+++AV A  + FG IDILVNNA  I        P  ++  +  +N  
Sbjct: 56  ATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLN 115

Query: 127 GTYLV 131
           G + V
Sbjct: 116 GVFFV 120

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 91.9 bits (229), Expect = 2e-21
 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 8/126 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G   FITG   GIGKAIA   A+ GA++ IA +  E        + +AA+E+  A G 
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEV-------LEAAAEEISSATGG 53

Query: 67  -CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
              P   D+RD  AV++AV+  + +FG IDIL+NNA+   L    +     +  +  I+ 
Sbjct: 54  RAHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDL 113

Query: 126 RGTYLV 131
            GT+  
Sbjct: 114 NGTFNT 119

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 91.6 bits (228), Expect = 3e-21
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 16/157 (10%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  + ++G   G+G+ +A++AA+ GA++V+AA+TAE   +L       A E++D G  
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAE---RLD----EVAAEIDDLGRR 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINA 125
            L    DI DE    + V  A+++FG +D LVNNA  + S+   A+     +  + ++N 
Sbjct: 56  ALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNV 115

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
            GT        L +  A   A+ + GG  +++N+   
Sbjct: 116 LGT--------LRLTQAFTPALAESGGSIVMINSMVL 144

Length = 258

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 90.9 bits (226), Expect = 4e-21
 Identities = 76/296 (25%), Positives = 116/296 (39%), Gaps = 80/296 (27%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    ITGA RGIG+A+A+  AK+G N+ + A+T E        + + A+EVE  G  
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEE-------NLKAVAEEVEAYGVK 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D+ D   V +A+    ++ G IDIL+NN                          
Sbjct: 58  VVIATADVSDYEEVTAAIEQLKNELGSIDILINN-------------------------- 91

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                             A + KFG    L                  +++ + Q+N  G
Sbjct: 92  ------------------AGISKFGKFLEL---------------DPAEWEKIIQVNLMG 118

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE---- 242
            Y  ++  LP + +     I+NIS              AY+ SK+G+    LG+ E    
Sbjct: 119 VYYATRAVLPSMIERQSGDIINISSTAGQKG--AAVTSAYSASKFGV----LGLTESLMQ 172

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEM-LTGGSADAKATSRKPEIMADAAYYILSSNP 297
           E +  NI V AL P T     A+++ LT G+ D      +PE +A+     L  N 
Sbjct: 173 EVRKHNIRVTALTPSTVATDMAVDLGLTDGNPD---KVMQPEDLAEFIVAQLKLNK 225

Length = 239

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 91.5 bits (228), Expect = 4e-21
 Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 7/125 (5%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G    +TGA+ GIG  IAL  AK+GA +VIA    E           AA+ ++ AGG
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAA-------AAEALQKAGG 53

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             +   +D+ DE A+ + ++ AV+ FGG+DILVNNA    +    + P +K+  M  I  
Sbjct: 54  KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIML 113

Query: 126 RGTYL 130
            G +L
Sbjct: 114 DGAFL 118

Length = 258

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 94.9 bits (237), Expect = 6e-21
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 8/131 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M     L+G    +TGA+ GIGKA A + A +GA +V+A         L      AA   
Sbjct: 414 MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLA--------DLDEEAAEAAAAE 465

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                  L    D+ DE AVQ+A   A   FGG+DI+V+NA          T  + +   
Sbjct: 466 LGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRS 525

Query: 121 NQINARGTYLV 131
             +NA G +LV
Sbjct: 526 FDVNATGHFLV 536

Length = 681

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 90.4 bits (225), Expect = 8e-21
 Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 10/129 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G    ITGAS GIG+A A   A+ GA +V+AA+  E        + + A E+    G
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREE-------RLEALADEIGA--G 53

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             L   +D+ D  AV++A+ A  ++FG IDILVNNA            L  +D M   N 
Sbjct: 54  AALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNV 113

Query: 126 RGT-YLVKA 133
           +G     +A
Sbjct: 114 KGLLNGTRA 122

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 90.3 bits (225), Expect = 1e-20
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 6/98 (6%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
            G L G    +TGA+RG+G+AIAL+ A+ GA++V+  ++ E   +         + VE  
Sbjct: 1   MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAE------ELVEAVEAL 54

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G        D+ D+ A+++AV AAV++FG IDILVNNA
Sbjct: 55  GRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNA 92

Length = 249

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 89.4 bits (222), Expect = 3e-20
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 14/151 (9%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              ITGA++GIG+AIA + A DG NIV+A    E          S  +E+ +AG N +  
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEE------AAKSTIQEISEAGYNAVAV 57

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
             D+ D+  V++ ++ AV+KFG  D++VNNA    +T       +    +  +N  G   
Sbjct: 58  GADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVL- 116

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
                   IQ+A      K G    ++N +S
Sbjct: 117 ------FGIQAAAR-QFKKLGHGGKIINASS 140

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 88.8 bits (221), Expect = 4e-20
 Identities = 74/315 (23%), Positives = 113/315 (35%), Gaps = 81/315 (25%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T  L G    +TGA+RGIG+AIA++ A DGA +                           
Sbjct: 1   TRDLEGRVALVTGAARGIGRAIAVRLAADGAEV--------------------------- 33

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                  +VDI  +    +         G        A  + + D A             
Sbjct: 34  ------IVVDICGD-DAAATAELVEAAGGKA-----RARQVDVRDRA------------- 68

Query: 124 NARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
                          +++AV A V+ FG +DILV NA    LT  A    ++++ +  +N
Sbjct: 69  --------------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVN 114

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISP---PLNLNPFWFKNHVAYTISKYGMSMCALGM 240
             GT+L++Q  LP L ++    I+  S    P    P        Y  SK G+      +
Sbjct: 115 LTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGL----AHYAASKAGLVGFTRAL 170

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYIL 293
           A E    NI VN++ P   + T     L          +        +PE +A A  ++ 
Sbjct: 171 ALELAARNITVNSVHP-GGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLA 229

Query: 294 SSNPPSLTGQFLIDD 308
           S     +TGQ L  D
Sbjct: 230 SDEARYITGQTLPVD 244

Length = 251

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.3 bits (220), Expect = 5e-20
 Identities = 73/316 (23%), Positives = 115/316 (36%), Gaps = 87/316 (27%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGAS GIG+ IA + A +GA +V                             
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVV----------------------------- 33

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
               + D  +E     A      +          A A++                     
Sbjct: 34  ----VTDRNEE-----AAERVAAEILAGG----RAIAVA--------------------- 59

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQ 181
                  S   ++++AV AA+++FG +DILVNNA     T   N PL       +D +  
Sbjct: 60  ----ADVSDEADVEAAVAAALERFGSVDILVNNAG----TTHRNGPLLDVDEAEFDRIFA 111

Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA 241
           +N +  YL +Q  +P ++      I+N++    L P        Y  SK  +      +A
Sbjct: 112 VNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR--PGLGWYNASKGAVITLTKALA 169

Query: 242 EEFKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATS----R--KPEIMADAAYYI 292
            E   D I VNA+ P    T +  A +   T  +      +    R   PE +A+AA ++
Sbjct: 170 AELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFL 229

Query: 293 LSSNPPSLTGQFLIDD 308
            S     +TG  L+ D
Sbjct: 230 ASDEASWITGVTLVVD 245

Length = 251

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 88.1 bits (219), Expect = 5e-20
 Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 14/129 (10%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKEVED 62
           L+G    +TGASRGIG+AIA + A+DGA++V+    +   AE              E+E 
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAE----------EVVAEIEA 50

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
           AGG  +    D+ D   V    +AA   FGG+DILVNNA  +     A T  +++D M  
Sbjct: 51  AGGKAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFT 110

Query: 123 INARGTYLV 131
           +N +G + V
Sbjct: 111 VNTKGAFFV 119

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 87.7 bits (218), Expect = 7e-20
 Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 6/89 (6%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TGASRGIG+AIALK AK+GA ++I  +++E   +         +E++  G   L  + 
Sbjct: 2   LVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAE------EVVEELKAYGVKALGVVC 55

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           D+ D   V++ V    ++ G IDILVNNA
Sbjct: 56  DVSDREDVKAVVEEIEEELGPIDILVNNA 84

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 7/91 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + ITGAS GIG+A+A++ A+ GA +V+AA+           + S A+E+ D GG  L  
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNET-------RLASLAQELADHGGEALVV 55

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             D+ D  A +  + AAV +FGGIDILVNNA
Sbjct: 56  PTDVSDAEACERLIEAAVARFGGIDILVNNA 86

Length = 263

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 2e-19
 Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVI--AAKTAEPHPKLPGTIYSAAKEVEDAG 64
           LS     +TGASRGIG AIA + A DG  + +  A   A               E+E AG
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAAD--------ELVAEIEAAG 54

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           G  +    D+ D  AV    +AA   FG ID+LVNNA  + L   A+  L+ +D     N
Sbjct: 55  GRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATN 114

Query: 125 ARGTYLV 131
            RG ++V
Sbjct: 115 LRGAFVV 121

Length = 245

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 86.9 bits (216), Expect = 5e-19
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + ITGAS G+G+A A   A+ GA +V+ A+  E        + + A E+  AGG  L  
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEE-------GLEALAAEIRAAGGEALAV 62

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           + D+ D  AVQ+A + A ++ G ID  VNNA
Sbjct: 63  VADVADAEAVQAAADRAEEELGPIDTWVNNA 93

Length = 334

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 6e-19
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            +Q   +AA    GG+D LVNNA   +        +  +D +  +N RGT+L+ +  LP+
Sbjct: 70  SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH 129

Query: 198 LKKSNHAHILNISPPLNLNPFW-FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           L+ S    I+N++        W      AY  SK  +      +A E  G  I VNA+ P
Sbjct: 130 LRDSGRGRIVNLASDT---ALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAP 186

Length = 250

>gnl|CDD|216855 pfam02036, SCP2, SCP-2 sterol transfer family

 Score = 80.3 bits (199), Expect = 1e-18
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNL 389
             S ++D K G G  G        D TL+ +  + +AL  GKL PT+AFM GKLKI G++
Sbjct: 31  GLSLYLDFKDGGGDVG-SGDEGEADVTLSASLSDLLALATGKLDPTTAFMQGKLKIEGDI 89

Query: 390 QKAMKLEKLMG 400
           + A KL  L+ 
Sbjct: 90  ELAQKLSNLLK 100

This domain is involved in binding sterols. It is found in the SCP2 protein, as well as the C terminus of the enzyme estradiol 17 beta-dehydrogenase EC:1.1.1.62. The UNC-24 protein contains an SPFH domain pfam01145. Length = 100

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 1e-18
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 7/92 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + ITG S G+GKA+A + A++GAN+VI  +T E        +  A  E+E   G  L  
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKE-------KLEEAKLEIEQFPGQVLTV 55

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
            +D+R+   VQ  V    +KFG ID L+NNA+
Sbjct: 56  QMDVRNPEDVQKMVEQIDEKFGRIDALINNAA 87

Length = 252

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 84.1 bits (208), Expect = 1e-18
 Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGAS GIG+A A   A +GA + IAA+  +    L       A E+E  GG 
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEAL-------ADELEAEGGK 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            L   +D+ DE  V +AV   V+  G +DILVNNA  + L    +     +  M   N  
Sbjct: 54  ALVLELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL 113

Query: 127 G 127
           G
Sbjct: 114 G 114

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 83.0 bits (206), Expect = 3e-18
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 7/91 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              +TGASRGIG+AIAL+ A +GA + +  ++ E             +E++  GGN    
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAA-------ETVEEIKALGGNAAAL 54

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             D+ D  AV++ V     +FG +DILVNNA
Sbjct: 55  EADVSDREAVEALVEKVEAEFGPVDILVNNA 85

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 83.5 bits (207), Expect = 3e-18
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           G    +T AS GIG AIA   A++GA + I A+  E        +  AA E+   G   L
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRE-------NLERAASELRAGGAGVL 53

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             + D+ D   +   V  A D FG +DILVNNA
Sbjct: 54  AVVADLTDPEDIDRLVEKAGDAFGRVDILVNNA 86

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 4e-18
 Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 8/125 (6%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           GKL+G T  ITGA +GIG+ IA   A+ GAN+++   + E            A E+   G
Sbjct: 2   GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE--------KLADELCGRG 53

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
             C   + D+RD  +V +A+  A +K G IDILVNNA    L    +   +  D    IN
Sbjct: 54  HRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDIN 113

Query: 125 ARGTY 129
            +G +
Sbjct: 114 IKGVW 118

Length = 263

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 82.8 bits (205), Expect = 5e-18
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
              L    + ITG S G+G+AIA++ A DGA++++              +   A  +E A
Sbjct: 1   MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAV---AAGIEAA 57

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           GG  L    D+RD  A ++A++A V++FG +DILVNNA   +    A   ++++D +  +
Sbjct: 58  GGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDV 117

Query: 124 NARGTYLV 131
           N  G + V
Sbjct: 118 NLDGFFNV 125

Length = 249

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 82.8 bits (205), Expect = 5e-18
 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           G T  +TGA+ GIG AIA   A  GAN+V+     E           AAK   DAGG+ +
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEA-------AAKVAGDAGGSVI 53

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
               D+  E  +   + AA  +FGG+DILVNNA    +      P + +D +  + 
Sbjct: 54  YLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVM 109

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 83.8 bits (208), Expect = 2e-17
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G L G  + ITGAS GIG+A A+K A+ GA + + A+  E        +     E+   G
Sbjct: 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGE-------ALDELVAEIRAKG 419

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G       D+ D  AV   V   + + G +D LVNNA
Sbjct: 420 GTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNA 456

Length = 657

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 74/321 (23%), Positives = 111/321 (34%), Gaps = 91/321 (28%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN-- 66
           G  + ITGA+ GIGK  A + AK GA+++IA +  E   +       AA E++   GN  
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEE-------AAAEIKKETGNAK 53

Query: 67  --CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
              +    D+    +V+      + +F  +DIL+NNA                  M    
Sbjct: 54  VEVIQL--DLSSLASVRQFAEEFLARFPRLDILINNAGI----------------MA--P 93

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
            R         G E+Q AVN                               Y        
Sbjct: 94  PRRLT----KDGFELQFAVN-------------------------------Y-------- 110

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNIS------PPLNLNPFWFKNHV------AYTISKYG 232
            G +L++   LP LK S  + I+N+S       P++ N    +N+       AY  SK  
Sbjct: 111 LGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLA 170

Query: 233 MSMCALGMAEEFKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRK-PEIMADA 288
             +    +A   +G  + VNAL P   RT +               +   +K PE  A  
Sbjct: 171 NILFTRELARRLEGTGVTVNALHPGVVRTELLRRNGSFFL-LYKLLRPFLKKSPEQGAQT 229

Query: 289 AYYILSSNPPSLTGQFLIDDE 309
           A Y  +S            D 
Sbjct: 230 ALYAATSPELEGVSGKYFSDC 250

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 80.0 bits (198), Expect = 5e-17
 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 21/137 (15%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + ITG S GIG A+AL  A  G   VIA  TA    KL           E    N    
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYR-VIA--TARNPDKLE-------SLGELLNDNLEVL 51

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA-NTPLKKYDLMNQINARGT- 128
            +D+ DE ++++AV   +++FG ID+LVNNA    L      T +++   + ++N  G  
Sbjct: 52  ELDVTDEESIKAAVKEVIERFGRIDVLVNNA-GYGLFGPLEETSIEEVRELFEVNVFGPL 110

Query: 129 --------YLVKASQGL 137
                    + K   G 
Sbjct: 111 RVTRAFLPLMRKQGSGR 127

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 79.5 bits (196), Expect = 5e-17
 Identities = 81/316 (25%), Positives = 119/316 (37%), Gaps = 86/316 (27%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GG 65
           L G    +TGA  GIG A A + A++GA +V+A                AA+ V     G
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGG-----------AAQAVVAQIAG 49

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDT-ANTPLKKYDLMNQIN 124
             L   VD+ DE  V +    AV++FGG+D+LVNNA A+ LT    +T L  +D    IN
Sbjct: 50  GALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAIN 109

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
            RGT+L         + A    + + GG  +   N S+I+    +  P            
Sbjct: 110 LRGTFLC-------CRHAAPRMIARGGGSIV---NLSSIA--GQSGDPGY---------- 147

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
            G Y  S+           A I N++                  ++   +          
Sbjct: 148 -GAYGASK-----------AAIRNLT--------------RTLAAELRHA---------- 171

Query: 245 KGDNIAVNALWP------RTAIYTAAIE--MLTGGSADAKATSR----KPEIMADAAYYI 292
               I  NAL P            A  E  +  GG        +    +PE +A A  ++
Sbjct: 172 ---GIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFL 228

Query: 293 LSSNPPSLTGQFLIDD 308
           LS +   +TGQ L  D
Sbjct: 229 LSDDASFITGQVLCVD 244

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 80.0 bits (198), Expect = 6e-17
 Identities = 64/295 (21%), Positives = 108/295 (36%), Gaps = 72/295 (24%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G + G T  ITGAS GIG  +A + A+ G N+++ A+  +    L       AKE     
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEAL-------AKE----- 49

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                    + D+  V+            ++++        L+D                
Sbjct: 50  ---------LEDKTGVE------------VEVI-----PADLSDP--------------- 68

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                         ++   +   ++ G ID+LVNNA   +        L + + M Q+N 
Sbjct: 69  ------------EALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNI 116

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
                +++  LP + +    HI+NI     L P        Y+ +K  +   +  + EE 
Sbjct: 117 LALTRLTKAVLPGMVERGAGHIINIGSAAGLIP--TPYMAVYSATKAFVLSFSEALREEL 174

Query: 245 KGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN 296
           KG  + V A+ P   RT  + A    +   S      S  PE +A+AA   L   
Sbjct: 175 KGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLS--PEDVAEAALKALEKG 227

Length = 265

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 80.0 bits (198), Expect = 6e-17
 Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA---AKEV 60
           +GKL G    ITG   GIG+A+A+  A++GA++ I          LP     A    K +
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINY--------LPEEEDDAEETKKLI 72

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
           E+ G  CL    D+ DE   +  V   V +FG +DILVNNA+
Sbjct: 73  EEEGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAA 114

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 6/124 (4%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  + ITG S G+G+A+A++  K+ A +VI  ++ E            A+E++ AGG 
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEAN------DVAEEIKKAGGE 58

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D+  E  V + +  AV +FG +D+++NNA   +   +    L+ ++ +   N  
Sbjct: 59  AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLT 118

Query: 127 GTYL 130
           G +L
Sbjct: 119 GAFL 122

Length = 261

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 7/126 (5%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            LSG T  +TG SRG+G  IA    + GA +V++A+ AE        +  AA  +E  G 
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAE-------ELEEAAAHLEALGI 61

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
           + L    D+ DE  ++      +++FG +DILVNNA A       + P++ +D +  +N 
Sbjct: 62  DALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNV 121

Query: 126 RGTYLV 131
           RG +L+
Sbjct: 122 RGLFLL 127

Length = 259

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 76/307 (24%), Positives = 117/307 (38%), Gaps = 91/307 (29%)

Query: 11  TIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
              +TGA+RGIG  I  + AK G   +++ A+  E           A +++   G +   
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQA-------AVEKLRAEGLSVRF 54

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
             +D+ D+ ++++A +   +K+GG+DILVNNA         +TP        +  AR T 
Sbjct: 55  HQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTP-------TREQARETM 107

Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 189
                                                              + N  GT  
Sbjct: 108 ---------------------------------------------------KTNFFGTVD 116

Query: 190 VSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI 249
           V+Q  LP LKKS    I+N+S    L         AY +SK  ++     +A+E K   I
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSS--GLGSLT----SAYGVSKAALNALTRILAKELKETGI 170

Query: 250 AVNAL---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPP--SLTGQF 304
            VNA    W +T         + GG A      + PE  A+   Y L+  PP    TG+F
Sbjct: 171 KVNACCPGWVKTD--------MGGGKAP-----KTPEEGAETPVY-LALLPPDGEPTGKF 216

Query: 305 LIDDEVL 311
             D +V+
Sbjct: 217 FSDKKVV 223

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 80.7 bits (199), Expect = 2e-16
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 17/131 (12%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--- 63
           L+    F+TG + GIG+  A + A +GA++V+A    E           AA+ V      
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLE-----------AAEAVAAEING 460

Query: 64  ---GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
               G  +   +D+ DE AV++A       +GG+DI+VNNA   + +    T L+++ L 
Sbjct: 461 QFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLN 520

Query: 121 NQINARGTYLV 131
             I A G +LV
Sbjct: 521 LDILATGYFLV 531

Length = 676

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 2e-16
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 19/161 (11%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G+       +TGA+ GIG+A A   A++GA++V+A   AE   ++       AK++   G
Sbjct: 2   GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERV-------AKQIVADG 54

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS---AISLTDTANTPLKKYDLMN 121
           G  +   VD+ D  + ++  +A V  FGGID LVNNA+    + L      P   Y    
Sbjct: 55  GTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFM 114

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
            +N  G         L    AV   + K GG  I VN +S 
Sbjct: 115 SVNLDGA--------LVCTRAVYKHMAKRGGGAI-VNQSST 146

Length = 250

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 77.0 bits (190), Expect = 3e-16
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 7/90 (7%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + ITGAS GIG+A AL  A+ GA +V+AA++AE        ++  A+EV + GG  +  +
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAE-------ALHELAREVRELGGEAIAVV 55

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            D+ D   V+ A + AV++FG ID  VNNA
Sbjct: 56  ADVADAAQVERAADTAVERFGRIDTWVNNA 85

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 77.5 bits (191), Expect = 4e-16
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 15/151 (9%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              +TG ++GIGK IA + AKDG  + +A    E       T    AKE+  AGG  +  
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEE-------TAKETAKEINQAGGKAVAY 54

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
            +D+ D+  V SA++ A +KFGG D++VNNA    +T       ++   +  +N +G   
Sbjct: 55  KLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVL- 113

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
                   IQ+A      K G    ++N AS
Sbjct: 114 ------FGIQAAAR-QFKKQGHGGKIINAAS 137

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 76.6 bits (189), Expect = 6e-16
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 10/165 (6%)

Query: 93  GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGG 152
           G +I++N+ +     + A   ++K      + A   +    S    I++AV A  + FG 
Sbjct: 29  GANIVINSRNE-EKAEEAQQLIEKEG----VEAT-AFTCDVSDEEAIKAAVEAIEEDFGK 82

Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
           IDILVNNA  I        P  ++  +  +N  G + VSQ    ++ K  H  I+NI   
Sbjct: 83  IDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVARHMIKQGHGKIINIC-- 140

Query: 213 LNLNPFW-FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            +L          AY  SK G++     +A E+    I VNA+ P
Sbjct: 141 -SLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAP 184

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.9 bits (190), Expect = 6e-16
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TG  RGIG  IA   A  G ++ I  +  +        + +  +E+   G   +    
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDE------ELAATQQELRALGVEVIFFPA 59

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLMNQINARGTY 129
           D+ D  A ++ ++AA   +G ID LVNNA        D  +   + +D +  IN RG +
Sbjct: 60  DVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPF 118

Length = 256

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.0 bits (187), Expect = 1e-15
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            +  G    ITG +RGIG+AIA    ++GA + +   +AE          + AKE+ + G
Sbjct: 3   MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE----------NEAKELREKG 52

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
              + C V  RD+  V+ +      +FG +D+LVNNA  + L        +KY+ M +IN
Sbjct: 53  VFTIKCDVGNRDQ--VKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKIN 110

Query: 125 ARGT---------YLVKASQGLEIQSAVNAAV 147
             G           L  +  G  +  A NA +
Sbjct: 111 LNGAIYTTYEFLPLLKLSKNGAIVNIASNAGI 142

Length = 255

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 75.8 bits (187), Expect = 1e-15
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           G  + ITG S GIGKA+A +  K+GAN++I A++     KL   +     E   +G    
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSES---KLEEAVEEIEAEANASGQKVS 57

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
               D+ D   V+ A   AV+K G  D++VN A
Sbjct: 58  YISADLSDYEEVEQAFAQAVEKGGPPDLVVNCA 90

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 75.7 bits (186), Expect = 1e-15
 Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 7/124 (5%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G T  +TGA+ GIGK IAL+ A+ GA + IA    +          + A E+  AGG 
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQD-------GANAVADEINKAGGK 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +   +D+ +E AV + ++   ++FG +DILV+NA    +    N     +  M  I+  
Sbjct: 58  AIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVD 117

Query: 127 GTYL 130
           G +L
Sbjct: 118 GAFL 121

Length = 262

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 75.2 bits (186), Expect = 2e-15
 Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 23/210 (10%)

Query: 109 TANTPLKKYDLMNQINARG--TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAIS 164
            A++      L+ +I A G     V+   S    ++ AV+ A  +FGG+DILVNNA  I 
Sbjct: 36  YASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNA-GI- 93

Query: 165 LTDTANTPLKKYDL-----MNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW 219
              T +  L +        +   N  G + +++     + K     I+NIS  + L    
Sbjct: 94  ---TRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMG-- 148

Query: 220 FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATS 279
                 Y  SK G+      +A E     I VNA+ P   I T   + L     +A    
Sbjct: 149 NPGQANYAASKAGVIGFTKSLARELASRGITVNAVAP-GFIETDMTDALPEDVKEAILAQ 207

Query: 280 R------KPEIMADAAYYILSSNPPSLTGQ 303
                  +PE +A A  ++ S     +TGQ
Sbjct: 208 IPLGRLGQPEEIASAVAFLASDEAAYITGQ 237

Length = 248

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 9/129 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    ITG S+GIG AIA     +G  + I A+  +        +  AA E+ +  GN
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQK-------ELEEAAAEL-NNKGN 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            L    D+RDE  VQ AV+A V  FGG+D+L+ NA             +++ L+   N  
Sbjct: 56  VLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLT 115

Query: 127 GT-YLVKAS 134
           G  Y +KA+
Sbjct: 116 GAFYTIKAA 124

Length = 237

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 2e-15
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 9/100 (9%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED- 62
             +L+G    +TGA++GIG AIA   A++GA + +A   A    +       AA  +   
Sbjct: 2   MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAER-------AAAAIARD 54

Query: 63  -AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            AG   L    D+ D  +V +AV AA + FG +D+LVNNA
Sbjct: 55  VAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNA 94

Length = 260

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.8 bits (184), Expect = 3e-15
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L    + +TG+ RGIG+AIA++ AK+G+ +V+ AK      K    +    K V++ GG 
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK------KRAEEMNETLKMVKENGGE 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            +  + D+      ++   A +D++G  DILVNNA
Sbjct: 58  GIGVLADVSTREGCETLAKATIDRYGVADILVNNA 92

Length = 252

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 74.4 bits (183), Expect = 3e-15
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 14/133 (10%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TGA +GIG AIA +  +DG  + I     E       T  +AA ++   GG  +    
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEE-------TAQAAADKLSKDGGKAIAVKA 58

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVK 132
           D+ D   V +AV   VD FG ++++VNNA     T       +++D +  IN  G     
Sbjct: 59  DVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVI--- 115

Query: 133 ASQGLEIQSAVNA 145
                 IQ+A  A
Sbjct: 116 ----WGIQAAQEA 124

Length = 256

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 74.0 bits (182), Expect = 4e-15
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGAS GIGKAIA++ A  GAN+V+  ++ E   +         +E++  GG 
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAE------EVVEEIKAVGGK 54

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D+  E  V +   +A+ +FG +DILVNNA       +    L+ ++ +  +N  
Sbjct: 55  AIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLT 114

Query: 127 GTYLV 131
           G +L 
Sbjct: 115 GQFLC 119

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 5e-15
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G    ITGAS GIG+A A   A++GA +V+ A+      +L         E+   GG 
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQL-------VAEIRAEGGE 56

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
            +    D+RDE   ++ V  AV++FGG+DI  NNA  +
Sbjct: 57  AVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTL 94

Length = 254

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 73.9 bits (182), Expect = 6e-15
 Identities = 56/255 (21%), Positives = 98/255 (38%), Gaps = 68/255 (26%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            +  G  + +TGA  G+G+A AL  A+ GA +V+                          
Sbjct: 1   LRFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVN------------------------- 35

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                   D+  +       ++A DK                            ++++I 
Sbjct: 36  --------DLGGDRKGSGKSSSAADK----------------------------VVDEIK 59

Query: 125 ARGTYLVKASQGLEI-QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
           A G   V     +E  +  V  A+D FG +DILVNNA  +     A    + +DL+ +++
Sbjct: 60  AAGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVH 119

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKN--HVAYTISKYGMSMCALGMA 241
            +G++ V++   PY++K     I+N S    L    + N     Y+ +K G+   +  +A
Sbjct: 120 LKGSFKVTRAAWPYMRKQKFGRIINTSSAAGL----YGNFGQANYSAAKLGLLGLSNTLA 175

Query: 242 EEFKGDNIAVNALWP 256
            E    NI  N + P
Sbjct: 176 IEGAKYNITCNTIAP 190

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 73.7 bits (181), Expect = 7e-15
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 15/163 (9%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP---HPKLPGT----IYSAAKE 59
           L G   FITGA+RG G+A A++ A +GA+I IA     P   +P  P      +   A+ 
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADI-IAIDLCAPLSDYPTYPLATREDLDETARL 59

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           VE  G   L    D+RD   V++ V   V++FG +D++V NA  +S   +     +++D 
Sbjct: 60  VEALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDT 119

Query: 120 MNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
           +  IN  G +          ++ V   +++  G  I++ ++ A
Sbjct: 120 VLDINLTGVWRT-------CKAVVPHMIERGNGGSIIITSSVA 155

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 73.4 bits (181), Expect = 8e-15
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 8/99 (8%)

Query: 2   INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE 61
           +   + +G  + +TGA++GIG+ +AL+AA +GA +V+  + +E        ++  A E+ 
Sbjct: 1   MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDR-SE-------LVHEVAAELR 52

Query: 62  DAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNN 100
            AGG  L    D+      Q+A+ AAV+ FG ID+L+NN
Sbjct: 53  AAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINN 91

Length = 260

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 73.0 bits (180), Expect = 8e-15
 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + ITG   GIG+ +AL+ AK GA +VI     +            A  V  AGG     
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKG-------AEETANNVRKAGGKVHYY 53

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             D+     V  A      + G + IL+NNA
Sbjct: 54  KCDVSKREEVYEAAKKIKKEVGDVTILINNA 84

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 72.9 bits (179), Expect = 9e-15
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TGASRGIG+A A     +G  + I A+           + +AA +        L    
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARDE-------ARLAAAAAQE---LEGVLGLAG 53

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           D+RDE  V+ AV+A  + FGG+D LVNNA
Sbjct: 54  DVRDEADVRRAVDAMEEAFGGLDALVNNA 82

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 73.2 bits (180), Expect = 1e-14
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 8/118 (6%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +TG + GIG AIA + A +GA +V+A    E        I     E    G   L    D
Sbjct: 6   VTGGASGIGLAIAKRLAAEGAAVVVADIDPE--------IAEKVAEAAQGGPRALGVQCD 57

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
           +  E  VQSA   AV +FGG+DI+V+NA   + +  A T L+ ++    IN  G +LV
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLV 115

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              ITGAS GIGKA AL  AK G ++ + A++ +    L       A E+   G      
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEAL-------AAELRSTGVKAAAY 60

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
            +D+ +  A+   +   +++FG  D+L+NNA           PL  +  + Q+N
Sbjct: 61  SIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLN 114

Length = 241

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 10/128 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
             +L G    +TGA+ GIG+A+A +   +GA +VIA             I  AA  V   
Sbjct: 1   MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVS-- 58

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                   +D+  + ++   V AAV++FGGIDIL NNA+   +    +     YD +  +
Sbjct: 59  --------LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAV 110

Query: 124 NARGTYLV 131
           N +G + +
Sbjct: 111 NVKGLFFL 118

Length = 257

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 72.8 bits (179), Expect = 1e-14
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            LSG    +TG + GIG AIA   A  GA + +  ++          +   A ++   GG
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE--------DVAEVAAQLL--GG 61

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
           N    + D+ D  +V++AV A +  FG IDILVN+A    L    +   + +D    IN 
Sbjct: 62  NAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINL 121

Query: 126 RGTYLV 131
           +G++L+
Sbjct: 122 KGSFLM 127

Length = 255

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 72.6 bits (178), Expect = 2e-14
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 7/96 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G    ITGA  GIGK IA+  A  GA++V++   A+              E++  GG
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD-------AANHVVDEIQQLGG 60

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
               C  DI  E  + +  + A+ K G +DILVNNA
Sbjct: 61  QAFACRCDITSEQELSALADFALSKLGKVDILVNNA 96

Length = 255

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLP 69
           T+ ITGAS GIG+A A + AK GA +++  + AE   +L       A E+        LP
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQEL-------ADELGAKFPVKVLP 54

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA-NTPLKKYDLMNQINARG 127
             +D+ D  ++++A+    ++F  IDILVNNA      D A    L+ ++ M   N +G
Sbjct: 55  LQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKG 113

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 27/209 (12%)

Query: 112 TPLKKYDLMNQINARGTYL-VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA- 169
             L+    +   N     L V   +   I++AV   +++FG ID+LVNNA    L     
Sbjct: 35  DKLESLGELLNDNLEVLELDVTDEE--SIKAAVKEVIERFGRIDVLVNNA-GYGLFGPLE 91

Query: 170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTIS 229
            T +++   + ++N  G   V++  LP ++K     I+N+S    L P  F     Y  S
Sbjct: 92  ETSIEEVRELFEVNVFGPLRVTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLG--PYCAS 149

Query: 230 KYGMSMCALGMAEEFKGDNIAV-------------------NALWPRTAIYTAAIEMLTG 270
           K  +   +  +  E     I V                       P  + Y    + +  
Sbjct: 150 KAALEALSESLRLELAPFGIKVTIIEPGPVRTGFADNAAGSALEDPEISPYAPERKEIKE 209

Query: 271 GSADAKATSRKPEIMADAAYYIL-SSNPP 298
            +A   +    PE +AD     L S +PP
Sbjct: 210 NAAGVGSNPGDPEKVADVIVKALTSESPP 238

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 71.6 bits (176), Expect = 3e-14
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)

Query: 119 LMNQINARG--TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK 174
           ++ +I A G     V+A  S+  ++ +   +A+ +FG +DILVNNA       +    L+
Sbjct: 44  VVEEIKAVGGKAIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLE 103

Query: 175 KYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGM 233
            ++ +  +N  G +L +++ +   +KS     I+N+S      P+    HV Y  SK G+
Sbjct: 104 DWNKVIDVNLTGQFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPG--HVNYAASKGGV 161

Query: 234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK--------PEIM 285
            M    +A+E+    I VNA+ P  AI T                           PE +
Sbjct: 162 KMMTKTLAQEYAPKGIRVNAIAP-GAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEI 220

Query: 286 ADAAYYILSSNPPSLTGQFLIDD 308
           A AA ++ S     +TG  L  D
Sbjct: 221 AAAAAWLASDEASYVTGTTLFVD 243

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 71.7 bits (176), Expect = 3e-14
 Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 22/190 (11%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGTY 188
           ++  ++++ V AA+ KFG +DILVNNA         N P+ +     +D +  +N +  Y
Sbjct: 61  TKRADVEAMVEAALSKFGRLDILVNNAGITHR----NKPMLEVDEEEFDRVFAVNVKSIY 116

Query: 189 LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN 248
           L +Q  +P++++     I+NI+    L P        Y  SK  +      MA E    N
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRP--RPGLTWYNASKGWVVTATKAMAVELAPRN 174

Query: 249 IAVNALWPRTAIYTAAIEMLTG-GSADAKATSR---------KPEIMADAAYYILSSNPP 298
           I VN L P  A  T  + M  G  + + +A  R          P+ +A+AA Y+ S    
Sbjct: 175 IRVNCLCP-VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAALYLASDEAS 233

Query: 299 SLTGQFLIDD 308
            +TG  L  D
Sbjct: 234 FITGVALEVD 243

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 70.9 bits (174), Expect = 5e-14
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 19/131 (14%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            +L G    +TGA  G G+ IA + A++GA +VIA   A+           A +   D G
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINAD----------GAERVAADIG 50

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDL 119
              +    D+     V++ V AA+ KFG +DILVNNA         N P+ +     +D 
Sbjct: 51  EAAIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHR----NKPMLEVDEEEFDR 106

Query: 120 MNQINARGTYL 130
           +  +N +  YL
Sbjct: 107 VFAVNVKSIYL 117

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 5e-14
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +GKL G    ITG   GIG+A+A+  AK+GA+I I                   + VE  
Sbjct: 41  SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDAN------ETKQRVEKE 94

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G  CL    D+ DE   + AV   V + G +DILVNNA
Sbjct: 95  GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNA 132

Length = 290

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 71.2 bits (174), Expect = 5e-14
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 14/149 (9%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           +++   L G    ITGAS GIGK +AL   + GA + IAA+  +        +   A E+
Sbjct: 1   VLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLD-------ALEKLADEI 53

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
             +GG  +P   D+     V S ++    + GGIDI V NA  I++T   + PL+++  +
Sbjct: 54  GTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRL 113

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDK 149
              N  G +L         Q+A  A V +
Sbjct: 114 QNTNVTGVFLTA-------QAAAKAMVKQ 135

Length = 253

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 71.0 bits (174), Expect = 5e-14
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L      +TGA RG+G AIAL  A+ GA+++IAA+T          +   A+++  AG 
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTES-------QLDEVAEQIRAAGR 59

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNN---ASAISLTDTANTPLK 115
                  D+    A       AV+ FG +DI+VNN        L  T+   L 
Sbjct: 60  RAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLA 112

Length = 263

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 70.7 bits (174), Expect = 6e-14
 Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 10/164 (6%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            +++A+ A  ++FG IDILVNNA            L  +D M   N +G    ++  LP 
Sbjct: 67  AVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPG 126

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           + +    HI+N+       P  +     Y  +K  +   +LG+ +E  G  I V  + P 
Sbjct: 127 MVERKSGHIINLGSIAGRYP--YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPG 184

Query: 258 TAIYTAAIEMLTGGSADAKATSRK-------PEIMADAAYYILS 294
             + T     +     D +A           PE +A+A  +  +
Sbjct: 185 -LVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 71.3 bits (175), Expect = 6e-14
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 17/132 (12%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            +L      ITGAS GIG+A A+  A++GA  V+A   AE        +     +++  G
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIAE-------AVSETVDKIKSNG 53

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY--DLMNQ 122
           G      VDI DE  V+   +   ++FG +D+L NNA      D A   + +Y  D+ ++
Sbjct: 54  GKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAG----VDNAAGRIHEYPVDVFDK 109

Query: 123 INA---RGTYLV 131
           I A   RGT+L+
Sbjct: 110 IMAVDMRGTFLM 121

Length = 272

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 7e-14
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC--LP 69
           + ITGA+ G+G+AIAL+ A++G  + +A    E             K + +AGG+     
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLALADVNEE-------GGEETLKLLREAGGDGFYQR 55

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 127
           C  D+RD   + +   A  +K+GGID++VNNA   S        L+ +D    IN  G
Sbjct: 56  C--DVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMG 111

Length = 270

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 70.6 bits (173), Expect = 7e-14
 Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 75/253 (29%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGA+ G+G+ IA+  A+ GA+IV A ++               ++VE  G  
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSE---------TQQQVEALGRR 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            L    D+ D  A+++ V++AV++FG IDILVNNA  I   D      K +D        
Sbjct: 54  FLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWD-------- 105

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                                                   D  N  LK    + Q  A+ 
Sbjct: 106 ----------------------------------------DVMNVNLKSVFFLTQAAAK- 124

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHV---AYTISKYGMSMCALGMAEE 243
                     +LK+     I+NI+  L+     F+  +   +YT SK+ ++     +A E
Sbjct: 125 ---------HFLKQGRGGKIINIASMLS-----FQGGIRVPSYTASKHAVAGLTKLLANE 170

Query: 244 FKGDNIAVNALWP 256
           +    I VNA+ P
Sbjct: 171 WAAKGINVNAIAP 183

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 70.1 bits (172), Expect = 9e-14
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TG SRGIGKAIAL+ A+ GA++VI  + ++            A E+E+ GG  +    
Sbjct: 2   LVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAA------EVAAEIEELGGKAVVVRA 55

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNASA 103
           D+     V+    A  ++FG +D+LV+NA+A
Sbjct: 56  DVSQPQDVEEMFAAVKERFGRLDVLVSNAAA 86

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 9e-14
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G L G T  +TG+SRGIG   A   A  GA++V+  +   P             E+E AG
Sbjct: 2   GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRAN------KVVAEIEAAG 55

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
           G       D+ DE +V + ++ A ++FGG+D LV NAS
Sbjct: 56  GRASAVGADLTDEESVAALMDTAREEFGGLDALVLNAS 93

Length = 248

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 13/181 (7%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            +++AV+  + +FG IDIL+NNA+   L    +     +  +  I+  GT+  ++     
Sbjct: 67  AVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAVGKR 126

Query: 198 LKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           L ++ +   ILNIS         F+ H A   +K G+      +A E+    I VNA+ P
Sbjct: 127 LIEAKHGGSILNISATYAYTGSPFQVHSA--AAKAGVDALTRSLAVEWGPYGIRVNAIAP 184

Query: 257 RTAIY-TAAIEMLTGGSADAKATSRK--------PEIMADAAYYILSSNPPSLTGQFLID 307
              I  T  +E L       K    +        PE +A+ A ++LS     + G  L+ 
Sbjct: 185 -GPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDAASYINGTTLVV 243

Query: 308 D 308
           D
Sbjct: 244 D 244

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 25/97 (25%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE------DAG 64
              +TGAS GIGKA A + A  G                  T+Y AA+ V+        G
Sbjct: 5   VALVTGASSGIGKATARRLAAQGY-----------------TVYGAARRVDKMEDLASLG 47

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            + L   +D+ DE ++++AV+  + + G ID+LVNNA
Sbjct: 48  VHPLS--LDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82

Length = 273

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
              L G  + ITG   G+G+A A   A  GA + +  + A P   L  T+     +    
Sbjct: 2   EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAP---LSQTLPGVPADALRI 58

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           GG      +D+ D  A + AV+    +FG +D LVN A A      A+     +D M  +
Sbjct: 59  GG------IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGV 112

Query: 124 NARGT-YLVKASQGLEIQSAVNAAV 147
           N + T    KA+      S     V
Sbjct: 113 NVKTTLNASKAALPALTASGGGRIV 137

Length = 239

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 69.5 bits (171), Expect = 2e-13
 Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  + ITGAS GIG+ +A   A+ GA +V++A+  E   ++     S   E+    G 
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEV----KSECLEL----GA 52

Query: 67  CLPCIV--DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
             P +V  D+ D    +  V  A+  FGG+DIL+NNA     +   +T +     + ++N
Sbjct: 53  PSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVN 112

Query: 125 ARGT-YLVKA 133
             G   L KA
Sbjct: 113 YFGPVALTKA 122

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG    ITG+S GIG   A+  A+ GA + +  + AE   +L  T     +    AG +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAE---RLEET----RQSCLQAGVS 53

Query: 67  CLP--CIV-DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                 +V D+ +E      ++  + KFG +DILVNNA  ++     +  +++YD +  +
Sbjct: 54  EKKILLVVADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNL 113

Query: 124 NARGTYL 130
           N R    
Sbjct: 114 NLRAVIY 120

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
           FITGASRG G+A    A + G  +V  A+       L           E  G   LP  +
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDTATLADL----------AEKYGDRLLPLAL 56

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           D+ D  AV +AV  AV+ FG +DI+VNNA
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNA 85

Length = 275

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 14/129 (10%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-- 62
            +L+G    +TGA  GIG+A A   A++GA +V+A + AE           AA+ V    
Sbjct: 1   MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAE-----------AAERVAAAI 49

Query: 63  -AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 121
            AGG       D+    AV++ V+    ++G +D+LVNNA          T    +D + 
Sbjct: 50  AAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVM 109

Query: 122 QINARGTYL 130
           ++N  G +L
Sbjct: 110 RVNVGGVFL 118

Length = 252

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 71/309 (22%), Positives = 120/309 (38%), Gaps = 81/309 (26%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           ++G  + +TG SRGIG+ IA    + GA ++I+A+ AE           AA+E+  A G 
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAE-------ACADAAEELS-AYGE 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
           C+    D+  E  +++ V    ++   +D+LVNNA                         
Sbjct: 56  CIAIPADLSSEEGIEALVARVAERSDRLDVLVNNAG------------------------ 91

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                 A+ G        A ++ F                     P   +D +  IN + 
Sbjct: 92  ------ATWG--------APLEAF---------------------PESGWDKVMDINVKS 116

Query: 187 TYLVSQKCLPYLKKS----NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
            + ++Q  LP L+ +    N A ++NI     +     +N+ +Y  SK  +      +A+
Sbjct: 117 VFFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENY-SYGASKAAVHQLTRKLAK 175

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR--------KPEIMADAAYYILS 294
           E  G++I VNA+ P     +     L    A  +A  +        +PE MA  A  + S
Sbjct: 176 ELAGEHITVNAIAP-GRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLAS 234

Query: 295 SNPPSLTGQ 303
                LTG 
Sbjct: 235 RAGAYLTGA 243

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 3e-13
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M      SG ++ +TGAS GIG+A A+  A+ GA +V AA+ A    +L G         
Sbjct: 1   MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------- 53

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                 C P  +D+ D+ A++    AA+   G  D LVN A   SL    +   + +D +
Sbjct: 54  -----GCEPLRLDVGDDAAIR----AALAAAGAFDGLVNCAGIASLESALDMTAEGFDRV 104

Query: 121 NQINARGTYLV 131
             +NARG  LV
Sbjct: 105 MAVNARGAALV 115

Length = 245

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 4e-13
 Identities = 48/166 (28%), Positives = 65/166 (39%), Gaps = 38/166 (22%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  I +TG S GIG AI  +   +GAN+V A                     +    N
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADI----------------HGGDGQHEN 50

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS----LTDTANTPLKKY----- 117
                 D+     V   V   ++KFG ID LVNNA  I+    L D    P  KY     
Sbjct: 51  YQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA-GINIPRLLVD-EKDPAGKYELNEA 108

Query: 118 --DLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
             D M  IN +G +L+        Q+     V +  G  ++VN +S
Sbjct: 109 AFDKMFNINQKGVFLMS-------QAVARQMVKQHDG--VIVNMSS 145

Length = 266

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 67.9 bits (166), Expect = 6e-13
 Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 21/159 (13%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIA----AKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            + ITGASRGIG+A A+ AA  G ++ I     A  AE            A  V  AGG 
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAE----------ETADAVRAAGGR 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLT-DTANTPLKKYDLMNQINA 125
                 D+ +E  V +  +A    FG +D LVNNA  ++ +   A+    +   M   N 
Sbjct: 54  ACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV 113

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS 164
            G YL         ++A   + D+ G    +VN +S  S
Sbjct: 114 LGAYLCAR------EAARRLSTDRGGRGGAIVNVSSIAS 146

Length = 248

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 66.0 bits (162), Expect = 6e-13
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 5/135 (3%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           T+ ITG + G+G A+A   A +GA  ++      P P     +     E+E  G      
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELV----AELEALGAEVTVA 57

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT-Y 129
             D+ D  A+ + + A     G +D +V+NA  +          ++++ +      G   
Sbjct: 58  ACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWN 117

Query: 130 LVKASQGLEIQSAVN 144
           L + ++ L++ + V 
Sbjct: 118 LHELTRDLDLGAFVL 132

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 8e-13
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
                 L+G  + +TGA+RGIG  +A +    GA + +              + + A E+
Sbjct: 1   GPPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE-------LAALAAEL 53

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                  L  + D+ D  A+Q+A   AV++FGGID++V NA
Sbjct: 54  GGDDR-VLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANA 93

Length = 296

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 9e-13
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 14/105 (13%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKEV 60
           G L G  + +TGA  GIG+A AL  A +GA +V+                    SAA+ V
Sbjct: 2   GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGG------SAAQAV 55

Query: 61  ED----AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            D    AGG  +    DI D     + V+AAV+ FGG+D+LVNNA
Sbjct: 56  VDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNA 100

Length = 286

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 1e-12
 Identities = 57/256 (22%), Positives = 94/256 (36%), Gaps = 80/256 (31%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L GL + +TG + GIG+AIA   A+ GA + +                            
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHV---------------------------- 40

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
              C V        ++A+ A   +  G  +    A+   + D A                
Sbjct: 41  ---CDVS-------EAALAATAARLPGAKVT---ATVADVADPA---------------- 71

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT--ANTPLKKYDLMNQINA 184
                      +++   + AV++FGG+D+LVNNA     T      TP ++++    +N 
Sbjct: 72  -----------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITP-EQWEQTLAVNL 119

Query: 185 RGTYLVSQKCLPYLKKSNH-AHILNIS---PPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
            G +  ++  +P LK S H   I+ +S     L   P        Y  SK+ +      +
Sbjct: 120 NGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-PGR----TPYAASKWAVVGLVKSL 174

Query: 241 AEEFKGDNIAVNALWP 256
           A E     I VNA+ P
Sbjct: 175 AIELGPLGIRVNAILP 190

Length = 264

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 66.8 bits (163), Expect = 1e-12
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +TG + GIGKAIA   AK GA++VIA   +E            A  ++ AGG  +    +
Sbjct: 4   VTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEA-------VAAAIQQAGGQAIGLECN 56

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +  E  +++ V A V +FGGI ILVNNA
Sbjct: 57  VTSEQDLEAVVKATVSQFGGITILVNNA 84

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 66.9 bits (163), Expect = 1e-12
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 10/125 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G T  ITG++RGIG+A A    ++GA + IA    E          +A     + G  
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLE----------AARATAAEIGPA 50

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                +D+ D+ ++   V A VD++G IDILVNNA+   L    +   + YD +  IN  
Sbjct: 51  ACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVS 110

Query: 127 GTYLV 131
           GT  +
Sbjct: 111 GTLFM 115

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 16/181 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            +++AV A +  FG IDILVN+A    L    +   + +D    IN +G++L++Q    +
Sbjct: 75  SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRH 134

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKY---GMSMCALGMAEEFKGDNIAVNAL 254
           +  +    I+N++    +     + HVAY  SK    GM+     +A E+    I VNA+
Sbjct: 135 MIAAGGGKIVNLASQAGV--VALERHVAYCASKAGVVGMTKV---LALEWGPYGITVNAI 189

Query: 255 WPRTAIYTA----AIEMLTGGSADAKATSR---KPEIMADAAYYILSSNPPSLTGQFLID 307
            P T + T     A     G  A     +     PE +A AA ++ S     +TG+ L+ 
Sbjct: 190 SP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVI 248

Query: 308 D 308
           D
Sbjct: 249 D 249

Length = 255

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 11/169 (6%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           + AV+    +FG +D LVN A A      A+     +D M  +N + T   S+  LP L 
Sbjct: 70  RRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALT 129

Query: 200 KSNHAHILNISP--PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
            S    I+NI     L   P       AY  +K G++     +A E     I VNA+ P 
Sbjct: 130 ASGGGRIVNIGAGAALKAGPGM----GAYAAAKAGVARLTEALAAELLDRGITVNAVLP- 184

Query: 258 TAIYTAAIEMLTGGSADAKATS-RKPEIMADAAYYILSSNPPSLTGQFL 305
                           DA  +    PE +A    ++LS    ++TG  +
Sbjct: 185 ---SIIDTPPNRADMPDADFSRWVTPEQIAAVIAFLLSDEAQAITGASI 230

Length = 239

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 4e-12
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G    +TG++RG+G  IA   A  GA++++  + A        T+ +A   +  AGG 
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAA-------TLEAAVAALRAAGGA 61

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASA 103
                 DI DE AV +A      + G +DILVNN  A
Sbjct: 62  AEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGA 98

Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 11/93 (11%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           GL   +TG + G+G A   +    GA +VI      P            + V   G NC 
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSP-----------GETVAKLGDNCR 50

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              VD+  E  V++A+  A  KFG +DI+VN A
Sbjct: 51  FVPVDVTSEKDVKAALALAKAKFGRLDIVVNCA 83

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M      +G  + + G + GI   IA   A+ GAN+ +A+++ E        + +A  ++
Sbjct: 1   MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQE-------KVDAAVAQL 53

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           + AG   L    D+RD  AV++A     D+FG ID+LV+ A
Sbjct: 54  QQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGA 94

Length = 264

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 65.1 bits (159), Expect = 5e-12
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 19/156 (12%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
           +TG+SRGIGKAIAL+ A++G +I +    + K AE            A+E+E  G   L 
Sbjct: 9   VTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAE----------ETAEEIEALGRKALA 58

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
              ++ D   ++       ++FG +D+ VNNA++  L          +D    INA+   
Sbjct: 59  VKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKA-L 117

Query: 130 LVKASQGLEIQSAVNA----AVDKFGGIDILVNNAS 161
           L  A +  ++   V      ++   G I  L N  +
Sbjct: 118 LFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTT 153

Length = 250

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.2 bits (159), Expect = 6e-12
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 27/202 (13%)

Query: 126 RGTYLVKASQGL--EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
           +G + +K   G   +++ +      +FG +D+LVNNA  + L        +KY+ M +IN
Sbjct: 51  KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKIN 110

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
             G    + + LP LK S +  I+NI+    +     +    Y I+K G+ +    +A E
Sbjct: 111 LNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA-AEGTTFYAITKAGIIILTRRLAFE 169

Query: 244 FKGDNIAVNAL---WPRTAIYTAAIEMLTGGSADAKA--------------TSRKPEIMA 286
                I VNA+   W  T       +M   G +  +A              T+ KPE +A
Sbjct: 170 LGKYGIRVNAVAPGWVET-------DMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIA 222

Query: 287 DAAYYILSSNPPSLTGQFLIDD 308
           +   ++ S +   +TGQ ++ D
Sbjct: 223 NIVLFLASDDARYITGQVIVAD 244

Length = 255

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 64.6 bits (158), Expect = 6e-12
 Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              +TGA++ IG+AIA   A +G  +V+    +E              E+     + +  
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSE------AEAQRLKDELNALRNSAVLV 55

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
             D+ D  A    V AA   FG  D+LVNNASA   T         +  +  IN +  YL
Sbjct: 56  QADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYL 115

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 65.2 bits (159), Expect = 6e-12
 Identities = 59/257 (22%), Positives = 94/257 (36%), Gaps = 78/257 (30%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G T  ITGAS+GIG AIA +    GA+++I A                         
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVA------------------------- 40

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                    RD  A+  A +   ++F   ++         L                   
Sbjct: 41  ---------RDADALAQARDELAEEFPEREVH-------GLA------------------ 66

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA-ISLTDTANTPLKKYDLMNQINA 184
                   S   + ++ ++   D + G+ ILVNNA   I       T   ++  + + N 
Sbjct: 67  -----ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTE-DEWRGIFETNL 120

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL-----G 239
              + +S+   P LK+   + I+NI     L       HV  + + YGM+  AL      
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGSVSGL------THVR-SGAPYGMTKAALLQMTRN 173

Query: 240 MAEEFKGDNIAVNALWP 256
           +A E+  D I VNA+ P
Sbjct: 174 LAVEWAEDGIRVNAVAP 190

Length = 257

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 64.4 bits (157), Expect = 9e-12
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + +TGASRG+G AIA   A++GA +V+    +           SA     +AG   +  
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTE---------SAEAVAAEAGERAIAI 52

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             D+RD   VQ+ +  A + FG +D +VNNA
Sbjct: 53  QADVRDRDQVQAMIEEAKNHFGPVDTIVNNA 83

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 11/128 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G    ITG + GIG+A A   AK GA +VIA    +   +      + A E+ D   
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIA-DIDDDAGQ------AVAAELGDPDI 53

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS--LTDTANTPLKKYDLMNQI 123
           + + C  D+  E  V++AV+ AV +FG +DI+ NNA  +         T L++++ +  +
Sbjct: 54  SFVHC--DVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDV 111

Query: 124 NARGTYLV 131
           N  G +L 
Sbjct: 112 NVYGAFLG 119

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 10/126 (7%)

Query: 138 EIQSAVNA--AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN--QINARGTYLVSQK 193
           EI  +  A        G+D+L+NNA  +     A+    + DL+   Q+N  G  L++Q 
Sbjct: 59  EIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSE-DLLEVFQVNVLGPLLLTQA 117

Query: 194 CLPYLKKSNHAHILNISPP---LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
            LP L K   A I+NIS     +  N        +Y  SK  ++M    +A E K D I 
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNT--SGGWYSYRASKAALNMLTKSLAVELKRDGIT 175

Query: 251 VNALWP 256
           V +L P
Sbjct: 176 VVSLHP 181

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L    I ITG ++G+G+A+A   A+ GA + +     E   KL      A  E    G 
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQE---KLE----EAVAECGALGT 54

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                  ++ DE  V++      + FG ++ L+NNA
Sbjct: 55  EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNA 90

Length = 253

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 14/130 (10%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           G+L G    +TG ++G+G AIA   A+ GA  +VI  + AE            A E+E  
Sbjct: 2   GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQ-------AAELEAL 54

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA---NTPLKKYDLM 120
           G   +    D+ D    +  V AA + FG +D LVN A    LTD     +T  + +D  
Sbjct: 55  GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAA---GLTDRGTILDTSPELFDRH 111

Query: 121 NQINARGTYL 130
             +N R  + 
Sbjct: 112 FAVNVRAPFF 121

Length = 260

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 11/97 (11%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G  I +TGAS GIG+A A + A+ GA +V  A+  +        + + A  +  AGG+
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRED-------LLDAVADRITRAGGD 90

Query: 67  C--LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              +PC  D+ D  AV + V     + GG+DIL+NNA
Sbjct: 91  AMAVPC--DLSDLDAVDALVADVEKRIGGVDILINNA 125

Length = 293

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGAS G+G   A   A+ GA +V+A++  E   +L         E+E  GG 
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRA-------EIEAEGGA 59

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD--TANTPLKKYDLMNQIN 124
                +D+ D  ++++AV  A  + G IDILVNN S +S T      TP   +D +   N
Sbjct: 60  AHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNN-SGVSTTQKLVDVTP-ADFDFVFDTN 117

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL 165
            RG + V       + +    A +   G  I +N AS   L
Sbjct: 118 TRGAFFVAQEVAKRMIARAKGAGNTKPGGRI-INIASVAGL 157

Length = 258

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G  + +TG +RGIG  IA      GA +V+  + A                V+     
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------------TVDGRPAE 50

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                 D+RD   V + V+A V++ G +D+LVNNA
Sbjct: 51  FHAA--DVRDPDQVAALVDAIVERHGRLDVLVNNA 83

Length = 252

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 21/161 (13%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +TGASRGIG+AIA + A  G +I I                    EV  AG   +    D
Sbjct: 6   VTGASRGIGRAIATELAARGFDIAINDLPD------DDQATEVVAEVLAAGRRAIYFQAD 59

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLMNQINARGTYLV 131
           I +    ++ ++ A + FG +D LVNNA  +     D  +     +D +  IN RG + +
Sbjct: 60  IGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFL 119

Query: 132 KASQGLEIQSAVNAAVDK---FGGID---ILVNNASAISLT 166
                   Q+     V++   F G     I V + +A  ++
Sbjct: 120 T-------QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVS 153

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              +TGA+ GIG AIA +  K+G  + + A+  E    L  T+    KE+ +AG      
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEE---GLATTV----KELREAGVEADGR 57

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             D+R    +++ V AAV ++G ID+LVNNA
Sbjct: 58  TCDVRSVPEIEALVAAAVARYGPIDVLVNNA 88

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 3e-11
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 4/124 (3%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
            +    +    +AA   FG ID+LVNNA  + L   A+  L+ +D     N RG ++V +
Sbjct: 64  VADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLR 123

Query: 193 KCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
           +   +L       I+N+S   ++       +  Y  SK  +      +A E +G  I VN
Sbjct: 124 EAARHLG--QGGRIINLS--TSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVN 179

Query: 253 ALWP 256
           A+ P
Sbjct: 180 AVAP 183

Length = 245

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           ++S  T+ +TG SRG+G AIA   A++GA +V+    +E          +A    ++ G 
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSED---------AAEALADELGD 52

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFG-GIDILVNNA 101
             +    D+ D   VQ+    A + FG  I  +VNNA
Sbjct: 53  RAIALQADVTDREQVQAMFATATEHFGKPITTVVNNA 89

Length = 253

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 3e-11
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 10/91 (10%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           T  ITG S G G+A+A  A   G  +V   ++            + A          L  
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA----------ARADFEALHPDRALAR 55

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           ++D+ D  A+ + V  A   FG ID+LVNNA
Sbjct: 56  LLDVTDFDAIDAVVADAEATFGPIDVLVNNA 86

Length = 277

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 3e-11
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 15/88 (17%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +TGAS GIG+A A K A+ G  +              GT  + A+     G   L    D
Sbjct: 9   VTGASSGIGRATAEKLARAGYRVF-------------GTSRNPARAAPIPGVELLEL--D 53

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           + D+ +VQ+AV+  + + G ID+LVNNA
Sbjct: 54  VTDDASVQAAVDEVIARAGRIDVLVNNA 81

Length = 270

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 62.5 bits (152), Expect = 4e-11
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 7/118 (5%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G    +TG+S+GIG A+A   A+ GA +++  +      KL      AA+ ++  G +
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPA---KLAA----AAESLKGQGLS 60

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                 D+ D  AV++A++A   + G IDILVNNA     T   + P   ++ + + N
Sbjct: 61  AHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTN 118

Length = 255

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 63.0 bits (153), Expect = 4e-11
 Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV--- 60
            G+L G    ITGA  GIG+A A+  A++GA+I +     E            A EV   
Sbjct: 50  FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEE---------QDAAEVVQL 100

Query: 61  -EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            +  G   +    D++DE   +  V  AV + GG+DILVN A
Sbjct: 101 IQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIA 142

Length = 300

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 64.2 bits (157), Expect = 4e-11
 Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 21/105 (20%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI-------AAKTAEPHPKLPGTIYSA 56
            G  SG  + +TGA  GIG+  AL  A++GA +V        A +TAE            
Sbjct: 310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAE------------ 357

Query: 57  AKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              +  AG       VD+ D  A+++       + G  DI+VNNA
Sbjct: 358 --LIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNA 400

Length = 582

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 19/168 (11%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            +L G    +TG +RG+G A A     +GA +V++    E           AA E+ DA 
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQA-------AAAELGDAA 53

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                  +D+ DE    + V+ A + FG +D+LVNNA  ++      T L+++  +  IN
Sbjct: 54  ---RFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDIN 110

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTP 172
             G +       L  ++ +    +  GG   ++N +S   L       
Sbjct: 111 LTGVF-------LGTRAVIPPMKEAGGG--SIINMSSIEGLVGDPALA 149

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 61.9 bits (151), Expect = 6e-11
 Identities = 49/176 (27%), Positives = 68/176 (38%), Gaps = 24/176 (13%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
               V AA   FG  D+LVNNASA   T         +  +  IN +  YL+ Q     L
Sbjct: 65  CADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAFARRL 124

Query: 199 KKSNHAHILNIS------PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
             S +  I+NI       P           + AY +SK  +       A E    NI VN
Sbjct: 125 AGSRNGSIINIIDAMTDRPL--------TGYFAYCMSKAALEGLTRSAALEL-APNIRVN 175

Query: 253 ALWPRTAIYTAAIEMLTGGSADAKATS---RKPEI--MADAAYYILSSNPPSLTGQ 303
            + P   +     +M      +A       R+P    +ADA  ++L SN   +TGQ
Sbjct: 176 GIAPGLILL--PEDMDAEYRENALRKVPLKRRPSAEEIADAVIFLLDSN--YITGQ 227

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 61.9 bits (151), Expect = 6e-11
 Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 12/121 (9%)

Query: 143 VNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
           V A V  FG +D LVNNAS+   T   + T  +  DL    N +  + +SQ   P L+K 
Sbjct: 76  VAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFA-SNLKAPFFLSQAAAPQLRK- 133

Query: 202 NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA------LW 255
               I+NI+      P   K +  Y  +K  + M    +A E     + VNA      LW
Sbjct: 134 QRGAIVNITDIHAERP--LKGYPVYCAAKAALEMLTRSLALEL-APEVRVNAVAPGAILW 190

Query: 256 P 256
           P
Sbjct: 191 P 191

Length = 249

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 61.6 bits (150), Expect = 6e-11
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 11/115 (9%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              +TGASRGIG  IA   A+DG  + +  +  E               +  +GG+    
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPE-----------DLAALSASGGDVEAV 50

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             D RD    ++ V+A  D+FG ID+LV+NA     T        + +    IN 
Sbjct: 51  PYDARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINV 105

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 7e-11
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M +   L+G  I ITG+++GIG  +A   A+ GA I+I   TAE           A  ++
Sbjct: 1   MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAEL-------AVAKL 53

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
              G        ++  +  V++A+       G ID+L+NNA           P ++++ +
Sbjct: 54  RQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDV 113

Query: 121 NQINARGTYLV 131
             +N    +LV
Sbjct: 114 IAVNQTAVFLV 124

Length = 254

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 38/104 (36%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
             N   L G    ITGAS GIG AIA   AK GA IV      E        +       
Sbjct: 2   SENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQE-------LVDKGLAAY 54

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
            + G      + D+ DE  VQ+ V+    + G IDILVNNA  I
Sbjct: 55  RELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGII 98

Length = 265

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 9e-11
 Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 15/182 (8%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +++ V+    ++G +D+LVNNA          T    +D + ++N  G +L ++  +P +
Sbjct: 68  VEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIM 127

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
           ++     I+N +  L L     +   AY  SK  ++     MA +   D I VNA+ P  
Sbjct: 128 QRQGGGSIVNTASQLALAG--GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAP-G 184

Query: 259 AIYTAAIEMLTGGSAD---AKATSR---------KPEIMADAAYYILSSNPPSLTGQFLI 306
            I T     +    AD    +   R           E +A AA ++ S      TG  L+
Sbjct: 185 TIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLV 244

Query: 307 DD 308
            D
Sbjct: 245 VD 246

Length = 252

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 9e-11
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L+G  + ITGAS+GIG A A   A +G ++ + A+ A+        + + A ++  A G
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDAD-------ALEALAADLRAAHG 56

Query: 66  NCLPC-IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
             +    +D+    A +     A    G IDILVNNA AI
Sbjct: 57  VDVAVHALDLSSPEAREQLAAEA----GDIDILVNNAGAI 92

Length = 259

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 60.9 bits (149), Expect = 1e-10
 Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 31/183 (16%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY-----DLMNQINARGTYLVSQ 192
            +++ + AAV+ FG +DILVNNA       T +  L +      D +  +N  GT+ V +
Sbjct: 68  AVRALIEAAVEAFGALDILVNNAGI-----TRDALLPRMSEEDWDRVIDVNLTGTFNVVR 122

Query: 193 KCLPYLKKSNHAHILNISP--PLNLNPFWFKNHVAYTISKYGMSMCALGM----AEEFKG 246
             LP + K+ +  I+NIS    +  NP        Y+ +K G+    +G     A E   
Sbjct: 123 AALPPMIKARYGRIVNISSVSGVTGNPGQ----TNYSAAKAGV----IGFTKALALELAS 174

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATS----R--KPEIMADAAYYILSSNPPSL 300
             I VNA+ P   I T   E L               R  +PE +A+A  ++ S     +
Sbjct: 175 RGITVNAVAP-GFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYI 233

Query: 301 TGQ 303
           TGQ
Sbjct: 234 TGQ 236

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.0 bits (149), Expect = 1e-10
 Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 9/174 (5%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            +++AV AAV++FG IDILVNNA        A+    ++D +  +N  G + + +  +P 
Sbjct: 70  ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP 129

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           ++K     I+NIS  +   P W      Y  +K G+      +A E     I VN + P 
Sbjct: 130 MRKQRGGRIVNIS-SVAGLPGWPGR-SNYAAAKAGLVGLTKALARELAEYGITVNMVAP- 186

Query: 258 TAIYTAAIEMLTGGSADAKA------TSRKPEIMADAAYYILSSNPPSLTGQFL 305
             I T   E     + +AK        S  PE +A A  ++ S     +TGQ +
Sbjct: 187 GDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVI 240

Length = 249

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +QSA   AV +FGG+DI+V+NA   + +  A T L+ ++    IN  G +LVS++    +
Sbjct: 64  VQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFRIM 123

Query: 199 KKSNHAHIL--NISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           K       +  N S    + P    N  AY+ +K   +  A  +A E   D I VN + P
Sbjct: 124 KSQGIGGNIVFNASKNA-VAP--GPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVNP 180

Query: 257 RTAIYTAAIEMLTGGSADAKATSRK 281
                 + I    G    A+A +  
Sbjct: 181 DAVFRGSKIW--EGVWRAARAKAYG 203

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
           A    + ++ V+A  D+FG ID+LV+NA     T        + +    IN      +++
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTR 113

Query: 193 KCLPYLKKSNHAHILNISP-----PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD 247
             LP L+++    ++ ++       L  N         Y+ SK+ +   A  + +E    
Sbjct: 114 ALLPALREAGSGRVVFLNSLSGKRVLAGN-------AGYSASKFALRALAHALRQEGWDH 166

Query: 248 NIAVNALWP 256
            + V+A+ P
Sbjct: 167 GVRVSAVCP 175

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +  G    +TGAS GIG A+A    + G  +V  A+  +    L       A E + AG 
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEAL-------AAECQSAGY 55

Query: 66  NCL-PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             L P   D+ +E  + S  +A   +  G+D+ +NNA
Sbjct: 56  PTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNA 92

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 16/130 (12%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           + +L+G    ITG   GIG A A + A +GA +V+     E          +     ++ 
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPE----------AGKAAADEV 51

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA---NTPLKKYDLM 120
           GG  +P   D+ DE AV +  + A + +G +DI  NNA  IS  +     NT L  +  +
Sbjct: 52  GGLFVP--TDVTDEDAVNALFDTAAETYGSVDIAFNNA-GISPPEDDSILNTGLDAWQRV 108

Query: 121 NQINARGTYL 130
             +N    YL
Sbjct: 109 QDVNLTSVYL 118

Length = 255

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 16/130 (12%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-G 64
           +L G    +TG + GIG++I     K GA + I     +             + V D+ G
Sbjct: 15  RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDD-----------LGQNVCDSLG 63

Query: 65  GNCLPCIV--DIRDEHAVQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLM 120
           G    C    D+  E  V  AV+  VDKFG +DI+VNNA  +     D  N  L +++ +
Sbjct: 64  GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKV 123

Query: 121 NQINARGTYL 130
             +N +G +L
Sbjct: 124 FDVNVKGVFL 133

Length = 280

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GG 65
           L+G    +TG +  IG A+A      GA + I    A+               V  + G 
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDAD-----------NGAAVAASLGE 52

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                  DI D+ A++ AV   V +FG +DILVN A
Sbjct: 53  RARFIATDITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 6/131 (4%)

Query: 6   KLSGLTIFITGASR--GIGKAIALKAAKDGANIV----IAAKTAEPHPKLPGTIYSAAKE 59
            L      +TGASR  GIG A+  + A  G +I            P            +E
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           +E  G  C    +D+   +A      A  ++ G   IL+NNA+  + T       ++ D 
Sbjct: 62  IESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDK 121

Query: 120 MNQINARGTYL 130
              +N R T L
Sbjct: 122 HYAVNVRATML 132

Length = 256

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 54/242 (22%), Positives = 84/242 (34%), Gaps = 77/242 (31%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANI--VIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
            I +TGASRGIG+A+A +  K G+    V+ A++ EP  +L        KE    G    
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQEL--------KEELRPGLRVT 52

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL--MNQINAR 126
               D+ D   V+  + A     G  D+L+NNA ++        P+ K +   ++++   
Sbjct: 53  TVKADLSDAAGVEQLLEAIRKLDGERDLLINNAGSL-------GPVSKIEFIDLDELQK- 104

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                                         +N  S + LT T     KK  L      + 
Sbjct: 105 ---------------------------YFDLNLTSPVCLTSTLLRAFKKRGL------KK 131

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--WFKNHVAYTISKYGMSMCALGMAEEF 244
           T                  ++N+S    +NPF  W      Y  SK    M    +A E 
Sbjct: 132 T------------------VVNVSSGAAVNPFKGW----GLYCSSKAARDMFFRVLAAEE 169

Query: 245 KG 246
             
Sbjct: 170 PD 171

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 6/131 (4%)

Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 187
            Y +  S    I   +   +++FG  D+L+NNA           PL  +  + Q+N    
Sbjct: 59  AYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSV 118

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNLNPF--WFKNHVAYTISKYGMSMCALGMAEEFK 245
           +      LP ++      I+N+S     N F  W     AY +SK  ++     +AEE +
Sbjct: 119 FQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWG----AYCVSKAALAAFTKCLAEEER 174

Query: 246 GDNIAVNALWP 256
              I V  +  
Sbjct: 175 SHGIRVCTITL 185

Length = 241

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 21/181 (11%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN--QINARGTYLVSQKCL 195
           ++++ V A V +FGGI ILVNNA         + P+ + D     ++N    + +SQ C 
Sbjct: 62  DLEAVVKATVSQFGGITILVNNAGG-GGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 196 PYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL-----GMAEEFKGDNIA 250
           P+++K+    ILNIS   + N           I+ YG S  A+      +A +     I 
Sbjct: 121 PHMQKAGGGAILNISSMSSENK-------NVRIAAYGSSKAAVNHMTRNLAFDLGPKGIR 173

Query: 251 VNALWPRT----AIYTAAIEMLTGGSADAKATSR--KPEIMADAAYYILSSNPPSLTGQF 304
           VNA+ P      A+ +     +           R  +PE +A+AA ++ S     ++GQ 
Sbjct: 174 VNAVAPGAVKTDALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQV 233

Query: 305 L 305
           L
Sbjct: 234 L 234

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L    + +TGAS GIG+A+A   A  GA +++  + AE    L   +           G
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--------PYPG 53

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                + D+  E   + AV A   + GGI++L+NNA
Sbjct: 54  RHRWVVADLTSEAGRE-AVLARAREMGGINVLINNA 88

Length = 263

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G    +TGASRGIG+AIA   A+ GA+++++++  +          + A  +  AGG 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG-------CQAVADAIVAAGGK 58

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKKYDLMNQINA 125
                  I +   + +      ++ G +DILVNNA+A        +T L  +     +N 
Sbjct: 59  AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNI 118

Query: 126 RGTY--------LVKASQGLEI--QSAVNAAV-DKFGGIDILVNNASAISLT 166
           RG +        L+K   G  I   ++VN      F GI   +  A+ IS+T
Sbjct: 119 RGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGI-YSITKAAVISMT 169

Length = 252

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 5   GKLSGLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAEPHPK-LPGTIYSAAKEVED 62
           G L+G  + +T A+  GIG A A +A ++GA +VI+    + H + L  T    A E+  
Sbjct: 13  GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVIS----DIHERRLGETADELAAELGL 68

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                + C  D+  E  V + ++AAV++ G +D+LVNNA
Sbjct: 69  GRVEAVVC--DVTSEAQVDALIDAAVERLGRLDVLVNNA 105

Length = 262

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           KL+G T+ ITG + GIG A+A K  + G  ++I  +  E              E +    
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREE-----------RLAEAKKELP 50

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASA---ISLTDTANTPLKKYDLMNQ 122
           N    ++D+ D  +V++   A + ++  +DIL+NNA     I L D A+  L K D    
Sbjct: 51  NIHTIVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASD-LDKADTEID 109

Query: 123 INARGT-YLVKA 133
            N  G   L+KA
Sbjct: 110 TNLIGPIRLIKA 121

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G  + ITG +RGIG A A   A  GA + I                  AKE     G
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEA-----------LAKETAAELG 50

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             +   +D+ D  +  + ++A     G ID+LVNNA  + +    + P      +  +N 
Sbjct: 51  LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNV 110

Query: 126 RG 127
            G
Sbjct: 111 YG 112

Length = 273

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L    + +TG + GIG AI+L+ A++GA  VI  ++A      P   +  A+E+     
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA------PDDEF--AEELRALQP 55

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                 VD+ D+   + AV   V KFG ID LVNNA
Sbjct: 56  RAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNA 91

Length = 258

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 8   SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
            G    +TG++ GIG  IA   A  GANIV+     +           AAK     G   
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGF-GDAAEIEAVRAGLAAKH----GVKV 55

Query: 68  LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           L    D+    A++  V  A  +FGG+DILVNNA    +    + P +K+D +  +N
Sbjct: 56  LYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALN 112

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 4e-10
 Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
            G L G  + ITGAS GIG+A A   A+ GA +V+AA+  E        + + A+E    
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEE-------ALQAVAEECRAL 54

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G   L    D+ D   V++    A    G ID+ VNN 
Sbjct: 55  GAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNV 92

Length = 330

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           S+   I+  V  A  +FGG+DILVNNA    +    + P +K+D +  +N    +  ++ 
Sbjct: 63  SKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRL 122

Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            LP++KK     I+NI+    L     K+  AY  +K+G+      +A E  G  +  NA
Sbjct: 123 ALPHMKKQGWGRIINIASVHGLVASANKS--AYVAAKHGVVGLTKVVALETAGTGVTCNA 180

Query: 254 LWP 256
           + P
Sbjct: 181 ICP 183

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 59.1 bits (143), Expect = 5e-10
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +  G  + +TGA++GIG+ +A + A +GA  V+    +E        ++    E+  AG 
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGAR-VLLVDRSE-------LVHEVLAEILAAGD 52

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                  D+      Q  V AAV++FG +D+L+NN 
Sbjct: 53  AAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNV 88

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 60.6 bits (147), Expect = 5e-10
 Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 23/196 (11%)

Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI--SLTDTANTPLKKYDLMNQINARG 186
             +  S   +I+        +FG ID+LVNNA     ++T T +T L+++  +  IN  G
Sbjct: 56  LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTG 115

Query: 187 TYLVSQKCLPYLKKSNH-AHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEE 243
            YLV+++ L  + +  H A I+N++    L   P       AY+ SK  +      +A E
Sbjct: 116 AYLVAREALRLMIEQGHGAAIVNVASGAGLVALP----KRTAYSASKAAVISLTRSLACE 171

Query: 244 FKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSR--------KPEIMADAAYYI 292
           +    I VNA+ P   RT +     E+   G  D  A           +PE +A+A +++
Sbjct: 172 WAAKGIRVNAVLPGYVRTQM---VAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFL 228

Query: 293 LSSNPPSLTGQFLIDD 308
            S     +TG  L+ D
Sbjct: 229 ASDQASYITGSTLVVD 244

Length = 520

>gnl|CDD|225794 COG3255, COG3255, Putative sterol carrier protein [Lipid metabolism]

 Score = 56.7 bits (137), Expect = 7e-10
 Identities = 29/102 (28%), Positives = 42/102 (41%)

Query: 304 FLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKN 363
           F I  E  +       +        + G          G+  +       D TL  +  N
Sbjct: 23  FEIPKENREKFGGKPAEGLAFKLQLSLGKCLGVEVIDGGTVSKADAPDPPDFTLGASLDN 82

Query: 364 FIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSK 405
           ++ +  GKL PTSAFMTGKLK+ G +  AMKL  ++ A    
Sbjct: 83  WLDIITGKLNPTSAFMTGKLKVEGGMLSAMKLRYVIAAFAMV 124

Length = 134

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 58.7 bits (142), Expect = 7e-10
 Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 10/122 (8%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           G    +TG   GIGK I L   + G  +V A    E            A   E  G N  
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE----------RGADFAEAEGPNLF 50

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
               D+ DE  V+  V A ++K G ID+LVNNA+  S    ++  L+++D +  +N  G 
Sbjct: 51  FVHGDVADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGP 110

Query: 129 YL 130
           Y 
Sbjct: 111 YE 112

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 12/141 (8%)

Query: 122 QINARG--TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 177
           +I A G     V+A  S   ++    +AA   FGG+DILVNNA  +     A T  +++D
Sbjct: 47  EIEAAGGKAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFD 106

Query: 178 LMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN--LNPFWFKNHVAYTISKYGMSM 235
            M  +N +G + V Q+    L+      I+NIS  L     P    N+ AY  SK  +  
Sbjct: 107 RMFTVNTKGAFFVLQEAAKRLRDG--GRIINISSSLTAAYTP----NYGAYAGSKAAVEA 160

Query: 236 CALGMAEEFKGDNIAVNALWP 256
               +A+E  G  I VNA+ P
Sbjct: 161 FTRVLAKELGGRGITVNAVAP 181

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 58.3 bits (141), Expect = 1e-09
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 119 LMNQINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK 174
           L +++  RG      +        + +A+  A +K G IDILVNNA    L    +   +
Sbjct: 45  LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDE 104

Query: 175 KYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISP---PLNLNPFWFKNHVAYTISKY 231
             D    IN +G + V++  LP +       I+ +S     +  +P       AY ++K 
Sbjct: 105 DRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADP----GETAYALTKA 160

Query: 232 GMSMCALGMAEEFKGDNIAVNALWP 256
            +      +A E+    I VNA+ P
Sbjct: 161 AIVGLTKSLAVEYAQSGIRVNAICP 185

Length = 263

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 34/192 (17%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASA---ISLTDTANTPLKKYDLMNQI--NARGTYLVSQ 192
           + + AV   V KFG ID LVNNA     + L             +  +  N    Y+++ 
Sbjct: 69  QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGRE------AFVASLERNLIHYYVMAH 122

Query: 193 KCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM----AEEFKGDN 248
            CLP+LK S  A I+NIS    L          Y  +K       L +    A     D 
Sbjct: 123 YCLPHLKASRGA-IVNISSKTALTG--QGGTSGYAAAKGAQ----LALTREWAVALAKDG 175

Query: 249 IAVNALWPR---TAIYTAAIEMLTGGSADAKATSRK---------PEIMADAAYYILSSN 296
           + VNA+ P    T +Y   I       A   A + K          E +AD A ++LS  
Sbjct: 176 VRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSER 235

Query: 297 PPSLTGQFLIDD 308
               TGQ+L  D
Sbjct: 236 SSHTTGQWLFVD 247

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 72/314 (22%), Positives = 111/314 (35%), Gaps = 90/314 (28%)

Query: 8   SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
           S   + ITG +RGIG+A+A + A  G  ++I  + AE   KL              G   
Sbjct: 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEA----------LGDEH 317

Query: 68  LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 127
           L    DI DE AV+S                                       QI AR 
Sbjct: 318 LSVQADITDEAAVES------------------------------------AFAQIQAR- 340

Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI-----SLTDTANTPLKKYDLMNQI 182
                                 +G +D+LVNNA        SL  +A    + YD    +
Sbjct: 341 ----------------------WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYD----V 374

Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
           N  G +  ++     + +     I+N+    +L     +N  AY  SK  ++M +  +A 
Sbjct: 375 NLSGAFACARAAARLMSQG--GVIVNLGSIASLLALPPRN--AYCASKAAVTMLSRSLAC 430

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK--------PEIMADAAYYILS 294
           E+    I VN + P      A + +   G AD  +  R+        PE +A+A  ++ S
Sbjct: 431 EWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLAS 490

Query: 295 SNPPSLTGQFLIDD 308
                + G  L  D
Sbjct: 491 PAASYVNGATLTVD 504

Length = 520

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L   T  +TG   GIG A   + A++GA + +     E   K+   I          GGN
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI-------RAKGGN 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                 DI D  +V +AV AA    G +D+LVNNA
Sbjct: 54  AQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNA 88

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G    +TG + G+G+  A+  AK GA+I+I             T     + +E  G 
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN----WDETR----RLIEKEGR 63

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
                 VD+    + +  V  A+++FG IDILVNNA  I
Sbjct: 64  KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTI 102

Length = 258

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 59/246 (23%), Positives = 94/246 (38%), Gaps = 70/246 (28%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +TGA+ GIGKA A + AK G N+++ ++T E   KL     + AKE              
Sbjct: 6   VTGATDGIGKAYAEELAKRGFNVILISRTQE---KLD----AVAKE-------------- 44

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA 133
           I +++ V++    A D               S  D     ++K                 
Sbjct: 45  IEEKYGVETKT-IAAD--------------FSAGDDIYERIEKE---------------- 73

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNAS-AISLTDT-ANTPLKKYDLMNQINARGTYLVS 191
            +GL+I               ILVNN   + S+ +    TP  +   +  +N   T  ++
Sbjct: 74  LEGLDI--------------GILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMT 119

Query: 192 QKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
           +  LP + K     I+NIS    L P        Y+ SK  +   +  + EE+K   I V
Sbjct: 120 RLILPGMVKRKKGAIVNISSFAGLIPTPLLAT--YSASKAFLDFFSRALYEEYKSQGIDV 177

Query: 252 NALWPR 257
            +L P 
Sbjct: 178 QSLLPY 183

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKEVED 62
           L+G    +TGA+RGIG AIA   A+DGA++V     AA  A         + + A  V  
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA---------LAAVANRV-- 256

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            GG  L    DI    A         ++ GG+DI+V+NA
Sbjct: 257 -GGTALAL--DITAPDAPARIAEHLAERHGGLDIVVHNA 292

Length = 450

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              + GA  G+G AIA + A +G ++ +AA+       L   I      + DAGG+    
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDI------IRDAGGSAKAV 54

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
             D RDE  V +  +   ++ G +++LV NA A        T  + ++ + ++ A G +L
Sbjct: 55  PTDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFL 114

Query: 131 V 131
            
Sbjct: 115 A 115

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 3/119 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
                ++  + KFG +DILVNNA  ++     +  +++YD +  +N R    +++  +P+
Sbjct: 69  GQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTKLAVPH 128

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           L K+    I+N+S         F   + Y ISK  +       A E     + VN++ P
Sbjct: 129 LIKTKGE-IVNVSSVAGGRS--FPGVLYYCISKAALDQFTRCTALELAPKGVRVNSVSP 184

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 16/123 (13%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           G    IT A++GIG+AIAL  A++GAN VIA             I     +  + G    
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGAN-VIAT-----------DINEEKLKELERGPGIT 49

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
             ++D+ D+  V     A   + G ID+L N A  +      +     +D    +N R  
Sbjct: 50  TRVLDVTDKEQVA----ALAKEEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSM 105

Query: 129 YLV 131
           YL+
Sbjct: 106 YLM 108

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 46/180 (25%), Positives = 70/180 (38%), Gaps = 18/180 (10%)

Query: 141 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK- 199
            A   A+   G +D+LVNNA+   L        + +D    +N R    VSQ     +  
Sbjct: 65  DATEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVARGMIA 124

Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA 259
           +     I+N+S   +       NH  Y  +K  + M    MA E     I VN++ P T 
Sbjct: 125 RGVPGSIVNVSSQASQRAL--TNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNP-TV 181

Query: 260 IYTAAIEMLTGGSAD----AKATSRKP-------EIMADAAYYILSSNPPSLTGQFLIDD 308
           + T   +M     +D     K  +R P       E + +A  ++LS      TG  L  D
Sbjct: 182 VMT---DMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTTGSTLPVD 238

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            +G    ITGA+ G G A A   A  G  +V+A    +   +       A  E+   G  
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDR-------AVAELRAQGAE 56

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            L    D+ D   V++  +AA+++FG + +L NNA
Sbjct: 57  VLGVRTDVSDAAQVEALADAALERFGAVHLLFNNA 91

Length = 287

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 7/90 (7%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + ITGAS GIG+A+A + AK G N+ +AA+  +   +L   + +    VE         I
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVE-------I 53

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +D+ DE   Q  +     + GG+D+++ NA
Sbjct: 54  LDVTDEERNQLVIAELEAELGGLDLVIINA 83

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 57.0 bits (137), Expect = 3e-09
 Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 72/307 (23%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGASRGIG+AIA++ A DGA  ++A            TI    +E+E  GG 
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETI----REIESNGGK 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                            + A ++   G+  LV                    L N++  R
Sbjct: 58  AF--------------LIEADLNSIDGVKKLVEQ------------------LKNELQIR 85

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
               V  S+                 IDILVNNA   +     NT  + +D +  +N + 
Sbjct: 86  ----VGTSE-----------------IDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKA 124

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPP-LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
            + + Q+ LP L+      ++NIS   + L    F   +AY +SK  ++   L +A+   
Sbjct: 125 PFFLIQQTLPLLRA--EGRVINISSAEVRLG---FTGSIAYGLSKGALNTMTLPLAKHLG 179

Query: 246 GDNIAVNALWP---RTAIYTAAIE--MLTGGSADAKATSR--KPEIMADAAYYILSSNPP 298
              I VN + P   +T I    ++   +   + ++    R  + E +ADA  ++ SS+  
Sbjct: 180 ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSR 239

Query: 299 SLTGQFL 305
            +TGQ +
Sbjct: 240 WVTGQII 246

Length = 254

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 16/101 (15%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M    +L+G    +TG ++GIG A   +  + GA +V  A++  P     G  + AA   
Sbjct: 1   MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR-PDDLPEGVEFVAA--- 56

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                       D+       +   A +++ GG+DILV+  
Sbjct: 57  ------------DLTTAEGCAAVARAVLERLGGVDILVHVL 85

Length = 260

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 8/97 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G    +TG SRGIG AIA   A+ GA++ I   +A    +        A+E+    G
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEE-------KAEELAKKYG 57

Query: 66  -NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                   D+  + +V+         FG IDIL+ NA
Sbjct: 58  VKTKAYKCDVSSQESVEKTFKQIQKDFGKIDILIANA 94

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 30/163 (18%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           + G  + +G  +    A++G  + +A   +E    +   I       E   G       D
Sbjct: 7   VIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI-----NAEYGEGMAYGFGAD 61

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV-- 131
              E +V +      + FG +D+LV NA         +  L  +D   Q+N  G +L   
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAR 121

Query: 132 --------KASQGLEIQ-------------SAVNAAVDKFGGI 153
                      QG  IQ             S  +AA  KFGG+
Sbjct: 122 EFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAA--KFGGV 162

Length = 259

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 10/102 (9%)

Query: 10  LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
           L +FITGAS GIG+A+A + A+ GA + + A+  +        + + A  +         
Sbjct: 3   LKVFITGASSGIGQALAREYARQGATLGLVARRTDA-------LQAFAARLP-KAARVSV 54

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISL-TDTA 110
              D+RD  A+ +A    +   G  D+++ NA  IS+ T T 
Sbjct: 55  YAADVRDADALAAAAADFIAAHGLPDVVIANA-GISVGTLTE 95

Length = 257

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 56.8 bits (138), Expect = 5e-09
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    ITG    +G A+A + A+ GA + I  +  E    +         E++ AGG 
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAV-------VAEIKAAGGE 60

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            L    D+ D+ +++ A    ++ FG  DIL+N A
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGA 95

Length = 278

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 7/101 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
             NT  LSG    +TGA+ G+G+A AL  A+ GA +V+     +    L  +      E+
Sbjct: 4   TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVV----NDVASALDAS--DVLDEI 57

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             AG   +    DI    A    + A     GG+DI+VNNA
Sbjct: 58  RAAGAKAVAVAGDISQ-RATADELVATAVGLGGLDIVVNNA 97

Length = 306

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 19/188 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++++ ++ AV+KFG  D++VNNA    +T       +    +  +N  G     Q     
Sbjct: 66  DVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAAARQ 125

Query: 198 LKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            KK  H   I+N S    +    F N  AY+ SK+ +       A+E     I VNA  P
Sbjct: 126 FKKLGHGGKIINASSIAGVQG--FPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYAP 183

Query: 257 RTA-------IYTAAIEMLTGGSADAKA---------TSRKPEIMADAAYYILSSNPPSL 300
                     I     E+      +  A            +PE +A    ++ S +   +
Sbjct: 184 GIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLASEDSDYI 243

Query: 301 TGQFLIDD 308
           TGQ ++ D
Sbjct: 244 TGQTILVD 251

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP- 196
           +I+      +++FG +DILVNNA A       + P++ +D +  +N RG +L+SQ     
Sbjct: 75  DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKR 134

Query: 197 YLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
            +    +  I+N++    L  NP    + +AY  SK  +      +A E+    I VNA+
Sbjct: 135 SMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAI 194

Query: 255 WP 256
            P
Sbjct: 195 AP 196

Length = 259

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 56.3 bits (136), Expect = 6e-09
 Identities = 54/250 (21%), Positives = 90/250 (36%), Gaps = 54/250 (21%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L      ITG +  +G A+A   A+ GA +    +  E            AKE+   GG 
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQE-------KGDKVAKEITALGGR 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D+ D  +++ A    V +FG +DIL+N A         N P             
Sbjct: 56  AIALAADVLDRASLERAREEIVAQFGTVDILINGAG-------GNHP------------D 96

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
            T   +  +    Q+        F  +D                   + ++ +  +N  G
Sbjct: 97  ATTDPEHYEPETEQN--------FFDLDE------------------EGWEFVFDLNLNG 130

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
           ++L SQ     + +     I+NIS     +P       AY+ +K  +S     +A EF  
Sbjct: 131 SFLPSQVFGKDMLEQKGGSIINISSMNAFSPL--TKVPAYSAAKAAVSNFTQWLAVEFAT 188

Query: 247 DNIAVNALWP 256
             + VNA+ P
Sbjct: 189 TGVRVNAIAP 198

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 13/84 (15%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAIS----LTDTANTPLKKY-------DLMNQINARG 186
           E+   V   ++KFG ID LVNNA  I+    L D    P  KY       D M  IN +G
Sbjct: 63  EVNHTVAEIIEKFGRIDGLVNNA-GINIPRLLVD-EKDPAGKYELNEAAFDKMFNINQKG 120

Query: 187 TYLVSQKCLPYLKKSNHAHILNIS 210
            +L+SQ     + K +   I+N+S
Sbjct: 121 VFLMSQAVARQMVKQHDGVIVNMS 144

Length = 266

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 56.0 bits (135), Expect = 7e-09
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 118 DLMNQINARGTYLVKASQGL----EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
           + + Q+ A G   +  +  L     I + +  AV +FG IDILVNNA  I   D      
Sbjct: 47  ETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSE 106

Query: 174 KKYDLMNQINARGTYLVSQKCLP-YLKKSNHAHILNISPPLNLNPFWFKNHV---AYTIS 229
           K +D +  +N +  + +SQ     ++ + N   I+NI+  L+     F+  +   +YT S
Sbjct: 107 KDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS-----FQGGIRVPSYTAS 161

Query: 230 KYGMSMCALGMAEEFKGDNIAVNALWP 256
           K G+      MA E+   NI VNA+ P
Sbjct: 162 KSGVMGVTRLMANEWAKHNINVNAIAP 188

Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 57.2 bits (138), Expect = 8e-09
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 12/122 (9%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + +TGA+ GIG+A   + A+ G  +V+A +  E           A +  +  G +     
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRNVE----------RARERADSLGPDHHALA 57

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI--SLTDTANTPLKKYDLMNQINARGTY 129
           +D+ DE  ++        +FG ID+LVNNA     ++T T +T L+++  +  IN  G Y
Sbjct: 58  MDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAY 117

Query: 130 LV 131
           LV
Sbjct: 118 LV 119

Length = 520

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 10/123 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +++ AV+A  + FGG+D LVNNA    +        +++ L+   N  G +    K  P 
Sbjct: 60  DVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPA 119

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE----EFKGDNIAVNA 253
           L +     I+N+      N   FK   AY  SK+G+    LG++E    + +  NI V  
Sbjct: 120 LLRRGGGTIVNVGSLAGKNA--FKGGAAYNASKFGL----LGLSEAAMLDLREANIRVVN 173

Query: 254 LWP 256
           + P
Sbjct: 174 VMP 176

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 17/180 (9%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
            + V+ A + FG +D+LVNNA  ++      T L+++  +  IN  G +L ++  +P +K
Sbjct: 67  TAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRAVIPPMK 126

Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSM----CALGMAEEFKGDNIAVNALW 255
           ++    I+N+S    L         AY  SK  +       AL  A   +G  I VN++ 
Sbjct: 127 EAGGGSIINMSSIEGLVG--DPALAAYNASKGAVRGLTKSAALECAT--QGYGIRVNSVH 182

Query: 256 PRTAIYTAAIEML--TGGSADAKATSR-----KPEIMADAAYYILSSNPPSLTG-QFLID 307
           P   IYT   + L    G       +      +P+ +A A  Y+ S     +TG + ++D
Sbjct: 183 P-GYIYTPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDESSFVTGSELVVD 241

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 7/94 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              ITG +R IG AIA      G  + I    +             A E+          
Sbjct: 8   VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADA------LAAELNALRPGSAAA 61

Query: 71  IV-DIRDEHAVQSAVNAAVDKFGGIDILVNNASA 103
           +  D+ D  A+   V A V  FG +D LVNNAS+
Sbjct: 62  LQADLLDPDALPELVAACVAAFGRLDALVNNASS 95

Length = 249

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 55.1 bits (132), Expect = 1e-08
 Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 71/308 (23%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGASRGIG+AIA + A DGA  ++A        +   T+Y    E++  GG+
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVY----EIQSNGGS 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                           ++ A ++   G++ L ++                  L N++  R
Sbjct: 56  AF--------------SIGANLESLHGVEALYSS------------------LDNELQNR 83

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                                 KF   DIL+NNA          T  + +D M  +NA+ 
Sbjct: 84  ------------------TGSTKF---DILINNAGIGPGAFIEETTEQFFDRMVSVNAKA 122

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
            + + Q+ L  L+  +++ I+NIS           + +AY+++K  ++     +A++   
Sbjct: 123 PFFIIQQALSRLR--DNSRIINISSAAT--RISLPDFIAYSMTKGAINTMTFTLAKQLGA 178

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATS-------RKPEIMADAAYYILSSNPPS 299
             I VNA+ P         E+L+       AT+        + E +AD A ++ S +   
Sbjct: 179 RGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 238

Query: 300 LTGQFLID 307
           +TGQ LID
Sbjct: 239 VTGQ-LID 245

Length = 252

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 27/194 (13%)

Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY--DLMNQINA-- 184
           Y V  S   +++   +   ++FG +D+L NNA      D A   + +Y  D+ ++I A  
Sbjct: 59  YHVDISDEQQVKDFASEIKEQFGRVDVLFNNAG----VDNAAGRIHEYPVDVFDKIMAVD 114

Query: 185 -RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
            RGT+L+++  LP L       I+N S         +++   Y  +K  +      +A E
Sbjct: 115 MRGTFLMTKMLLP-LMMEQGGSIINTSSFSGQAADLYRS--GYNAAKGAVINFTKSIAIE 171

Query: 244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSAD-AKATSR-------------KPEIMADAA 289
           +  D I  NA+ P T I T  ++ LTG S D A  T R             KPE +A   
Sbjct: 172 YGRDGIRANAIAPGT-IETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLV 230

Query: 290 YYILSSNPPSLTGQ 303
            ++ S +   +TG+
Sbjct: 231 VFLASDDSSFITGE 244

Length = 272

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++ +   A  +K+GGID++VNNA   S        L+ +D    IN  G     +  LP 
Sbjct: 63  QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL 122

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            K+     I+NI+    L         +Y ++K G+   +  +  E   D I V+ + P
Sbjct: 123 FKRQKSGRIVNIASMAGLMQGPAM--SSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Length = 270

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 11/179 (6%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +++    A  ++FG +D+LV+NA+A +    +      +D     N +     +Q+    
Sbjct: 62  DVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAKL 121

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           +++     I+ IS   ++      N++A   +K  +      +A E     I VNA+ P 
Sbjct: 122 MRERGGGRIVAISSLGSIRA--LPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSP- 178

Query: 258 TAIYTAAIEMLTGGSADAKATSRK--------PEIMADAAYYILSSNPPSLTGQFLIDD 308
             I T A+          +A +          P+ +ADA  ++ S     +TGQ L+ D
Sbjct: 179 GVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVVD 237

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           T  +TGA+ GIG+A+A +    G  ++     A         + + A  + DA    +P 
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAA-------ALAAFADALGDA--RFVPV 54

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
             D+ D  ++ +A+  A  + G +D+LV NA A       +T    +   N +N    YL
Sbjct: 55  ACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYL 114

Length = 257

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M +  + +   + +TG SRGIG+ I     ++GA +V  A+       L         E+
Sbjct: 1   MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQAL-------ESEL 53

Query: 61  EDAG-GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             AG G+C     D+  E  +++ ++  V++FG ID LVNNA
Sbjct: 54  NRAGPGSCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNA 95

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 19/134 (14%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +T +  GIGKA AL  A+ G +I I   + E   K        A+EV   G       +D
Sbjct: 7   VTASDSGIGKACALLLAQQGFDIGITWHSDEEGAK------ETAEEVRSHGVRAEIRQLD 60

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD-----------LMNQ 122
           + D      A++  + + G ID+LVNNA A++     +    ++            L +Q
Sbjct: 61  LSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQ 120

Query: 123 INARGTYLVKASQG 136
           I AR  ++VK  QG
Sbjct: 121 IAAR--HMVKQGQG 132

Length = 256

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 3/119 (2%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           + + +  AV +FG +D+++NNA   +   +    L+ ++ +   N  G +L S++ + Y 
Sbjct: 72  VVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYF 131

Query: 199 KKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            + +   +I+N+S      P W    V Y  SK G+ +    +A E+    I VN + P
Sbjct: 132 VEHDIKGNIINMSSVHEQIP-W-PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGP 188

Length = 261

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 14/96 (14%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKT----AEPHPKLPGTIYSAAKEVEDAGGN 66
              +TGA+R IG+AIAL  A  G ++ +        AE          + A E+   G  
Sbjct: 11  AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAE----------ALAAEIRALGRR 60

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
            +    D+ DE  V++ V  A    G I +LVNNAS
Sbjct: 61  AVALQADLADEAEVRALVARASAALGPITLLVNNAS 96

Length = 258

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 19/73 (26%), Positives = 38/73 (52%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           + +  V  A+  FGG+DIL+NNA     +   +T +     + ++N  G   +++  LP+
Sbjct: 67  DAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALPH 126

Query: 198 LKKSNHAHILNIS 210
           L + +   I+ +S
Sbjct: 127 LIERSQGSIVVVS 139

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 48/176 (27%)

Query: 141 SAVNAAVDKF-----GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCL 195
           +A +AA+  F     G +D+L NNA  +      + PL+ +D +  IN +G    +   L
Sbjct: 61  AAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAAL 120

Query: 196 PYLKKSNHAHILNIS--------PPLNLNPFWFKNHVAYTISKYGMSMCALGMAE----E 243
           PYLK +  A ++N S        P L            Y+ +K+ +     G+ E    E
Sbjct: 121 PYLKATPGARVINTSSASAIYGQPGL----------AVYSATKFAVR----GLTEALDLE 166

Query: 244 FKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRK-------PEIMADAA 289
           ++   I V  + P    TA       ML G S +  A S K       PE +A+A 
Sbjct: 167 WRRHGIRVADVMPLFVDTA-------MLDGTSNEVDAGSTKRLGVRLTPEDVAEAV 215

Length = 260

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++   ++  + K+G IDILVNNA   S          ++D +  +N  G +L+S+  +PY
Sbjct: 58  QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPY 117

Query: 198 LKKSNHAHILNISPPLNLNPFWF-KNHVAYTISKYGMSMCALGMAEEFKGD---NIAVNA 253
           + K +   I+NI+   ++  F   +N  AY  SK+ +    LG+      D    I   A
Sbjct: 118 MLKQDKGVIINIA---SVQSFAVTRNAAAYVTSKHAV----LGLTRSIAVDYAPTIRCVA 170

Query: 254 LWP---RTAIYTAAIEMLTGGSADAKATSRK 281
           + P   RT +   A E+  G   D +   RK
Sbjct: 171 VCPGSIRTPLLEWAAELEVG--KDPEHVERK 199

Length = 258

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 20/138 (14%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
            G L G    ITG   GIG+A+  +   +GA + +  ++AE               +   
Sbjct: 1   MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAE-----------KLASLRQR 49

Query: 64  GGNCLPCIV-DIRDEHAVQSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLKK-Y 117
            G+ +  +  D+      Q AV+  VD FG +D  V NA       SL D     L   +
Sbjct: 50  FGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAF 109

Query: 118 DLMNQINARGTYL--VKA 133
           D +  +N +G YL   KA
Sbjct: 110 DEIFNVNVKG-YLLGAKA 126

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 53.3 bits (128), Expect = 5e-08
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 6/145 (4%)

Query: 118 DLMNQINARGTYLVKASQGLEIQSAVNAAVDK----FGGIDILVNNASAISLTDTANTPL 173
            L +++ A G   +     +  +  V+AAV++     G +DILVNNA  + L    +   
Sbjct: 42  ALADELEAEGGKALVLELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADT 101

Query: 174 KKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGM 233
             +  M   N  G    +   LP+    N   I+NIS          +N   Y  +K+G+
Sbjct: 102 TDWTRMIDTNLLGLMYTTHAALPHHLLRNKGTIVNISSVAGRVA--VRNSAVYNATKFGV 159

Query: 234 SMCALGMAEEFKGDNIAVNALWPRT 258
           +  + G+ +E     + V  + P T
Sbjct: 160 NAFSEGLRQEVTERGVRVVVIEPGT 184

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 5e-08
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 3/134 (2%)

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 182
           I A G Y+   +    +Q+ V+    + G IDILVNNA  I          + +  +  I
Sbjct: 59  IEAHG-YVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDI 117

Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
           +    ++VS+  +P + K  H  I+NI     ++    +   AY  +K G+ M    +A 
Sbjct: 118 DLNAPFIVSKAVIPSMIKKGHGKIINICS--MMSELGRETVSAYAAAKGGLKMLTKNIAS 175

Query: 243 EFKGDNIAVNALWP 256
           E+   NI  N + P
Sbjct: 176 EYGEANIQCNGIGP 189

Length = 265

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 6e-08
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 11/123 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++Q AV+A V  FGG+D+L+ NA             +++ L+   N  G +   +  +P 
Sbjct: 68  DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA 127

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE----EFKGDNIAVNA 253
           LK+    +I+NIS     N   F    AY  SK+G+    +G +E    + +   I V+ 
Sbjct: 128 LKRGG-GYIINISSLAGTNF--FAGGAAYNASKFGL----VGFSEAAMLDLRQYGIKVST 180

Query: 254 LWP 256
           + P
Sbjct: 181 IMP 183

Length = 237

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 16/95 (16%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIA----AKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
           + ITGASRGIG A AL AA+ G  + +        AE          +  + +   GG  
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAE----------AVVQAIRRQGGEA 54

Query: 68  LPCIVDIRDEHAVQSAVNAAVDK-FGGIDILVNNA 101
           L    D+ DE  V   +  AVD+  G +D LVNNA
Sbjct: 55  LAVAADVADEADVL-RLFEAVDRELGRLDALVNNA 88

Length = 248

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 52.9 bits (127), Expect = 6e-08
 Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G   F+TGA  GIG+ IA+  A+ GA++ +            G +   A+ +E AG 
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFD-----LRTDDG-LAETAEHIEAAGR 58

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             +    D+  +  +++AV     + G + + VN A   +         +++  +  IN 
Sbjct: 59  RAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINL 118

Query: 126 RGTYL 130
            G +L
Sbjct: 119 TGVFL 123

Length = 254

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           +I +      ++ G +DILVNNA+A        +T L  +     +N RG + +S +   
Sbjct: 71  QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGK 130

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            +K+     I+N++    ++P  F+    Y+I+K  +       A+E     I VNAL P
Sbjct: 131 LMKEQGGGSIVNVASVNGVSPGDFQG--IYSITKAAVISMTKAFAKECAPFGIRVNALLP 188

Length = 252

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 17/133 (12%)

Query: 2   INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE 61
           +N    SG T+++TGA++GIG A+AL   + GA ++   +        P   +       
Sbjct: 1   MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATF------- 53

Query: 62  DAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 121
                    ++D+ D  AV       + + G +D+LVN A  + +  T +   + +    
Sbjct: 54  ---------VLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTF 104

Query: 122 QINARGT-YLVKA 133
            +NA G   L +A
Sbjct: 105 AVNAGGAFNLFRA 117

Length = 252

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 7e-08
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TG S GIG A      + GA++ I  +  E   +L        ++   A   
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEE---RLASAEARLREKFPGARLL 62

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTP 113
              C  D+ DE  V +   A   +FGG+D+LVNNA    ++  A+T 
Sbjct: 63  AARC--DVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTT 107

Length = 265

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 52.5 bits (126), Expect = 8e-08
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            +G    +TGA +GIG+A     AK GA +V  ++T          + S  +E       
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQA-------DLDSLVRECP----G 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
             P  VD+ D  A + A+ +     G +D+LVNNA+   L        + +D    +N R
Sbjct: 54  IEPVCVDLSDWDATEEALGSV----GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVR 109

Query: 127 GTYLV 131
               V
Sbjct: 110 AVIHV 114

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 52.5 bits (126), Expect = 8e-08
 Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 16/138 (11%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G T  +TG ++GIG AI  + A  GA +   A+  +        +     E  + G  
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQK-------ELDECLTEWREKGFK 56

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINA 125
               + D+      Q  ++     FGG ++ILVNNA      +  +   + Y L+   N 
Sbjct: 57  VEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNF 116

Query: 126 RGTY--------LVKASQ 135
              Y        L+KAS 
Sbjct: 117 EAAYHLSRLAHPLLKASG 134

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.4 bits (126), Expect = 9e-08
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 13/170 (7%)

Query: 148 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL 207
           ++FG +D+ VNNA++  L          +D    INA+     +Q+    ++K     I+
Sbjct: 78  EEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII 137

Query: 208 NISPPLNLNPF-WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAI- 265
           ++S   +L    + +N+    +SK  +      +A E     IAVNA+    A+ T A+ 
Sbjct: 138 SLS---SLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAV-SGGAVDTDALK 193

Query: 266 ------EMLTGGSADAKATSR-KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                 E+L    A   A    +PE +A+A  ++ S     + GQ +I D
Sbjct: 194 HFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVD 243

Length = 250

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 9e-08
 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 2/119 (1%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +  V  A+++FG IDILVNNA  I          + ++ +  IN    Y +SQ     
Sbjct: 77  SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKV 136

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + K     I+NI+  L+     F    AYT SK+G++      A E    NI VNA+ P
Sbjct: 137 MAKQGSGKIINIASMLSFQGGKFVP--AYTASKHGVAGLTKAFANELAAYNIQVNAIAP 193

Length = 258

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 9e-08
 Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 32/129 (24%)

Query: 11  TIFITGASRGIGKAIALKAAKDG-------ANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +IFITGA+ GIG+A AL  A +G        N    A  A                    
Sbjct: 3   SIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---------------- 46

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKF-----GGIDILVNNASAISLTDTANTPLKKYD 118
            GN     +D+ D  A      AA+  F     G +D+L NNA  +      + PL+ +D
Sbjct: 47  AGNAWTGALDVTDRAAWD----AALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHD 102

Query: 119 LMNQINARG 127
            +  IN +G
Sbjct: 103 RVIDINVKG 111

Length = 260

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 9e-08
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            SG    +TG + GIG+A AL  A++GA +V+A + A    +           + +AGG 
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEE-------TVALIREAGGE 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINA 125
            L    D+  +  V++ V   +  +G +D   NNA   I     A     ++D +  +N 
Sbjct: 58  ALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNV 117

Query: 126 RGTYL 130
           +G +L
Sbjct: 118 KGVWL 122

Length = 253

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 9/125 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G    ITG + G+G+ +A+  AK GA+IV       P  +          +VE  G  
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQ---------AQVEALGRK 56

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                 D+  +  + S V+ AV+  G IDIL+NNA  I   D      K +D +  IN +
Sbjct: 57  FHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQK 116

Query: 127 GTYLV 131
             + +
Sbjct: 117 TVFFL 121

Length = 251

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 9/122 (7%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCL-PY 197
           I S V+ AV+  G IDIL+NNA  I   D      K +D +  IN +  + +SQ     +
Sbjct: 70  IDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQF 129

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHV---AYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
           +K+ N   I+NI+  L+     F+  +   +YT SK  +      +A E    NI VNA+
Sbjct: 130 VKQGNGGKIINIASMLS-----FQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAI 184

Query: 255 WP 256
            P
Sbjct: 185 AP 186

Length = 251

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 50/251 (19%), Positives = 80/251 (31%), Gaps = 78/251 (31%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           ITG + GIG A A    K GA +                                  I+D
Sbjct: 5   ITGGASGIGLATAKLLLKKGAKVA---------------------------------ILD 31

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA 133
             +     + + A   K                         + D+ +            
Sbjct: 32  RNENPGAAAELQAINPK-------------------VKATFVQCDVTSWE---------- 62

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNA---SAISLTDTANTPLKKYDLMNQINARGTYLV 190
               ++ +A   A++KFG +DIL+NNA      S       P      ++ +N  G    
Sbjct: 63  ----QLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTID-VNLTGVINT 117

Query: 191 SQKCLPYLKKSNH---AHILNISPPLNLNPFWFKNHVAYTISKYGMS--MCALGMAEEFK 245
           +   L Y+ K+       I+NI     L P        Y+ SK+G+     +L    E+K
Sbjct: 118 TYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQF--PVYSASKHGVVGFTRSLADLLEYK 175

Query: 246 GDNIAVNALWP 256
              + VNA+ P
Sbjct: 176 -TGVRVNAICP 185

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 9/131 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           +++   L G    +TG   G+G+ +AL  A+ G +IV      EP   +        ++V
Sbjct: 2   ILDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIV-GINIVEPTETI--------EQV 52

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
              G   L    D+R    + + +  AV +FG IDILVNNA  I   D      K +D +
Sbjct: 53  TALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDV 112

Query: 121 NQINARGTYLV 131
             +N +  + +
Sbjct: 113 MNLNIKSVFFM 123

Length = 253

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 18/125 (14%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L      +TG S+GIGKA+  +  ++G+N VI     EP        Y+     +     
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSN-VINFDIKEPS-------YNDVDYFK----- 50

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                VD+ ++  V   ++  + K+G IDILVNNA   S          ++D +  +N  
Sbjct: 51  -----VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVN 105

Query: 127 GTYLV 131
           G +L+
Sbjct: 106 GIFLM 110

Length = 258

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 13/99 (13%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           T+ +TGA+RGIGKA        GA  V AA              SAA  V   G   +P 
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVR---------DPGSAAHLVAKYGDKVVPL 55

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDT 109
            +D+ D  ++++A   A D    +D+++NNA  +     
Sbjct: 56  RLDVTDPESIKAAAAQAKD----VDVVINNAGVLKPATL 90

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 62/305 (20%), Positives = 105/305 (34%), Gaps = 93/305 (30%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           T+ +TGA++GIG A++L+ A  G  ++  A++A      PG +++               
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVIGIARSAI--DDFPGELFA--------------- 47

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
             D+ D     + +    +    +D +VNN                              
Sbjct: 48  -CDLADIEQTAATLAQINEIH-PVDAIVNNVGI--------------------------- 78

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 190
                         A     G ID+        +L D        YDL    N R    V
Sbjct: 79  --------------ALPQPLGKIDL-------AALQDV-------YDL----NVRAAVQV 106

Query: 191 SQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
           +Q  L  +K      I+NI    +   F   +  +Y+ +K  +  C    A E     I 
Sbjct: 107 TQAFLEGMKLREQGRIVNIC---SRAIFGALDRTSYSAAKSALVGCTRTWALELAEYGIT 163

Query: 251 VNALWP---RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSL 300
           VNA+ P    T ++     +  G   + +  +         PE +A A  ++LS +   +
Sbjct: 164 VNAVAPGPIETELFRQTRPV--GSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFI 221

Query: 301 TGQFL 305
           TGQ L
Sbjct: 222 TGQVL 226

Length = 234

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 23/105 (21%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAK---EVED 62
            + G  + +TGA+RGIG+A   +    GA                  +Y+AA+    V D
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGA----------------AKVYAAARDPESVTD 46

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLT 107
            G   +P  +D+ D  +V +A  AA D    + ILVNNA      
Sbjct: 47  LGPRVVPLQLDVTDPASVAAAAEAASD----VTILVNNAGIFRTG 87

Length = 238

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 22/188 (11%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E+++ V   V++FG +D++V NA  +S   +     +++D +  IN  G +   +  +P+
Sbjct: 79  EVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINLTGVWRTCKAVVPH 138

Query: 198 L-KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + ++ N   I+  S    L       H  Y  +K+G+      +A E     I VN++ P
Sbjct: 139 MIERGNGGSIIITSSVAGLKALPGLAH--YAAAKHGLVGLTKTLANELAEYGIRVNSIHP 196

Query: 257 RTAIYTAAIEMLTGGSADAKATSRK----------------PEIMADAAYYILSSNPPSL 300
             ++ T  I        +A     +                PE +ADA  ++ S     +
Sbjct: 197 -YSVDTPMIA--PEAMREAFLKYPEAARAFMPALPVSGFVPPEDVADAVLWLASDESRYI 253

Query: 301 TGQFLIDD 308
           TG  L  D
Sbjct: 254 TGHQLPVD 261

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 18/121 (14%)

Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
           V A ++K G ID+LVNNA+  S    ++  L+++D +  +N  G Y +S+ C   L K+ 
Sbjct: 66  VYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCRDELIKNK 125

Query: 203 HAHILNI-------SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
              I+NI       S P         +  AY  SK G+      +A    G +I VN + 
Sbjct: 126 GR-IINIASTRAFQSEP---------DSEAYAASKGGLVALTHALAMSL-GPDIRVNCIS 174

Query: 256 P 256
           P
Sbjct: 175 P 175

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L+G    +TG ++GIGKAI +  A++GA +VI   +++   +      +   E+   G 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAE------NLVNELGKEGH 56

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +      D+         V  AV+ FG +DILVNNA
Sbjct: 57  DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNA 92

Length = 247

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 12/124 (9%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + +TGA+ G G+ I  +  + G  ++   +  E   +L           ++ G N     
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELK----------DELGDNLYIAQ 52

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINARG-TY 129
           +D+R+  A++  + +   ++  ID+LVNNA  A+ L       ++ ++ M   N +G  Y
Sbjct: 53  LDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVY 112

Query: 130 LVKA 133
           + +A
Sbjct: 113 MTRA 116

Length = 248

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 22/185 (11%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           Q+ +  A D  GG+ +LVNNA   S        L ++  +  IN    +L  +  LPYL+
Sbjct: 67  QALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLR 126

Query: 200 KSNHAHILNIS--PPLNLNPFWFKNHVAYTISKYGMSM----CALGMAEEFKGDNIAVNA 253
            S  A I+NIS        P    ++ AY  SK  ++      AL  A   +G ++  N+
Sbjct: 127 ASQPASIVNISSVAAFKAEP----DYTAYNASKAAVASLTKSIALDCAR--RGLDVRCNS 180

Query: 254 LWP---RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQ 303
           + P   RT I     + L    A  K           +P+ +A A  Y+ S     +TG 
Sbjct: 181 IHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA 240

Query: 304 FLIDD 308
            L+ D
Sbjct: 241 ELVID 245

Length = 251

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 5/125 (4%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            L G  + I G ++ +G  IA   A  GA  + I   +A        T+      V+ AG
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETV----AAVKAAG 60

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
              +    D+    AV+   + A   FG  DI +N    +           +YD M  +N
Sbjct: 61  AKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVN 120

Query: 125 ARGTY 129
           ++  +
Sbjct: 121 SKSAF 125

Length = 257

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 49.5 bits (118), Expect = 9e-07
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           +I++ ++  V++FG ID LVNNA       +  +T+    +  DL+N +N    +L S+ 
Sbjct: 73  DIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFR--DLLN-LNLISYFLASKY 129

Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            LP+L+KS   +I+N+S  +       K    Y  +K  ++     +A +     + VN 
Sbjct: 130 ALPHLRKS-QGNIINLSSLVGS--IGQKQAAPYVATKGAITAMTKALAVDESRYGVRVNC 186

Query: 254 LWPRTAIYTAAIEMLTGGSADAKATSRKPE 283
           + P   I+T   E L   + D  AT ++ E
Sbjct: 187 ISPGN-IWTPLWEELAAQTPDTLATIKEGE 215

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 49.7 bits (119), Expect = 9e-07
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 24/128 (18%)

Query: 13  FITGASRGIGKAIALKAAKDGANI---------VIAAKTAEPHPKL-PGTIYSAAKEVED 62
           FITGA+ G+G+AIA + A+ GA +          + A  AE +     G  ++A +    
Sbjct: 3   FITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQ---- 58

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
                     D+ DE   Q+ +  A D  GG+ +LVNNA   S        L ++  +  
Sbjct: 59  ----------DVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMA 108

Query: 123 INARGTYL 130
           IN    +L
Sbjct: 109 INVESIFL 116

Length = 251

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 11/166 (6%)

Query: 93  GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGG 152
           G  +++   S+    +     LK Y            +   S   ++++ V    ++ G 
Sbjct: 22  GAKVIITYRSSEEGAEEVVEELKAYG-----VKALGVVCDVSDREDVKAVVEEIEEELGP 76

Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
           IDILVNNA             + +D +   N  G + ++Q  L  + K     I+NIS  
Sbjct: 77  IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136

Query: 213 LNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + L  N         Y  SK G+      +A+E    NI VNA+ P
Sbjct: 137 VGLMGNA----GQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 46/192 (23%), Positives = 70/192 (36%), Gaps = 30/192 (15%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD------LMNQINARGT 187
           +   +I   V  A D FG +DILVNNA        A    + +       L++ I  R  
Sbjct: 60  TDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVI--RIV 117

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD 247
             V    LP +K+     I+NIS      P    N V   +++ G+      ++ E   D
Sbjct: 118 RAV----LPGMKERGWGRIVNISSLTVKEP--EPNLVLSNVARAGLIGLVKTLSRELAPD 171

Query: 248 NIAVNALWP------RTAIYTAAIEMLTGGSADAKATSR----------KPEIMADAAYY 291
            + VN++ P      R      A     G S +                KPE +A    +
Sbjct: 172 GVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAF 231

Query: 292 ILSSNPPSLTGQ 303
           + S     +TGQ
Sbjct: 232 LASEKASYITGQ 243

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 19/150 (12%)

Query: 117 YDLMNQINARGTYLVKASQGLE----IQSAVNAAVDKFGGIDILVNNASAISLTDTANTP 172
           ++++ +I A G      +  LE     Q  V AAV++FG +D+L+NN            P
Sbjct: 41  HEVLAEILAAGDAAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWA----KP 96

Query: 173 LKKYDLMNQINAR------GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAY 226
            + Y+   QI A        T    +  LP++ +     I+N+S             + Y
Sbjct: 97  YEHYE-EEQIEAEIRRSLFPTLWCCRAVLPHMLERQQGVIVNVSSIATRG----IYRIPY 151

Query: 227 TISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + +K G++     +A E   D I VNA+ P
Sbjct: 152 SAAKGGVNALTASLAFEHARDGIRVNAVAP 181

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 6/120 (5%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + ITG   G+G A A++ AK+GA + +     E        +   A + E      L   
Sbjct: 6   VLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAE-----VLLIK 60

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD-TANTPLKKYDLMNQINARGTYL 130
            D+ DE  V++ V+A V++FG ID   NNA      + T +    ++D +  IN RG + 
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 9/97 (9%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G TI ITGA   IG A+     + G  IVIAA   +             + +     +
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALN------ELLESLGKEFKS 54

Query: 67  CLPCIV--DIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
               +V  DI D+ +++  ++ + +K+G ID  VN A
Sbjct: 55  KKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC-LPCI 71
           F+TGA+ GIG+A AL+ A  GA + +  + A+        +     +    GG       
Sbjct: 4   FVTGAASGIGRATALRLAAQGAELFLTDRDADG-------LAQTVADARALGGTVPEHRA 56

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +DI D  AV +         G +D+++N A
Sbjct: 57  LDISDYDAVAAFAADIHAAHGSMDVVMNIA 86

Length = 272

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 18/126 (14%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAA-KTAEPHPKLP--GTIYSAAKEVEDAGGNCL 68
           + ITGASRGIG  +  +    G N VIA  +      +L   G  +S    +E       
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILE------- 53

Query: 69  PCIVDIRDE-HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN--QINA 125
              +D+ DE      AV   +    G+D+L+NNA  +     A+    + DL+   Q+N 
Sbjct: 54  ---LDVTDEIAESAEAVAERL-GDAGLDVLINNAGILHSYGPASEVDSE-DLLEVFQVNV 108

Query: 126 RGTYLV 131
            G  L+
Sbjct: 109 LGPLLL 114

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 142 AVNAAVDKF----GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            V AA++      G ID+L+NNA           P ++++ +  +N    +LVSQ    Y
Sbjct: 72  EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARY 131

Query: 198 LKKSNHAHILNI-SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + K     I+NI S    L          Y  SK  + M   GM  E    NI VN + P
Sbjct: 132 MVKRQAGKIINICSMQSELGR---DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAP 188

Length = 254

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 13/125 (10%)

Query: 138 EIQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E Q  ++     FGG ++ILVNNA      +  +   + Y L+   N    Y +S+   P
Sbjct: 69  ERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLSRLAHP 128

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL-----GMAEEFKGDNIAV 251
            LK S + +I+ IS    +        V    + YG +  AL      +A E+  DNI V
Sbjct: 129 LLKASGNGNIVFISSVAGV------IAVPSG-APYGATKGALNQLTRSLACEWAKDNIRV 181

Query: 252 NALWP 256
           NA+ P
Sbjct: 182 NAVAP 186

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 22/160 (13%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G  + +TG + G+G+AI  +   +GA + +  K+A    +L              G 
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE----------AAHGD 51

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLKK-YDLM 120
             +    D+R     + AV   V  FG ID L+ NA     + +L D  +  + + +D +
Sbjct: 52  AVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEV 111

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA 160
             IN +G YL      L +++A+ A V   G +   ++NA
Sbjct: 112 FHINVKG-YL------LAVKAALPALVASRGSVIFTISNA 144

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 17/124 (13%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGG 65
            +G  + + G SRGIG AI  +   DGAN+    A + +   +L     + A        
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA-------- 55

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                   ++ + A + AV   V K G +DILV NA      D         D + +IN 
Sbjct: 56  --------VQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINI 107

Query: 126 RGTY 129
              Y
Sbjct: 108 HAPY 111

Length = 237

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 3/122 (2%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK---LPGTIYSAAKE 59
               L G    + GA+RG G+ IA++    GA + +  ++          P TI   A+ 
Sbjct: 2   MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAEL 61

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           V  AGG  +   VD      V++ V     + G +DILVN+            P+ ++ L
Sbjct: 62  VTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSL 121

Query: 120 MN 121
             
Sbjct: 122 DK 123

Length = 305

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 48.8 bits (116), Expect = 2e-06
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +G+L      +TG   GIG+A A+  A++GA++ I+    E             K +E+ 
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDA-----QDVKKIIEEC 98

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDIL 97
           G   +    D+ DE   +S V+ A    GG+DI+
Sbjct: 99  GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIM 132

Length = 294

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 8   SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
               I ITGA+  IGKA        GA +++A          P       +         
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILA------DINAPALEQLKEELTNLYKNRV 54

Query: 68  LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +   +DI  + +++  + + ++KFG IDIL+NNA
Sbjct: 55  IALELDITSKESIKELIESYLEKFGRIDILINNA 88

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC--- 70
           +TGA++GIG A+A   A+ GA +    +  E             + V D      P    
Sbjct: 3   VTGAAQGIGYAVARALAEAGARVAAVDRNFEQL----------LELVADLRRYGYPFATY 52

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
            +D+ D  AV   V     ++G ID+LVN A  + L    +   + +     +N  G +
Sbjct: 53  KLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVF 111

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 16/100 (16%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           ITGASRGIG AIA +       +++  + AE              E+        P  VD
Sbjct: 8   ITGASRGIGAAIA-RELAPTHTLLLGGRPAE-----------RLDELAAELPGATPFPVD 55

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTP 113
           + D  A+     AAV++ G +D+LV+NA    L   A + 
Sbjct: 56  LTDPEAIA----AAVEQLGRLDVLVHNAGVADLGPVAEST 91

Length = 227

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 16/137 (11%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G    ITG   G+G+A+  +   +GA + +  ++AE            A+   D G 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAE----------KVAELRADFGD 50

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKK----YDLM 120
             +    D+R     + AV   V++FG +D  + NA      T   + P +K    +D +
Sbjct: 51  AVVGVEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDEL 110

Query: 121 NQINARGTYLVKASQGL 137
             IN +G Y++ A   L
Sbjct: 111 FHINVKG-YILGAKAAL 126

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 21/133 (15%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L    I +TGA  GIG+  AL  A+ GA +++  +T E   KL     +   E+E AGG 
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEE---KLE----AVYDEIEAAGGP 62

Query: 67  CLPCIV--DIR--DEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN- 121
             P I+  D+        Q   +   ++FG +D +++NA  +        P+++ D    
Sbjct: 63  -QPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLG----ELGPMEQQDPEVW 117

Query: 122 ----QINARGTYL 130
               Q+N   T++
Sbjct: 118 QDVMQVNVNATFM 130

Length = 247

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 48/202 (23%), Positives = 73/202 (36%), Gaps = 51/202 (25%)

Query: 138 EIQSAVNAAVDKFG-GIDILVNNASAISLTDTANTP----LKKYDLMNQINA--RGTYLV 190
           ++Q+    A + FG  I  +VNNA A    D         +   D   Q+    +G    
Sbjct: 66  QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT 125

Query: 191 SQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVA----YTISKYGMSMCALGMAEEFKG 246
            Q  LP +++     I+NI   L      F+N V     YT +K  +      +A E   
Sbjct: 126 IQAALPGMREQGFGRIINIGTNL------FQNPVVPYHDYTTAKAALLGLTRNLAAELGP 179

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGG---SADAKATSRK-----------------PEIMA 286
             I VN              M++GG   + DA A +                   P+  A
Sbjct: 180 YGITVN--------------MVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFA 225

Query: 287 DAAYYILSSNPPSLTGQFLIDD 308
           DA  +  S    ++TGQ L+ D
Sbjct: 226 DAVLFFASPWARAVTGQNLVVD 247

Length = 253

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 48.5 bits (116), Expect = 4e-06
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 14  ITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
           +TG + GIG+A+A   A+  GA +V+  ++  P  +           +E  G   L    
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEW--KAQTLAALEALGARVLYISA 267

Query: 73  DIRDEHAVQSAVNAAVDKFGGID 95
           D+ D  AV+  +    +++G ID
Sbjct: 268 DVTDAAAVRRLLEKVRERYGAID 290

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI-- 71
           +TGA RGIG AIA +   DG  ++    +              AK+  +  G     +  
Sbjct: 7   VTGAKRGIGSAIARELLNDGYRVIATYFSG----------NDCAKDWFEEYGFTEDQVRL 56

Query: 72  --VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             +D+ D      A+    ++ G +DILVNNA
Sbjct: 57  KELDVTDTEECAEALAEIEEEEGPVDILVNNA 88

Length = 245

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 76/306 (24%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L+     +T ++ GIG AIA + A+DGA++V++++  +   +   T+      V   G 
Sbjct: 7   PLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVT--GT 64

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
            C     + R+       V  AV+  GG+DILV+                          
Sbjct: 65  VCHVGKAEDRER-----LVATAVNLHGGVDILVS-------------------------- 93

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
                             NAAV+ F G           ++ D+     + +D +  +N +
Sbjct: 94  ------------------NAAVNPFFG-----------NILDSTE---EVWDKILDVNVK 121

Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
            T L+++  +P ++K     ++ +S     +P  F     Y +SK  +      +A E  
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHP--FPGLGPYNVSKTALLGLTKNLAPELA 179

Query: 246 GDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSR-----KPEIMADAAYYILSSNP 297
             NI VN L P   +T+ +++A+ M        K T R     +PE  A    ++ S + 
Sbjct: 180 PRNIRVNCLAPGLIKTS-FSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSEDA 238

Query: 298 PSLTGQ 303
             +TG+
Sbjct: 239 SYITGE 244

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 3/142 (2%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
           A+ AA+   G  D LVN A   SL    +   + +D +  +NARG  LV++     +  +
Sbjct: 67  AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA 126

Query: 202 NHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
                I+N+S    L      +H+AY  SK  +      +  E     I VN++ P   +
Sbjct: 127 GRGGSIVNVSSQAALVG--LPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTL 184

Query: 261 YTAAIEMLTGGSADAKATSRKP 282
              A E  +         +  P
Sbjct: 185 TPMAAEAWSDPQKSGPMLAAIP 206

Length = 245

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 13/91 (14%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           TI ITGA  G G+ +AL+ A+ G N++   + A         + +   E    G      
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQIA-------PQVTALRAEAARRGLALRVE 56

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            +D+ D      A  A  D    +D+L+NNA
Sbjct: 57  KLDLTDAIDRAQA--AEWD----VDVLLNNA 81

Length = 257

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA-NTPLKKYDLMNQINARGTYLVSQ 192
           S    I++A+    ++F  IDILVNNA      D A    L+ ++ M   N +G   V++
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119

Query: 193 KCLPYLKKSNHAHILNIS 210
             LP +   N  HI+N+ 
Sbjct: 120 LILPIMIARNQGHIINLG 137

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + +TGASRGIG+AIA + A DG  I +   +     +      S    ++  GGN     
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAE------SVVSAIQAQGGNARLLQ 54

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            D+ D  A ++ + A + + G    +V NA
Sbjct: 55  FDVADRVACRTLLEADIAEHGAYYGVVLNA 84

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 32/193 (16%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           ++   A +D++G  DILVNNA     +   N   K  D     + +     SQ+    ++
Sbjct: 72  ETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMR 131

Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL-----GMAEEFKGDNIAVNAL 254
           +     I+NI+    + P        Y +S YG    A+      +A E     I VNA+
Sbjct: 132 EG--GAIVNIASVAGIRPA-------YGLSIYGAMKAAVINLTKYLALELA-PKIRVNAI 181

Query: 255 WP---RTAIYTAAIEMLTGGSADAKATSR--------KPEIMADAAYYILSSNPPSLTGQ 303
            P   +T +  +  ++L  G ++ +   +         PE +A+    IL     S+TGQ
Sbjct: 182 APGFVKTKLGESLFKVL--GMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI--ESITGQ 237

Query: 304 FLIDD--EVLKAQ 314
             + D  E LK  
Sbjct: 238 VFVLDSGESLKGG 250

Length = 252

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 21/128 (16%)

Query: 140 QSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLKK-YDLMNQINARGTYLVSQKC 194
           Q AV+  VD FG +D  V NA       SL D     L   +D +  +N +G  L ++  
Sbjct: 68  QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAA 127

Query: 195 LPYLKKSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGMSMCALGM----AEEFKGDN 248
           LP LK S  + I  +S     N  ++       YT SK+      +G+    A E     
Sbjct: 128 LPALKASGGSMIFTLS-----NSSFYPGGGGPLYTASKHA----VVGLVRQLAYELAPK- 177

Query: 249 IAVNALWP 256
           I VN + P
Sbjct: 178 IRVNGVAP 185

Length = 263

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 46.7 bits (111), Expect = 8e-06
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 30/194 (15%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLMNQINARGTYL----VS 191
           ++  AV+  VDKFG +DI+VNNA  +     D  N  L +++ +  +N +G +L     +
Sbjct: 80  DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA 139

Query: 192 QKCLPYLKKSNHAHILNISPPL-NLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
           +  +P LKK +   + +++  +  L P       AYT SK+ +      +A E     I 
Sbjct: 140 RIMIP-LKKGSIVSLCSVASAIGGLGPH------AYTGSKHAVLGLTRSVAAELGKHGIR 192

Query: 251 VNALWP----------------RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILS 294
           VN + P                RT    A      G +A+ K      + +A+A  ++ S
Sbjct: 193 VNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLAS 252

Query: 295 SNPPSLTGQFLIDD 308
                ++G  L+ D
Sbjct: 253 DEARYISGLNLMID 266

Length = 280

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 29/164 (17%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           IFITGA+ GIG+  AL  A++G  + +     +           AA   E    N +   
Sbjct: 3   IFITGAASGIGRETALLFARNGWFVGLYDIDEDG---------LAALAAELGAENVVAGA 53

Query: 72  VDIRDEHAVQSAVNAAVDKF-----GGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
           +D+ D    ++A  AA+  F     G +D L NNA         + PL  +D M  IN +
Sbjct: 54  LDVTD----RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVK 109

Query: 127 GT---------YLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
           G          YL        I +A ++A+  +G  D+ V +A+
Sbjct: 110 GVLNGAYAALPYLKATPGARVINTASSSAI--YGQPDLAVYSAT 151

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 46.4 bits (110), Expect = 9e-06
 Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 188
           Y    S   +I S  +A   +  G+D+ +NNA         +   + +  M  +N     
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALS 120

Query: 189 LVSQKCLPYLKKSN--HAHILNIS-------PPLNLNPFWFKNHVAYTISKYGMSMCALG 239
           + +++    +K+ N    HI+NI+       PP+++  F       Y  +K+ ++    G
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHF-------YAATKHAVTALTEG 173

Query: 240 MAEE--FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------KPEIMADAAYY 291
           + +E      +I   ++ P   + T     L     +  A +       KPE +A+A  Y
Sbjct: 174 LRQELREAKTHIRATSISP-GLVETEFAFKLHDNDPEKAAATYESIPCLKPEDVANAVLY 232

Query: 292 ILSSNP 297
           +LS+ P
Sbjct: 233 VLSTPP 238

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 46.1 bits (110), Expect = 9e-06
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA---ISLTDTANTPLKKYDLMNQIN 183
            T ++       +++   A + ++  +DIL+NNA     I L D A+  L K D     N
Sbjct: 53  HTIVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASD-LDKADTEIDTN 111

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
             G   + +  LP+LKK   A I+N+S  L   P     +  Y  +K  +    L +  +
Sbjct: 112 LIGPIRLIKAFLPHLKKQPEATIVNVSSGLAFVP--MAANPVYCATKAALHSYTLALRHQ 169

Query: 244 FKGDNIAVNALWP 256
            K   + V  + P
Sbjct: 170 LKDTGVEVVEIVP 182

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           KL+G    +TG   GIG+  AL  AK GA +++     E       +  +  +E+ + GG
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQE-------SGQATVEEITNLGG 65

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             L    D+  +   Q  ++  ++ F  ID+L  NA
Sbjct: 66  EALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNA 101

Length = 169

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 2/114 (1%)

Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
             A  ++ G   IL+NNA+  + T       ++ D    +N R T L+S           
Sbjct: 86  FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA 145

Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
              I+N++   +L P    + +AY  +K  +      +A E     I VNA+ P
Sbjct: 146 GGRIINLTSGQSLGP--MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNP 197

Length = 256

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 21/128 (16%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKK----YDLMNQINARGTYLVSQKC 194
           + AV   V++FG +D  + NA      T   + P +K    +D +  IN +G  L ++  
Sbjct: 66  ERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGAKAA 125

Query: 195 LPYLKKSNHAHILNISPPLNLNPFWFKN--HVAYTISKYGMSMCALGM----AEEFKGDN 248
           LP L  +  + I  +S     N  ++       YT SK+      +G+    A E    +
Sbjct: 126 LPALYATEGSVIFTVS-----NAGFYPGGGGPLYTASKHA----VVGLVKQLAYEL-APH 175

Query: 249 IAVNALWP 256
           I VN + P
Sbjct: 176 IRVNGVAP 183

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 15/112 (13%)

Query: 109 TANTPLKKYDLMNQINARGTYLVKASQGLEIQS----------AVNAAVDKFGGIDILVN 158
           T   P K+ +L++Q            Q +++Q                + + G ID+LVN
Sbjct: 33  TMRNPEKQENLLSQATQLN-----LQQNIKVQQLDVTDQNSIHNFQLVLKEIGRIDLLVN 87

Query: 159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS 210
           NA   +       P+++Y    + N  G   V+Q  LPY++K     I+NIS
Sbjct: 88  NAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINIS 139

Length = 280

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 14/123 (11%)

Query: 140 QSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +  + AAV +FGGIDILVNNA  +  S  D          +M ++N  G    +   LP+
Sbjct: 66  ERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVM-RVNYLGAVYCTHAALPH 124

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE----EFKGDNIAVNA 253
           LK S    I+ +S    L          Y  SK+ +     G  +    E   D +AV  
Sbjct: 125 LKASRGQ-IVVVSSLAGLTG--VPTRSGYAASKHAL----HGFFDSLRIELADDGVAVTV 177

Query: 254 LWP 256
           + P
Sbjct: 178 VCP 180

Length = 263

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 28/206 (13%)

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDK----FGGIDILVNNASAISLTDTANTPLKKYD 177
           +IN  G   +  +  +  + AVNA +DK    FG +DILV+NA    +    N     + 
Sbjct: 50  EINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWK 109

Query: 178 LMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC 236
            M  I+  G +L ++  L ++ K      ++ +    +      K+  AY  +K+G+   
Sbjct: 110 KMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKS--AYVTAKHGLLGL 167

Query: 237 ALGMAEEFKGDNIAVNALWP---RTAIYTAAI----------------EMLTGGSADAKA 277
           A  +A+E    N+  + + P   RT +    I                +++ G + D   
Sbjct: 168 ARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVF 227

Query: 278 TSRKPEIMADAAYYILSSNPPSLTGQ 303
           T+   E +A    ++ S    +LTGQ
Sbjct: 228 TT--VEDVAQTVLFLSSFPSAALTGQ 251

Length = 262

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 37/139 (26%)

Query: 139 IQSAVNAAVDKFGGIDILVNNA-----SAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           I + V  A   FG ID+LVNNA      AI       +PL +     ++N  G   +++ 
Sbjct: 65  IDAVVADAEATFGPIDVLVNNAGYGHEGAIE-----ESPLAEMRRQFEVNVFGAVAMTKA 119

Query: 194 CLPYLKKSNHAHILNIS--------PPLNLNPFWFKNHVAYTISKY---GMSMCALGMAE 242
            LP ++     HI+NI+        P +            Y  SK+   G+S     +A+
Sbjct: 120 VLPGMRARRRGHIVNITSMGGLITMPGIG----------YYCGSKFALEGISE---SLAK 166

Query: 243 EFKGDNIAVNALWP---RT 258
           E     I V A+ P   RT
Sbjct: 167 EVAPFGIHVTAVEPGSFRT 185

Length = 277

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 20/149 (13%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAI---SLTDTANTPLKKYDLMNQINARGTYLVSQKC 194
            I+ AV   V +FG +DILVN A       L  +    L   D    +N     +++Q  
Sbjct: 66  AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALD----VNLVSAAMLAQAA 121

Query: 195 LPYLKKSNHAHILN---ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
            P+L       I+N   IS        W      Y  SK  +      MA +   D I V
Sbjct: 122 HPHL-ARGGGAIVNFTSISAKFAQTGRWL-----YPASKAAIRQLTRSMAMDLAPDGIRV 175

Query: 252 NALWPRTAIYTAAIEMLTGGS---ADAKA 277
           N++ P    ++  ++ L+GG    AD  A
Sbjct: 176 NSVSP-GWTWSRVMDELSGGDRAKADRVA 203

Length = 261

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 28/218 (12%)

Query: 106 LTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL 165
            TD     LK+ +    I  R   +    Q       V A   + G ID+L N A  +  
Sbjct: 31  ATDINEEKLKELERGPGITTRVLDVTDKEQ-------VAALAKEEGRIDVLFNCAGFVHH 83

Query: 166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK---N 222
               +     +D    +N R  YL+ +  LP +       I+N+S   +      K   N
Sbjct: 84  GSILDCEDDDWDFAMNLNVRSMYLMIKAVLPKMLARKDGSIINMSSVASS----IKGVPN 139

Query: 223 HVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-- 280
              Y+ +K  +      +A +F    I  NA+ P T + T ++E       D +   +  
Sbjct: 140 RFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPGT-VDTPSLEERIQAQPDPEEALKAF 198

Query: 281 ----------KPEIMADAAYYILSSNPPSLTG-QFLID 307
                      PE +A  A Y+ S     +TG   +ID
Sbjct: 199 AARQPLGRLATPEEVAALAVYLASDESAYVTGTAVVID 236

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TGAS G G    L+ AK G  ++   +    +P+    + S A ++ +   N     +
Sbjct: 7   IVTGASSGFGLLTTLELAKKGYLVIATMR----NPEKQENLLSQATQL-NLQQNIKVQQL 61

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           D+ D++++ +     + + G ID+LVNNA
Sbjct: 62  DVTDQNSIHN-FQLVLKEIGRIDLLVNNA 89

Length = 280

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 16/106 (15%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + ITG S+G+G+AIA +  + G +++  ++T               K  E    N     
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTENK---------ELTKLAEQYNSNLTFHS 54

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN--TPLK 115
           +D++D H +++  N  +       I  +N S+I L + A    P+K
Sbjct: 55  LDLQDVHELETNFNEILSS-----IQEDNVSSIHLINNAGMVAPIK 95

Length = 251

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 16/93 (17%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
           +TG SRGIG+A AL  A++G  + +        A+               +  AGG    
Sbjct: 6   VTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQ----------EVVNLITQAGGKAFV 55

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNA 101
              DI DE+ V  A+  A+D+    +  LVNNA
Sbjct: 56  LQADISDENQVV-AMFTAIDQHDEPLAALVNNA 87

Length = 247

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 6   KLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAE----PHPKLPGTIYSAAKE 59
           +L      +TG SR  GIG AI  + A+ GA+I     TA     P            +E
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           +   G       +D+    A +  +N   ++ G   ILVNNA+  +  D +N   ++ D 
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDK 122

Query: 120 MNQINARGTYLVKA 133
              +N R T L+ +
Sbjct: 123 HYMVNVRATTLLSS 136

Length = 256

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 45/251 (17%), Positives = 81/251 (32%), Gaps = 70/251 (27%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           K +G TI ITG + GIG A+A +  + G  ++I  +  E              E +    
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEE-----------RLAEAKAENP 50

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                + D+ D  + +  V     ++  +++L+NNA                        
Sbjct: 51  EIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAG----------------------- 87

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
                        IQ   +       G + L++                        N  
Sbjct: 88  -------------IQRNED-----LTGAEDLLD-----DAEQEI-----------ATNLL 113

Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
               ++   LP+L +   A I+N+S  L   P    +   Y  +K  +    L + E+ K
Sbjct: 114 APIRLTALLLPHLLRQPEATIINVSSGLAFVP--MASTPVYCATKAAIHSYTLALREQLK 171

Query: 246 GDNIAVNALWP 256
             ++ V  L P
Sbjct: 172 DTSVEVIELAP 182

Length = 245

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           + GAS GIG A A++ A  G  + + A+  E   +L   I +        GG  +   +D
Sbjct: 15  VAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-------GGEAVAFPLD 67

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           + D  +V+S V  A +  G I++LV+ A
Sbjct: 68  VTDPDSVKSFVAQAEEALGEIEVLVSGA 95

Length = 274

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 187
            Y    S+  E+  A      + G + IL+NNA  +S       P ++ +   ++N    
Sbjct: 52  YYKCDVSKREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAH 111

Query: 188 YLVSQKCLPYLKKSNHAHILNIS------PPLNLNPFWFKNHVAYTISKYGMSMCALGMA 241
           +  ++  LP + + NH HI+ I+       P  L          Y  SK         + 
Sbjct: 112 FWTTKAFLPDMLERNHGHIVTIASVAGLISPAGL--------ADYCASKAAAVGFHESLR 163

Query: 242 EEFK 245
            E K
Sbjct: 164 LELK 167

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +++A     D+FG ID+LV+ A+       A      +  +  I+  GT+ V +   P L
Sbjct: 73  VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLL 132

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           ++   A I+ IS P    P   + HV    +K G+ M    +A E+  + I VN++ P
Sbjct: 133 RRPG-ASIIQISAPQAFVPMPMQAHVC--AAKAGVDMLTRTLALEWGPEGIRVNSIVP 187

Length = 264

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
           A++  + + G ID+LVNNA A++     +    ++  +  ++  G +L SQ    ++ K 
Sbjct: 70  ALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ 129

Query: 202 NH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
                I+NI+      P       AYT +K+ +      MA E     I VNA+ P  AI
Sbjct: 130 GQGGRIINITSVHEHTP--LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAP-GAI 186

Query: 261 YTAAIEMLTGGSADAKATSRKPEI 284
            T    M     +D K  SR P I
Sbjct: 187 ATPMNGM---DDSDVKPDSR-PGI 206

Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 8/175 (4%)

Query: 97  LVNNASAISLTDTANTPLK--KYDLMNQINARGTYLVKA--SQGLEIQSAVNAAVDKFGG 152
           L    + +SL D     L+  K  L+         L+KA  S   ++++ V+A V++FG 
Sbjct: 23  LAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDEAQVEAYVDATVEQFGR 82

Query: 153 IDILVNNASAISLTD-TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISP 211
           ID   NNA      + T +    ++D +  IN RG +   +K L  +++     I+N + 
Sbjct: 83  IDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVLKVMREQGSGMIVNTAS 142

Query: 212 PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIE 266
              +      N   Y  +K+G+       A E+    I +NA+ P  AI T  +E
Sbjct: 143 VGGIRG--VGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAP-GAILTPMVE 194

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 9/93 (9%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE--DAGGNCL 68
           T  +TG   GIGK +A      GA ++I  +  +   KL      AA+E+E     G   
Sbjct: 9   TYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPD---KLAA----AAEEIEALKGAGAVR 61

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
               D+ DE  V  AV+AA    G +  +V+ A
Sbjct: 62  YEPADVTDEDQVARAVDAATAWHGRLHGVVHCA 94

Length = 276

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 7/124 (5%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLP 196
           + +  V +     G +D L+  A   +     + + +K +DLM + N   +++ S     
Sbjct: 54  QAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATK 113

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG--DNIAVNAL 254
           +L       ++       L P      + Y  +K  +      +A E  G       NA+
Sbjct: 114 HLLSG--GLLVLTGAKAALEP--TPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAI 169

Query: 255 WPRT 258
            P T
Sbjct: 170 LPVT 173

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 10  LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
           + + +T +SRGIG  +A +  K GA +VI+++  E        +  A KE+++ G     
Sbjct: 1   MNVLVTASSRGIGFNVARELLKKGARVVISSRNEE-------NLEKALKELKEYGE-VYA 52

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS 105
              D+ D+  +++ V  A +  GGID LV NA  + 
Sbjct: 53  VKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVR 88

Length = 259

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 44/204 (21%), Positives = 73/204 (35%), Gaps = 53/204 (25%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASA-----------ISLTDTANTPLKKYDLMNQINARG 186
            ++  ++ + +K+G ID  VN A             +SL D         +L   +    
Sbjct: 69  SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDF------NENLSLHLG--S 120

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH--------VAYTISKYGMSMCAL 238
           ++L SQ+   Y KK    +++NIS    +    F+ +        V Y   K G+     
Sbjct: 121 SFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTK 180

Query: 239 GMAEEFKGDNIAVNALWP-------------RTAIYTAAIEMLTGGSADAKATSRKPEIM 285
            +A+ FK  NI VN + P                       ML             P+ +
Sbjct: 181 YLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGML------------DPDDI 228

Query: 286 ADAAYYILSSNPPSLTGQFLI-DD 308
                ++LS     +TGQ +I DD
Sbjct: 229 CGTLVFLLSDQSKYITGQNIIVDD 252

Length = 256

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 9/109 (8%)

Query: 141 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI--NARGTYLVSQKCLPYL 198
           +AV  AV+ FG +DI+VNNA                +   QI  N  G   V+Q  LPYL
Sbjct: 66  AAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTES--EARAQIDTNFFGALWVTQAVLPYL 123

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKY---GMSMCALGMAEEF 244
           ++    HI+ IS    ++   F     Y  SK+   GMS        EF
Sbjct: 124 REQRSGHIIQISSIGGISA--FPMSGIYHASKWALEGMSEALAQEVAEF 170

Length = 275

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 43.2 bits (102), Expect = 9e-05
 Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 20/186 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTP----LKKYDLMNQINA--RGTYLVS 191
           ++Q+ +  A + FG +D +VNNA      D         +   D   Q+    +G   + 
Sbjct: 61  QVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNLL 120

Query: 192 QKCLPYLKKSNHAHILNISPPLNLNP-FWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
           Q  LP  K+     ++NI   L  NP   + +   YT +K  +      MA+E     I 
Sbjct: 121 QAVLPDFKERGSGRVINIGTNLFQNPVVPYHD---YTTAKAALLGFTRNMAKELGPYGIT 177

Query: 251 VNALWP------RTAIYT--AAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTG 302
           VN +          +  T     + +   +   K T+  P+ +ADA  +  S    ++TG
Sbjct: 178 VNMVSGGLLKVTDASAATPKEVFDAIAQTTPLGKVTT--PQDIADAVLFFASPWARAVTG 235

Query: 303 QFLIDD 308
           Q L+ D
Sbjct: 236 QNLVVD 241

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 6/121 (4%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            +++ V     +FG +DILVNNA             + +D +  +N  G + V+Q  +  
Sbjct: 63  AVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVIRA 122

Query: 198 LKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
           + K     I+NIS  + L  NP        Y  SK G+      +A+E     I VNA+ 
Sbjct: 123 MIKRRSGRIINISSVVGLIGNP----GQANYAASKAGVIGFTKSLAKELASRGITVNAVA 178

Query: 256 P 256
           P
Sbjct: 179 P 179

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 24/125 (19%)

Query: 148 DKFGGIDILVNNASAISLTDTANTPLKKYDLMN-----QINARGTYLVSQKCLPYLKKSN 202
           ++FG +D +++NA  +        P+++ D        Q+N   T++++Q  LP L KS 
Sbjct: 88  EQFGRLDGVLHNAGLLG----ELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP 143

Query: 203 HAHILNISPPLNLNP--FWFKNHVAYTISKY---GMSMCALGMAEEFKGDNIAVNALWP- 256
            A ++  S  +       W     AY +SK+   GM M  L  A+E++G N+ VN + P 
Sbjct: 144 AASLVFTSSSVGRQGRANW----GAYAVSKFATEGM-MQVL--ADEYQGTNLRVNCINPG 196

Query: 257 --RTA 259
             RTA
Sbjct: 197 GTRTA 201

Length = 247

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 13/111 (11%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           G    +TGA+RGIG  IA     +G  +V+A    E            +K  +  G N  
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRE----------RGSKVAKALGENAW 59

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
              +D+ DE  V + V   + +FG +D LV NA   ++ D  NT L+   L
Sbjct: 60  FIAMDVADEAQVAAGVAEVLGQFGRLDALVCNA---AIADPHNTTLESLSL 107

Length = 255

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 19/98 (19%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKE---VEDAGGNC 67
            + ITG S GIG  +A++ A D               K+  T+    K+    E AG   
Sbjct: 2   VVLITGCSSGIGLHLAVRLASD----------PSKRFKVYATMRDLKKKGRLWEAAGALA 51

Query: 68  LPCI----VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              +    +D+ D  +V +AV    +    +D+LV NA
Sbjct: 52  GGTLETLQLDVCDSKSVAAAVERVTE--RHVDVLVCNA 87

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 13/91 (14%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + ITG S GIG+A+A      G  +   A+ AE    L    ++A +            
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQ------------ 50

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            +D+ D  A+         + GG+D+L+NNA
Sbjct: 51  -LDVNDGAALARLAEELEAEHGGLDVLINNA 80

Length = 274

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 11  TIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
           T  ITG   G+G+A+A   A+ GA  +V+ +++    P       +   E+E AG     
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAA----ALLAELEAAGARVTV 57

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              D+ D  A+ + + A     G +  +++ A
Sbjct: 58  VACDVADRDALAAVLAAIPAVEGPLTGVIHAA 89

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 28/190 (14%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           EI++ V AAV ++G ID+LVNNA       TA    + +  + + N  G + V+++ L  
Sbjct: 66  EIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVLKA 125

Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA----YTISKYGMSMCALGMAEEFKGDNIAV 251
             + +     I+NI+          K  V     Y+ SK+G+      +  E     I V
Sbjct: 126 GGMLERGTGRIINIASTGG------KQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 179

Query: 252 NALWP---------RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSS 295
           NA+ P             + A I  ++   A  + T+R        PE +A    Y++  
Sbjct: 180 NAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGD 239

Query: 296 NPPSLTGQFL 305
              ++T Q L
Sbjct: 240 GAAAVTAQAL 249

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 21/99 (21%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL--------PGTIYSAAKEVED 62
            I ITGAS G+G  +A + A  G ++ + A+  +   +L        PG I  A      
Sbjct: 4   KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPG-IKVAVAA--- 59

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                    +D+ D   V        D+ GG+D ++ NA
Sbjct: 60  ---------LDVNDHDQVFEVFAEFRDELGGLDRVIVNA 89

Length = 248

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 6/119 (5%)

Query: 150 FGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILN 208
           +  +D +++NA  +  +   +    + +  + Q+N   T++++Q  LP L KS+   ++ 
Sbjct: 82  YPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQALLPLLLKSDAGSLVF 141

Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTAA 264
            S  +        N  AY +SK+        +A+E++  N+ VN + P   RTA+  +A
Sbjct: 142 TSSSVGRQG--RANWGAYAVSKFATEGLXQVLADEYQQRNLRVNCINPGGTRTAMRASA 198

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 14/90 (15%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + +TGA++GIG+A+A    + GA  VIA           G                    
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGAT-VIALDLPFVLLLEYGDPLRLTP------------- 46

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +D+ D  AV+   +  + + G ID LVN A
Sbjct: 47  LDVADAAAVREVCSRLLAEHGPIDALVNCA 76

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN-- 66
           G +  ITGA+ GIGKA AL  AK G  + +  +      +       A KE+E   GN  
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEE-------ARKEIETESGNQN 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
               IVD+ D   V   V    ++   + +L+NNA
Sbjct: 54  IFLHIVDMSDPKQVWEFVEEFKEEGKKLHVLINNA 88

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 145 AAVDKF-----GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           AA+  F     G +D L NNA         + PL  +D M  IN +G    +   LPYLK
Sbjct: 64  AALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYLK 123

Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP--- 256
            +  A ++N +    +  +   +   Y+ +K+ +      +  E+    I V  +WP   
Sbjct: 124 ATPGARVINTASSSAI--YGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFV 181

Query: 257 RTAIYTAA 264
            T I T  
Sbjct: 182 DTPILTKG 189

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 20/106 (18%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG- 65
           L+   I +TGAS GIG+  AL  A+ GA +++  +  E        +   A  + + GG 
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEE-------KLRQVADHINEEGGR 54

Query: 66  -------NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
                  + L C  +   + A + AVN     +  +D +++NA  +
Sbjct: 55  QPQWFILDLLTCTSENCQQLAQRIAVN-----YPRLDGVLHNAGLL 95

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 29/50 (58%)

Query: 7  LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA 56
          LS  TI +TGAS+G+G+ +A   A  GA +++ A+  +   K+   I  A
Sbjct: 4  LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA 53

Length = 239

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 17/134 (12%)

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY-- 188
            KA    + +  V+A +   G ID+LV+N       D    P+   D  ++ + R  +  
Sbjct: 51  TKALSEQKPEELVDAVLQAGGAIDVLVSN-------DYIPRPMNPIDGTSEADIRQAFEA 103

Query: 189 ------LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
                  + Q  +  +KK+    I+ I+  +   P     +  Y  ++      A  +A+
Sbjct: 104 LSIFPFALLQAAIAQMKKAGGGSIIFITSAVPKKPL--AYNSLYGPARAAAVALAESLAK 161

Query: 243 EFKGDNIAVNALWP 256
           E   DNI V A+ P
Sbjct: 162 ELSRDNILVYAIGP 175

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 15/33 (45%), Positives = 23/33 (69%)

Query: 4  TGKLSGLTIFITGASRGIGKAIALKAAKDGANI 36
          + ++ G T+ I+G +RGIGKAI  + A+ G NI
Sbjct: 3  SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNI 35

Length = 260

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 9/95 (9%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV--EDAGGN 66
           G T+ ITGA+ GIGK  A + A+ GA +++A +              AA E+  +     
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDM-------AKCEEAAAEIRRDTLNHE 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            +   +D+    ++++     + +   +D+L+NNA
Sbjct: 54  VIVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNA 88

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 118 DLMNQINARG--TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
           +L+N++   G   Y V+A  S+  +    V  AV+ FG +DILVNNA             
Sbjct: 46  NLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNR 105

Query: 174 KKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGM 233
           + ++ +  +N    +  +   LPY+ ++    I++IS  +     + + +  Y+ +K GM
Sbjct: 106 EDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTN--YSAAKAGM 163

Query: 234 SMCALGMAEEFKGDNIAVNALWP 256
                 +A E    N+ VNA+ P
Sbjct: 164 LGFTKSLALELAKTNVTVNAICP 186

Length = 247

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 27/191 (14%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           SQ  ++ S ++    + GGIDI V NA  I++T   + PL+++  +   N  G +L +Q 
Sbjct: 68  SQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQA 127

Query: 194 CLPYLKK-----------SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
               + K           S   HI+N+   ++           Y  SK  +      MA 
Sbjct: 128 AAKAMVKQGQGGVIINTASMSGHIINVPQQVS----------HYCASKAAVIHLTKAMAV 177

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAK-----ATSRKPEIMADAAYYILSSNP 297
           E     I VN++ P   I T  +E  T      +         +PE +A    Y+ S   
Sbjct: 178 ELAPHKIRVNSVSP-GYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEAS 236

Query: 298 PSLTGQFLIDD 308
             +TG  ++ D
Sbjct: 237 SYMTGSDIVID 247

Length = 253

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 43/160 (26%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           + G S GIG A+A   A +GA + IA+++ +   +L     +AA      G       +D
Sbjct: 2   VVGGSSGIGLALARAFAAEGARVTIASRSRD---RL-----AAAARALGGGAPVRTAALD 53

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL------MN------ 121
           I DE AV +    A    G  D +V     I+  DT   P++   L      M+      
Sbjct: 54  ITDEAAVDAFFAEA----GPFDHVV-----ITAADTPGGPVRALPLAAAQAAMDSKFWGA 104

Query: 122 -------QINARG--TYL-----VKASQGLEIQSAVNAAV 147
                  +I   G  T++     V+ S    +Q A+NAA+
Sbjct: 105 YRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAAL 144

Length = 230

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 19/127 (14%)

Query: 140 QSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLKK-YDLMNQINARGTYLVSQKC 194
           + AV   V  FG ID L+ NA     + +L D  +  + + +D +  IN +G  L  +  
Sbjct: 67  KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAA 126

Query: 195 LPYLKKSNHAHILNISPPLNLNPFWFKN--HVAYTISKYGMSMCALGMAEEFK---GDNI 249
           LP L  S  + I  IS     N  ++ N     YT +K+ +    +G+ +E        +
Sbjct: 127 LPALVASRGSVIFTIS-----NAGFYPNGGGPLYTAAKHAV----VGLVKELAFELAPYV 177

Query: 250 AVNALWP 256
            VN + P
Sbjct: 178 RVNGVAP 184

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 40.3 bits (95), Expect = 9e-04
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            I++AV+  + + G ID+LVNNA   S     + P+ +     ++N  G   ++Q  LP+
Sbjct: 60  SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPH 119

Query: 198 LKKSNHAHILNIS 210
           ++      I+NIS
Sbjct: 120 MRAQRSGRIINIS 132

Length = 273

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 17/176 (9%)

Query: 140 QSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +  V   V +FG +DILVNNA+         +   ++ +   + N    + +++  LP+L
Sbjct: 93  RDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHL 152

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
           KK   + I+N +           + + Y  +K  +     G++ +     I VNA+ P  
Sbjct: 153 KKG--SSIINTTSVTAYKG--SPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAP-G 207

Query: 259 AIYTAAIEMLTGGSADAKATSRK---------PEIMADAAYYILSSNPPSLTGQFL 305
            I+T  I   +    +  +             P  +A A  ++ S +   +TGQ L
Sbjct: 208 PIWTPLIP--SSFPEEKVSEFGSQVPMGRAGQPAEVAPAYVFLASQDSSYVTGQVL 261

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 17/124 (13%)

Query: 140 QSAVNAAVDKFGGIDILVNN-ASAISLTDTANTPLKKYDLMNQINA--RGTYLVSQKC-- 194
           Q+A+ AAV+ FG ID+L+NN    I        P ++Y+   QI A  R +   +  C  
Sbjct: 72  QAAMAAAVEAFGRIDVLINNVGGTIWA-----KPFEEYE-EEQIEAEIRRSLFPTLWCCR 125

Query: 195 --LPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
             LP++       I+N+S           N V Y+ +K G++     +A E+    I VN
Sbjct: 126 AVLPHMLAQGGGAIVNVSS----IATRGINRVPYSAAKGGVNALTASLAFEYAEHGIRVN 181

Query: 253 ALWP 256
           A+ P
Sbjct: 182 AVAP 185

Length = 260

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 2/117 (1%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           Q  +     + GG+D+++ NA     T   +   K +      N  G   + +  LP  +
Sbjct: 63  QLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALPQFR 122

Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
                H++ IS    L         AY+ SK  +S  A  +  + K   I V  + P
Sbjct: 123 AKGRGHLVLISSVAAL--RGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINP 177

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 3/116 (2%)

Query: 141 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK 200
            AV   V K G +DILV NA      D         D + +IN    Y  S +    +  
Sbjct: 64  DAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMP- 122

Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
                I+ I   +N +        AY  SK  +   A G+A +F    I +N + P
Sbjct: 123 -EGGRIIIIGS-VNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQP 176

Length = 237

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP- 69
           T FITGAS G G+ +  +    G  +  AA    P          A  +++   G+ L  
Sbjct: 4   TWFITGASSGFGRGMTERLLARGDRV--AATVRRP---------DALDDLKARYGDRLWV 52

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             +D+ D  AV++ V+ A    G ID++V+NA
Sbjct: 53  LQLDVTDSAAVRAVVDRAFAALGRIDVVVSNA 84

Length = 276

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 14/121 (11%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            I ITGA + IG A+A      G  ++++ +T   +P +          +  AG  C+  
Sbjct: 4   PILITGAGQRIGLALAWHLLAQGQPVIVSYRT--HYPAI--------DGLRQAGAQCIQA 53

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-YDLMNQINARGTY 129
             D      + + ++       G+  +++NAS   L +    PL      M QI+    Y
Sbjct: 54  --DFSTNAGIMAFIDELKQHTDGLRAIIHNASDW-LAEKPGAPLADVLARMMQIHVNAPY 110

Query: 130 L 130
           L
Sbjct: 111 L 111

Length = 236

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 11 TIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
          T  +TG   G+G  +A   A+ GA ++V+ +++  P P+    +     E+E  G     
Sbjct: 2  TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL----AELEARGAEVTV 57

Query: 70 CIVDIRDEHAVQSAVNAAVDKFGGID 95
             D+ D  AV++ +         + 
Sbjct: 58 VACDVSDRDAVRALLAEIRADGPPLR 83

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 17/190 (8%)

Query: 140 QSAVNAAVDKFGGIDILVNN---ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
                 AV+ FG +DI+VNN        L  T+   L      N   A    + +   + 
Sbjct: 75  AGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLM- 133

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            L+ S    ++NIS  +       +   AY  +K  ++      A +     I VNA+ P
Sbjct: 134 -LEHSGGGSVINISSTMGRLA--GRGFAAYGTAKAALAHYTRLAALDL-CPRIRVNAIAP 189

Query: 257 RTAIYTAAIEMLTGG----SADAKATSRK----PEIMADAAYYILSSNPPSLTGQFLIDD 308
             +I T+A+E++       +   KAT  +    PE +A AA Y+ S     LTG+ L  D
Sbjct: 190 -GSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVD 248

Query: 309 EVLKAQHIDL 318
             L   ++DL
Sbjct: 249 GGLTFPNLDL 258

Length = 263

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 35/190 (18%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN-----QINARGTYLVSQ 192
           ++ + V   + +FG +D LV NA+   + D  NT L+   L +      +N  G  L+++
Sbjct: 70  QVAAGVAEVLGQFGRLDALVCNAA---IADPHNTTLESLSLAHWNRVLAVNLTGPMLLAK 126

Query: 193 KCLPYLKKSNHAHILNI-------SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
            C PYL+  N A I+N+       S P         +  AY  SK G+      +A    
Sbjct: 127 HCAPYLRAHNGA-IVNLASTRARQSEP---------DTEAYAASKGGLLALTHALAISL- 175

Query: 246 GDNIAVNALWP-----RTAIYTAAIEMLTGGSADAKATSR--KPEIMADAAYYILSSNPP 298
           G  I VNA+ P     R      A E L+          R    E +A    ++LS    
Sbjct: 176 GPEIRVNAVSPGWIDARDPSQRRA-EPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAG 234

Query: 299 SLTGQ-FLID 307
            +TGQ F++D
Sbjct: 235 FVTGQEFVVD 244

Length = 255

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 156 LVNNASAISL-TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN 214
           LVNNA  +    D    P+  Y    ++N  GT  V++  LP L+++    ++N+S    
Sbjct: 82  LVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKAFLPLLRRA-KGRVVNVSSMGG 140

Query: 215 LNPFWFKNHVAYTISKYGMSM 235
             PF      AY  SK  +  
Sbjct: 141 RVPFPAGG--AYCASKAAVEA 159

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG    +TGAS GIG+ IA      GA + +     E    L   +    K        
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVK-------- 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             P  +  RDE  V++    A     G+DILVNNA
Sbjct: 56  IFPANLSDRDE--VKALGQKAEADLEGVDILVNNA 88

Length = 245

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 33/189 (17%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           ++ V  AV++FGG+DI  NNA  +  +   A   L+ +      N    +L ++  +P +
Sbjct: 71  KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAM 130

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHV-------AYTISKYGMSMCALGMAEEFKGDNIAV 251
                  ++  S         F  H        AY  SK G+      +A E+    I V
Sbjct: 131 LARGGGSLIFTST--------FVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRV 182

Query: 252 NALWP---RTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILSSNPPS 299
           NAL P    T +  A      G + +A A            +PE +A AA ++ S     
Sbjct: 183 NALLPGGTDTPMGRAM-----GDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASF 237

Query: 300 LTGQFLIDD 308
           +TG  L+ D
Sbjct: 238 VTGTALLVD 246

Length = 254

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TG   GIG AI  + AKDG  +      A   P        A   +++ G       V
Sbjct: 4   LVTGGMGGIGTAICQRLAKDGYRVA-----ANCGPNEE----RAEAWLQEQGALGFDFRV 54

Query: 73  ---DIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              D+    + ++AV     + G ID+LVNNA
Sbjct: 55  VEGDVSSFESCKAAVAKVEAELGPIDVLVNNA 86

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 15/123 (12%)

Query: 140 QSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLKKYDLMNQINARGTYLVSQKCL 195
           + AV   V + G +DILVNNA+      SL D      ++ D   + N    + +++  L
Sbjct: 112 KDAVEETVRELGRLDILVNNAAFQYPQQSLEDITA---EQLDKTFKTNIYSYFHMTKAAL 168

Query: 196 PYLKKSNHAHILNISP--PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
           P+LK+   + I+N         N    +  + Y+ +K  +      +A+      I VNA
Sbjct: 169 PHLKQG--SAIINTGSITGYEGN----ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNA 222

Query: 254 LWP 256
           + P
Sbjct: 223 VAP 225

Length = 290

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 38.7 bits (91), Expect = 0.004
 Identities = 21/79 (26%), Positives = 38/79 (48%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +Q+AV+  + + G ID+LVNNA          + + +   +   N  G   +++  LP++
Sbjct: 60  VQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHM 119

Query: 199 KKSNHAHILNISPPLNLNP 217
           +      I+NIS  L   P
Sbjct: 120 RAQGSGRIINISSVLGFLP 138

Length = 270

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 31/170 (18%), Positives = 65/170 (38%), Gaps = 17/170 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E+ +  +   ++ G +++LV NA A        T  + ++ + ++ A G +L +++    
Sbjct: 63  EVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAAKR 122

Query: 198 LKKSNHAHIL--NISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
           +       I+    +  L           A+  +K+ +   A  MA E     I V  + 
Sbjct: 123 MLARGRGTIIFTGATASLRGRA----GFAAFAGAKFALRALAQSMARELGPKGIHVAHVI 178

Query: 256 PRTAIYTAAIEMLTGGSADAKATSRK------PEIMADAAYYILSSNPPS 299
               I T  I          +   ++      P+ +A+ AY+ L + P S
Sbjct: 179 IDGGIDTDFI----RERFPKRDERKEEDGILDPDAIAE-AYWQLHTQPRS 223

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 8/118 (6%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIV 72
           + G  + +G+ +    A+ G ++ +A   +E   K+       A E+  + G        
Sbjct: 7   VIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKV-------ADEINAEYGEKAYGFGA 59

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
           D  +E +V +      + F  +D+LV +A         +  L  +D   Q+N  G +L
Sbjct: 60  DATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFL 117

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 5  GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           +L G  + I G S G+G A+A  A K+GA + I ++      ++  T+          G
Sbjct: 1  MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVG 60

Query: 65 GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILV 98
                  D+    + ++ +  A      ID LV
Sbjct: 61 --------DVSSTESARNVIEKAAKVLNAIDGLV 86

Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	406
KOG1200|consensus	256		100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
KOG0725|consensus	270		100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
KOG1205|consensus	282		100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
KOG1201|consensus	300		100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
KOG1207|consensus	245		100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
KOG4169|consensus	261		100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
KOG1199|consensus	260		100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	99.98
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.98
PRK06197	306	short chain dehydrogenase; Provisional	99.98
PRK09072	263	short chain dehydrogenase; Provisional	99.98
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.98
PRK06179	270	short chain dehydrogenase; Provisional	99.98
PRK07060	245	short chain dehydrogenase; Provisional	99.98
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK06180	277	short chain dehydrogenase; Provisional	99.98
PRK06924	251	short chain dehydrogenase; Provisional	99.98
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
COG1028	251	FabG Dehydrogenases with different specificities (	99.98
KOG1208|consensus	314		99.98
PRK05650	270	short chain dehydrogenase; Provisional	99.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK08263	275	short chain dehydrogenase; Provisional	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK08267	260	short chain dehydrogenase; Provisional	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK08251	248	short chain dehydrogenase; Provisional	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
KOG1611|consensus	249		99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK09135	249	pteridine reductase; Provisional	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.96
KOG1209|consensus	289		99.96
PRK06101	240	short chain dehydrogenase; Provisional	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
KOG1014|consensus	312		99.96
KOG1610|consensus	322		99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
PRK08177	225	short chain dehydrogenase; Provisional	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK09291	257	short chain dehydrogenase; Provisional	99.95
KOG1210|consensus	331		99.95
KOG1204|consensus	253		99.94
KOG4170|consensus	113		99.93
PRK06953	222	short chain dehydrogenase; Provisional	99.93
PRK08219	227	short chain dehydrogenase; Provisional	99.93
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.92
KOG1478|consensus	341		99.91
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.89
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.84
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.84
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.81
PRK06720	169	hypothetical protein; Provisional	99.81
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.78
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.76
PLN02653	340	GDP-mannose 4,6-dehydratase	99.75
PLN02583	297	cinnamoyl-CoA reductase	99.71
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.69
PLN00198	338	anthocyanidin reductase; Provisional	99.68
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.65
PLN02650	351	dihydroflavonol-4-reductase	99.65
PLN02572	442	UDP-sulfoquinovose synthase	99.64
PLN02214	342	cinnamoyl-CoA reductase	99.64
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.64
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.64
PLN02240	352	UDP-glucose 4-epimerase	99.63
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.61
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.59
KOG1502|consensus	327		99.59
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.58
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.57
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.56
PF02036	102	SCP2: SCP-2 sterol transfer family; InterPro: IPR0	99.54
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.52
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.52
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.5
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.5
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.49
PLN02686	367	cinnamoyl-CoA reductase	99.49
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.48
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.44
PLN02427	386	UDP-apiose/xylose synthase	99.43
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.42
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.36
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.36
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.34
COG3255	134	Putative sterol carrier protein [Lipid metabolism]	99.34
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.34
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.33
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.32
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.31
CHL00194	317	ycf39 Ycf39; Provisional	99.29
PLN02260	668	probable rhamnose biosynthetic enzyme	99.28
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.26
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.24
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.23
KOG4022|consensus	236		99.21
PLN02206	442	UDP-glucuronate decarboxylase	99.21
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.2
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.2
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.18
KOG1371|consensus	343		99.15
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.14
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.11
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.1
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.09
PRK05865	854	hypothetical protein; Provisional	99.07
PRK07201	657	short chain dehydrogenase; Provisional	99.03
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.0
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.0
PLN02778	298	3,5-epimerase/4-reductase	98.97
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.96
PLN02996	491	fatty acyl-CoA reductase	98.96
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.92
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.9
PRK08309	177	short chain dehydrogenase; Provisional	98.85
KOG1430|consensus	361		98.78
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.74
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.72
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.71
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.71
PLN02503	605	fatty acyl-CoA reductase 2	98.64
PLN00016	378	RNA-binding protein; Provisional	98.63
PLN02260	668	probable rhamnose biosynthetic enzyme	98.62
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.55
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.49
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.48
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.38
PRK12320	699	hypothetical protein; Provisional	98.31
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.31
KOG1202|consensus	2376		98.26
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.25
PF14864	125	Alkyl_sulf_C: Alkyl sulfatase C-terminal; PDB: 2CG	98.24
KOG2865|consensus	391		98.1
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.09
KOG1429|consensus	350		98.05
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.99
COG3154	168	Putative lipid carrier protein [Lipid metabolism]	97.88
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.84
KOG2733|consensus	423		97.79
KOG0747|consensus	331		97.78
PRK09620	229	hypothetical protein; Provisional	97.75
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.7
KOG1221|consensus	467		97.7
KOG1431|consensus	315		97.64
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.53
KOG1372|consensus	376		97.53
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.52
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.46
PLN00106	323	malate dehydrogenase	97.43
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.36
KOG1203|consensus	411		97.31
PTZ00325	321	malate dehydrogenase; Provisional	97.3
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.28
COG2910	211	Putative NADH-flavin reductase [General function p	97.15
PRK14982	340	acyl-ACP reductase; Provisional	97.07
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	96.97
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.92
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.91
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.86
KOG4039|consensus	238		96.84
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.79
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.7
KOG2774|consensus	366		96.56
PRK06849	389	hypothetical protein; Provisional	96.54
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.53
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.45
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.43
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.39
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.35
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.35
PRK05086	312	malate dehydrogenase; Provisional	96.31
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.31
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.27
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.26
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.26
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.25
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.17
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.09
KOG1198|consensus	347		96.01
COG2015	655	Alkyl sulfatase and related hydrolases [Secondary	95.96
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.96
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.87
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.87
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.86
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.81
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.79
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.77
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.72
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.69
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.65
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.6
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.59
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.58
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.49
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.48
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.44
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.43
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.42
COG3268	382	Uncharacterized conserved protein [Function unknow	95.4
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.39
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.37
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.35
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.29
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.26
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.19
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.15
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.08
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.0
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.98
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	94.95
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.88
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.83
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.82
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	94.69
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	94.65
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.53
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.5
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.49
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.48
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.36
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.31
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.29
PLN02740	381	Alcohol dehydrogenase-like	94.25
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.15
COG2130	340	Putative NADP-dependent oxidoreductases [General f	94.12
PRK14968	188	putative methyltransferase; Provisional	94.07
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.07
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.04
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.02
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.01
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	93.98
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	93.94
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	93.94
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	93.89
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	93.86
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	93.83
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	93.8
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	93.8
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.8
PTZ00354	334	alcohol dehydrogenase; Provisional	93.79
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	93.79
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	93.77
KOG1205|consensus	282		93.7
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	93.69
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	93.68
PRK06719	157	precorrin-2 dehydrogenase; Validated	93.65
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	93.65
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	93.62
PRK08328	231	hypothetical protein; Provisional	93.59
PRK05442	326	malate dehydrogenase; Provisional	93.54
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.53
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.53
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.42
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.42
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.33
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	93.3
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.28
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	93.27
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	93.26
PRK04148	134	hypothetical protein; Provisional	93.24
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.15
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	93.13
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	93.12
PTZ00117	319	malate dehydrogenase; Provisional	93.02
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	92.96
COG0300	265	DltE Short-chain dehydrogenases of various substra	92.92
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	92.9
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	92.9
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	92.88
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	92.88
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	92.84
PLN02827	378	Alcohol dehydrogenase-like	92.81
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	92.81
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	92.8
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	92.79
COG3165	204	Uncharacterized protein conserved in bacteria [Fun	92.79
PRK09496	453	trkA potassium transporter peripheral membrane com	92.73
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	92.72
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	92.71
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	92.68
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	92.67
PRK08223	287	hypothetical protein; Validated	92.62
PLN02178	375	cinnamyl-alcohol dehydrogenase	92.61
PLN00203	519	glutamyl-tRNA reductase	92.61
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	92.6
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	92.54
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	92.52
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	92.51
PLN02586	360	probable cinnamyl alcohol dehydrogenase	92.46
KOG1201|consensus	300		92.4
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	92.38
PRK12480	330	D-lactate dehydrogenase; Provisional	92.29
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.21
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	92.19
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	92.18
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	92.17
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	92.15
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	92.14
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	92.11
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	92.1
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	92.05
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	92.04
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	91.96
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	91.95
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	91.86
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	91.85
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	91.82
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	91.79
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	91.66
PRK06153	393	hypothetical protein; Provisional	91.66
KOG0024|consensus	354		91.58
PTZ00082	321	L-lactate dehydrogenase; Provisional	91.48
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	91.44
KOG1196|consensus	343		91.44
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	91.44
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	91.41
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	91.35
KOG1208|consensus	314		91.33
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	91.33
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	91.2
PRK05479	330	ketol-acid reductoisomerase; Provisional	91.14
PLN03139	386	formate dehydrogenase; Provisional	91.1
PTZ00075	476	Adenosylhomocysteinase; Provisional	91.01
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.89
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	90.83
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	90.82
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	90.82
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	90.82
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	90.71
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.68
cd08252	336	AL_MDR Arginate lyase and other MDR family members	90.65

>KOG1200|consensus

Probab=100.00  E-value=3e-47  Score=325.92  Aligned_cols=236  Identities=23%  Similarity=0.286  Sum_probs=207.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++..|+++||||++|||+++++.|+++|++|++++++....       ++++..+..+ +....+.||+++.++++..+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A-------~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l   81 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA-------EATAGDLGGY-GDHSAFSCDVSKAHDVQNTL   81 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH-------HHHHhhcCCC-CccceeeeccCcHHHHHHHH
Confidence            367899999999999999999999999999999999987742       2344445444 35678899999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ++..+.+|++++|||||||..+....                                                      
T Consensus        82 ~e~~k~~g~psvlVncAGItrD~~Ll------------------------------------------------------  107 (256)
T KOG1200|consen   82 EEMEKSLGTPSVLVNCAGITRDGLLL------------------------------------------------------  107 (256)
T ss_pred             HHHHHhcCCCcEEEEcCcccccccee------------------------------------------------------
Confidence            99999999999999999998776554                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHh--HhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL--KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m--~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+..++|+.++.+|+.|.|+++|++.+.|  .++++++|||+||+.+..++  .++..|++||+++.+|+|+.|+
T Consensus       108 -----rmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN--~GQtnYAAsK~GvIgftktaAr  180 (256)
T KOG1200|consen  108 -----RMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN--FGQTNYAASKGGVIGFTKTAAR  180 (256)
T ss_pred             -----eccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc--ccchhhhhhcCceeeeeHHHHH
Confidence                 89999999999999999999999999984  44455699999999999985  6899999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++.+|||||+|+||+ +.|+|.+.+++..      .-|..|.++|||||+.++||+|+.++|+||+.+ ++||.
T Consensus       181 Ela~knIrvN~VlPGF-I~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  181 ELARKNIRVNVVLPGF-IATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             HHhhcCceEeEecccc-ccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccceeEEEeccc
Confidence            9999999999999996 7888888776543      237788999999999999999999999999999 77664

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.9e-43  Score=314.90  Aligned_cols=224  Identities=29%  Similarity=0.424  Sum_probs=191.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |..+++|+++|||||+|||.++|++|+++|++|++++|+.++++       +.+.++.+  +++.++.+|++|.++++++
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~-------~la~~~~~--~~~~~~~~DVtD~~~~~~~   71 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLE-------ALADEIGA--GAALALALDVTDRAAVEAA   71 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHH-------HHHHhhcc--CceEEEeeccCCHHHHHHH
Confidence            34578899999999999999999999999999999999988743       45555544  6789999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.++|++||+||||||.....+..                                                     
T Consensus        72 i~~~~~~~g~iDiLvNNAGl~~g~~~~-----------------------------------------------------   98 (246)
T COG4221          72 IEALPEEFGRIDILVNNAGLALGDPLD-----------------------------------------------------   98 (246)
T ss_pred             HHHHHHhhCcccEEEecCCCCcCChhh-----------------------------------------------------
Confidence            999999999999999999987664433                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.|.++.+++++|.|.+++.|+|||+||+++..+  +++...|+++|+++.+|++.|..|
T Consensus        99 ------~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~--y~~~~vY~ATK~aV~~fs~~LR~e  170 (246)
T COG4221          99 ------EADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP--YPGGAVYGATKAAVRAFSLGLRQE  170 (246)
T ss_pred             ------hCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc--CCCCccchhhHHHHHHHHHHHHHH
Confidence                  899999999999999999999999999999999999999999999988  589999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcc------cccccCChhhHHHHHHHhhcCCC
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSAD------AKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~------~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +..++|||.+|+||.+.++............      ......+|+|+|++++|.++.+.
T Consensus       171 ~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~  230 (246)
T COG4221         171 LAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQ  230 (246)
T ss_pred             hcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999964344322211111100      12335799999999999998643

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-42  Score=326.54  Aligned_cols=237  Identities=17%  Similarity=0.245  Sum_probs=200.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.+++       ++..+++... +.++.++.+|++|+++++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~   76 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENL-------KKAREKIKSESNVDVSYIVADLTKREDLERT   76 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence            358999999999999999999999999999999999986643       2344455443 56788999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++. .+|++|++|||||.......                                                      
T Consensus        77 ~~~~~-~~g~iD~lv~nag~~~~~~~------------------------------------------------------  101 (263)
T PRK08339         77 VKELK-NIGEPDIFFFSTGGPKPGYF------------------------------------------------------  101 (263)
T ss_pred             HHHHH-hhCCCcEEEECCCCCCCCCc------------------------------------------------------
Confidence            99985 58999999999997543332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+  .+++..|+++|+|+.+|+++++.|
T Consensus       102 -----~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~--~~~~~~y~asKaal~~l~~~la~e  174 (263)
T PRK08339        102 -----MEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP--IPNIALSNVVRISMAGLVRTLAKE  174 (263)
T ss_pred             -----ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC--CCcchhhHHHHHHHHHHHHHHHHH
Confidence                 3789999999999999999999999999999988899999999998876  477889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC-----------------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG-----------------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~-----------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      ++++|||||+|+||+ +.|++......                 ....|..+..+|+|+|++++||+++.+.++||+++ 
T Consensus       175 l~~~gIrVn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~  253 (263)
T PRK08339        175 LGPKGITVNGIMPGI-IRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIP  253 (263)
T ss_pred             hcccCeEEEEEEeCc-CccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEE
Confidence            999999999999996 56655432210                 01124567789999999999999999999999999 


Q ss_pred             EehhHH
Q psy6113         306 IDDEVL  311 (406)
Q Consensus       306 ~d~g~~  311 (406)
                      +|+|..
T Consensus       254 vdgG~~  259 (263)
T PRK08339        254 VDGGRL  259 (263)
T ss_pred             ECCCcc
Confidence            776654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-42  Score=322.24  Aligned_cols=236  Identities=28%  Similarity=0.331  Sum_probs=200.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++++||+++||||++|||+++|++|+++|++|++++|+..         ....++++..+.++.++.+|++++++++++
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~---------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (251)
T PRK12481          3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA---------PETQAQVEALGRKFHFITADLIQQKDIDSI   73 (251)
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH---------HHHHHHHHHcCCeEEEEEeCCCCHHHHHHH
Confidence            45789999999999999999999999999999999988642         123445556677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+.                                                      
T Consensus        74 ~~~~~~~~g~iD~lv~~ag~~~~~~~------------------------------------------------------   99 (251)
T PRK12481         74 VSQAVEVMGHIDILINNAGIIRRQDL------------------------------------------------------   99 (251)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCc------------------------------------------------------
Confidence            99999999999999999998654332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       100 -----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~  172 (251)
T PRK12481        100 -----LEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG--GIRVPSYTASKSAVMGLTRALAT  172 (251)
T ss_pred             -----ccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC--CCCCcchHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999998765 589999999998876  36778999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++|||||+|+||+ +.|++.+......        ..|..++.+|+|+|++++||+++.+.++||+.+ +|+|+
T Consensus       173 e~~~~girvn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        173 ELSQYNINVNAIAPGY-MATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             HHhhcCeEEEEEecCC-CccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCCE
Confidence            9999999999999996 5665543322111        124567789999999999999999999999999 77664

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-42  Score=325.52  Aligned_cols=237  Identities=16%  Similarity=0.210  Sum_probs=193.3

Q ss_pred             ccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHH
Q psy6113           6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         6 ~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .|+||+++||||+  +|||+++|++|+++|++|++++|+.+.        .+..+++ .+.+.. .++++|++|++++++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~--------~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~   72 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL--------KKRVEPIAQELGSD-YVYELDVSKPEHFKS   72 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH--------HHHHHHHHHhcCCc-eEEEecCCCHHHHHH
Confidence            4689999999997  899999999999999999999997421        1122222 223434 678999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+......                                                     
T Consensus        73 ~~~~i~~~~g~iDilVnnAG~~~~~~~-----------------------------------------------------   99 (274)
T PRK08415         73 LAESLKKDLGKIDFIVHSVAFAPKEAL-----------------------------------------------------   99 (274)
T ss_pred             HHHHHHHHcCCCCEEEECCccCccccc-----------------------------------------------------
Confidence            999999999999999999997532110                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                        ..++.+.+.++|++++++|+.++++++++++|+|+++  |+||++||..+..+  .+++..|++||+|+.+|+++|+.
T Consensus       100 --~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~  173 (274)
T PRK08415        100 --EGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKY--VPHYNVMGVAKAALESSVRYLAV  173 (274)
T ss_pred             --ccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccC--CCcchhhhhHHHHHHHHHHHHHH
Confidence              0123478899999999999999999999999999763  89999999988766  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++|||||+|+||+ +.|++......        ....|..+..+|+|||++++||+++.+.++||+.+ +|+|+.
T Consensus       174 el~~~gIrVn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~  250 (274)
T PRK08415        174 DLGKKGIRVNAISAGP-IKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYN  250 (274)
T ss_pred             HhhhcCeEEEEEecCc-cccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCccc
Confidence            9999999999999996 56655432111        01134567789999999999999998999999999 676653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5e-42  Score=325.28  Aligned_cols=237  Identities=17%  Similarity=0.198  Sum_probs=192.6

Q ss_pred             ccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHH
Q psy6113           6 KLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         6 ~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+.+..        +..+++ ...+. ..++++|++|++++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~   74 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG--------KRVKPLAESLGS-DFVLPCDVEDIASVDA   74 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH--------HHHHHHHHhcCC-ceEEeCCCCCHHHHHH
Confidence            47899999999997  999999999999999999999874321        112222 22233 3578999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+++|++|+||||||+....+..                                                    
T Consensus        75 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~----------------------------------------------------  102 (271)
T PRK06505         75 VFEALEKKWGKLDFVVHAIGFSDKNELK----------------------------------------------------  102 (271)
T ss_pred             HHHHHHHHhCCCCEEEECCccCCCcccc----------------------------------------------------
Confidence            9999999999999999999975421100                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                         .++.+.+.++|++++++|+.++++++|+++|+|++  .|+||++||..+..+  .+++.+|++||+|+.+|+|+|+.
T Consensus       103 ---~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~--~~~~~~Y~asKaAl~~l~r~la~  175 (271)
T PRK06505        103 ---GRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRV--MPNYNVMGVAKAALEASVRYLAA  175 (271)
T ss_pred             ---CChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCcccc--CCccchhhhhHHHHHHHHHHHHH
Confidence               12237889999999999999999999999999974  489999999988766  47888999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++|||||+|+||+ +.|++.+....        ....|..+..+|+|+|++++||+++.++++||+.+ +|+|+.
T Consensus       176 el~~~gIrVn~v~PG~-i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        176 DYGPQGIRVNAISAGP-VRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             HHhhcCeEEEEEecCC-ccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCceEEeecCCcc
Confidence            9999999999999996 55654321111        01124567789999999999999999999999999 676653

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-41  Score=320.59  Aligned_cols=270  Identities=64%  Similarity=0.996  Sum_probs=230.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+++++|+++||||++|||+++|+.|+++|++|++++|+.+...+....+++..+++...+.++.++.+|++++++++++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            45689999999999999999999999999999999999876544444445566677777788899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+..                                                     
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~-----------------------------------------------------  107 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTE-----------------------------------------------------  107 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCcc-----------------------------------------------------
Confidence            999999999999999999976443322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.+++++..|++||++++.++++++.|
T Consensus       108 ------~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  181 (273)
T PRK08278        108 ------DTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEE  181 (273)
T ss_pred             ------cCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHH
Confidence                  78889999999999999999999999999998889999999988776643477889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehhHHHHhcc-cccCcc
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI-DLEQYS  322 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~~~~~~~-~~~~~~  322 (406)
                      ++++||+||+|+||++++|++.+..... ..+..+..+|+++|+.+++|+++.+.++||+++.|+++.+..|+ |++-|.
T Consensus       182 l~~~~I~v~~i~Pg~~i~t~~~~~~~~~-~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~  260 (273)
T PRK08278        182 FRDDGIAVNALWPRTTIATAAVRNLLGG-DEAMRRSRTPEIMADAAYEILSRPAREFTGNFLIDEEVLREAGVTDFSRYA  260 (273)
T ss_pred             hhhcCcEEEEEeCCCccccHHHHhcccc-cccccccCCHHHHHHHHHHHhcCccccceeEEEeccchhhccCcchhhhhc
Confidence            9999999999999965677665544322 23345678999999999999999888999999999999999998 988888


Q ss_pred             ccCCCCCCcce
Q psy6113         323 YVPNGAAEGSW  333 (406)
Q Consensus       323 ~~~~~~~~g~w  333 (406)
                      +.|+......+
T Consensus       261 ~~~~~~~~~~~  271 (273)
T PRK08278        261 VDPGAPLMPDL  271 (273)
T ss_pred             cCCCCCCCccc
Confidence            87776544433

>KOG0725|consensus

Probab=100.00  E-value=7.8e-42  Score=321.56  Aligned_cols=242  Identities=34%  Similarity=0.465  Sum_probs=201.4

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc---CCeeeeeeecCCChHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA---GGNCLPCIVDIRDEHA   79 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~---g~~~~~~~~Dl~~~~~   79 (406)
                      .+.+|.||+++|||+++|||+++|++|++.|++|++++|+.++++       +...++...   +.++..+.||+++.++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   74 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLE-------ETAQELGGLGYTGGKVLAIVCDVSKEVD   74 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHHhcCCCCCeeEEEECcCCCHHH
Confidence            457899999999999999999999999999999999999988643       344444444   3469999999999999


Q ss_pred             HHHHHHHHHHh-cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          80 VQSAVNAAVDK-FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        80 v~~~~~~i~~~-~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++..++ +|+||+||||||......                                                  
T Consensus        75 ~~~l~~~~~~~~~GkidiLvnnag~~~~~~--------------------------------------------------  104 (270)
T KOG0725|consen   75 VEKLVEFAVEKFFGKIDILVNNAGALGLTG--------------------------------------------------  104 (270)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcCCcCCCCC--------------------------------------------------
Confidence            99999999999 799999999999876543                                                  


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhh-HHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINAR-GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~-g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                              ++.+.+.++|++++++|+. +.+.+.+.+.|++++++.|+|+++||..+..+.+..+ ..|++||+|+++|+
T Consensus       105 --------~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~-~~Y~~sK~al~~lt  175 (270)
T KOG0725|consen  105 --------SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG-VAYGVSKAALLQLT  175 (270)
T ss_pred             --------ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc-ccchhHHHHHHHHH
Confidence                    1238999999999999999 5777777888888888899999999999987742222 79999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHh---------c----CCCcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEML---------T----GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~---------~----~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      |++|.||+++|||||+|+||. +.|++....         .    .....|..+..+|+|+|+.++||+++.++|+||+.
T Consensus       176 r~lA~El~~~gIRvN~v~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~  254 (270)
T KOG0725|consen  176 RSLAKELAKHGIRVNSVSPGL-VKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQT  254 (270)
T ss_pred             HHHHHHHhhcCcEEEEeecCc-EeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCcccccccCCE
Confidence            999999999999999999995 556541100         0    11123577889999999999999998877999999


Q ss_pred             E-EehhHH
Q psy6113         305 L-IDDEVL  311 (406)
Q Consensus       305 i-~d~g~~  311 (406)
                      + +|+|..
T Consensus       255 i~vdgG~~  262 (270)
T KOG0725|consen  255 IIVDGGFT  262 (270)
T ss_pred             EEEeCCEE
Confidence            9 666543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.1e-41  Score=320.78  Aligned_cols=242  Identities=20%  Similarity=0.241  Sum_probs=198.0

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      |.+++||+++||||+  +|||+++|++|+++|++|++++|+.+...     .++..+++.+.+.++.++++|++|+++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~   75 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGR-----FEKKVRELTEPLNPSLFLPCDVQDDAQIE   75 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccch-----HHHHHHHHHhccCcceEeecCcCCHHHHH
Confidence            356899999999986  89999999999999999999887654321     22344555555556778899999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.+|++|+||||||+.......                                                   
T Consensus        76 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~---------------------------------------------------  104 (258)
T PRK07370         76 ETFETIKQKWGKLDILVHCLAFAGKEELI---------------------------------------------------  104 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcccccCccccc---------------------------------------------------
Confidence            99999999999999999999975321100                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          .++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+  .+++..|++||+|+.+|+++|+
T Consensus       105 ----~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la  176 (258)
T PRK07370        105 ----GDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRA--IPNYNVMGVAKAALEASVRYLA  176 (258)
T ss_pred             ----CcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccC--CcccchhhHHHHHHHHHHHHHH
Confidence                12237889999999999999999999999999975  389999999988876  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .|++++||+||+|+||+ +.|++.+....        ....+..+..+|+|+|++++||+++.+.++||+.+ +|+|+
T Consensus       177 ~el~~~gI~Vn~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        177 AELGPKNIRVNAISAGP-IRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHhCcCCeEEEEEecCc-ccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence            99999999999999996 56654332211        01124567789999999999999999999999988 66654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-41  Score=319.90  Aligned_cols=242  Identities=17%  Similarity=0.188  Sum_probs=196.5

Q ss_pred             CcccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      |.+|+||+++||||  ++|||+++|++|+++|++|++++|+...        .+..+++....+....++||++|+++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   72 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL--------EERVRKMAAELDSELVFRCDVASDDEIN   72 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH--------HHHHHHHHhccCCceEEECCCCCHHHHH
Confidence            45689999999997  6799999999999999999998876321        1233444433344567899999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|+||+||||||+........                                                  
T Consensus        73 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~--------------------------------------------------  102 (261)
T PRK08690         73 QVFADLGKHWDGLDGLVHSIGFAPKEALSG--------------------------------------------------  102 (261)
T ss_pred             HHHHHHHHHhCCCcEEEECCccCCcccccc--------------------------------------------------
Confidence            999999999999999999999864321100                                                  


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          ..+.+.+.++|+.++++|+.++++++++++|+|++++ |+||++||..+..+  .+++..|++||+|+.+|+++++
T Consensus       103 ----~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~--~~~~~~Y~asKaal~~l~~~la  175 (261)
T PRK08690        103 ----DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRA--IPNYNVMGMAKASLEAGIRFTA  175 (261)
T ss_pred             ----chhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccC--CCCcccchhHHHHHHHHHHHHH
Confidence                0012677889999999999999999999999997654 89999999998876  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++|||||+|+||+ +.|++.......        ...|..++.+|+|||++++||+++.+.++||+.+ +|+|+.
T Consensus       176 ~e~~~~gIrVn~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        176 ACLGKEGIRCNGISAGP-IKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYS  253 (261)
T ss_pred             HHhhhcCeEEEEEecCc-ccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCcc
Confidence            99999999999999996 566654322110        1135567889999999999999999999999999 776643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-41  Score=318.72  Aligned_cols=238  Identities=19%  Similarity=0.229  Sum_probs=193.6

Q ss_pred             CcccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v   80 (406)
                      +..++||+++||||++  |||+++|++|+++|++|++++|+.. .       .+..+++... +. ..++++|++|++++
T Consensus         3 ~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~-------~~~~~~l~~~~g~-~~~~~~Dv~~~~~v   73 (260)
T PRK06603          3 TGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-L-------EKRVKPLAEEIGC-NFVSELDVTNPKSI   73 (260)
T ss_pred             CcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-H-------HHHHHHHHHhcCC-ceEEEccCCCHHHH
Confidence            4568999999999997  9999999999999999999988732 1       1223333332 33 34678999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+......                                                   
T Consensus        74 ~~~~~~~~~~~g~iDilVnnag~~~~~~~---------------------------------------------------  102 (260)
T PRK06603         74 SNLFDDIKEKWGSFDFLLHGMAFADKNEL---------------------------------------------------  102 (260)
T ss_pred             HHHHHHHHHHcCCccEEEEccccCCcccc---------------------------------------------------
Confidence            99999999999999999999997532110                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                          ..++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+  .+++..|++||+|+.+|+++|
T Consensus       103 ----~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~l  174 (260)
T PRK06603        103 ----KGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKV--IPNYNVMGVAKAALEASVKYL  174 (260)
T ss_pred             ----cCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccC--CCcccchhhHHHHHHHHHHHH
Confidence                012347889999999999999999999999999964  489999999988765  477889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.|++++|||||+|+||+ +.|++.+.....        ...|..++.+|+|+|++++||+++.+.++||+.+ +|+|+
T Consensus       175 a~el~~~gIrVn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        175 ANDMGENNIRVNAISAGP-IKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHhhhcCeEEEEEecCc-CcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcc
Confidence            999999999999999996 566654321110        0124567789999999999999999999999999 66664

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-41  Score=317.48  Aligned_cols=242  Identities=15%  Similarity=0.161  Sum_probs=197.4

Q ss_pred             CCCCcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           1 MINTGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      |.+.++++||+++||||+  +|||+++|++|+++|++|++++|+.+..+        ..+++........+++||++|++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~--------~~~~~~~~~~~~~~~~~D~~~~~   73 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP--------YVEPLAEELDAPIFLPLDVREPG   73 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH--------HHHHHHHhhccceEEecCcCCHH
Confidence            678889999999999998  59999999999999999999999754211        12222222223567899999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.+|++|+||||||+....+.                                                 
T Consensus        74 ~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~-------------------------------------------------  104 (258)
T PRK07533         74 QLEAVFARIAEEWGRLDFLLHSIAFAPKEDL-------------------------------------------------  104 (258)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccCCcccc-------------------------------------------------
Confidence            9999999999999999999999997532111                                                 


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                            ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+|+.+|++
T Consensus       105 ------~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~--~~~~~~Y~asKaal~~l~~  174 (258)
T PRK07533        105 ------HGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKV--VENYNLMGPVKAALESSVR  174 (258)
T ss_pred             ------cCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccC--CccchhhHHHHHHHHHHHH
Confidence                  012347889999999999999999999999999964  489999999988765  4778899999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +|+.|++++|||||+|+||+ +.|++.+.....        ...+..+..+|+|+|++++||+++.++++||+.+ +|+|
T Consensus       175 ~la~el~~~gI~Vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        175 YLAAELGPKGIRVHAISPGP-LKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHhhhcCcEEEEEecCC-cCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence            99999999999999999996 566554322110        1124456789999999999999998999999999 6666


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      +
T Consensus       254 ~  254 (258)
T PRK07533        254 Y  254 (258)
T ss_pred             c
Confidence            4

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-41  Score=318.94  Aligned_cols=235  Identities=20%  Similarity=0.264  Sum_probs=193.9

Q ss_pred             ccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .|+||+++||||+  +|||+++|++|+++|++|++++|+. +.       .+..+++.  +.++.++++|++++++++++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~-------~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~   73 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RM-------KKSLQKLV--DEEDLLVECDVASDESIERA   73 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HH-------HHHHHhhc--cCceeEEeCCCCCHHHHHHH
Confidence            5789999999999  8999999999999999999999973 21       12222322  34678899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+.......                                                     
T Consensus        74 ~~~~~~~~g~iD~lv~nAg~~~~~~~~-----------------------------------------------------  100 (252)
T PRK06079         74 FATIKERVGKIDGIVHAIAYAKKEELG-----------------------------------------------------  100 (252)
T ss_pred             HHHHHHHhCCCCEEEEccccccccccc-----------------------------------------------------
Confidence            999999999999999999976432110                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                        .++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+  .+++..|++||+|+.+|+++++.|
T Consensus       101 --~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~--~~~~~~Y~asKaal~~l~~~la~e  174 (252)
T PRK06079        101 --GNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERA--IPNYNVMGIAKAALESSVRYLARD  174 (252)
T ss_pred             --CCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCcccc--CCcchhhHHHHHHHHHHHHHHHHH
Confidence              12347889999999999999999999999999975  489999999988876  478889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ +.|++.......        ...+..+..+|+|||++++||+++.+.++||+.+ +|+|+
T Consensus       175 l~~~gI~vn~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        175 LGKKGIRVNAISAGA-VKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             hhhcCcEEEEEecCc-ccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            999999999999996 566543221110        1124567889999999999999999999999999 66653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-41  Score=316.83  Aligned_cols=241  Identities=18%  Similarity=0.208  Sum_probs=196.4

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      +.+++||+++||||+  +|||+++|++|+++|++|++++|+.+..+    .+++..+++.  +.++.++++|++|+++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~----~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~   75 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEK----EVRELADTLE--GQESLLLPCDVTSDEEIT   75 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchH----HHHHHHHHcC--CCceEEEecCCCCHHHHH
Confidence            457899999999997  89999999999999999999988643211    1233333321  467888999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+||||||+.......                                                   
T Consensus        76 ~~~~~~~~~~g~ld~lv~nag~~~~~~~~---------------------------------------------------  104 (257)
T PRK08594         76 ACFETIKEEVGVIHGVAHCIAFANKEDLR---------------------------------------------------  104 (257)
T ss_pred             HHHHHHHHhCCCccEEEECcccCCCCcCC---------------------------------------------------
Confidence            99999999999999999999975321100                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          .++.+.+.++|.+++++|+.+++.++++++|+|.+  .|+||++||..+..+  .+++..|++||+|+.+|+++++
T Consensus       105 ----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la  176 (257)
T PRK08594        105 ----GEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERV--VQNYNVMGVAKASLEASVKYLA  176 (257)
T ss_pred             ----CccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccC--CCCCchhHHHHHHHHHHHHHHH
Confidence                12237888999999999999999999999999965  489999999998876  4678899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .|++++|||||+|+||+ +.|++.+.....        ...+..+..+|+|+|++++||+++.++++||+++ +|+|+
T Consensus       177 ~el~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        177 NDLGKDGIRVNAISAGP-IRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             HHhhhcCCEEeeeecCc-ccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEEEECCch
Confidence            99999999999999996 666554322110        0124456789999999999999999999999999 77664

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-41  Score=316.62  Aligned_cols=242  Identities=28%  Similarity=0.385  Sum_probs=202.5

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .++++++||+++||||++|||++++++|+++|++|++++|+.++       +++..+++...+.++.++.+|++++++++
T Consensus         2 ~~~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~   74 (253)
T PRK05867          2 LDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA-------LEKLADEIGTSGGKVVPVCCDVSQHQQVT   74 (253)
T ss_pred             cccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence            35667899999999999999999999999999999999998654       33455666666778889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|+||||||+....+..                                                   
T Consensus        75 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~---------------------------------------------------  103 (253)
T PRK05867         75 SMLDQVTAELGGIDIAVCNAGIITVTPML---------------------------------------------------  103 (253)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCChh---------------------------------------------------
Confidence            99999999999999999999976443322                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              +.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..+........|++||+|+++|++++
T Consensus       104 --------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~l  175 (253)
T PRK05867        104 --------DMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAM  175 (253)
T ss_pred             --------hCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHH
Confidence                    778899999999999999999999999998764 57999999988764321124578999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcC-----CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTG-----GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~-----~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.|++++||+||+|+||+ +.|++.+....     ....+..++.+|+|+|++++||+++.+.++||+.+ +|+|+
T Consensus       176 a~e~~~~gI~vn~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        176 AVELAPHKIRVNSVSPGY-ILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHhHhCeEEEEeecCC-CCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence            999999999999999996 56655332111     01124567889999999999999999999999999 77764

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-41  Score=314.68  Aligned_cols=237  Identities=27%  Similarity=0.377  Sum_probs=202.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH--cCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--AGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~--~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+.+       ++..+++..  .+.++.++.+|+++++++++
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   75 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALA-------ERAAAAIARDVAGARVLAVPADVTDAASVAA   75 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhccCCceEEEEEccCCCHHHHHH
Confidence            468999999999999999999999999999999999986642       344555554  46678899999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+.......                                                    
T Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~----------------------------------------------------  103 (260)
T PRK07063         76 AVAAAEEAFGPLDVLVNNAGINVFADPL----------------------------------------------------  103 (260)
T ss_pred             HHHHHHHHhCCCcEEEECCCcCCCCChh----------------------------------------------------
Confidence            9999999999999999999975433222                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|+.++++|+.+++.++++++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+++++.
T Consensus       104 -------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~  174 (260)
T PRK07063        104 -------AMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI--IPGCFPYPVAKHGLLGLTRALGI  174 (260)
T ss_pred             -------hCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC--CCCchHHHHHHHHHHHHHHHHHH
Confidence                   678899999999999999999999999999888899999999988876  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC---C---------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG---G---------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~---~---------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |++++|||||+|+||+ +.|++......   .         ...+..+..+|+|+|++++||+++.+.++||+.+ +|+|
T Consensus       175 el~~~gIrvn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg  253 (260)
T PRK07063        175 EYAARNVRVNAIAPGY-IETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGG  253 (260)
T ss_pred             HhCccCeEEEEEeeCC-ccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCC
Confidence            9999999999999996 56655432211   0         0124466789999999999999999999999999 6766


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      .
T Consensus       254 ~  254 (260)
T PRK07063        254 R  254 (260)
T ss_pred             e
Confidence            4

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-40  Score=317.67  Aligned_cols=258  Identities=21%  Similarity=0.252  Sum_probs=206.0

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC---CcccHHHHHHHHHHcCCeeeeeeecCCChHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK---LPGTIYSAAKEVEDAGGNCLPCIVDIRDEHA   79 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~---~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~   79 (406)
                      +|.+|+||+++||||++|||+++|++|+++|++|++++|+.+...+   ..+.+.+..+++...+.++.++++|++++++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            3567899999999999999999999999999999999998643211   1123455566676677788899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEecc-cccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnA-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      ++++++++.++||+||+||||| |.......                                                 
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~-------------------------------------------------  112 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEW-------------------------------------------------  112 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCccccccccc-------------------------------------------------
Confidence            9999999999999999999999 74211000                                                 


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC-CccCCchhhhHhhHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP-FWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~-~~~~~~~~Y~asKaal~~l~  237 (406)
                            ..++.+.+.++|.+++++|+.+++.++++++|+|++++.|+||++||..+... ...++...|++||+|+.+|+
T Consensus       113 ------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt  186 (305)
T PRK08303        113 ------GKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLA  186 (305)
T ss_pred             ------CCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHH
Confidence                  01223778899999999999999999999999998887799999999765432 11345678999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHh-c--CCC------ccc-ccccCChhhHHHHHHHhhcCCC-CCccceEEE
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEML-T--GGS------ADA-KATSRKPEIMADAAYYILSSNP-PSLTGQFLI  306 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~-~--~~~------~~~-~~~~~~pe~vA~~v~~L~s~~~-~~~tG~~i~  306 (406)
                      ++|+.|++++|||||+|+||+ +.|++.... .  ...      ..+ ..+..+|+|+|++++||+++.. .++||+++.
T Consensus       187 ~~La~el~~~gIrVn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        187 FSLAHELAPHGATAVALTPGW-LRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHhhhcCcEEEEecCCc-cccHHHHHhhccCccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            999999999999999999996 566654321 1  100      112 2345689999999999999874 689999999


Q ss_pred             ehhHHHHhcc
Q psy6113         307 DDEVLKAQHI  316 (406)
Q Consensus       307 d~g~~~~~~~  316 (406)
                      +....+..++
T Consensus       266 ~~~~~~~~~~  275 (305)
T PRK08303        266 SGQLARVYGF  275 (305)
T ss_pred             hHHHHHhcCc
Confidence            9988877766

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-41  Score=320.68  Aligned_cols=244  Identities=26%  Similarity=0.380  Sum_probs=199.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC--CCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH--PKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~--~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ..++||+++||||++|||+++|++|+++|++|++++|+....  ....+.+.+..+++...+.++.++.+|++|++++++
T Consensus         2 ~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          2 GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             CccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence            458899999999999999999999999999999998875110  001122445566677677888899999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+....+.                                                     
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~-----------------------------------------------------  108 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMI-----------------------------------------------------  108 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCc-----------------------------------------------------
Confidence            999999999999999999998644322                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC------CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN------HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~------~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l  236 (406)
                            .+.+.++|++++++|+.++++++++++|+|+++.      .|+||++||.++..+  .+++..|++||+|+.+|
T Consensus       109 ------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l  180 (286)
T PRK07791        109 ------ANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG--SVGQGNYSAAKAGIAAL  180 (286)
T ss_pred             ------ccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC--CCCchhhHHHHHHHHHH
Confidence                  2788999999999999999999999999998642      379999999999876  47889999999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC--Ccccc--cccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--SADAK--ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--~~~~~--~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++++.|++++|||||+|+|| + .|.+.......  ...+.  .+..+|+|+|++++||+++.+.++||+++ +|+|..
T Consensus       181 ~~~la~el~~~gIrVn~v~Pg-~-~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        181 TLVAAAELGRYGVTVNAIAPA-A-RTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             HHHHHHHHHHhCeEEEEECCC-C-CCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence            999999999999999999999 3 44433211110  00111  13568999999999999998999999999 777665

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-40  Score=314.62  Aligned_cols=239  Identities=15%  Similarity=0.200  Sum_probs=193.8

Q ss_pred             cccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ..|+||+++||||++  |||+++|++|+++|++|++++|+. +       ..+..+++....+.+.++.+|++|++++++
T Consensus         2 ~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   73 (262)
T PRK07984          2 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-K-------LKGRVEEFAAQLGSDIVLPCDVAEDASIDA   73 (262)
T ss_pred             cccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-h-------HHHHHHHHHhccCCceEeecCCCCHHHHHH
Confidence            448899999999986  999999999999999999999873 2       123344554444556788999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.||++|+||||||+.......                                                    
T Consensus        74 ~~~~~~~~~g~iD~linnAg~~~~~~~~----------------------------------------------------  101 (262)
T PRK07984         74 MFAELGKVWPKFDGFVHSIGFAPGDQLD----------------------------------------------------  101 (262)
T ss_pred             HHHHHHhhcCCCCEEEECCccCCccccC----------------------------------------------------
Confidence            9999999999999999999975322111                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                        ..++.+.+.++|+.++++|+.+++.++++++|+|.+  .|+||++||..+..+  .+++..|++||+|+.+|+++++.
T Consensus       102 --~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~--~~~~~~Y~asKaal~~l~~~la~  175 (262)
T PRK07984        102 --GDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERA--IPNYNVMGLAKASLEANVRYMAN  175 (262)
T ss_pred             --CcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCC--CCCcchhHHHHHHHHHHHHHHHH
Confidence              001236788999999999999999999999997653  389999999988765  47888999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++|||||+|+||+ +.|++......        ....+..+..+|+|||++++||+++.++++||+.+ +|+|.
T Consensus       176 el~~~gIrVn~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        176 AMGPEGVRVNAISAGP-IRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HhcccCcEEeeeecCc-ccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            9999999999999996 55654322111        01124567789999999999999998999999999 66664

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-40  Score=314.11  Aligned_cols=241  Identities=19%  Similarity=0.215  Sum_probs=191.6

Q ss_pred             CcccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      |.+|++|+++||||  ++|||+++|++|+++|++|++++|.....        +..+++.+..+...++.+|++|+++++
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~Dv~d~~~v~   72 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK--------DRITEFAAEFGSDLVFPCDVASDEQID   72 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH--------HHHHHHHHhcCCcceeeccCCCHHHHH
Confidence            35688999999996  68999999999999999999987652211        112222222123356889999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+||||||+........                                                  
T Consensus        73 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~--------------------------------------------------  102 (260)
T PRK06997         73 ALFASLGQHWDGLDGLVHSIGFAPREAIAG--------------------------------------------------  102 (260)
T ss_pred             HHHHHHHHHhCCCcEEEEccccCCcccccc--------------------------------------------------
Confidence            999999999999999999999754321100                                                  


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          ..+.+.+.++|+.++++|+.++++++++++|+|.+  .|+||++||..+..+  .+++..|++||+|+.+|+++++
T Consensus       103 ----~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~--~~~~~~Y~asKaal~~l~~~la  174 (260)
T PRK06997        103 ----DFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERV--VPNYNTMGLAKASLEASVRYLA  174 (260)
T ss_pred             ----ccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccC--CCCcchHHHHHHHHHHHHHHHH
Confidence                00126788999999999999999999999999953  489999999988766  4778899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++|||||+|+||+ +.|++......        ....|..+..+|+|||++++||+++.+.++||+.+ +|+|..
T Consensus       175 ~el~~~gIrVn~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~  252 (260)
T PRK06997        175 VSLGPKGIRANGISAGP-IKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFN  252 (260)
T ss_pred             HHhcccCeEEEEEeeCc-cccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCChh
Confidence            99999999999999996 56654322111        00124567789999999999999999999999999 777754

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-40  Score=310.70  Aligned_cols=241  Identities=22%  Similarity=0.286  Sum_probs=203.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.+..      +.+..+++...+.++.++.+|++++++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   76 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG------LAETAEHIEAAGRRAIQIAADVTSKADLRAA   76 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchH------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            5678999999999999999999999999999999999976431      2344556666677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||+....+.                                                      
T Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~------------------------------------------------------  102 (254)
T PRK06114         77 VARTEAELGALTLAVNAAGIANANPA------------------------------------------------------  102 (254)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            99999999999999999997654332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.....+..|++||+|+++++++++.|
T Consensus       103 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e  177 (254)
T PRK06114        103 -----EEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAME  177 (254)
T ss_pred             -----HhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence                 278889999999999999999999999999988889999999998876542234689999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ ++|++......       ....+..+..+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       178 ~~~~gi~v~~v~PG~-i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        178 WVGRGIRVNSISPGY-TATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HhhcCeEEEEEeecC-ccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence            999999999999996 56654321100       01234567789999999999999999999999999 77664

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.7e-40  Score=312.63  Aligned_cols=238  Identities=28%  Similarity=0.418  Sum_probs=201.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|+||+++||||++|||+++|++|+++|++|++++|+ ++       +.+..+++.+.+.++.++.+|++++++++++
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   72 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA-------VSETVDKIKSNGGKAKAYHVDISDEQQVKDF   72 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH-------HHHHHHHHHhcCCeEEEEEeecCCHHHHHHH
Confidence            346889999999999999999999999999999999998 43       2345566666677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+......                                                      
T Consensus        73 ~~~~~~~~g~id~li~~Ag~~~~~~~------------------------------------------------------   98 (272)
T PRK08589         73 ASEIKEQFGRVDVLFNNAGVDNAAGR------------------------------------------------------   98 (272)
T ss_pred             HHHHHHHcCCcCEEEECCCCCCCCCC------------------------------------------------------
Confidence            99999999999999999997642211                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          +.+.+.+.|++++++|+.+++.++++++|+|++++ |+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus        99 ----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e  171 (272)
T PRK08589         99 ----IHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA--DLYRSGYNAAKGAVINFTKSIAIE  171 (272)
T ss_pred             ----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC--CCCCchHHHHHHHHHHHHHHHHHH
Confidence                12678899999999999999999999999998775 89999999998876  367789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      ++++||+||+|+||+ +.|++.+...+.              ...+..+..+|+|+|++++||+++.+.++||+.+ +|+
T Consensus       172 ~~~~gI~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdg  250 (272)
T PRK08589        172 YGRDGIRANAIAPGT-IETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDG  250 (272)
T ss_pred             hhhcCeEEEEEecCc-ccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC
Confidence            999999999999996 566654432211              0124456679999999999999998999999999 777


Q ss_pred             hHH
Q psy6113         309 EVL  311 (406)
Q Consensus       309 g~~  311 (406)
                      |..
T Consensus       251 g~~  253 (272)
T PRK08589        251 GVM  253 (272)
T ss_pred             Ccc
Confidence            654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-40  Score=313.45  Aligned_cols=240  Identities=18%  Similarity=0.207  Sum_probs=194.0

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ...|+||+++||||+  +|||+++|++|+++|++|++++|+...        .+..+++...-+....+++|++++++++
T Consensus         5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~--------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~   76 (272)
T PRK08159          5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL--------KKRVEPLAAELGAFVAGHCDVTDEASID   76 (272)
T ss_pred             cccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH--------HHHHHHHHHhcCCceEEecCCCCHHHHH
Confidence            456789999999997  899999999999999999999886321        1122222222123557899999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+||||||+.......                                                   
T Consensus        77 ~~~~~~~~~~g~iD~lv~nAG~~~~~~~~---------------------------------------------------  105 (272)
T PRK08159         77 AVFETLEKKWGKLDFVVHAIGFSDKDELT---------------------------------------------------  105 (272)
T ss_pred             HHHHHHHHhcCCCcEEEECCcccCccccc---------------------------------------------------
Confidence            99999999999999999999976431110                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          .++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+  .+++..|++||+|+.+|+++|+
T Consensus       106 ----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~--~p~~~~Y~asKaal~~l~~~la  177 (272)
T PRK08159        106 ----GRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKV--MPHYNVMGVAKAALEASVKYLA  177 (272)
T ss_pred             ----cCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccC--CCcchhhhhHHHHHHHHHHHHH
Confidence                12237889999999999999999999999999964  489999999888765  4788899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++|||||+|+||+ +.|.+.+.....        ...|..+..+|||+|++++||+++.+.++||+++ +|+|+.
T Consensus       178 ~el~~~gIrVn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        178 VDLGPKNIRVNAISAGP-IKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHhcccCeEEEEeecCC-cCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence            99999999999999996 566554322110        0134567789999999999999999999999999 777653

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.6e-40  Score=317.88  Aligned_cols=250  Identities=18%  Similarity=0.151  Sum_probs=192.2

Q ss_pred             cccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHH-HHHHH--HcCC---eeeeeeecC--
Q psy6113           5 GKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA-AKEVE--DAGG---NCLPCIVDI--   74 (406)
Q Consensus         5 ~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~-~~~~~--~~g~---~~~~~~~Dl--   74 (406)
                      ++|+||++|||||  ++|||+++|++|+++|++|++ +|+.++++++...+.+. .++..  ..+.   ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4699999999999  899999999999999999999 77777655432111110 00000  1111   146788898  


Q ss_pred             CC------------------hHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccch
Q psy6113          75 RD------------------EHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQG  136 (406)
Q Consensus        75 ~~------------------~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (406)
                      ++                  +++++++++++.+.||+||+||||||+....                             
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~-----------------------------  134 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEV-----------------------------  134 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccC-----------------------------
Confidence            43                  3489999999999999999999999864210                             


Q ss_pred             hhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCC
Q psy6113         137 LEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLN  216 (406)
Q Consensus       137 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~  216 (406)
                                                  ..++.+.+.++|++++++|+.+++.++|+++|+|+++  |+||++||..+..
T Consensus       135 ----------------------------~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~--G~II~isS~a~~~  184 (303)
T PLN02730        135 ----------------------------TKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPG--GASISLTYIASER  184 (303)
T ss_pred             ----------------------------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechhhcC
Confidence                                        0123488999999999999999999999999999764  8999999998887


Q ss_pred             CCccCCc-hhhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHH
Q psy6113         217 PFWFKNH-VAYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMA  286 (406)
Q Consensus       217 ~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA  286 (406)
                      +.  +++ ..|++||+|+.+|+++|+.|+++ +|||||+|+||+ +.|++.+....        ....+..+..+|+|+|
T Consensus       185 ~~--p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~-v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA  261 (303)
T PLN02730        185 II--PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGP-LGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVG  261 (303)
T ss_pred             CC--CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCC-ccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHH
Confidence            63  544 58999999999999999999986 899999999996 66766543211        0112445678999999


Q ss_pred             HHHHHhhcCCCCCccceEEEehhHHHHhccc
Q psy6113         287 DAAYYILSSNPPSLTGQFLIDDEVLKAQHID  317 (406)
Q Consensus       287 ~~v~~L~s~~~~~~tG~~i~d~g~~~~~~~~  317 (406)
                      ++++||+|+.++++||+.+..+|.+...|.+
T Consensus       262 ~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~  292 (303)
T PLN02730        262 NAAAFLASPLASAITGATIYVDNGLNAMGLA  292 (303)
T ss_pred             HHHHHHhCccccCccCCEEEECCCccccccC
Confidence            9999999999999999999444445555653

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-40  Score=310.19  Aligned_cols=241  Identities=28%  Similarity=0.385  Sum_probs=203.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+++++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++++++++++
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE-------LDQLVAEIRAEGGEAVALAGDVRDEAYAKAL   73 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            467899999999999999999999999999999999998764       3345566666677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.++++++|+||||||+......                                                      
T Consensus        74 ~~~~~~~~~~id~li~~ag~~~~~~~------------------------------------------------------   99 (254)
T PRK07478         74 VALAVERFGGLDIAFNNAGTLGEMGP------------------------------------------------------   99 (254)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCC------------------------------------------------------
Confidence            99999999999999999997543211                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          +.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+.... .+++..|++||+|+++++++++.|
T Consensus       100 ----~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e  174 (254)
T PRK07478        100 ----VAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG-FPGMAAYAASKAGLIGLTQVLAAE  174 (254)
T ss_pred             ----hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC-CCCcchhHHHHHHHHHHHHHHHHH
Confidence                127788999999999999999999999999999888999999998876321 467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++||+||+|+||+ +.|++.+......        ..+..+..+|+|+|+.++||+++.+.++||+.+ +|+|..
T Consensus       175 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~  250 (254)
T PRK07478        175 YGAQGIRVNALLPGG-TDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGVS  250 (254)
T ss_pred             HhhcCEEEEEEeeCc-ccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCchh
Confidence            999999999999996 5666543321110        123456779999999999999998999999998 776643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5e-40  Score=303.21  Aligned_cols=222  Identities=27%  Similarity=0.340  Sum_probs=195.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+.+++++|||||+|||+++|++|+++|++|++++|+.+++.       +.+++++. .+.++.++.+|+++++++.++
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~-------~la~~l~~~~~v~v~vi~~DLs~~~~~~~l   74 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLE-------ALAKELEDKTGVEVEVIPADLSDPEALERL   74 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHH-------HHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence            4568999999999999999999999999999999999998754       45666665 467899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      .+++.+.++.||+||||||+....++.                                                     
T Consensus        75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~-----------------------------------------------------  101 (265)
T COG0300          75 EDELKERGGPIDVLVNNAGFGTFGPFL-----------------------------------------------------  101 (265)
T ss_pred             HHHHHhcCCcccEEEECCCcCCccchh-----------------------------------------------------
Confidence            999999999999999999988665544                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.++++.++++++|+.++..++++++|.|.+++.|+||||+|.+++.|  .|..+.|++||+++.+|+++|..|
T Consensus       102 ------~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p--~p~~avY~ATKa~v~~fSeaL~~E  173 (265)
T COG0300         102 ------ELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP--TPYMAVYSATKAFVLSFSEALREE  173 (265)
T ss_pred             ------hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC--CcchHHHHHHHHHHHHHHHHHHHH
Confidence                  999999999999999999999999999999999999999999999988  488999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHh--cCCCcccccccCChhhHHHHHHHhhcC
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEML--TGGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~--~~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++++||+|.+|+||+ +.|++.+.-  ......+...+.+|+++|+.+++.+..
T Consensus       174 L~~~gV~V~~v~PG~-~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         174 LKGTGVKVTAVCPGP-TRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             hcCCCeEEEEEecCc-cccccccccccccccccchhhccCHHHHHHHHHHHHhc
Confidence            999999999999994 788776511  111122455678999999999998864

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=306.55  Aligned_cols=237  Identities=23%  Similarity=0.308  Sum_probs=200.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++       +..+++...  +.++.++.+|++|++++++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   76 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLA-------SAEARLREKFPGARLLAARCDVLDEADVAA   76 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-------HHHHHHHhhCCCceEEEEEecCCCHHHHHH
Confidence            4689999999999999999999999999999999999876532       344444443  3478889999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||.....+.                                                     
T Consensus        77 ~~~~~~~~~g~id~li~~Ag~~~~~~~-----------------------------------------------------  103 (265)
T PRK07062         77 FAAAVEARFGGVDMLVNNAGQGRVSTF-----------------------------------------------------  103 (265)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCh-----------------------------------------------------
Confidence            999999999999999999997644332                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            .+.+.++|.+.+++|+.+++.++++++|+|++++.|+||++||..+..+  .+++..|+++|+|+.+|+++++.
T Consensus       104 ------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~y~asKaal~~~~~~la~  175 (265)
T PRK07062        104 ------ADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP--EPHMVATSAARAGLLNLVKSLAT  175 (265)
T ss_pred             ------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC--CCCchHhHHHHHHHHHHHHHHHH
Confidence                  2788899999999999999999999999999988899999999998876  46788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHH-hc---C--------------CCcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEM-LT---G--------------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~-~~---~--------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      |++++||+||+|+||+ +.|++... +.   .              ....+..+..+|+|+|++++||+++.+.++||+.
T Consensus       176 e~~~~gi~v~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~  254 (265)
T PRK07062        176 ELAPKGVRVNSILLGL-VESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSH  254 (265)
T ss_pred             HhhhcCeEEEEEecCc-cccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccce
Confidence            9999999999999996 55554321 11   0              0112445678999999999999999899999999


Q ss_pred             E-EehhH
Q psy6113         305 L-IDDEV  310 (406)
Q Consensus       305 i-~d~g~  310 (406)
                      + +|+|.
T Consensus       255 i~vdgg~  261 (265)
T PRK07062        255 IDVSGGF  261 (265)
T ss_pred             EEEcCce
Confidence            9 66653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=306.43  Aligned_cols=245  Identities=22%  Similarity=0.267  Sum_probs=200.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +.+|+||+++||||++|||+++|++|+++|++|++++|+.+.      .++...+++.. .+.++.++.+|++|++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   76 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVE------EANKIAEDLEQKYGIKAKAYPLNILEPETYKE   76 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            457899999999999999999999999999999998764332      12233444443 35688999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+.......                                                    
T Consensus        77 ~~~~~~~~~g~id~lv~nAg~~~~~~~~----------------------------------------------------  104 (260)
T PRK08416         77 LFKKIDEDFDRVDFFISNAIISGRAVVG----------------------------------------------------  104 (260)
T ss_pred             HHHHHHHhcCCccEEEECcccccccccc----------------------------------------------------
Confidence            9999999999999999999975321100                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                       ...++.+.+.++|.+++++|+.+++.++++++|.|++.+.|+||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus       105 -~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~  181 (260)
T PRK08416        105 -GYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY--IENYAGHGTSKAAVETMVKYAAT  181 (260)
T ss_pred             -ccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC--CCCcccchhhHHHHHHHHHHHHH
Confidence             011233778899999999999999999999999999888899999999988765  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++|||||+|+||+ ++|++........        ..+..++.+|+|+|++++||+++.+.++||+.+ +|+|.
T Consensus       182 el~~~gi~v~~v~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        182 ELGEKNIRVNAVSGGP-IDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HhhhhCeEEEEEeeCc-ccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            9999999999999996 6676644332211        124456789999999999999998899999998 66653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-39  Score=304.84  Aligned_cols=238  Identities=18%  Similarity=0.215  Sum_probs=190.5

Q ss_pred             CcccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      |.+|++|+++||||  ++|||+++|++|+++|++|++++|+...  +   .+++..++   .+.++.++.+|++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~--~---~~~~~~~~---~~~~~~~~~~Dv~~~~~i~   73 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL--R---LTERIAKR---LPEPAPVLELDVTNEEHLA   73 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch--h---HHHHHHHh---cCCCCcEEeCCCCCHHHHH
Confidence            45789999999999  8999999999999999999999986421  0   01122222   2346778999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.+|++|+||||||+.......                                                   
T Consensus        74 ~~~~~~~~~~g~iD~li~nAG~~~~~~~~---------------------------------------------------  102 (256)
T PRK07889         74 SLADRVREHVDGLDGVVHSIGFAPQSALG---------------------------------------------------  102 (256)
T ss_pred             HHHHHHHHHcCCCcEEEEccccccccccC---------------------------------------------------
Confidence            99999999999999999999986321100                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          .++.+.++++|++++++|+.+++.++++++|+|++  .|+||++||.. ..+  .+.+..|++||+|+.+|+++|+
T Consensus       103 ----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~--~~~~~~Y~asKaal~~l~~~la  173 (256)
T PRK07889        103 ----GNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVA--WPAYDWMGVAKAALESTNRYLA  173 (256)
T ss_pred             ----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-ccc--CCccchhHHHHHHHHHHHHHHH
Confidence                12237788999999999999999999999999974  38999998754 222  3677889999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------ccccc-ccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKA-TSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~-~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .|++++|||||+|+||+ +.|++.+......        ..+.. ++.+|+|+|+.++||+++.+.++||+++ +|+|.
T Consensus       174 ~el~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        174 RDLGPRGIRVNLVAAGP-IRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             HHhhhcCeEEEeeccCc-ccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCce
Confidence            99999999999999996 6666654322110        11333 4689999999999999998999999999 66654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-39  Score=302.82  Aligned_cols=242  Identities=26%  Similarity=0.350  Sum_probs=205.1

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |...++|++|+++||||++|||+++|++|+++|++|++++|+.+++       .+..+++...+.++.++.+|+++++++
T Consensus         1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~~   73 (254)
T PRK08085          1 MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERA-------ELAVAKLRQEGIKAHAAPFNVTHKQEV   73 (254)
T ss_pred             CcccccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHH-------HHHHHHHHhcCCeEEEEecCCCCHHHH
Confidence            4456678999999999999999999999999999999999986542       344556666677888899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++.+.+.++++|++|||||.....+.                                                   
T Consensus        74 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~---------------------------------------------------  102 (254)
T PRK08085         74 EAAIEHIEKDIGPIDVLINNAGIQRRHPF---------------------------------------------------  102 (254)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCh---------------------------------------------------
Confidence            99999999999999999999997643332                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||++++++++++
T Consensus       103 --------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l  172 (254)
T PRK08085        103 --------TEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG--RDTITPYAASKGAVKMLTRGM  172 (254)
T ss_pred             --------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC--CCCCcchHHHHHHHHHHHHHH
Confidence                    2778899999999999999999999999998887899999999988766  367889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++||+||+|+||+ +.|++.......        ...+..++.+|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       173 a~e~~~~gi~v~~v~pG~-~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~~  251 (254)
T PRK08085        173 CVELARHNIQVNGIAPGY-FKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGML  251 (254)
T ss_pred             HHHHHhhCeEEEEEEeCC-CCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            999999999999999996 555443321110        1124567789999999999999999999999999 776643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=5.9e-39  Score=305.07  Aligned_cols=257  Identities=23%  Similarity=0.301  Sum_probs=208.7

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      -++.++++|+++||||++|||++++++|+++|++|++++|+.+..       ++..+++...+.++.++++|+++++++.
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   75 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKA-------EAVVAEIKAAGGEALAVKADVLDKESLE   75 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            345688999999999999999999999999999999999986542       3445566666778899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|++|||||...+.........                                            .-
T Consensus        76 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--------------------------------------------~~  111 (278)
T PRK08277         76 QARQQILEDFGPCDILINGAGGNHPKATTDNEFH--------------------------------------------EL  111 (278)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCcccccccccc--------------------------------------------cc
Confidence            9999999999999999999997543221100000                                            00


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                      .....++.+.+.++|+.++++|+.+++.++++++|.|++++.|+||++||..+..+  .++...|++||+|+++|+++++
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la  189 (278)
T PRK08277        112 IEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP--LTKVPAYSAAKAAISNFTQWLA  189 (278)
T ss_pred             cccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC--CCCCchhHHHHHHHHHHHHHHH
Confidence            01123445888999999999999999999999999999888899999999999876  4778899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhc-CC------------CcccccccCChhhHHHHHHHhhcC-CCCCccceEE-E
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLT-GG------------SADAKATSRKPEIMADAAYYILSS-NPPSLTGQFL-I  306 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~-~~------------~~~~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~~i-~  306 (406)
                      .|++++|||||+|+||+ +.|++.+... ..            ...+..++.+|+|+|++++||+++ .+.++||+.+ +
T Consensus       190 ~e~~~~girvn~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~v  268 (278)
T PRK08277        190 VHFAKVGIRVNAIAPGF-FLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPV  268 (278)
T ss_pred             HHhCccCeEEEEEEecc-CcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEE
Confidence            99999999999999996 5555433221 10            012456778999999999999998 8999999999 7


Q ss_pred             ehhHHH
Q psy6113         307 DDEVLK  312 (406)
Q Consensus       307 d~g~~~  312 (406)
                      |+|+..
T Consensus       269 dgG~~~  274 (278)
T PRK08277        269 DGGFSA  274 (278)
T ss_pred             CCCeec
Confidence            777553

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=4.6e-39  Score=301.82  Aligned_cols=237  Identities=26%  Similarity=0.335  Sum_probs=199.4

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +.++++||+++||||++|||+++|++|+++|++|++++|+..         .+..+++...+.++.++++|++|.+++++
T Consensus         4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~---------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   74 (253)
T PRK08993          4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP---------TETIEQVTALGRRFLSLTADLRKIDGIPA   74 (253)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch---------HHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            345789999999999999999999999999999998877532         12344555556788899999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|++|||||.......                                                     
T Consensus        75 ~~~~~~~~~~~~D~li~~Ag~~~~~~~-----------------------------------------------------  101 (253)
T PRK08993         75 LLERAVAEFGHIDILVNNAGLIRREDA-----------------------------------------------------  101 (253)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCc-----------------------------------------------------
Confidence            999999999999999999997543332                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                            .+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+.  ++...|++||+|+++++++++
T Consensus       102 ------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~Y~~sKaa~~~~~~~la  173 (253)
T PRK08993        102 ------IEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG--IRVPSYTASKSGVMGVTRLMA  173 (253)
T ss_pred             ------ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC--CCCcchHHHHHHHHHHHHHHH
Confidence                  2788899999999999999999999999998764 5899999999888763  677899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .|+.++||+||+|+||+ +.|++........        ..+..++.+|+|+|++++||+++.+++++|+++ +|+|.
T Consensus       174 ~e~~~~gi~v~~v~pG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        174 NEWAKHNINVNAIAPGY-MATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             HHhhhhCeEEEEEeeCc-ccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence            99999999999999996 5565543322111        123466789999999999999999999999998 76654

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-39  Score=301.47  Aligned_cols=233  Identities=24%  Similarity=0.291  Sum_probs=196.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.++++       +..+   ..+.++.++++|++++++++++
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~---~~~~~~~~~~~Dl~~~~~~~~~   70 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGA-------AVAA---SLGERARFIATDITDDAAIERA   70 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHH---HhCCeeEEEEecCCCHHHHHHH
Confidence            34688999999999999999999999999999999999865422       2222   2356788999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||...... .                                                     
T Consensus        71 ~~~~~~~~g~id~lv~~ag~~~~~~-~-----------------------------------------------------   96 (261)
T PRK08265         71 VATVVARFGRVDILVNLACTYLDDG-L-----------------------------------------------------   96 (261)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCc-C-----------------------------------------------------
Confidence            9999999999999999999754321 1                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.+++.++++++|+|+ ++.|+||++||..+..+  .+++..|++||+++.+++++++.|
T Consensus        97 ------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e  167 (261)
T PRK08265         97 ------ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFA--QTGRWLYPASKAAIRQLTRSMAMD  167 (261)
T ss_pred             ------cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccC--CCCCchhHHHHHHHHHHHHHHHHH
Confidence                  567889999999999999999999999998 56699999999998876  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+.....          ...+..+..+|+|+|++++||+++.+.++||+.+ +|+|.
T Consensus       168 ~~~~gi~vn~v~PG~-~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        168 LAPDGIRVNSVSPGW-TWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             hcccCEEEEEEccCC-ccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence            999999999999996 566554432211          0124456779999999999999998999999998 77664

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.1e-38  Score=300.34  Aligned_cols=227  Identities=25%  Similarity=0.361  Sum_probs=194.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|+||+++||||++|||+++|++|+++|++|++++|+.+..                  .++.++++|++++++++++
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------------~~~~~~~~D~~~~~~i~~~   62 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------------NDVDYFKVDVSNKEQVIKG   62 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------------CceEEEEccCCCHHHHHHH
Confidence            3468999999999999999999999999999999999986531                  1477899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+.                                                      
T Consensus        63 ~~~~~~~~~~id~li~~Ag~~~~~~~------------------------------------------------------   88 (258)
T PRK06398         63 IDYVISKYGRIDILVNNAGIESYGAI------------------------------------------------------   88 (258)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCc------------------------------------------------------
Confidence            99999999999999999998543332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .+++..|++||+|+++++++++.|
T Consensus        89 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sKaal~~~~~~la~e  161 (258)
T PRK06398         89 -----HAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV--TRNAAAYVTSKHAVLGLTRSIAVD  161 (258)
T ss_pred             -----ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC--CCCCchhhhhHHHHHHHHHHHHHH
Confidence                 3788999999999999999999999999999888899999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC-----C------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG-----G------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~-----~------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      +++. |+||+|+||+ +.|++......     .            ...+..+..+|+|+|++++||+++.+.++||+++ 
T Consensus       162 ~~~~-i~vn~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~  239 (258)
T PRK06398        162 YAPT-IRCVAVCPGS-IRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVT  239 (258)
T ss_pred             hCCC-CEEEEEecCC-ccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEE
Confidence            9876 9999999996 56665433210     0            0123456679999999999999998999999999 


Q ss_pred             EehhHH
Q psy6113         306 IDDEVL  311 (406)
Q Consensus       306 ~d~g~~  311 (406)
                      +|+|..
T Consensus       240 ~dgg~~  245 (258)
T PRK06398        240 VDGGLR  245 (258)
T ss_pred             ECCccc
Confidence            676653

>KOG1205|consensus

Probab=100.00  E-value=3.4e-39  Score=299.86  Aligned_cols=228  Identities=30%  Similarity=0.381  Sum_probs=186.9

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-C-eeeeeeecCCChHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-G-NCLPCIVDIRDEHAV   80 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~-~~~~~~~Dl~~~~~v   80 (406)
                      ++.++.||||+|||||+|||+++|.+|+++|++++++.|+.++++       ...+++++.+ . ++.+++||++|.+++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~-------~v~~~l~~~~~~~~v~~~~~Dvs~~~~~   78 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLE-------RVAEELRKLGSLEKVLVLQLDVSDEESV   78 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHH-------HHHHHHHHhCCcCccEEEeCccCCHHHH
Confidence            567899999999999999999999999999999999999888754       3445555543 2 489999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++.+..+||++|+||||||+.. ..+.                                                  
T Consensus        79 ~~~~~~~~~~fg~vDvLVNNAG~~~-~~~~--------------------------------------------------  107 (282)
T KOG1205|consen   79 KKFVEWAIRHFGRVDVLVNNAGISL-VGFL--------------------------------------------------  107 (282)
T ss_pred             HHHHHHHHHhcCCCCEEEecCcccc-cccc--------------------------------------------------
Confidence            9999999999999999999999987 3332                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              .+.+.+++..+|++|++|+.+++++++|+|++++.|+||++||++|..+.  |..+.|++||+|+.+|..+|
T Consensus       108 --------~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~--P~~~~Y~ASK~Al~~f~etL  177 (282)
T KOG1205|consen  108 --------EDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL--PFRSIYSASKHALEGFFETL  177 (282)
T ss_pred             --------ccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC--CcccccchHHHHHHHHHHHH
Confidence                    27888999999999999999999999999999999999999999999884  66779999999999999999


Q ss_pred             HHhhcCCC--eEEEEecchhhhhHHHHH-HhcCCCc-ccccccCChhhHHH--HHHHhhcCCCCCc
Q psy6113         241 AEEFKGDN--IAVNALWPRTAIYTAAIE-MLTGGSA-DAKATSRKPEIMAD--AAYYILSSNPPSL  300 (406)
Q Consensus       241 a~e~~~~g--I~vn~v~PG~~~~t~~~~-~~~~~~~-~~~~~~~~pe~vA~--~v~~L~s~~~~~~  300 (406)
                      +.|+.+.+  |++ +|+||+ ++|.+.. ....... ........+++++.  .+.+....+....
T Consensus       178 R~El~~~~~~i~i-~V~PG~-V~Te~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  241 (282)
T KOG1205|consen  178 RQELIPLGTIIII-LVSPGP-IETEFTGKELLGEEGKSQQGPFLRTEDVADPEAVAYAISTPPCRQ  241 (282)
T ss_pred             HHHhhccCceEEE-EEecCc-eeecccchhhccccccccccchhhhhhhhhHHHHHHHHhcCcccc
Confidence            99999987  666 999996 6775433 3322222 22234455666655  6666665544433

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-38  Score=297.03  Aligned_cols=237  Identities=27%  Similarity=0.360  Sum_probs=201.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|+||+++||||++|||+++|++|+++|++|++++|+ ++       .++..+.+...+.++.++.+|+++.++++++
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   81 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TN-------WDETRRLIEKEGRKVTFVQVDLTKPESAEKV   81 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cH-------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            457899999999999999999999999999999999997 32       2234455555677889999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+..                                                     
T Consensus        82 ~~~~~~~~g~id~li~~ag~~~~~~~~-----------------------------------------------------  108 (258)
T PRK06935         82 VKEALEEFGKIDILVNNAGTIRRAPLL-----------------------------------------------------  108 (258)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcc-----------------------------------------------------
Confidence            999999999999999999976433322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+  .+++..|++||+|++++++++++|
T Consensus       109 ------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  180 (258)
T PRK06935        109 ------EYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG--GKFVPAYTASKHGVAGLTKAFANE  180 (258)
T ss_pred             ------cCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC--CCCchhhHHHHHHHHHHHHHHHHH
Confidence                  778889999999999999999999999999988899999999988866  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ +.|++.+......        ..+..++.+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       181 ~~~~gi~v~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        181 LAAYNIQVNAIAPGY-IKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             hhhhCeEEEEEEecc-ccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            999999999999996 5555433221110        123467789999999999999999999999999 66664

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.2e-38  Score=294.73  Aligned_cols=245  Identities=23%  Similarity=0.255  Sum_probs=200.5

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCC----CCcccHHHHHHHHHHcCCeeeeeeecCCCh
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHP----KLPGTIYSAAKEVEDAGGNCLPCIVDIRDE   77 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~----~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~   77 (406)
                      |.+|+||+++||||+  +|||+++|++|+++|++|++++|+.....    .......+..+++.+.+.++.++++|+++.
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   80 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN   80 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            357999999999999  49999999999999999999875421110    001122344556667788899999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      ++++++++++.+.+|++|++|||||.....+.                                                
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~------------------------------------------------  112 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDF------------------------------------------------  112 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh------------------------------------------------
Confidence            99999999999999999999999997543332                                                


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                                 .+.+.++|+.++++|+.+++.++++++|.|.+++.|+||++||..+..+  .+++..|++||+++.+|+
T Consensus       113 -----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~l~  179 (256)
T PRK12859        113 -----------SNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP--MVGELAYAATKGAIDALT  179 (256)
T ss_pred             -----------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC--CCCchHHHHHHHHHHHHH
Confidence                       2788999999999999999999999999999887899999999998876  478899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHH-HHhcC--CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAI-EMLTG--GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~-~~~~~--~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++.|++++||+||+|+||+ +.|++. +....  ....+..+..+|+|+|+.++||+++.+.++||+++ +|+|.
T Consensus       180 ~~la~~~~~~~i~v~~v~PG~-i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        180 SSLAAEVAHLGITVNAINPGP-TDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHhhhhCeEEEEEEEcc-ccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            999999999999999999996 455321 11100  01124456779999999999999998999999999 77663

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-38  Score=294.95  Aligned_cols=233  Identities=27%  Similarity=0.395  Sum_probs=192.0

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEec-CCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK-TAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r-~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +++|+++||||++|||+++|++|+++|++|++.++ +.+.       +.+...++...+.++..+.+|+++.+++..+++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-------AEETVYEIQSNGGSAFSIGANLESLHGVEALYS   74 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHH-------HHHHHHHHHhcCCceEEEecccCCHHHHHHHHH
Confidence            46899999999999999999999999999998754 3332       234455666667778889999999999999999


Q ss_pred             HHHHh----cC--CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          86 AAVDK----FG--GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        86 ~i~~~----~g--~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      ++.+.    ++  ++|+||||||+......                                                  
T Consensus        75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~--------------------------------------------------  104 (252)
T PRK12747         75 SLDNELQNRTGSTKFDILINNAGIGPGAFI--------------------------------------------------  104 (252)
T ss_pred             HHHHHhhhhcCCCCCCEEEECCCcCCCCCc--------------------------------------------------
Confidence            88763    34  89999999997533222                                                  


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                               .+.+.++|++++++|+.+++.++++++|.|++.  |+||++||..+..+  .+++..|++||+|+++++++
T Consensus       105 ---------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~  171 (252)
T PRK12747        105 ---------EETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRIS--LPDFIAYSMTKGAINTMTFT  171 (252)
T ss_pred             ---------ccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccC--CCCchhHHHHHHHHHHHHHH
Confidence                     278889999999999999999999999999764  89999999999876  47788999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++.|++++|||||+|+||+ +.|++.+......        ..+..++.+|+|+|++++||+++.++++||+.+ +|+|.
T Consensus       172 la~e~~~~girvn~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        172 LAKQLGARGITVNAILPGF-IKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHhHcCCEEEEEecCC-ccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            9999999999999999996 5666544322111        113456789999999999999998999999998 66653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-38  Score=296.69  Aligned_cols=233  Identities=19%  Similarity=0.266  Sum_probs=193.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||++|||+++|++|+++|++|++++|+.+.+       ++..+++...+ ++.++++|++|+++++++++++.+.
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~   73 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENL-------EKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWEL   73 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHh
Confidence            699999999999999999999999999999986542       33455555443 6788999999999999999999999


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                      ++++|+||||||.......                                                         ++.+
T Consensus        74 ~g~id~li~naG~~~~~~~---------------------------------------------------------~~~~   96 (259)
T PRK08340         74 LGGIDALVWNAGNVRCEPC---------------------------------------------------------MLHE   96 (259)
T ss_pred             cCCCCEEEECCCCCCCCcc---------------------------------------------------------cccc
Confidence            9999999999997532110                                                         1237


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHh-cCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKK-SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      .+.++|...+++|+.+++.+++.++|.|.+ ++.|+||++||..+..+  .++...|++||+|+.+|+++++.|++++||
T Consensus        97 ~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~gI  174 (259)
T PRK08340         97 AGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP--MPPLVLADVTRAGLVQLAKGVSRTYGGKGI  174 (259)
T ss_pred             ccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC--CCCchHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            788899999999999999999999999874 56789999999998876  477889999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHH-hc--------C---------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         250 AVNALWPRTAIYTAAIEM-LT--------G---------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~-~~--------~---------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |||+|+||+ ++|++.+. ..        .         ....|..+..+|+|||++++||++++++++||+.+ +|+|.
T Consensus       175 ~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        175 RAYTVLLGS-FDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             EEEEeccCc-ccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            999999996 55554321 10        0         01124567789999999999999999999999998 77764


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       254 ~  254 (259)
T PRK08340        254 T  254 (259)
T ss_pred             C
Confidence            3

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.2e-39  Score=306.38  Aligned_cols=254  Identities=17%  Similarity=0.160  Sum_probs=183.6

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHH--H-HHHHHHcCC-----eeeeeeec
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYS--A-AKEVEDAGG-----NCLPCIVD   73 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~--~-~~~~~~~g~-----~~~~~~~D   73 (406)
                      +.+|+||+++|||++  +|||+++|+.|+++|++|++.+|.+ .+.......+.  . .......+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            467899999999996  9999999999999999999987642 00000000000  0 000000011     11112223


Q ss_pred             CCCh------------------HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccc
Q psy6113          74 IRDE------------------HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQ  135 (406)
Q Consensus        74 l~~~------------------~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (406)
                      +++.                  ++++++++++.++||++|+||||||.....                            
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~----------------------------  133 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEI----------------------------  133 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCccc----------------------------
Confidence            3332                  468999999999999999999999864210                            


Q ss_pred             hhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC
Q psy6113         136 GLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL  215 (406)
Q Consensus       136 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~  215 (406)
                                                   ..++.+++.++|++++++|+.|+++++++++|+|+++  |+||+++|..+.
T Consensus       134 -----------------------------~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~--G~ii~iss~~~~  182 (299)
T PRK06300        134 -----------------------------SKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPG--GSTISLTYLASM  182 (299)
T ss_pred             -----------------------------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CeEEEEeehhhc
Confidence                                         1123488999999999999999999999999999764  799999999887


Q ss_pred             CCCccCCch-hhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhH
Q psy6113         216 NPFWFKNHV-AYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIM  285 (406)
Q Consensus       216 ~~~~~~~~~-~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~v  285 (406)
                      .+.  +++. .|++||+|+.+|+++|+.|+++ +|||||+|+||+ +.|++.......        ...+..+..+|+|+
T Consensus       183 ~~~--p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peev  259 (299)
T PRK06300        183 RAV--PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGP-LASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQV  259 (299)
T ss_pred             CcC--CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCC-ccChhhhcccccHHHHHHHHhcCCCCCCcCHHHH
Confidence            763  5554 8999999999999999999987 599999999996 566554322100        11244567899999


Q ss_pred             HHHHHHhhcCCCCCccceEE-EehhHHHHhcccccCc
Q psy6113         286 ADAAYYILSSNPPSLTGQFL-IDDEVLKAQHIDLEQY  321 (406)
Q Consensus       286 A~~v~~L~s~~~~~~tG~~i-~d~g~~~~~~~~~~~~  321 (406)
                      |++++||+++.+.++||+.+ +|+| ....|++.+.|
T Consensus       260 A~~v~~L~s~~~~~itG~~i~vdGG-~~~~~~~~~~~  295 (299)
T PRK06300        260 GAAAAFLVSPLASAITGETLYVDHG-ANVMGIGPEMF  295 (299)
T ss_pred             HHHHHHHhCccccCCCCCEEEECCC-cceecCCcCcc
Confidence            99999999999999999999 5555 44566544333

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8.2e-38  Score=299.83  Aligned_cols=239  Identities=24%  Similarity=0.342  Sum_probs=197.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.++++|+++||||++|||+++|++|+++|++|++.+|+.+..     ..++..+.+...+.++.++.+|+++.+++.++
T Consensus        44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  118 (294)
T PRK07985         44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEE-----DAQDVKKIIEECGRKAVLLPGDLSDEKFARSL  118 (294)
T ss_pred             CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchh-----hHHHHHHHHHHcCCeEEEEEccCCCHHHHHHH
Confidence            4468999999999999999999999999999999988764321     12334444555677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||......                                                       
T Consensus       119 ~~~~~~~~g~id~lv~~Ag~~~~~~-------------------------------------------------------  143 (294)
T PRK07985        119 VHEAHKALGGLDIMALVAGKQVAIP-------------------------------------------------------  143 (294)
T ss_pred             HHHHHHHhCCCCEEEECCCCCcCCC-------------------------------------------------------
Confidence            9999999999999999999643211                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+.+.++|++++++|+.+++.++++++|+|++.  ++||++||..+..+  .+++.+|++||+|+++++++++.|
T Consensus       144 ---~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~iv~iSS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e  216 (294)
T PRK07985        144 ---DIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITTSSIQAYQP--SPHLLDYAATKAAILNYSRGLAKQ  216 (294)
T ss_pred             ---ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--CEEEEECCchhccC--CCCcchhHHHHHHHHHHHHHHHHH
Confidence               12378899999999999999999999999999753  89999999998876  477889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc-C-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT-G-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~-~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ +.|++..... .       ....+..+..+|+|+|++++||+++.+.++||+.+ +|+|.
T Consensus       217 l~~~gIrvn~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        217 VAEKGIRVNIVAPGP-IWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HhHhCcEEEEEECCc-CccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            999999999999996 5665421110 0       01124456789999999999999999999999999 66653

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=5e-39  Score=299.41  Aligned_cols=226  Identities=31%  Similarity=0.452  Sum_probs=189.7

Q ss_pred             cCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHHHHhc-
Q psy6113          16 GAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAVDKF-   91 (406)
Q Consensus        16 Gas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~-   91 (406)
                      |++  +|||+++|++|+++|++|++++|+.+++       ....+++.. .+.+  ++.+|++++++++++++++.+.+ 
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~-------~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKL-------ADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHH-------HHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHH-------HHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcC
Confidence            666  9999999999999999999999998742       223344443 3444  59999999999999999999999 


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                      |+||+||||+|.......                                                       ..++.+.
T Consensus        72 g~iD~lV~~a~~~~~~~~-------------------------------------------------------~~~~~~~   96 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNV-------------------------------------------------------EKPLLDL   96 (241)
T ss_dssp             SSESEEEEEEESCTGGGT-------------------------------------------------------SSSGGGS
T ss_pred             CCeEEEEecccccccccC-------------------------------------------------------CCChHhC
Confidence            999999999997654211                                                       1233478


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC-CCeE
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG-DNIA  250 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~-~gI~  250 (406)
                      +.++|+..+++|+.+++.++|+++|+|.++  |+||++||..+..+  .+++..|+++|+|+++|+|++|.||++ +|||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~--~~~~~~y~~sKaal~~l~r~lA~el~~~~gIr  172 (241)
T PF13561_consen   97 SEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRP--MPGYSAYSASKAALEGLTRSLAKELAPKKGIR  172 (241)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSB--STTTHHHHHHHHHHHHHHHHHHHHHGGHGTEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhccc--CccchhhHHHHHHHHHHHHHHHHHhccccCee
Confidence            899999999999999999999999988886  89999999988877  578889999999999999999999999 9999


Q ss_pred             EEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         251 VNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       251 vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||+|+||+ +.|++.+.....        ...|..+..+|+|||++++||+|+.++++||+.| +|||+
T Consensus       173 VN~V~pG~-i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  173 VNAVSPGP-IETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             EEEEEESS-BSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             eeeecccc-eeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence            99999996 556555444321        1235677789999999999999999999999999 77775

...

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-38  Score=296.65  Aligned_cols=242  Identities=27%  Similarity=0.276  Sum_probs=199.7

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |-+.++|++|+++||||++|||++++++|+++|++|++++|+.++..                ..++.++.+|+++++++
T Consensus         1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   64 (266)
T PRK06171          1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------------HENYQFVPTDVSSAEEV   64 (266)
T ss_pred             CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------------cCceEEEEccCCCHHHH
Confidence            55667899999999999999999999999999999999999876532                13577889999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|++|||||........+..                                               
T Consensus        65 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~-----------------------------------------------   97 (266)
T PRK06171         65 NHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEK-----------------------------------------------   97 (266)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccCCccccccc-----------------------------------------------
Confidence            999999999999999999999976433221000                                               


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                         ...++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .+++..|++||+|+++|++++
T Consensus        98 ---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~l  172 (266)
T PRK06171         98 ---DPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG--SEGQSCYAATKAALNSFTRSW  172 (266)
T ss_pred             ---cccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC--CCCCchhHHHHHHHHHHHHHH
Confidence               011223688999999999999999999999999999888899999999998876  467899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHH--------------------HhcCCCcccccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIE--------------------MLTGGSADAKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~--------------------~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      +.|++++||+||+|+||++.+|.+..                    .+......|..+..+|+|||+++.||+++.++++
T Consensus       173 a~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~i  252 (266)
T PRK06171        173 AKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYI  252 (266)
T ss_pred             HHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccc
Confidence            99999999999999999653333211                    0000002355677899999999999999999999


Q ss_pred             cceEE-EehhH
Q psy6113         301 TGQFL-IDDEV  310 (406)
Q Consensus       301 tG~~i-~d~g~  310 (406)
                      ||+.+ +|+|.
T Consensus       253 tG~~i~vdgg~  263 (266)
T PRK06171        253 TGVTTNIAGGK  263 (266)
T ss_pred             eeeEEEecCcc
Confidence            99999 66664

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-37  Score=292.26  Aligned_cols=234  Identities=28%  Similarity=0.397  Sum_probs=194.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+.          ..+++...  .+.++.+|+++++++++++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~----------~~~~l~~~--~~~~~~~Dl~~~~~~~~~~   70 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN----------EAKELREK--GVFTIKCDVGNRDQVKKSK   70 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH----------HHHHHHhC--CCeEEEecCCCHHHHHHHH
Confidence            46889999999999999999999999999999988776532          22333332  4678899999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|+||||||+....+.                                                       
T Consensus        71 ~~~~~~~~~id~li~~ag~~~~~~~-------------------------------------------------------   95 (255)
T PRK06463         71 EVVEKEFGRVDVLVNNAGIMYLMPF-------------------------------------------------------   95 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCh-------------------------------------------------------
Confidence            9999999999999999997643222                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+..+. .++...|++||+|+++|+++++.|+
T Consensus        96 ----~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-~~~~~~Y~asKaa~~~~~~~la~e~  170 (255)
T PRK06463         96 ----EEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA-AEGTTFYAITKAGIIILTRRLAFEL  170 (255)
T ss_pred             ----hhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC-CCCccHhHHHHHHHHHHHHHHHHHh
Confidence                26788999999999999999999999999998878999999998877432 3567889999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++||+||+|+||+ +.|++.......           ...+..+..+|+|+|+.++||+++.+.++||+.+ +|+|..
T Consensus       171 ~~~~i~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        171 GKYGIRVNAVAPGW-VETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             hhcCeEEEEEeeCC-CCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence            99999999999996 566554321111           0123456679999999999999988899999999 777655

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=291.26  Aligned_cols=240  Identities=27%  Similarity=0.353  Sum_probs=203.1

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++++|++|+++||||++|||++++++|+++|++|++++|+.++       ++...+++...+.++.++++|+++.+++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (252)
T PRK07035          2 NLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG-------CQAVADAIVAAGGKAEALACHIGEMEQIDA   74 (252)
T ss_pred             CccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            4567999999999999999999999999999999999997654       234556666667778899999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|++|||||......                                                      
T Consensus        75 ~~~~~~~~~~~id~li~~ag~~~~~~------------------------------------------------------  100 (252)
T PRK07035         75 LFAHIRERHGRLDILVNNAAANPYFG------------------------------------------------------  100 (252)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCC------------------------------------------------------
Confidence            99999999999999999999643211                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                          ++.+.+.++|+..+++|+.+++.++++++|+|++.+.++||++||..+..+  .+++..|++||+++++++++++.
T Consensus       101 ----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~al~~~~~~l~~  174 (252)
T PRK07035        101 ----HILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP--GDFQGIYSITKAAVISMTKAFAK  174 (252)
T ss_pred             ----CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC--CCCCcchHHHHHHHHHHHHHHHH
Confidence                112778899999999999999999999999999888899999999988876  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |+.++||+||+|+||+ +.|++.+......        ..+..+..+|+|+|+.++||+++.+.+++|+++ +|+|.
T Consensus       175 e~~~~gi~v~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        175 ECAPFGIRVNALLPGL-TDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGGY  250 (252)
T ss_pred             HHhhcCEEEEEEeecc-ccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            9999999999999996 5665543221110        123456789999999999999999999999999 66654

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=290.30  Aligned_cols=238  Identities=25%  Similarity=0.342  Sum_probs=204.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|++|+++||||++|||++++++|+++|++|++++|+.++.       .+..+++...+.++.++.+|+++.+++.+++
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   75 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG-------EETVALIREAGGEALFVACDVTRDAEVKALV   75 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            568999999999999999999999999999999999987643       2345566666778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.......                                                       
T Consensus        76 ~~~~~~~g~id~li~~ag~~~~~~~-------------------------------------------------------  100 (253)
T PRK06172         76 EQTIAAYGRLDYAFNNAGIEIEQGR-------------------------------------------------------  100 (253)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999997543221                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                         +.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+  .+++..|++||+|+++|+++++.|+
T Consensus       101 ---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~  175 (253)
T PRK06172        101 ---LAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA--APKMSIYAASKHAVIGLTKSAAIEY  175 (253)
T ss_pred             ---hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC--CCCCchhHHHHHHHHHHHHHHHHHh
Confidence               12778899999999999999999999999999888899999999998876  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .++||+||+|+||+ +.|++.+......         ..+..+..+|+|+|+.++||+++.+.++||+++ +|+|.
T Consensus       176 ~~~~i~v~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        176 AKKGIRVNAVCPAV-IDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             cccCeEEEEEEeCC-ccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            99999999999996 5666655432211         123456679999999999999998999999999 77765

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-37  Score=297.20  Aligned_cols=238  Identities=26%  Similarity=0.370  Sum_probs=197.8

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +..+|+||+++||||++|||+++|++|+++|++|++++|+...      ..++..+++...+.++.++.+|+++.+++++
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~------~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~   79 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASAL------DASDVLDEIRAAGAKAVAVAGDISQRATADE   79 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchh------HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            4568999999999999999999999999999999999886432      1334566677778899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+ +|++|+||||||+.....+.                                                    
T Consensus        80 ~~~~~~~-~g~iD~li~nAG~~~~~~~~----------------------------------------------------  106 (306)
T PRK07792         80 LVATAVG-LGGLDIVVNNAGITRDRMLF----------------------------------------------------  106 (306)
T ss_pred             HHHHHHH-hCCCCEEEECCCCCCCCCcc----------------------------------------------------
Confidence            9999999 99999999999986543332                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-------CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-------NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-------~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~  235 (406)
                             +.+.++|+.++++|+.++++++++++|+|+++       ..|+||++||..+..+  .+++..|++||+|+++
T Consensus       107 -------~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~  177 (306)
T PRK07792        107 -------NMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG--PVGQANYGAAKAGITA  177 (306)
T ss_pred             -------cCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC--CCCCchHHHHHHHHHH
Confidence                   78889999999999999999999999999764       1479999999988876  3678899999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCc---ccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSA---DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~---~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |+++++.|++++||+||+|+|| . .|.+.........   .......+|+++|+.+.||+++.+.++||+++ +++|.
T Consensus       178 l~~~la~e~~~~gI~vn~i~Pg-~-~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        178 LTLSAARALGRYGVRANAICPR-A-RTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             HHHHHHHHhhhcCeEEEEECCC-C-CCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence            9999999999999999999999 3 4544433221111   11123458999999999999998889999998 66554

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=290.57  Aligned_cols=238  Identities=24%  Similarity=0.332  Sum_probs=203.1

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++.+|+||+++||||++|||+++|++|+++|++|++.+|+.++       +.+..+.+...+.++.++.+|+++++++++
T Consensus         4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~   76 (255)
T PRK07523          4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK-------LAAAAESLKGQGLSAHALAFDVTDHDAVRA   76 (255)
T ss_pred             cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHHHHHhcCceEEEEEccCCCHHHHHH
Confidence            3567899999999999999999999999999999999998654       233455566667789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|++|||||.....+.                                                     
T Consensus        77 ~~~~~~~~~~~~d~li~~ag~~~~~~~-----------------------------------------------------  103 (255)
T PRK07523         77 AIDAFEAEIGPIDILVNNAGMQFRTPL-----------------------------------------------------  103 (255)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCh-----------------------------------------------------
Confidence            999999999999999999997654332                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            .+.+.++|++++++|+.+++++++++.|+|.+++.++||++||..+..+  .+++..|+++|++++.++++++.
T Consensus       104 ------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~y~~sK~a~~~~~~~~a~  175 (255)
T PRK07523        104 ------EDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA--RPGIAPYTATKGAVGNLTKGMAT  175 (255)
T ss_pred             ------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC--CCCCccHHHHHHHHHHHHHHHHH
Confidence                  2788999999999999999999999999999888899999999988766  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |++++||+||+|+||+ +.|++.......        ...+..++..|+|+|++++||+++.+.++||+.+ +|+|
T Consensus       176 e~~~~gi~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg  250 (255)
T PRK07523        176 DWAKHGLQCNAIAPGY-FDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGG  250 (255)
T ss_pred             HhhHhCeEEEEEEECc-ccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            9999999999999996 556554322111        1124456789999999999999998999999998 6665

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.7e-37  Score=289.82  Aligned_cols=234  Identities=29%  Similarity=0.402  Sum_probs=197.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|+||+++||||++|||+++|++|+++|++|++++|+..         .+..+.+...+.++.++.+|+++++++.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~---------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP---------SETQQQVEALGRRFLSLTADLSDIEAIKALVD   72 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH---------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            588999999999999999999999999999999998642         12344555567788999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|++|||||.....+..                                                       
T Consensus        73 ~~~~~~~~~d~li~~ag~~~~~~~~-------------------------------------------------------   97 (248)
T TIGR01832        73 SAVEEFGHIDILVNNAGIIRRADAE-------------------------------------------------------   97 (248)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChh-------------------------------------------------------
Confidence            9999999999999999986543322                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          +.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+  .++...|++||+++++++++++.|+
T Consensus        98 ----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~  171 (248)
T TIGR01832        98 ----EFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG--GIRVPSYTASKHGVAGLTKLLANEW  171 (248)
T ss_pred             ----hCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC--CCCCchhHHHHHHHHHHHHHHHHHh
Confidence                778889999999999999999999999998775 689999999988766  3567899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.+.+++|+++ +|+|.
T Consensus       172 ~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       172 AAKGINVNAIAPGY-MATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             CccCcEEEEEEECc-CcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCCE
Confidence            99999999999996 555543322111        0123456789999999999999998999999998 77664

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-38  Score=294.97  Aligned_cols=234  Identities=25%  Similarity=0.316  Sum_probs=190.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+.+++|+++||||++|||+++|++|+++|++|++++|+.++++       +..   ...+.++.++++|++++++++++
T Consensus         1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~---~~~~~~~~~~~~D~~~~~~~~~~   70 (263)
T PRK06200          1 MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLA-------SLR---QRFGDHVLVVEGDVTSYADNQRA   70 (263)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHH---HHhCCcceEEEccCCCHHHHHHH
Confidence            35688999999999999999999999999999999999865421       222   22345688899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+.......                                                     
T Consensus        71 ~~~~~~~~g~id~li~~ag~~~~~~~~-----------------------------------------------------   97 (263)
T PRK06200         71 VDQTVDAFGKLDCFVGNAGIWDYNTSL-----------------------------------------------------   97 (263)
T ss_pred             HHHHHHhcCCCCEEEECCCCcccCCCc-----------------------------------------------------
Confidence            999999999999999999975422111                                                     


Q ss_pred             ccCCCCCCchh----hHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         164 SLTDTANTPLK----KYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       164 ~~~~~~~~~~~----~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                           .+.+.+    .|++++++|+.+++.++++++|.|++++ |+||++||..+..+  .++...|++||+|+++|+++
T Consensus        98 -----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~  169 (263)
T PRK06200         98 -----VDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYP--GGGGPLYTASKHAVVGLVRQ  169 (263)
T ss_pred             -----ccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCC--CCCCchhHHHHHHHHHHHHH
Confidence                 134444    3899999999999999999999988764 89999999998876  36778999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHh---------c--C------CCcccccccCChhhHHHHHHHhhcCC-CCCcc
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEML---------T--G------GSADAKATSRKPEIMADAAYYILSSN-PPSLT  301 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~---------~--~------~~~~~~~~~~~pe~vA~~v~~L~s~~-~~~~t  301 (406)
                      ++.|+++. ||||+|+||+ +.|++....         .  +      ....|..+..+|+|+|++++||+++. ++++|
T Consensus       170 la~el~~~-Irvn~i~PG~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~it  247 (263)
T PRK06200        170 LAYELAPK-IRVNGVAPGG-TVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALT  247 (263)
T ss_pred             HHHHHhcC-cEEEEEeCCc-cccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCccc
Confidence            99999885 9999999996 555542110         0  0      00124567789999999999999988 99999


Q ss_pred             ceEE-EehhH
Q psy6113         302 GQFL-IDDEV  310 (406)
Q Consensus       302 G~~i-~d~g~  310 (406)
                      |+.+ +|+|+
T Consensus       248 G~~i~vdgG~  257 (263)
T PRK06200        248 GVVINADGGL  257 (263)
T ss_pred             ceEEEEcCce
Confidence            9999 77664

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=291.88  Aligned_cols=244  Identities=29%  Similarity=0.368  Sum_probs=205.6

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      |..++++|+++||||++|||+++|++|+++|++|++++|+.++       +.+..+++...+.++.++++|+++.+++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   76 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQEL-------VDKGLAAYRELGIEAHGYVCDVTDEDGVQA   76 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH-------HHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            3457889999999999999999999999999999999888654       234455566667789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+....+..                                                    
T Consensus        77 ~~~~~~~~~~~id~li~~ag~~~~~~~~----------------------------------------------------  104 (265)
T PRK07097         77 MVSQIEKEVGVIDILVNNAGIIKRIPML----------------------------------------------------  104 (265)
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCcc----------------------------------------------------
Confidence            9999999999999999999986543332                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.+++.+++.++|+|++++.++||++||..+..+  .+++..|+++|+++++++++++.
T Consensus       105 -------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sKaal~~l~~~la~  175 (265)
T PRK07097        105 -------EMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG--RETVSAYAAAKGGLKMLTKNIAS  175 (265)
T ss_pred             -------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC--CCCCccHHHHHHHHHHHHHHHHH
Confidence                   788899999999999999999999999999888899999999988766  36788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC-----C---------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG-----G---------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~-----~---------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      |+.++||+||+|+||+ +.|++......     .         ...+..++.+|+|+|++++||+++.+.+++|+.+ +|
T Consensus       176 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  254 (265)
T PRK07097        176 EYGEANIQCNGIGPGY-IATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVD  254 (265)
T ss_pred             HhhhcCceEEEEEecc-ccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEEC
Confidence            9999999999999996 55544322211     0         0113346778999999999999998899999998 78


Q ss_pred             hhHHHHhc
Q psy6113         308 DEVLKAQH  315 (406)
Q Consensus       308 ~g~~~~~~  315 (406)
                      +|.+.+.|
T Consensus       255 gg~~~~~~  262 (265)
T PRK07097        255 GGILAYIG  262 (265)
T ss_pred             CCceeccC
Confidence            77665443

>KOG1201|consensus

Probab=100.00  E-value=2e-37  Score=285.26  Aligned_cols=217  Identities=23%  Similarity=0.321  Sum_probs=193.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+.+|++||||||++||||++|++|+++|+++++.|.+.+..       +++++++++.| ++..+.||+++.+++.+..
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~-------~etv~~~~~~g-~~~~y~cdis~~eei~~~a  105 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN-------EETVKEIRKIG-EAKAYTCDISDREEIYRLA  105 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch-------HHHHHHHHhcC-ceeEEEecCCCHHHHHHHH
Confidence            468899999999999999999999999999999999998863       46778887775 8999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++++.+|.+|+||||||+.......                                                      
T Consensus       106 ~~Vk~e~G~V~ILVNNAGI~~~~~ll------------------------------------------------------  131 (300)
T KOG1201|consen  106 KKVKKEVGDVDILVNNAGIVTGKKLL------------------------------------------------------  131 (300)
T ss_pred             HHHHHhcCCceEEEeccccccCCCcc------------------------------------------------------
Confidence            99999999999999999998776665                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.+++++++++|+.|+|+++|+++|.|.+.+.|+||+++|.+|..+  .++...|++||+|+.+|.++|..|+
T Consensus       132 -----~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g--~~gl~~YcaSK~a~vGfhesL~~EL  204 (300)
T KOG1201|consen  132 -----DCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG--PAGLADYCASKFAAVGFHESLSMEL  204 (300)
T ss_pred             -----CCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC--CccchhhhhhHHHHHHHHHHHHHHH
Confidence                 899999999999999999999999999999999999999999999988  4899999999999999999999998


Q ss_pred             c---CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhh
Q psy6113         245 K---GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYIL  293 (406)
Q Consensus       245 ~---~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~  293 (406)
                      .   .+||+...|+|++ +.|.|.+.  ..+.....+..+|+++|+.++.-+
T Consensus       205 ~~~~~~~IktTlv~P~~-i~Tgmf~~--~~~~~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  205 RALGKDGIKTTLVCPYF-INTGMFDG--ATPFPTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             HhcCCCCeeEEEEeeee-ccccccCC--CCCCccccCCCCHHHHHHHHHHHH
Confidence            6   4679999999996 55755554  222234556789999999998766

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.2e-37  Score=296.67  Aligned_cols=238  Identities=25%  Similarity=0.371  Sum_probs=198.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++.+|+.+..     ..++..+.++..+.++.++.+|+++.++++++
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQ-----DAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchH-----HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence            3468899999999999999999999999999999988765421     12344556666778899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||......                                                       
T Consensus       125 ~~~~~~~~g~iD~lV~nAg~~~~~~-------------------------------------------------------  149 (300)
T PRK06128        125 VERAVKELGGLDILVNIAGKQTAVK-------------------------------------------------------  149 (300)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCC-------------------------------------------------------
Confidence            9999999999999999999753221                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+.+.++|++++++|+.++++++++++|+|.+  .++||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       150 ---~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  222 (300)
T PRK06128        150 ---DIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQP--SPTLLDYASTKAAIVAFTKALAKQ  222 (300)
T ss_pred             ---ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence               1237889999999999999999999999999975  379999999998876  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc-C-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT-G-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~-~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +.++||+||+|+||+ +.|++..... .       ....+..+..+|+|+|.+++||+++.+.++||+.+ +|+|
T Consensus       223 l~~~gI~v~~v~PG~-i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        223 VAEKGIRVNAVAPGP-VWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG  296 (300)
T ss_pred             hhhcCcEEEEEEECc-CcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCC
Confidence            999999999999996 5555422100 0       01234567789999999999999998999999998 6665

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=287.21  Aligned_cols=230  Identities=24%  Similarity=0.315  Sum_probs=195.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.++               ...+.++.++++|++++++++++
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---------------~~~~~~~~~~~~D~~~~~~~~~~   65 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------------TVDGRPAEFHAADVRDPDQVAAL   65 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---------------hhcCCceEEEEccCCCHHHHHHH
Confidence            357899999999999999999999999999999999998642               12245688899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|++|||||+......                                                      
T Consensus        66 ~~~~~~~~~~id~vi~~ag~~~~~~~------------------------------------------------------   91 (252)
T PRK07856         66 VDAIVERHGRLDVLVNNAGGSPYALA------------------------------------------------------   91 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCc------------------------------------------------------
Confidence            99999999999999999997643322                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+.+.++|++++++|+.+++.+++++.|+|.++ +.|+||++||..+..+  .+++..|++||+++++|+++++.
T Consensus        92 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~  164 (252)
T PRK07856         92 -----AEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP--SPGTAAYGAAKAGLLNLTRSLAV  164 (252)
T ss_pred             -----ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC--CCCCchhHHHHHHHHHHHHHHHH
Confidence                 277889999999999999999999999999875 4589999999998876  47789999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++ |+||+|+||+ +.|++........        ..+..+..+|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       165 e~~~~-i~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~  240 (252)
T PRK07856        165 EWAPK-VRVNAVVVGL-VRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGGE  240 (252)
T ss_pred             HhcCC-eEEEEEEecc-ccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence            99988 9999999996 5665543221111        123456789999999999999998899999999 777654

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-37  Score=287.50  Aligned_cols=235  Identities=24%  Similarity=0.356  Sum_probs=194.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|++|+++||||++|||+++|++|+++|++|++++|+..        ..+..+++...+.++.++.+|+++.++++++
T Consensus         3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (260)
T PRK12823          3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL--------VHEVAAELRAAGGEALALTADLETYAGAQAA   74 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH--------HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHH
Confidence            35689999999999999999999999999999999999742        1234555666677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||......                                                       
T Consensus        75 ~~~~~~~~~~id~lv~nAg~~~~~~-------------------------------------------------------   99 (260)
T PRK12823         75 MAAAVEAFGRIDVLINNVGGTIWAK-------------------------------------------------------   99 (260)
T ss_pred             HHHHHHHcCCCeEEEECCccccCCC-------------------------------------------------------
Confidence            9999999999999999999642111                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+.+.++|+..+++|+.+++.+++.++|+|++++.++||++||..+..    ++..+|++||+|+++|+++++.|
T Consensus       100 ---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~Y~~sK~a~~~~~~~la~e  172 (260)
T PRK12823        100 ---PFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG----INRVPYSAAKGGVNALTASLAFE  172 (260)
T ss_pred             ---ChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC----CCCCccHHHHHHHHHHHHHHHHH
Confidence               12378889999999999999999999999999988889999999987652    34568999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHh------cCC-------------CcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEML------TGG-------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~------~~~-------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      ++++||+||+|+||+ +.|++....      ...             ...+..+..+|+|+|++++||+++.+.++||+.
T Consensus       173 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~  251 (260)
T PRK12823        173 YAEHGIRVNAVAPGG-TEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTV  251 (260)
T ss_pred             hcccCcEEEEEecCc-cCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcE
Confidence            999999999999996 555432110      000             012445677999999999999999889999998


Q ss_pred             E-Eehh
Q psy6113         305 L-IDDE  309 (406)
Q Consensus       305 i-~d~g  309 (406)
                      + +|+|
T Consensus       252 ~~v~gg  257 (260)
T PRK12823        252 LPVGGG  257 (260)
T ss_pred             EeecCC
Confidence            8 6665

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.2e-37  Score=293.73  Aligned_cols=234  Identities=23%  Similarity=0.296  Sum_probs=188.2

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +|++|+++||||++|||+++|++|+++|++|++++|+.+.+           +++. ..+.++.++.+|+++.+++.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----------~~l~~~~~~~~~~~~~D~~~~~~~~~~~   70 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL-----------QELEAAHGDAVVGVEGDVRSLDDHKEAV   70 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----------HHHHhhcCCceEEEEeccCCHHHHHHHH
Confidence            57899999999999999999999999999999999976532           1222 23557888999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCC-CCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTD-TANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+.++++|+||||||+..... ..+.+                                                  
T Consensus        71 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~--------------------------------------------------  100 (262)
T TIGR03325        71 ARCVAAFGKIDCLIPNAGIWDYSTALVDIP--------------------------------------------------  100 (262)
T ss_pred             HHHHHHhCCCCEEEECCCCCccCCccccCC--------------------------------------------------
Confidence            999999999999999999753221 11000                                                  


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+...++|++++++|+.+++.++++++|+|.+++ |+||+++|..+..+  .++...|++||+|+++|+++++.|
T Consensus       101 -----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~l~~~la~e  172 (262)
T TIGR03325       101 -----DDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYP--NGGGPLYTAAKHAVVGLVKELAFE  172 (262)
T ss_pred             -----chhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecC--CCCCchhHHHHHHHHHHHHHHHHh
Confidence                 0122357999999999999999999999998765 89999999988876  367789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHh----cCC------------CcccccccCChhhHHHHHHHhhcCC-CCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEML----TGG------------SADAKATSRKPEIMADAAYYILSSN-PPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~----~~~------------~~~~~~~~~~pe~vA~~v~~L~s~~-~~~~tG~~i-  305 (406)
                      ++++ ||||+|+||+ +.|++....    ...            ...|..+..+|+|+|++++||+++. +.++||+.+ 
T Consensus       173 ~~~~-irvn~i~PG~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~  250 (262)
T TIGR03325       173 LAPY-VRVNGVAPGG-MSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLN  250 (262)
T ss_pred             hccC-eEEEEEecCC-CcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEE
Confidence            9987 9999999996 556543210    000            0124567789999999999999974 578999999 


Q ss_pred             EehhH
Q psy6113         306 IDDEV  310 (406)
Q Consensus       306 ~d~g~  310 (406)
                      +|+|+
T Consensus       251 vdgg~  255 (262)
T TIGR03325       251 YDGGM  255 (262)
T ss_pred             ecCCe
Confidence            77664

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=285.73  Aligned_cols=233  Identities=22%  Similarity=0.290  Sum_probs=193.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++|++|+++|||+++|||+++|++|+++|++|++++|+.++.       ++..+++... +.++.++.+|++++++++++
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   75 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL-------EALAADLRAAHGVDVAVHALDLSSPEAREQL   75 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence            468999999999999999999999999999999999987642       2344445443 56788999999999999888


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++    ++++|++|||||.....+.                                                      
T Consensus        76 ~~~----~g~id~lv~~ag~~~~~~~------------------------------------------------------   97 (259)
T PRK06125         76 AAE----AGDIDILVNNAGAIPGGGL------------------------------------------------------   97 (259)
T ss_pred             HHH----hCCCCEEEECCCCCCCCCc------------------------------------------------------
Confidence            753    5899999999997643332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|+.++++|+.++++++++++|.|++++.|+||++||..+..+  .+++..|+++|+|+++|+++++.|
T Consensus        98 -----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~y~ask~al~~~~~~la~e  170 (259)
T PRK06125         98 -----DDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP--DADYICGSAGNAALMAFTRALGGK  170 (259)
T ss_pred             -----ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC--CCCchHhHHHHHHHHHHHHHHHHH
Confidence                 3788999999999999999999999999999887899999999988766  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc--------CC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-E
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT--------GG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-I  306 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~--------~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~  306 (406)
                      +.++|||||+|+||+ +.|++.....        ..        ...+..++.+|+|+|++++||+++.++++||+++ +
T Consensus       171 ~~~~gi~v~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~v  249 (259)
T PRK06125        171 SLDDGVRVVGVNPGP-VATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTV  249 (259)
T ss_pred             hCccCeEEEEEecCc-cccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEe
Confidence            999999999999996 5555432211        00        0123456779999999999999998999999999 7


Q ss_pred             ehhH
Q psy6113         307 DDEV  310 (406)
Q Consensus       307 d~g~  310 (406)
                      |+|.
T Consensus       250 dgg~  253 (259)
T PRK06125        250 DGGI  253 (259)
T ss_pred             cCCe
Confidence            7663

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.7e-37  Score=291.24  Aligned_cols=240  Identities=24%  Similarity=0.288  Sum_probs=195.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+..       .+..+++. .+.++.++++|++|+++++++
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~   84 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG-------QNVCDSLG-GEPNVCFFHCDVTVEDDVSRA   84 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHhc-CCCceEEEEeecCCHHHHHHH
Confidence            3568899999999999999999999999999999999876532       22333332 245788999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|+||||||......                                                       
T Consensus        85 ~~~~~~~~g~id~li~~Ag~~~~~~-------------------------------------------------------  109 (280)
T PLN02253         85 VDFTVDKFGTLDIMVNNAGLTGPPC-------------------------------------------------------  109 (280)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCC-------------------------------------------------------
Confidence            9999999999999999999754211                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                        .++.+.+.++|+.++++|+.++++++++++|+|.+++.|+||++||..+..+.  ++...|++||+|+++++++++.|
T Consensus       110 --~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e  185 (280)
T PLN02253        110 --PDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG--LGPHAYTGSKHAVLGLTRSVAAE  185 (280)
T ss_pred             --CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC--CCCcccHHHHHHHHHHHHHHHHH
Confidence              01237889999999999999999999999999988778999999999887663  56778999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHH-HhcCCC---------------ccc-ccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIE-MLTGGS---------------ADA-KATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~-~~~~~~---------------~~~-~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      ++++||+||+|+||++ .|++.. ..+...               ..+ ..+..+|+|+|++++||+++.+.+++|+.+ 
T Consensus       186 ~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~  264 (280)
T PLN02253        186 LGKHGIRVNCVSPYAV-PTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLM  264 (280)
T ss_pred             hhhcCeEEEEEeeCcc-cccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEE
Confidence            9999999999999964 443321 111100               001 123468999999999999998999999998 


Q ss_pred             EehhHH
Q psy6113         306 IDDEVL  311 (406)
Q Consensus       306 ~d~g~~  311 (406)
                      +|+|..
T Consensus       265 vdgG~~  270 (280)
T PLN02253        265 IDGGFT  270 (280)
T ss_pred             ECCchh
Confidence            777653

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=287.04  Aligned_cols=234  Identities=24%  Similarity=0.359  Sum_probs=196.0

Q ss_pred             ccCCcEEEEecCCc-hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cC-CeeeeeeecCCChHHHHH
Q psy6113           6 KLSGLTIFITGASR-GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AG-GNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         6 ~l~gk~alVTGas~-GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g-~~~~~~~~Dl~~~~~v~~   82 (406)
                      .+++|+++||||++ |||+++++.|+++|++|++++|+.+++       ++..++++. .+ .++.++++|+++++++++
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   86 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL-------GETADELAAELGLGRVEAVVCDVTSEAQVDA   86 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHHHHhcCCceEEEEEccCCCHHHHHH
Confidence            46789999999984 999999999999999999999886542       334444544 33 468889999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||.......                                                     
T Consensus        87 ~~~~~~~~~g~id~li~~ag~~~~~~~-----------------------------------------------------  113 (262)
T PRK07831         87 LIDAAVERLGRLDVLVNNAGLGGQTPV-----------------------------------------------------  113 (262)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCc-----------------------------------------------------
Confidence            999999999999999999997543322                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                            .+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+  .+++..|++||+|+++++++++
T Consensus       114 ------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~--~~~~~~Y~~sKaal~~~~~~la  185 (262)
T PRK07831        114 ------VDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA--QHGQAHYAAAKAGVMALTRCSA  185 (262)
T ss_pred             ------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC--CCCCcchHHHHHHHHHHHHHHH
Confidence                  2788899999999999999999999999999876 799999999988766  3678899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      .|++++|||||+|+||+ +.|++.+.....       ...+..+..+|+|+|++++||+++.+.++||+++ +|+
T Consensus       186 ~e~~~~gI~v~~i~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        186 LEAAEYGVRINAVAPSI-AMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHhCccCeEEEEEeeCC-ccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            99999999999999995 556543321110       1124567789999999999999999999999999 554

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=284.93  Aligned_cols=234  Identities=27%  Similarity=0.378  Sum_probs=193.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      ||+++||||++|||++++++|+++|++|++++|+.+++       ++..+++...+.++.++.+|++++++++++++++.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL-------EEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQID   73 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999986542       33445555556788899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||.....+                                                           +
T Consensus        74 ~~~~~id~lI~~ag~~~~~~-----------------------------------------------------------~   94 (252)
T PRK07677         74 EKFGRIDALINNAAGNFICP-----------------------------------------------------------A   94 (252)
T ss_pred             HHhCCccEEEECCCCCCCCC-----------------------------------------------------------c
Confidence            99999999999999643222                                                           2


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC-
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG-  246 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~-  246 (406)
                      .+.+.++|++++++|+.++++++++++|+|.++ ..|+||++||..+..+  .+++.+|++||+|+++|+++|+.|+++ 
T Consensus        95 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~  172 (252)
T PRK07677         95 EDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA--GPGVIHSAAAKAGVLAMTRTLAVEWGRK  172 (252)
T ss_pred             ccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC--CCCCcchHHHHHHHHHHHHHHHHHhCcc
Confidence            378899999999999999999999999999765 3689999999988765  367789999999999999999999974 


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +||+||+|+||++.++.+.......        ...+..++.+|+|+|+++.||+++.+.++||+.+ +|+|.
T Consensus       173 ~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        173 YGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             cCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence            7999999999975434322111110        0123456789999999999999988889999998 66654

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.8e-36  Score=284.33  Aligned_cols=233  Identities=24%  Similarity=0.355  Sum_probs=196.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||++++++|+++|++|++++|+.+..       ++...++...+.++.++.+|++++++++++++++.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA-------QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVV   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            78999999999999999999999999999999986542       23455566566788899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      ++++++|++|||||+....+.                                                           
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~-----------------------------------------------------------   95 (256)
T PRK08643         75 DTFGDLNVVVNNAGVAPTTPI-----------------------------------------------------------   95 (256)
T ss_pred             HHcCCCCEEEECCCCCCCCCc-----------------------------------------------------------
Confidence            999999999999997543332                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                      .+.+.++|+.++++|+.+++.+++.+++.|++.+ .++||++||..+..+  .++...|++||++++.+++.++.|+.++
T Consensus        96 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~  173 (256)
T PRK08643         96 ETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG--NPELAVYSSTKFAVRGLTQTAARDLASE  173 (256)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC--CCCCchhHHHHHHHHHHHHHHHHHhccc
Confidence            2778899999999999999999999999998764 479999999988876  4678899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcC--------CC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTG--------GS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~--------~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ||+||+|+||+ +.|++......        ..         ..+..++.+|+|+|++++||+++.+.++||+.+ +|+|
T Consensus       174 gi~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        174 GITVNAYAPGI-VKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             CcEEEEEeeCC-CcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            99999999996 55655432210        00         113445678999999999999999999999999 6665


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      .
T Consensus       253 ~  253 (256)
T PRK08643        253 M  253 (256)
T ss_pred             e
Confidence            3

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-37  Score=286.89  Aligned_cols=235  Identities=21%  Similarity=0.277  Sum_probs=195.8

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.+..+++||+++||||++|||++++++|+++|++|++++|+.+..                ...++.++.+|+++++++
T Consensus         1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~~~D~~~~~~~   64 (260)
T PRK06523          1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------------LPEGVEFVAADLTTAEGC   64 (260)
T ss_pred             CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------------cCCceeEEecCCCCHHHH
Confidence            5566789999999999999999999999999999999999986421                134577899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|++|||||......                                                    
T Consensus        65 ~~~~~~~~~~~~~id~vi~~ag~~~~~~----------------------------------------------------   92 (260)
T PRK06523         65 AAVARAVLERLGGVDILVHVLGGSSAPA----------------------------------------------------   92 (260)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccCC----------------------------------------------------
Confidence            9999999999999999999999653211                                                    


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                           .++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+. ..++..|++||+++++|++++
T Consensus        93 -----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-~~~~~~Y~~sK~a~~~l~~~~  166 (260)
T PRK06523         93 -----GGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL-PESTTAYAAAKAALSTYSKSL  166 (260)
T ss_pred             -----CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-CCCcchhHHHHHHHHHHHHHH
Confidence                 11236788999999999999999999999999998888999999999887663 136789999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcC--------C------------CcccccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTG--------G------------SADAKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      +.|++++||+||+|+||+ +.|++......        .            ...+..+..+|+|+|++++||+++.++++
T Consensus       167 a~~~~~~gi~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~  245 (260)
T PRK06523        167 SKEVAPKGVRVNTVSPGW-IETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASI  245 (260)
T ss_pred             HHHHhhcCcEEEEEecCc-ccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccc
Confidence            999999999999999996 55544321100        0            01234566799999999999999989999


Q ss_pred             cceEE-EehhH
Q psy6113         301 TGQFL-IDDEV  310 (406)
Q Consensus       301 tG~~i-~d~g~  310 (406)
                      ||+.+ +|+|.
T Consensus       246 ~G~~~~vdgg~  256 (260)
T PRK06523        246 TGTEYVIDGGT  256 (260)
T ss_pred             cCceEEecCCc
Confidence            99988 77654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.8e-36  Score=284.45  Aligned_cols=238  Identities=28%  Similarity=0.400  Sum_probs=200.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..       ++...++...+.++.++.+|+++.++++++
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   78 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA-------NHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            4567899999999999999999999999999999999986542       234555566677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|++|||||.....+ .                                                     
T Consensus        79 ~~~~~~~~~~~d~li~~ag~~~~~~-~-----------------------------------------------------  104 (255)
T PRK06113         79 ADFALSKLGKVDILVNNAGGGGPKP-F-----------------------------------------------------  104 (255)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCC-C-----------------------------------------------------
Confidence            9999999999999999999754321 1                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+..+++|+.+++.++++++|+|.+.+.++||++||..+..+  .+++..|++||+|+++|+++++.+
T Consensus       105 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~  176 (255)
T PRK06113        105 ------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK--NINMTSYASSKAAASHLVRNMAFD  176 (255)
T ss_pred             ------CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC--CCCcchhHHHHHHHHHHHHHHHHH
Confidence                  567889999999999999999999999998877789999999998876  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.++|||||+|+||+ +.|++.+.....       ...+..++.+|+|++++++||+++.+.++||+.+ +|+|..
T Consensus       177 ~~~~~i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        177 LGEKNIRVNGIAPGA-ILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             hhhhCeEEEEEeccc-ccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence            999999999999996 555443221100       1123456789999999999999998999999999 777643

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-36  Score=283.99  Aligned_cols=238  Identities=29%  Similarity=0.382  Sum_probs=198.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|++|+++||||++|||+++|++|+++|++|++++|+.+.        .+..+++...+.++.++.+|++++++++++
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~--------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   72 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI--------EKLADELCGRGHRCTAVVADVRDPASVAAA   72 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH--------HHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence            456889999999999999999999999999999999997531        223444555567788999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+..                                                     
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~-----------------------------------------------------   99 (263)
T PRK08226         73 IKRAKEKEGRIDILVNNAGVCRLGSFL-----------------------------------------------------   99 (263)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcc-----------------------------------------------------
Confidence            999999999999999999976443322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|++++++|+.+++.++++++|+|.+.+.++||++||..+. .+  .+++..|+++|+++++++++++.
T Consensus       100 ------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~  171 (263)
T PRK08226        100 ------DMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA--DPGETAYALTKAAIVGLTKSLAV  171 (263)
T ss_pred             ------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC--CCCcchHHHHHHHHHHHHHHHHH
Confidence                  7778899999999999999999999999988777899999998774 33  36778999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC----CC----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG----GS----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~----~~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      |++++||+||+|+||+ +.|++.+....    ..          ..|..++.+|+|+|+.++||+++.+.++||+.+ +|
T Consensus       172 ~~~~~~i~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~d  250 (263)
T PRK08226        172 EYAQSGIRVNAICPGY-VRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVID  250 (263)
T ss_pred             HhcccCcEEEEEecCc-ccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeEC
Confidence            9999999999999996 66665443211    00          113445679999999999999998999999998 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      +|..
T Consensus       251 gg~~  254 (263)
T PRK08226        251 GGST  254 (263)
T ss_pred             CCcc
Confidence            7654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=284.64  Aligned_cols=238  Identities=28%  Similarity=0.422  Sum_probs=199.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++++|+++||||++|||+++|++|+++|++|++++|+...      ......+++...+.++.++.+|+++.+++++++
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~   76 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEE------EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLI   76 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Confidence            36899999999999999999999999999999998886532      123445566666778889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.....+..                                                      
T Consensus        77 ~~~~~~~g~id~lv~~ag~~~~~~~~------------------------------------------------------  102 (261)
T PRK08936         77 QTAVKEFGTLDVMINNAGIENAVPSH------------------------------------------------------  102 (261)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChh------------------------------------------------------
Confidence            99999999999999999976543322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+  .+++..|++||+|+.+++++++.|
T Consensus       103 -----~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e  175 (261)
T PRK08936        103 -----EMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP--WPLFVHYAASKGGVKLMTETLAME  175 (261)
T ss_pred             -----hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC--CCCCcccHHHHHHHHHHHHHHHHH
Confidence                 778899999999999999999999999998865 589999999988776  477889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.++||+||+|+||+ ++|++.+.....        ...+..+..+|+|+|+.++||+++.+.++||+.+ +|+|.
T Consensus       176 ~~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        176 YAPKGIRVNNIGPGA-INTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HhhcCeEEEEEEECc-CCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCc
Confidence            999999999999996 555543211111        0123456779999999999999999999999988 66653

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=279.22  Aligned_cols=221  Identities=18%  Similarity=0.205  Sum_probs=184.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++..+.+|+++++++++++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~-------l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~   73 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSA-------LKDTYEQCSALTDNVYSFQLKDFSQESIRHLF   73 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHH
Confidence            36889999999999999999999999999999999998765       33455666666778888999999999999999


Q ss_pred             HHHHHhcC-CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKFG-GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~g-~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+++| +||++|||||......                                                       
T Consensus        74 ~~~~~~~g~~iD~li~nag~~~~~~-------------------------------------------------------   98 (227)
T PRK08862         74 DAIEQQFNRAPDVLVNNWTSSPLPS-------------------------------------------------------   98 (227)
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCC-------------------------------------------------------
Confidence            99999999 9999999998643221                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                         ++.+.++++|.+.+++|+.+++.+++.++|+|++++ .|+||++||..+.     +++..|++||+|+.+|+++|+.
T Consensus        99 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----~~~~~Y~asKaal~~~~~~la~  170 (227)
T PRK08862         99 ---LFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----QDLTGVESSNALVSGFTHSWAK  170 (227)
T ss_pred             ---ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----CCcchhHHHHHHHHHHHHHHHH
Confidence               123788899999999999999999999999998764 6899999997654     4567899999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCCh-hhHHHHHHHhhcCCCCCccceEEE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKP-EIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~p-e~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      |++++|||||+|+||+ +.|..  ..     .+ .++... +|++.++.||++  +.++||+.+.
T Consensus       171 el~~~~Irvn~v~PG~-i~t~~--~~-----~~-~~~~~~~~~~~~~~~~l~~--~~~~tg~~~~  224 (227)
T PRK08862        171 ELTPFNIRVGGVVPSI-FSANG--EL-----DA-VHWAEIQDELIRNTEYIVA--NEYFSGRVVE  224 (227)
T ss_pred             HHhhcCcEEEEEecCc-CcCCC--cc-----CH-HHHHHHHHHHHhheeEEEe--cccccceEEe
Confidence            9999999999999996 55531  00     00 011112 899999999997  6799999873

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.2e-36  Score=281.00  Aligned_cols=241  Identities=25%  Similarity=0.330  Sum_probs=192.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |.+++|+++||||++|||+++|++|+++|++|+++.++.+.      ..+..   ....+.++.++.+|+++++++++++
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~------~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~   71 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSED------AAEAL---ADELGDRAIALQADVTDREQVQAMF   71 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHH------HHHHH---HHHhCCceEEEEcCCCCHHHHHHHH
Confidence            45789999999999999999999999999999987664331      01111   2223457888999999999999999


Q ss_pred             HHHHHhcCC-ccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~g~-iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+.+++ +|++|||||+.......                                                     
T Consensus        72 ~~~~~~~g~~id~li~~ag~~~~~~~~-----------------------------------------------------   98 (253)
T PRK08642         72 ATATEHFGKPITTVVNNALADFSFDGD-----------------------------------------------------   98 (253)
T ss_pred             HHHHHHhCCCCeEEEECCCcccccccc-----------------------------------------------------
Confidence            999999987 99999999864321100                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                      ...++.+.+.++|++++++|+.+++.++++++|+|.+++.++||++||..+..+  ..++..|++||+|+++++++++++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~~  176 (253)
T PRK08642         99 ARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP--VVPYHDYTTAKAALLGLTRNLAAE  176 (253)
T ss_pred             CCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC--CCCccchHHHHHHHHHHHHHHHHH
Confidence            011234788999999999999999999999999998887899999999876654  356779999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||++ .|+........       ...+..++.+|+|+|++++||+++.+.++||+.+ +|+|.
T Consensus       177 ~~~~~i~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        177 LGPYGITVNMVSGGLL-RTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             hCccCeEEEEEeeccc-CCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            9999999999999964 44322211110       1124466789999999999999998899999999 67664

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-36  Score=282.35  Aligned_cols=241  Identities=26%  Similarity=0.382  Sum_probs=200.1

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |-.|+++++|+++||||++|||++++++|+++|++|++++|+.+.+       ....+++...+.++.++.+|+++++++
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~i   73 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV-------DAAVAQLQQAGPEGLGVSADVRDYAAV   73 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHHhCCceEEEECCCCCHHHH
Confidence            4557899999999999999999999999999999999999986542       234445555566778899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|++|||||.......                                                   
T Consensus        74 ~~~~~~~~~~~~~iD~vi~~ag~~~~~~~---------------------------------------------------  102 (264)
T PRK07576         74 EAAFAQIADEFGPIDVLVSGAAGNFPAPA---------------------------------------------------  102 (264)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCcc---------------------------------------------------
Confidence            99999999999999999999986533222                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              .+.+.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+  .+++..|++||+++++|++++
T Consensus       103 --------~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~--~~~~~~Y~asK~a~~~l~~~l  171 (264)
T PRK07576        103 --------AGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVP--MPMQAHVCAAKAGVDMLTRTL  171 (264)
T ss_pred             --------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccC--CCCccHHHHHHHHHHHHHHHH
Confidence                    2778889999999999999999999999997664 89999999988765  477889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.|+.++||+||+|+||++.++.......+.        ...+..+..+|+|+|+.++||+++.+.+++|+++ +|+|.
T Consensus       172 a~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        172 ALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence            9999999999999999975445432221111        0123455678999999999999988889999998 66664

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.3e-36  Score=278.52  Aligned_cols=224  Identities=21%  Similarity=0.287  Sum_probs=184.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||+++|++|+++|++|++++|+.++          ..+.+...+  +.++.+|++++++++++++++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~   69 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP----------AIDGLRQAG--AQCIQADFSTNAGIMAFIDELK   69 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh----------HHHHHHHcC--CEEEEcCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999999999998653          123333333  5678999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||+.......                                                          
T Consensus        70 ~~~~~id~lv~~ag~~~~~~~~----------------------------------------------------------   91 (236)
T PRK06483         70 QHTDGLRAIIHNASDWLAEKPG----------------------------------------------------------   91 (236)
T ss_pred             hhCCCccEEEECCccccCCCcC----------------------------------------------------------
Confidence            9999999999999975432222                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                       +.+.++|++++++|+.+++.++++++|.|++++  .++||++||..+..+  .+++..|++||+|+++|+++++.|+++
T Consensus        92 -~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~--~~~~~~Y~asKaal~~l~~~~a~e~~~  168 (236)
T PRK06483         92 -APLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG--SDKHIAYAASKAALDNMTLSFAAKLAP  168 (236)
T ss_pred             -ccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC--CCCCccHHHHHHHHHHHHHHHHHHHCC
Confidence             677899999999999999999999999998876  689999999988766  467889999999999999999999987


Q ss_pred             CCeEEEEecchhhhhHH-----HHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         247 DNIAVNALWPRTAIYTA-----AIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~-----~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                       +||||+|+||++.+..     ..+...  ...+..+...|+|+|+++.||++  +.++||+.+ +|+|.
T Consensus       169 -~irvn~v~Pg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~vdgg~  233 (236)
T PRK06483        169 -EVKVNSIAPALILFNEGDDAAYRQKAL--AKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLPVDGGR  233 (236)
T ss_pred             -CcEEEEEccCceecCCCCCHHHHHHHh--ccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEEeCccc
Confidence             5999999999643211     000111  11245567799999999999997  579999998 77664

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.8e-36  Score=283.31  Aligned_cols=238  Identities=25%  Similarity=0.330  Sum_probs=200.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~   81 (406)
                      +.+++||+++||||++|||++++++|+++|++|++++|+.+..       ++..+++...  +.++.++.+|++++++++
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~   76 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADAL-------AQARDELAEEFPEREVHGLAADVSDDEDRR   76 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHHHhhCCCCeEEEEECCCCCHHHHH
Confidence            4578999999999999999999999999999999999986542       2344445444  568899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|++|||||.....+.                                                    
T Consensus        77 ~~~~~~~~~~g~id~li~~ag~~~~~~~----------------------------------------------------  104 (257)
T PRK09242         77 AILDWVEDHWDGLHILVNNAGGNIRKAA----------------------------------------------------  104 (257)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCh----------------------------------------------------
Confidence            9999999999999999999997533222                                                    


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                             .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++
T Consensus       105 -------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la  175 (257)
T PRK09242        105 -------IDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH--VRSGAPYGMTKAALLQMTRNLA  175 (257)
T ss_pred             -------hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC--CCCCcchHHHHHHHHHHHHHHH
Confidence                   2788999999999999999999999999999888899999999988876  4678899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .|+.++||+||+|+||+ +.|++.+......        ..+..+..+|+|++++++||+++.+.+++|+.+ +|+|.
T Consensus       176 ~e~~~~~i~v~~i~Pg~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        176 VEWAEDGIRVNAVAPWY-IRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             HHHHHhCeEEEEEEECC-CCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCe
Confidence            99999999999999996 5565443221111        123456679999999999999988889999998 66553

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=287.18  Aligned_cols=224  Identities=21%  Similarity=0.265  Sum_probs=182.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++++++ 
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-   71 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN-------LEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-   71 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-
Confidence            689999998 699999999996 89999999998654       23345556556778889999999999999999988 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|+||||||+..                                                               
T Consensus        72 ~~~g~id~li~nAG~~~---------------------------------------------------------------   88 (275)
T PRK06940         72 QTLGPVTGLVHTAGVSP---------------------------------------------------------------   88 (275)
T ss_pred             HhcCCCCEEEECCCcCC---------------------------------------------------------------
Confidence            56899999999999631                                                               


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------------------------c
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------------------------F  220 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------------------------~  220 (406)
                         ..++|+.++++|+.++++++++++|+|+++  +++|++||.++..+..                            .
T Consensus        89 ---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (275)
T PRK06940         89 ---SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIE  163 (275)
T ss_pred             ---chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccccccccccccccccccccccC
Confidence               124588999999999999999999999764  7889999988765410                            0


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHH-hcCCC---------cccccccCChhhHHHHHH
Q psy6113         221 KNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM-LTGGS---------ADAKATSRKPEIMADAAY  290 (406)
Q Consensus       221 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~-~~~~~---------~~~~~~~~~pe~vA~~v~  290 (406)
                      +++..|++||+|+.+++++++.|++++|||||+|+||+ +.|++... +....         ..+..++.+|+|+|++++
T Consensus       164 ~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~  242 (275)
T PRK06940        164 DSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGI-ISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAE  242 (275)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCc-CcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHH
Confidence            24678999999999999999999999999999999996 56654322 11110         124467789999999999


Q ss_pred             HhhcCCCCCccceEE-EehhHH
Q psy6113         291 YILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       291 ~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ||+++.++++||+.+ +|+|..
T Consensus       243 fL~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        243 FLMGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             HHcCcccCcccCceEEEcCCeE
Confidence            999999999999988 777654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.6e-36  Score=311.66  Aligned_cols=232  Identities=27%  Similarity=0.364  Sum_probs=194.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+.||+++||||++|||+++|++|+++|++|++++|+.++++       +..   ...+.++..+.+|++|+++++++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~---~~~~~~~~~~~~D~~~~~~~~~~~~  335 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAK-------KLA---EALGDEHLSVQADITDEAAVESAFA  335 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHH---HHhCCceeEEEccCCCHHHHHHHHH
Confidence            457999999999999999999999999999999999865421       222   2235677889999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.+|++|+||||||+.....                                                         
T Consensus       336 ~~~~~~g~id~li~nAg~~~~~~---------------------------------------------------------  358 (520)
T PRK06484        336 QIQARWGRLDVLVNNAGIAEVFK---------------------------------------------------------  358 (520)
T ss_pred             HHHHHcCCCCEEEECCCCcCCCC---------------------------------------------------------
Confidence            99999999999999999753211                                                         


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                       ++.+.+.++|++++++|+.++++++++++|+|  .+.|+||++||.++..+  .+++..|++||+++++|+++++.|++
T Consensus       359 -~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~  433 (520)
T PRK06484        359 -PSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLA--LPPRNAYCASKAAVTMLSRSLACEWA  433 (520)
T ss_pred             -ChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCC--CCCCchhHHHHHHHHHHHHHHHHHhh
Confidence             12378899999999999999999999999999  34589999999999877  47889999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCC---------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGG---------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~---------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++|||||+|+||+ +.|++.......         ...+..+..+|+|+|++++||+++.+.++||+++ +|+|+
T Consensus       434 ~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        434 PAGIRVNTVAPGY-IETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             hhCeEEEEEEeCC-ccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            9999999999996 566554332211         0123456679999999999999998899999999 77765

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-36  Score=281.06  Aligned_cols=238  Identities=24%  Similarity=0.320  Sum_probs=202.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.+.       +.+..++++..+.++.++.+|+++++++.++
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   78 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT-------LEAAVAALRAAGGAAEALAFDIADEEAVAAA   78 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH-------HHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            567899999999999999999999999999999999998654       2345566666677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+.                                                      
T Consensus        79 ~~~~~~~~~~id~vi~~ag~~~~~~~------------------------------------------------------  104 (256)
T PRK06124         79 FARIDAEHGRLDILVNNVGARDRRPL------------------------------------------------------  104 (256)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            99999999999999999997543322                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+  .+++..|++||+++.+++++++.|
T Consensus       105 -----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  177 (256)
T PRK06124        105 -----AELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA--RAGDAVYPAAKQGLTGLMRALAAE  177 (256)
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC--CCCccHhHHHHHHHHHHHHHHHHH
Confidence                 2778899999999999999999999999999888899999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++........        ..+..++.+|+|++++++||+++.+.++||+.+ +|+|.
T Consensus       178 ~~~~~i~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        178 FGPHGITSNAIAPGY-FATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HHHhCcEEEEEEECC-ccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence            999999999999996 5554432221110        113456788999999999999999999999998 77654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-36  Score=280.78  Aligned_cols=234  Identities=24%  Similarity=0.359  Sum_probs=195.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+++.+|+++||||++|||+++|++|+++|++|++++|+.+..+       +..+   ..+.++.++.+|++++++++++
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~---~~~~~~~~~~~D~~~~~~~~~~   70 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR-------LAAL---EIGPAAIAVSLDVTRQDSIDRI   70 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH-------HHHH---HhCCceEEEEccCCCHHHHHHH
Confidence            45789999999999999999999999999999999999876422       1222   2245688899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+.                                                      
T Consensus        71 ~~~~~~~~~~id~li~~ag~~~~~~~------------------------------------------------------   96 (257)
T PRK07067         71 VAAAVERFGGIDILFNNAALFDMAPI------------------------------------------------------   96 (257)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCc------------------------------------------------------
Confidence            99999999999999999997644332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+.+.++|+.++++|+.+++.++++++|+|.+++ .++||++||..+..+  .+++..|++||++++.++++++.
T Consensus        97 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~  169 (257)
T PRK07067         97 -----LDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG--EALVSHYCATKAAVISYTQSAAL  169 (257)
T ss_pred             -----ccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC--CCCCchhhhhHHHHHHHHHHHHH
Confidence                 2778899999999999999999999999998764 479999999888766  46789999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhc---C--------------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLT---G--------------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~---~--------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      |++++||+||+|+||+ +.|++.+...   .              ....+..++.+|+|+|++++||+++.+.+++|+.+
T Consensus       170 e~~~~gi~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~  248 (257)
T PRK07067        170 ALIRHGINVNAIAPGV-VDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTY  248 (257)
T ss_pred             HhcccCeEEEEEeeCc-ccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEE
Confidence            9999999999999996 5565533210   0              00124456779999999999999998999999999


Q ss_pred             -Eehh
Q psy6113         306 -IDDE  309 (406)
Q Consensus       306 -~d~g  309 (406)
                       +|+|
T Consensus       249 ~v~gg  253 (257)
T PRK07067        249 NVDGG  253 (257)
T ss_pred             eecCC
Confidence             6665

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-36  Score=280.52  Aligned_cols=234  Identities=29%  Similarity=0.405  Sum_probs=196.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+.        .....++  .+.++.++.+|+++++++++++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~--------~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV--------AEVAAQL--LGGNAKGLVCDVSDSQSVEAAV   80 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--------HHHHHHh--hCCceEEEEecCCCHHHHHHHH
Confidence            56889999999999999999999999999999999997642        1122222  2345678999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.....+.                                                       
T Consensus        81 ~~~~~~~~~~d~vi~~ag~~~~~~~-------------------------------------------------------  105 (255)
T PRK06841         81 AAVISAFGRIDILVNSAGVALLAPA-------------------------------------------------------  105 (255)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999997643332                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.+++++++.++|+|++++.++||++||..+..+  .+++..|++||+++++++++++.|+
T Consensus       106 ----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  179 (255)
T PRK06841        106 ----EDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA--LERHVAYCASKAGVVGMTKVLALEW  179 (255)
T ss_pred             ----hhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC--CCCCchHHHHHHHHHHHHHHHHHHH
Confidence                2678899999999999999999999999999888899999999988766  4788899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++.......       ...+..++.+|+|+|+++++|+++.+.++||+.+ +|+|.
T Consensus       180 ~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        180 GPYGITVNAISPTV-VLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             HhhCeEEEEEEeCc-CcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            99999999999996 555443211100       0123456789999999999999999999999998 77664

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-36  Score=286.11  Aligned_cols=233  Identities=22%  Similarity=0.269  Sum_probs=194.6

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .++.+++||+++||||++|||+++|++|+++|++|++++|+.+++       ++..+++.. +.++..+.+|++|.++++
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l-------~~~~~~l~~-~~~~~~~~~Dv~d~~~v~   73 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAEL-------AALAAELGG-DDRVLTVVADVTDLAAMQ   73 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHhcC-CCcEEEEEecCCCHHHHH
Confidence            456789999999999999999999999999999999999986542       233333322 456777789999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|++|||||+....+.                                                    
T Consensus        74 ~~~~~~~~~~g~id~vI~nAG~~~~~~~----------------------------------------------------  101 (296)
T PRK05872         74 AAAEEAVERFGGIDVVVANAGIASGGSV----------------------------------------------------  101 (296)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCcCc----------------------------------------------------
Confidence            9999999999999999999998653332                                                    


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                             .+.+.++|++++++|+.++++++++++|+|.++ .|+||++||..+..+  .+++..|++||+++++|+++++
T Consensus       102 -------~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~~~~~l~  171 (296)
T PRK05872        102 -------AQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAA--APGMAAYCASKAGVEAFANALR  171 (296)
T ss_pred             -------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCC--CCCchHHHHHHHHHHHHHHHHH
Confidence                   378899999999999999999999999999875 489999999998876  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      .|++++||+||+|+||+ +.|++.+.....          ...+..+..+|+|+|+.+++++++...+++|...
T Consensus       172 ~e~~~~gi~v~~v~Pg~-v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~~~~  244 (296)
T PRK05872        172 LEVAHHGVTVGSAYLSW-IDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYAPRW  244 (296)
T ss_pred             HHHHHHCcEEEEEecCc-ccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEchHH
Confidence            99999999999999996 566554432211          1123456679999999999999988888877643

>KOG1207|consensus

Probab=100.00  E-value=9.2e-38  Score=263.02  Aligned_cols=230  Identities=25%  Similarity=0.330  Sum_probs=190.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|.|+++++||++.|||+++++.|++.|++|+.++|+++.          .....+...+.+..+..|+++++.+.+.+-
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~----------L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~   73 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEAN----------LLSLVKETPSLIIPIVGDLSAWEALFKLLV   73 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHH----------HHHHHhhCCcceeeeEecccHHHHHHHhhc
Confidence            6789999999999999999999999999999999999874          233344445668999999999777655543


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                          ..+++|.||||||+.-..++                                                        
T Consensus        74 ----~v~pidgLVNNAgvA~~~pf--------------------------------------------------------   93 (245)
T KOG1207|consen   74 ----PVFPIDGLVNNAGVATNHPF--------------------------------------------------------   93 (245)
T ss_pred             ----ccCchhhhhccchhhhcchH--------------------------------------------------------
Confidence                45789999999998755444                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhH-hcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK-KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~-~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                         .+++.++|++.|++|+++++.++|...+.+. ++..|.|||+||.++.++  +.++..|+++|+|+.++||+||.|+
T Consensus        94 ---~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~--~~nHtvYcatKaALDmlTk~lAlEL  168 (245)
T KOG1207|consen   94 ---GEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP--LDNHTVYCATKAALDMLTKCLALEL  168 (245)
T ss_pred             ---HHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc--cCCceEEeecHHHHHHHHHHHHHhh
Confidence               3899999999999999999999999766554 445789999999999988  5899999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHH-hcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEM-LTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~-~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++||||+|.|- ++.|.|-+. +..+.       .-|..++.+.+||.++++||+|+.++..||..+ ++||+.
T Consensus       169 Gp~kIRVNsVNPT-VVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  169 GPQKIRVNSVNPT-VVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             CcceeEeeccCCe-EEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCceeeecCCcc
Confidence            9999999999997 455544433 33221       125567889999999999999999999999999 776654

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-35  Score=278.84  Aligned_cols=236  Identities=25%  Similarity=0.310  Sum_probs=196.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+|+++||||++|||+++|++|+++|++|++++|+...      ..++..+++...+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEE------GAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL   74 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChH------HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            36899999999999999999999999999988765432      123445566667888999999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.++++|++|||||.......                                                          
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~----------------------------------------------------------   96 (256)
T PRK12743         75 IQRLGRIDVLVNNAGAMTKAPF----------------------------------------------------------   96 (256)
T ss_pred             HHHcCCCCEEEECCCCCCCCCh----------------------------------------------------------
Confidence            9999999999999997654322                                                          


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                       .+.+.++|+.++++|+.+++.++++++|+|.+++ .|+||++||..+..+  .++...|+++|+++.+++++++.++++
T Consensus        97 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~~~~~  173 (256)
T PRK12743         97 -LDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP--LPGASAYTAAKHALGGLTKAMALELVE  173 (256)
T ss_pred             -hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC--CCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence             2678899999999999999999999999997653 589999999988776  467889999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcC------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTG------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +||+||+|+||+ +.|++......      ....+..+..+|+|+|+++.||+++.+.+++|+++ +|+|..
T Consensus       174 ~~i~v~~v~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        174 HGILVNAVAPGA-IATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             hCeEEEEEEeCC-ccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            999999999996 55554322111      01123456679999999999999998999999999 776643

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=289.14  Aligned_cols=223  Identities=26%  Similarity=0.354  Sum_probs=190.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+++++|+++||||++|||+++|++|+++|++|++++|+.+++       ++..+++...+.++.++.+|++|.++++++
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l-------~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~   74 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEAL-------QAVAEECRALGAEVLVVPTDVTDADQVKAL   74 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence            4578999999999999999999999999999999999987653       345666777788899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|++|||||+.....+                                                      
T Consensus        75 ~~~~~~~~g~iD~lVnnAG~~~~~~~------------------------------------------------------  100 (330)
T PRK06139         75 ATQAASFGGRIDVWVNNVGVGAVGRF------------------------------------------------------  100 (330)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCc------------------------------------------------------
Confidence            99999999999999999998654333                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+.+|+++|+.|
T Consensus       101 -----~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~--~p~~~~Y~asKaal~~~~~sL~~E  173 (330)
T PRK06139        101 -----EETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA--QPYAAAYSASKFGLRGFSEALRGE  173 (330)
T ss_pred             -----ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999988899999999998876  477899999999999999999999


Q ss_pred             hcCC-CeEEEEecchhhhhHHHHHHhc---CCCcccccccCChhhHHHHHHHhhcC
Q psy6113         244 FKGD-NIAVNALWPRTAIYTAAIEMLT---GGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       244 ~~~~-gI~vn~v~PG~~~~t~~~~~~~---~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +.++ ||+|++|+||+ ++|++.+...   .....+.....+|+++|+.+++++..
T Consensus       174 l~~~~gI~V~~v~Pg~-v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        174 LADHPDIHVCDVYPAF-MDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             hCCCCCeEEEEEecCC-ccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhC
Confidence            9875 99999999996 6665443211   11112234467999999999999864

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=3.4e-35  Score=275.71  Aligned_cols=238  Identities=26%  Similarity=0.336  Sum_probs=194.6

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .+..+++||+++||||++|||+++|++|+++|++|++++|+.++.          .+..+..+.++.++.+|+++.++++
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~Dl~~~~~~~   72 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG----------SKVAKALGENAWFIAMDVADEAQVA   72 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHH----------HHHHHHcCCceEEEEccCCCHHHHH
Confidence            357889999999999999999999999999999999999876531          1122233567889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|++|||||.......                                                    
T Consensus        73 ~~~~~~~~~~g~id~li~~ag~~~~~~~----------------------------------------------------  100 (255)
T PRK05717         73 AGVAEVLGQFGRLDALVCNAAIADPHNT----------------------------------------------------  100 (255)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccCCCC----------------------------------------------------
Confidence            9999999999999999999997643210                                                    


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                           ++.+.+.++|+.++++|+.+++.++++++|+|.+.+ ++||++||..+..+  .+++..|++||+|+++++++++
T Consensus       101 -----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~ii~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la  172 (255)
T PRK05717        101 -----TLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-GAIVNLASTRARQS--EPDTEAYAASKGGLLALTHALA  172 (255)
T ss_pred             -----ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-cEEEEEcchhhcCC--CCCCcchHHHHHHHHHHHHHHH
Confidence                 123778899999999999999999999999997754 89999999998876  3678899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhc-------CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLT-------GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~-------~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .++.+ +|+||+|+||+ +.|++.....       .....+..+..+|+|+|+.+.||+++.+.+++|+.+ +|+|..
T Consensus       173 ~~~~~-~i~v~~i~Pg~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        173 ISLGP-EIRVNAVSPGW-IDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             HHhcC-CCEEEEEeccc-CcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCce
Confidence            99986 49999999996 5553321100       001234566789999999999999988889999988 666543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.6e-35  Score=273.81  Aligned_cols=235  Identities=18%  Similarity=0.255  Sum_probs=195.2

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |++|+++||||++|||+++|++|+++|++|++..+....      ...+..+++...+.++..+.+|++|.+++.+++++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   74 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSP------RRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDK   74 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChH------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            568999999999999999999999999998886443221      11233445555677888899999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|++|||||.....+.                                                         
T Consensus        75 ~~~~~~~id~li~~ag~~~~~~~---------------------------------------------------------   97 (246)
T PRK12938         75 VKAEVGEIDVLVNNAGITRDVVF---------------------------------------------------------   97 (246)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCh---------------------------------------------------------
Confidence            99999999999999997543322                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                        .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .+++..|+++|++++.++++++.|+.+
T Consensus        98 --~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~y~~sK~a~~~~~~~l~~~~~~  173 (246)
T PRK12938         98 --RKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG--QFGQTNYSTAKAGIHGFTMSLAQEVAT  173 (246)
T ss_pred             --hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC--CCCChhHHHHHHHHHHHHHHHHHHhhh
Confidence              2788999999999999999999999999999888899999999988766  467889999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +||++|+|+||+ +.|++.....+.      ...+..+..+|+++++++.||+++.+.+++|+.+ +|+|
T Consensus       174 ~gi~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        174 KGVTVNTVSPGY-IGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             hCeEEEEEEecc-cCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            999999999996 555544322111      0123456789999999999999998899999999 6665

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=5.3e-35  Score=274.74  Aligned_cols=227  Identities=22%  Similarity=0.272  Sum_probs=185.6

Q ss_pred             EEEEecCCchHHHHHHHHHHH----cCCeEEEEecCCCCCCCCcccHHHHHHHHHH--cCCeeeeeeecCCChHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAK----DGANIVIAAKTAEPHPKLPGTIYSAAKEVED--AGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~----~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~--~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++||||++|||+++|++|++    +|++|++++|+.+.+       ++..+++..  .+.++.++.+|+++++++++++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~   74 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL-------RQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLL   74 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH-------HHHHHHHHhcCCCceEEEEEeccCCHHHHHHHH
Confidence            689999999999999999997    799999999987653       344555554  3557889999999999999999


Q ss_pred             HHHHHhcCCc----cEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          85 NAAVDKFGGI----DILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        85 ~~i~~~~g~i----D~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++.+.++++    |+||||||........                                                  
T Consensus        75 ~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~--------------------------------------------------  104 (256)
T TIGR01500        75 KALRELPRPKGLQRLLLINNAGTLGDVSKG--------------------------------------------------  104 (256)
T ss_pred             HHHHhccccCCCceEEEEeCCcccCccccc--------------------------------------------------
Confidence            9999887753    6999999975432111                                                  


Q ss_pred             cccccCCCCC-CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         161 SAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       161 g~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                             +.+ .+.++|++++++|+.+++.+++.++|.|++++  .++||++||..+..+  .+++..|++||+|+++|+
T Consensus       105 -------~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~  175 (256)
T TIGR01500       105 -------FVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP--FKGWALYCAGKAARDMLF  175 (256)
T ss_pred             -------cccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC--CCCchHHHHHHHHHHHHH
Confidence                   012 34688999999999999999999999998753  479999999998876  478899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ++++.|++++||+||+|+||+ +.|++.+...+..           ..+..+..+|+|+|+.++||++. ++++||+++
T Consensus       176 ~~la~e~~~~~i~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~~-~~~~~G~~~  252 (256)
T TIGR01500       176 QVLALEEKNPNVRVLNYAPGV-LDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLEK-DKFKSGAHV  252 (256)
T ss_pred             HHHHHHhcCCCeEEEEecCCc-ccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-CCcCCccee
Confidence            999999999999999999996 6676654332110           11345678999999999999974 679999987

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-35  Score=274.81  Aligned_cols=234  Identities=18%  Similarity=0.239  Sum_probs=194.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-C-CeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-G-GNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g-~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+       ...+++... + .++.++.+|+++.+++.+++++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   74 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAA-------NVAQEINAEYGEGMAYGFGADATSEQSVLALSRG   74 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-------HHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999865432       233344332 2 4688999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|++|||||........                                                        
T Consensus        75 ~~~~~~~id~vv~~ag~~~~~~~~--------------------------------------------------------   98 (259)
T PRK12384         75 VDEIFGRVDLLVYNAGIAKAAFIT--------------------------------------------------------   98 (259)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcc--------------------------------------------------------
Confidence            999999999999999976543332                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         +.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+  .+....|++||+|+++++++++.|++
T Consensus        99 ---~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~sKaa~~~l~~~la~e~~  173 (259)
T PRK12384         99 ---DFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG--SKHNSGYSAAKFGGVGLTQSLALDLA  173 (259)
T ss_pred             ---cCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC--CCCCchhHHHHHHHHHHHHHHHHHHH
Confidence               788899999999999999999999999998876 689999999887765  36678999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcC---------C--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTG---------G--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~---------~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      ++||+||+|+||.+..+++.....+         .        ...+..++.+|+|++++++||+++.+.+++|+.+ +|
T Consensus       174 ~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~  253 (259)
T PRK12384        174 EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVT  253 (259)
T ss_pred             HcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEc
Confidence            9999999999996545543221100         0        0124456779999999999999988889999988 66


Q ss_pred             hhH
Q psy6113         308 DEV  310 (406)
Q Consensus       308 ~g~  310 (406)
                      +|.
T Consensus       254 ~g~  256 (259)
T PRK12384        254 GGQ  256 (259)
T ss_pred             CCE
Confidence            653

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-35  Score=274.82  Aligned_cols=240  Identities=26%  Similarity=0.350  Sum_probs=200.4

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |....++.+|+++||||++|||++++++|+++|++|++++|+.+++       +....++...+.++.++.+|+++++++
T Consensus         1 ~~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~   73 (258)
T PRK06949          1 MGRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERL-------KELRAEIEAEGGAAHVVSLDVTDYQSI   73 (258)
T ss_pred             CCcccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3445678999999999999999999999999999999999987642       234455555566788999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|++|||||.....+..                                                  
T Consensus        74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~--------------------------------------------------  103 (258)
T PRK06949         74 KAAVAHAETEAGTIDILVNNSGVSTTQKLV--------------------------------------------------  103 (258)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcc--------------------------------------------------
Confidence            999999999999999999999975443322                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--------CCeEEEeCCCCCCCCCccCCchhhhHhhHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--------HAHILNISPPLNLNPFWFKNHVAYTISKYG  232 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--------~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa  232 (406)
                               +.+.++|+.++++|+.+++.++++++|.|.++.        .++||++||..+..+  .+...+|+++|++
T Consensus       104 ---------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a  172 (258)
T PRK06949        104 ---------DVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV--LPQIGLYCMSKAA  172 (258)
T ss_pred             ---------cCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC--CCCccHHHHHHHH
Confidence                     677889999999999999999999999998764        479999999988765  4677899999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ++.++++++.+++++||+||+|+||+ +.|++.......       ...+..+..+|+|+|+.++||+++.+.++||+++
T Consensus       173 ~~~~~~~la~~~~~~~i~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i  251 (258)
T PRK06949        173 VVHMTRAMALEWGRHGINVNAICPGY-IDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAII  251 (258)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEeeCC-CcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEE
Confidence            99999999999999999999999997 456543321110       0123457789999999999999999999999999


Q ss_pred             -Eehh
Q psy6113         306 -IDDE  309 (406)
Q Consensus       306 -~d~g  309 (406)
                       +|+|
T Consensus       252 ~~dgg  256 (258)
T PRK06949        252 SADDG  256 (258)
T ss_pred             EeCCC
Confidence             6665

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.1e-34  Score=271.44  Aligned_cols=228  Identities=21%  Similarity=0.291  Sum_probs=195.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|++|+++||||++|||++++++|+++|++|++++|+.                ....+.++.++++|+++++++++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----------------~~~~~~~~~~~~~D~~~~~~~~~~~   67 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----------------LTQEDYPFATFVLDVSDAAAVAQVC   67 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----------------hhhcCCceEEEEecCCCHHHHHHHH
Confidence            678999999999999999999999999999999999875                1123557888999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.....+..                                                      
T Consensus        68 ~~~~~~~~~id~vi~~ag~~~~~~~~------------------------------------------------------   93 (252)
T PRK08220         68 QRLLAETGPLDVLVNAAGILRMGATD------------------------------------------------------   93 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcc------------------------------------------------------
Confidence            99999999999999999976543322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|.+++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++.|+
T Consensus        94 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  166 (252)
T PRK08220         94 -----SLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP--RIGMAAYGASKAALTSLAKCVGLEL  166 (252)
T ss_pred             -----cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC--CCCCchhHHHHHHHHHHHHHHHHHh
Confidence                 778899999999999999999999999999888899999999988766  3678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC----------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG----------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~----------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      +++||+||+|+||+ +.|++.......                ...+..+..+|+|+|++++||+++.+.+++|+.+ +|
T Consensus       167 ~~~~i~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~  245 (252)
T PRK08220        167 APYGVRCNVVSPGS-TDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVD  245 (252)
T ss_pred             hHhCeEEEEEecCc-CcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEEC
Confidence            99999999999996 555543322110                0123456789999999999999998899999998 77


Q ss_pred             hhH
Q psy6113         308 DEV  310 (406)
Q Consensus       308 ~g~  310 (406)
                      +|.
T Consensus       246 gg~  248 (252)
T PRK08220        246 GGA  248 (252)
T ss_pred             CCe
Confidence            663

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-34  Score=271.00  Aligned_cols=235  Identities=26%  Similarity=0.380  Sum_probs=196.8

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEE-EecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVI-AAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl-~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      |.+|+++||||++|||++++++|+++|++|++ ..|+.++       .++..++++..+.++.++.+|++++++++++++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA-------AEETAEEIEALGRKALAVKANVGDVEKIKEMFA   74 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            57899999999999999999999999999876 4666543       234555666677889999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|+||||||.....+.                                                        
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~--------------------------------------------------------   98 (250)
T PRK08063         75 QIDEEFGRLDVFVNNAASGVLRPA--------------------------------------------------------   98 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCc--------------------------------------------------------
Confidence            999999999999999997644333                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|+..+++|+.+++.++++++|+|++++.|+||++||..+..+  .++...|++||+++++|+++++.|+.
T Consensus        99 ---~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~y~~sK~a~~~~~~~~~~~~~  173 (250)
T PRK08063         99 ---MELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY--LENYTTVGVSKAALEALTRYLAVELA  173 (250)
T ss_pred             ---ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC--CCCccHHHHHHHHHHHHHHHHHHHHh
Confidence               2788899999999999999999999999999988899999999887765  36778999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.||++|+|+||+ +.+++........        ..+..+..+|+|+|+.+++++++...+++|+++ +|+|.
T Consensus       174 ~~~i~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        174 PKGIAVNAVSGGA-VDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             HhCeEEEeEecCc-ccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence            9999999999996 5555443222110        112345679999999999999987889999998 66654

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=272.31  Aligned_cols=235  Identities=29%  Similarity=0.346  Sum_probs=196.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.+..        +..+++...+.++.++.+|+++++++++++
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--------EFAEELRALQPRAEFVQVDLTDDAQCRDAV   74 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--------HHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            579999999999999999999999999999999999987642        244556666778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.......                                                       
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~-------------------------------------------------------   99 (258)
T PRK08628         75 EQTVAKFGRIDGLVNNAGVNDGVGL-------------------------------------------------------   99 (258)
T ss_pred             HHHHHhcCCCCEEEECCcccCCCcc-------------------------------------------------------
Confidence            9999999999999999997433221                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          ...+ ++|+..+++|+.+++.+++.++|+|++.. ++||++||..+..+  .+++..|++||+++++++++++.|+
T Consensus       100 ----~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~  171 (258)
T PRK08628        100 ----EAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR-GAIVNISSKTALTG--QGGTSGYAAAKGAQLALTREWAVAL  171 (258)
T ss_pred             ----cCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC-cEEEEECCHHhccC--CCCCchhHHHHHHHHHHHHHHHHHH
Confidence                1334 88999999999999999999999998654 89999999988876  3678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcC---CCc---------ccc-cccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTG---GSA---------DAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~---~~~---------~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .++||+||+|+||+ +.|++.+.+..   ...         .+. .++.+|+|+|++++||+++.+.+++|+.+ +|+|.
T Consensus       172 ~~~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        172 AKDGVRVNAVIPAE-VMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             hhcCeEEEEEecCc-cCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence            99999999999996 56655432111   000         011 25679999999999999998899999998 66665


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       251 ~  251 (258)
T PRK08628        251 V  251 (258)
T ss_pred             c
Confidence            3

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-34  Score=269.66  Aligned_cols=244  Identities=23%  Similarity=0.279  Sum_probs=196.8

Q ss_pred             cccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCC----CCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           5 GKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHP----KLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         5 ~~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~----~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      +++++|+++||||++  |||+++|++|+++|++|++++|++....    ...........++...+.++.++.+|+++++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            367899999999995  9999999999999999999999732110    0000011134455556778999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.++++|++|||||+....+.                                                 
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~-------------------------------------------------  111 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRL-------------------------------------------------  111 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCCh-------------------------------------------------
Confidence            9999999999999999999999997644332                                                 


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                                .+.+.++|+..+++|+.+++.++++++|.|.+++.++||++||..+..+  .+++..|++||++++++++
T Consensus       112 ----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~  179 (256)
T PRK12748        112 ----------EELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP--MPDELAYAATKGAIEAFTK  179 (256)
T ss_pred             ----------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC--CCCchHHHHHHHHHHHHHH
Confidence                      2778899999999999999999999999998877799999999988766  4678899999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHH-HhcC--CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIE-MLTG--GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~-~~~~--~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++.|+.++||+||+|+||+ +.|.+.. ....  ....+..+..+|+|+|+.+.||+++.+.+++|+++ +|+|.
T Consensus       180 ~la~e~~~~~i~v~~i~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        180 SLAPELAEKGITVNAVNPGP-TDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             HHHHHHHHhCeEEEEEEeCc-ccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence            99999999999999999996 4553211 1100  01123345678999999999999998889999999 66653

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=271.87  Aligned_cols=236  Identities=26%  Similarity=0.399  Sum_probs=197.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+.       .++..+++...+.++.++.+|++++++++++++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER-------LDEVAAEIDDLGRRALAVPTDITDEDQCANLVA   74 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999998654       234455666667788999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|++|||||......                                                         
T Consensus        75 ~~~~~~g~~d~vi~~ag~~~~~~---------------------------------------------------------   97 (258)
T PRK07890         75 LALERFGRVDALVNNAFRVPSMK---------------------------------------------------------   97 (258)
T ss_pred             HHHHHcCCccEEEECCccCCCCC---------------------------------------------------------
Confidence            99999999999999999753311                                                         


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                       ++.+.+.++|++++++|+.+++.++++++|.|.+.+ ++||++||..+..+  .+++..|+++|++++.++++++.|++
T Consensus        98 -~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~--~~~~~~Y~~sK~a~~~l~~~~a~~~~  173 (258)
T PRK07890         98 -PLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHS--QPKYGAYKMAKGALLAASQSLATELG  173 (258)
T ss_pred             -CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccC--CCCcchhHHHHHHHHHHHHHHHHHHh
Confidence             123778899999999999999999999999998764 79999999988776  47888999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHH-hcC----------------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEM-LTG----------------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~-~~~----------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      ++||++|+|+||+ +.+++... ...                ....+..+..+|+|+|++++||+++.+.++||+.+ +|
T Consensus       174 ~~~i~v~~v~pg~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~  252 (258)
T PRK07890        174 PQGIRVNSVAPGY-IWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVN  252 (258)
T ss_pred             hcCcEEEEEeCCc-cCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeC
Confidence            9999999999996 45443321 100                00123345678999999999999987889999998 77


Q ss_pred             hhH
Q psy6113         308 DEV  310 (406)
Q Consensus       308 ~g~  310 (406)
                      +|.
T Consensus       253 gg~  255 (258)
T PRK07890        253 CGE  255 (258)
T ss_pred             Ccc
Confidence            664

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-34  Score=270.01  Aligned_cols=224  Identities=17%  Similarity=0.217  Sum_probs=182.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC-eeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG-NCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      ++++||||++|||+++|++|+ +|++|++++|+.++       +++..++++..+. .+.++.+|++|+++++++++++.
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   72 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEA-------AQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQ   72 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHH-------HHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHH
Confidence            579999999999999999999 59999999998765       3345566666554 47889999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.+|++|++|||||+.......                                                          
T Consensus        73 ~~~g~id~lv~nag~~~~~~~~----------------------------------------------------------   94 (246)
T PRK05599         73 ELAGEISLAVVAFGILGDQERA----------------------------------------------------------   94 (246)
T ss_pred             HhcCCCCEEEEecCcCCCchhh----------------------------------------------------------
Confidence            9999999999999976432221                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                       +.+.+++.+++++|+.+++.+++.++|+|.+++ .|+||++||..+..+  .+++..|++||+|+.+|+++++.|++++
T Consensus        95 -~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~el~~~  171 (246)
T PRK05599         95 -ETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA--RRANYVYGSTKAGLDAFCQGLADSLHGS  171 (246)
T ss_pred             -hcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC--CcCCcchhhHHHHHHHHHHHHHHHhcCC
Confidence             556677888999999999999999999998764 699999999999876  3678899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehhH
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV  310 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~  310 (406)
                      ||+||+|+||+ +.|++.....     +.....+|||+|+.++++++....  ++.+..+++.
T Consensus       172 ~I~v~~v~PG~-v~T~~~~~~~-----~~~~~~~pe~~a~~~~~~~~~~~~--~~~~~~~~~~  226 (246)
T PRK05599        172 HVRLIIARPGF-VIGSMTTGMK-----PAPMSVYPRDVAAAVVSAITSSKR--STTLWIPGRL  226 (246)
T ss_pred             CceEEEecCCc-ccchhhcCCC-----CCCCCCCHHHHHHHHHHHHhcCCC--CceEEeCccH
Confidence            99999999996 6665543221     112235899999999999986432  3344455443

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=275.04  Aligned_cols=223  Identities=20%  Similarity=0.263  Sum_probs=186.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |..|+||+++||||++|||+++|++|+++|++|++++|+.+++       .+..+++...+.++.++.+|++|+++++++
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l-------~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   73 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGL-------RQAVNHLRAEGFDVHGVMCDVRHREEVTHL   73 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            4568999999999999999999999999999999999986543       345556666677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+.......                                                     
T Consensus        74 ~~~~~~~~g~id~li~nAg~~~~~~~~-----------------------------------------------------  100 (275)
T PRK05876         74 ADEAFRLLGHVDVVFSNAGIVVGGPIV-----------------------------------------------------  100 (275)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcc-----------------------------------------------------
Confidence            999999999999999999986543332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|+.++++|+.+++.++++++|.|.+++ .|+||++||..+..+  .++...|++||+++.+|+++|+.
T Consensus       101 ------~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~  172 (275)
T PRK05876        101 ------EMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP--NAGLGAYGVAKYGVVGLAETLAR  172 (275)
T ss_pred             ------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC--CCCCchHHHHHHHHHHHHHHHHH
Confidence                  788999999999999999999999999998775 689999999998876  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC------------C-c--ccccccCChhhHHHHHHHhhcC
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG------------S-A--DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------------~-~--~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      |++++||+|++|+||+ +.|++.......            . .  .......+|+|+|+.++..+..
T Consensus       173 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        173 EVTADGIGVSVLCPMV-VETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             HhhhcCcEEEEEEeCc-cccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence            9999999999999996 566543221100            0 0  0112357899999999887753

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-34  Score=268.12  Aligned_cols=233  Identities=24%  Similarity=0.289  Sum_probs=193.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.+..          .+.....+.++.++++|+++.+++.++
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASL----------EAARAELGESALVIRADAGDVAAQKAL   70 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHH----------HHHHHHhCCceEEEEecCCCHHHHHHH
Confidence            3468899999999999999999999999999999999975431          122233366788899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|++|||||.....+.                                                      
T Consensus        71 ~~~~~~~~~~id~vi~~ag~~~~~~~------------------------------------------------------   96 (249)
T PRK06500         71 AQALAEAFGRLDAVFINAGVAKFAPL------------------------------------------------------   96 (249)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            99999999999999999997543322                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|+.++++|+.+++.++++++|+|.++  +++|+++|..+..+  .++...|+++|+++++++++++.|
T Consensus        97 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~i~~~S~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  167 (249)
T PRK06500         97 -----EDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP--ASIVLNGSINAHIG--MPNSSVYAASKAALLSLAKTLSGE  167 (249)
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechHhccC--CCCccHHHHHHHHHHHHHHHHHHH
Confidence                 278889999999999999999999999999653  78999999888766  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||++++|+||. +.|++.+......            ..+..+..+|+|+|++++||+++.+.+++|+.+ +|+|.
T Consensus       168 ~~~~gi~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        168 LLPRGIRVNAVSPGP-VQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGGM  246 (249)
T ss_pred             hhhcCeEEEEEeeCc-CCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            999999999999995 6666544321000            113345679999999999999988889999998 77664

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-34  Score=297.97  Aligned_cols=235  Identities=27%  Similarity=0.438  Sum_probs=196.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++          +.....+.++.++.+|++++++++++++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~   71 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERAR----------ERADSLGPDHHALAMDVSDEAQIREGFE   71 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------HHHHHhCCceeEEEeccCCHHHHHHHHH
Confidence            468999999999999999999999999999999999866422          2223336678889999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+.+.++++|+||||||+..+..                                                         
T Consensus        72 ~~~~~~g~iD~li~nag~~~~~~---------------------------------------------------------   94 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVTDPTM---------------------------------------------------------   94 (520)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCC---------------------------------------------------------
Confidence            99999999999999999743210                                                         


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCC-eEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g-~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                      .++.+.+.++|++++++|+.+++.++++++|+|++++.| +||++||..+..+  .+++..|+++|+|+.+|+++++.|+
T Consensus        95 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~  172 (520)
T PRK06484         95 TATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA--LPKRTAYSASKAAVISLTRSLACEW  172 (520)
T ss_pred             cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC--CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            112378899999999999999999999999999887655 9999999999877  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .++||+||+|+||+ +.|++........         ..+..+..+|+++|+.++||+++.+.+++|+++ +++|.
T Consensus       173 ~~~~i~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        173 AAKGIRVNAVLPGY-VRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGGW  247 (520)
T ss_pred             hhhCeEEEEEccCC-cCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEecCCe
Confidence            99999999999996 5666654322110         112345679999999999999998999999999 66654

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=266.91  Aligned_cols=217  Identities=19%  Similarity=0.222  Sum_probs=171.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .++||||++|||++++++|+++|++|++++|+.++++       +..+++     .+.++.+|++++++++++++++.+ 
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~-------~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~-   68 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLE-------VAAKEL-----DVDAIVCDNTDPASLEEARGLFPH-   68 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh-
Confidence            4899999999999999999999999999999865421       222221     356788999999999999887753 


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++|||||........                                                     ...++.+
T Consensus        69 --~id~lv~~ag~~~~~~~~-----------------------------------------------------~~~~~~~   93 (223)
T PRK05884         69 --HLDTIVNVPAPSWDAGDP-----------------------------------------------------RTYSLAD   93 (223)
T ss_pred             --cCcEEEECCCccccCCCC-----------------------------------------------------cccchhc
Confidence              699999999853211100                                                     0011124


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeE
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA  250 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~  250 (406)
                       +.++|++++++|+.++++++++++|+|++  .|+||++||..   .   +++..|++||+|+.+|+++++.|++++|||
T Consensus        94 -~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~---~---~~~~~Y~asKaal~~~~~~la~e~~~~gI~  164 (223)
T PRK05884         94 -TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN---P---PAGSAEAAIKAALSNWTAGQAAVFGTRGIT  164 (223)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC---C---CCccccHHHHHHHHHHHHHHHHHhhhcCeE
Confidence             46899999999999999999999999975  48999999976   1   345789999999999999999999999999


Q ss_pred             EEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         251 VNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       251 vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ||+|+||+ +.|++.+....   .   +..+|+|+|+.+.||+++.++++||+.+ +|+|++
T Consensus       165 v~~v~PG~-v~t~~~~~~~~---~---p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~~  219 (223)
T PRK05884        165 INAVACGR-SVQPGYDGLSR---T---PPPVAAEIARLALFLTTPAARHITGQTLHVSHGAL  219 (223)
T ss_pred             EEEEecCc-cCchhhhhccC---C---CCCCHHHHHHHHHHHcCchhhccCCcEEEeCCCee
Confidence            99999997 55554332211   1   1248999999999999999999999998 777765

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.1e-34  Score=269.37  Aligned_cols=230  Identities=23%  Similarity=0.345  Sum_probs=192.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++||||++|||+++|++|+++|++|++++|+.+.      ......++++..+.++.++.+|+++.+++.++++++.+.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRS------DAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH   74 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999876432      1234455666667789999999999999999999999999


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                      +++|++|||||+....+..                                                           +.
T Consensus        75 ~~i~~li~~ag~~~~~~~~-----------------------------------------------------------~~   95 (239)
T TIGR01831        75 GAYYGVVLNAGITRDAAFP-----------------------------------------------------------AL   95 (239)
T ss_pred             CCCCEEEECCCCCCCCchh-----------------------------------------------------------hC
Confidence            9999999999986543322                                                           67


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhh-HHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeE
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCL-PYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA  250 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~-p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~  250 (406)
                      +.++|+.++++|+.++++++++++ |.+++++.++||++||..+..+  .+++..|+++|+++.+++++++.|+.++||+
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~  173 (239)
T TIGR01831        96 SEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG--NRGQVNYSAAKAGLIGATKALAVELAKRKIT  173 (239)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC--CCCCcchHHHHHHHHHHHHHHHHHHhHhCeE
Confidence            889999999999999999999875 5556566789999999998877  4778899999999999999999999999999


Q ss_pred             EEEecchhhhhHHHHHHhcCC-----CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         251 VNALWPRTAIYTAAIEMLTGG-----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       251 vn~v~PG~~~~t~~~~~~~~~-----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ||+|+||+ +.|++.....+.     ...+..+..+|+|+|+.++||+++.+.+++|+.+ +|+|
T Consensus       174 v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       174 VNCIAPGL-IDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             EEEEEEcc-CccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            99999996 566554322211     0124456789999999999999999999999998 6665

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=269.44  Aligned_cols=237  Identities=28%  Similarity=0.366  Sum_probs=197.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++       +++..+.+...+.++.++.+|+++++++.+++
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   78 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ-------LDEVAEQIRAAGRRAHVVAADLAHPEATAGLA   78 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998654       23344555555677889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.......                                                       
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~~~~~~-------------------------------------------------------  103 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVGGTMPNPL-------------------------------------------------------  103 (263)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999997543322                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHh-cCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK-SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          .+.+.++|+.++++|+.+++.+++++.|+|.+ .+.++||++||..+..+  .++...|++||+++++++++++.|
T Consensus       104 ----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~e  177 (263)
T PRK07814        104 ----LSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA--GRGFAAYGTAKAALAHYTRLAALD  177 (263)
T ss_pred             ----hhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC--CCCCchhHHHHHHHHHHHHHHHHH
Confidence                27888999999999999999999999999987 56789999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.+ +|+||+|+||+ +.|.+.......        ...+..+..+|+|+|++++|++++.+.+++|+.+ +++|..
T Consensus       178 ~~~-~i~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~  252 (263)
T PRK07814        178 LCP-RIRVNAIAPGS-ILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLT  252 (263)
T ss_pred             HCC-CceEEEEEeCC-CcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCcc
Confidence            987 69999999996 555443322111        0123345678999999999999988889999998 666544

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=269.23  Aligned_cols=237  Identities=20%  Similarity=0.247  Sum_probs=186.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++++|+++||||++|||+++|++|+++|++|++++++.++..+   ......+++...+.++.++++|+++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKA---DAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchH---HHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence            45789999999999999999999999999997777665432221   133344555555678889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||+....+..                                                      
T Consensus        81 ~~~~~~~~~id~li~~ag~~~~~~~~------------------------------------------------------  106 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVLKKPIV------------------------------------------------------  106 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccCCCCcc------------------------------------------------------
Confidence            99999999999999999975433322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEe-CCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNI-SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~v-sS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +.+.++|++++++|+.+++.++++++|+|+++  ++|+++ ||..+..   .+++..|++||+|++.|+++++.|
T Consensus       107 -----~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e  176 (257)
T PRK12744        107 -----EISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAF---TPFYSAYAGSKAPVEHFTRAASKE  176 (257)
T ss_pred             -----cCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhccc---CCCcccchhhHHHHHHHHHHHHHH
Confidence                 77889999999999999999999999999754  677776 5544432   256789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC----------cccc--cccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS----------ADAK--ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~----------~~~~--~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.++||+||+|+||+ +.|++........          ..+.  .+..+|+|+|+++.||+++ +.+++|+.+ +|+|.
T Consensus       177 ~~~~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg~  254 (257)
T PRK12744        177 FGARGISVTAVGPGP-MDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGGY  254 (257)
T ss_pred             hCcCceEEEEEecCc-cccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-cceeecceEeecCCc
Confidence            999999999999996 5554432111000          0111  1567899999999999996 678999988 66553

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=5e-34  Score=267.53  Aligned_cols=239  Identities=23%  Similarity=0.291  Sum_probs=190.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.++.       ++..+++...  +..+.++.+|++|++++.+++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL-------NELLESLGKEFKSKKLSLVELDITDQESLEEFL   74 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH-------HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHH
Confidence            5689999999999999999999999999999999987653       2344444322  234567799999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.......                                                       
T Consensus        75 ~~~~~~~~~id~vi~~A~~~~~~~~-------------------------------------------------------   99 (256)
T PRK09186         75 SKSAEKYGKIDGAVNCAYPRNKDYG-------------------------------------------------------   99 (256)
T ss_pred             HHHHHHcCCccEEEECCcccccccc-------------------------------------------------------
Confidence            9999999999999999986432110                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------cCCchhhhHhhHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------FKNHVAYTISKYGMSMC  236 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------~~~~~~Y~asKaal~~l  236 (406)
                       .++.+.+.++|...+++|+.+++.++++++|+|++++.++||++||..+..+..        ......|++||++++++
T Consensus       100 -~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l  178 (256)
T PRK09186        100 -KKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHL  178 (256)
T ss_pred             -CccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHH
Confidence             112378899999999999999999999999999988889999999987654311        01234799999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhH---HHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYT---AAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t---~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++++.|+.++||+||+|+||++.+.   .+.+.....  .+..+..+|+|+|++++|++++.+.+++|+++ +|+|.
T Consensus       179 ~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        179 TKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKC--CNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             HHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhc--CCccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            99999999999999999999964332   111222111  23456789999999999999988899999998 67663

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-34  Score=272.87  Aligned_cols=238  Identities=29%  Similarity=0.411  Sum_probs=197.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++++++|+++||||++|||+++|++|+++|++|++++|+.+..      .......+...+.++.++.+|+++.++++++
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  114 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHED------ANETKQRVEKEGVKCLLIPGDVSDEAFCKDA  114 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH------HHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            4678899999999999999999999999999999999976431      2234455555677889999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.......                                                      
T Consensus       115 ~~~i~~~~~~iD~lI~~Ag~~~~~~~------------------------------------------------------  140 (290)
T PRK06701        115 VEETVRELGRLDILVNNAAFQYPQQS------------------------------------------------------  140 (290)
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCC------------------------------------------------------
Confidence            99999999999999999997543211                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          +.+.+.++|..++++|+.+++.++++++|.|+..  ++||++||..+..+  .+++..|++||+|++.++++++.+
T Consensus       141 ----~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g~iV~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~~  212 (290)
T PRK06701        141 ----LEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--SAIINTGSITGYEG--NETLIDYSATKGAIHAFTRSLAQS  212 (290)
T ss_pred             ----cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--CeEEEEecccccCC--CCCcchhHHHHHHHHHHHHHHHHH
Confidence                1378889999999999999999999999999653  79999999988876  367789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.++||+||+|+||+ +.|++.+....       ....+..++.+|+|+|++++||+++.+.+++|+.+ +|+|.
T Consensus       213 ~~~~gIrv~~i~pG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        213 LVQKGIRVNAVAPGP-IWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             hhhcCeEEEEEecCC-CCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            999999999999996 55544321110       01123456788999999999999998899999998 66653

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=7e-34  Score=266.21  Aligned_cols=231  Identities=28%  Similarity=0.401  Sum_probs=196.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|++++|+.+.       ..+..+++...+.++.++.+|+++++++.++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   73 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET-------AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAE   73 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999998543       2234555666677889999999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|+||||||.....+.                                                           .
T Consensus        74 ~~~~id~vi~~ag~~~~~~~-----------------------------------------------------------~   94 (254)
T TIGR02415        74 KFGGFDVMVNNAGVAPITPI-----------------------------------------------------------L   94 (254)
T ss_pred             HcCCCCEEEECCCcCCCCCc-----------------------------------------------------------c
Confidence            99999999999997644332                                                           2


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      +.+.++|+.++++|+.+++.+++.+++.|++.+ .++||++||..+..+  .+++..|++||+++++++++++.|+++.|
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~  172 (254)
T TIGR02415        95 EITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG--NPILSAYSSTKFAVRGLTQTAAQELAPKG  172 (254)
T ss_pred             cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC--CCCCcchHHHHHHHHHHHHHHHHHhcccC
Confidence            788999999999999999999999999998875 479999999988876  47889999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCC-----------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGS-----------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~-----------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |+|++|+||+ +.|++.+......                 ..+..++.+|+|+++++.||+++.+.+++|+++ +|+|
T Consensus       173 i~v~~v~Pg~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       173 ITVNAYCPGI-VKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             eEEEEEecCc-ccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence            9999999995 5666544322110                 112345789999999999999998899999999 6665

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-34  Score=266.71  Aligned_cols=239  Identities=29%  Similarity=0.409  Sum_probs=201.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |..+++|+++||||++|||+++++.|+++|++|++++|+.++.       ....++++..+.++.++.+|++++++++++
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   74 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA-------RELAAALEAAGGRAHAIAADLADPASVQRF   74 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            4568899999999999999999999999999999999886542       234455555667889999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||........                                                     
T Consensus        75 ~~~~~~~~~~id~vi~~ag~~~~~~~~-----------------------------------------------------  101 (250)
T PRK12939         75 FDAAAAALGGLDGLVNNAGITNSKSAT-----------------------------------------------------  101 (250)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChh-----------------------------------------------------
Confidence            999999999999999999976543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+..+  .++...|+++|++++.+++.++.+
T Consensus       102 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~y~~sK~~~~~~~~~l~~~  173 (250)
T PRK12939        102 ------ELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG--APKLGAYVASKGAVIGMTRSLARE  173 (250)
T ss_pred             ------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC--CCCcchHHHHHHHHHHHHHHHHHH
Confidence                  778899999999999999999999999999988899999999888766  367789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++.+|++++|+||+ +.|++......       ....+..++.+|+|+|+++++++++...+++|+.+ +|+|.+
T Consensus       174 ~~~~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        174 LGGRGITVNAIAPGL-TATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             HhhhCEEEEEEEECC-CCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            999999999999996 55544322211       01123456789999999999999988889999999 777643

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-34  Score=277.44  Aligned_cols=224  Identities=23%  Similarity=0.346  Sum_probs=191.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +..+++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~-------l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~   75 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEG-------LEALAAEIRAAGGEALAVVADVADAEAVQAA   75 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHHcCCcEEEEEecCCCHHHHHHH
Confidence            456889999999999999999999999999999999998654       3345666777788899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.+|++|++|||||.....+.                                                      
T Consensus        76 ~~~~~~~~g~iD~lInnAg~~~~~~~------------------------------------------------------  101 (334)
T PRK07109         76 ADRAEEELGPIDTWVNNAMVTVFGPF------------------------------------------------------  101 (334)
T ss_pred             HHHHHHHCCCCCEEEECCCcCCCCch------------------------------------------------------
Confidence            99999999999999999997543332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .+.+..|++||+++.+|+++++.|
T Consensus       102 -----~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~e  174 (334)
T PRK07109        102 -----EDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS--IPLQSAYCAAKHAIRGFTDSLRCE  174 (334)
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC--CCcchHHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999988899999999999876  477889999999999999999999


Q ss_pred             hcC--CCeEEEEecchhhhhHHHHHHhc---CCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         244 FKG--DNIAVNALWPRTAIYTAAIEMLT---GGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       244 ~~~--~gI~vn~v~PG~~~~t~~~~~~~---~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +..  .+|+|++|+||+ +.|++.+...   .....+..+..+|+++|+++++++++.
T Consensus       175 l~~~~~~I~v~~v~Pg~-v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        175 LLHDGSPVSVTMVQPPA-VNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HhhcCCCeEEEEEeCCC-ccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            975  479999999996 5665544321   111223455679999999999999764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=5.5e-34  Score=265.22  Aligned_cols=235  Identities=24%  Similarity=0.277  Sum_probs=195.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++++|+++||||++|||++++++|+++|+.|++.+|+.++++          +.....+.++.++.+|+++.++++++
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLE----------ALAAELGERVKIFPANLSDRDEVKAL   70 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH----------HHHHHhCCceEEEEccCCCHHHHHHH
Confidence            34678999999999999999999999999999998888765421          11222355788899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+..                                                     
T Consensus        71 ~~~~~~~~~~id~vi~~ag~~~~~~~~-----------------------------------------------------   97 (245)
T PRK12936         71 GQKAEADLEGVDILVNNAGITKDGLFV-----------------------------------------------------   97 (245)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCccc-----------------------------------------------------
Confidence            999999999999999999986543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+.++++|+.+++.+++++++.+.+++.++||++||..+..+  .+++..|+++|+++.++++.++.+
T Consensus        98 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sk~a~~~~~~~la~~  169 (245)
T PRK12936         98 ------RMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG--NPGQANYCASKAGMIGFSKSLAQE  169 (245)
T ss_pred             ------cCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcC--CCCCcchHHHHHHHHHHHHHHHHH
Confidence                  677889999999999999999999999998877899999999988876  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.++||++|+|+||+ +.|.+.......      ...+..+..+|+++++++.||+++...+++|+++ +|+|.
T Consensus       170 ~~~~~i~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        170 IATRNVTVNCVAPGF-IESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             hhHhCeEEEEEEECc-CcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            999999999999996 555543322111      1123455678999999999999987889999988 77664

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=3e-34  Score=265.93  Aligned_cols=228  Identities=27%  Similarity=0.333  Sum_probs=180.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|++|+++||||++|||+++|++|+++|++|++++|+.+.          ..+++.... .+.++.+|+++.+++.++
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~----------~~~~l~~~~-~~~~~~~D~~~~~~~~~~   69 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD----------AAERLAQET-GATAVQTDSADRDAVIDV   69 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH----------HHHHHHHHh-CCeEEecCCCCHHHHHHH
Confidence            346889999999999999999999999999999988764321          111221111 245678999999988777


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++    .++++|++|||||........                                                     
T Consensus        70 ~~----~~~~id~li~~ag~~~~~~~~-----------------------------------------------------   92 (237)
T PRK12742         70 VR----KSGALDILVVNAGIAVFGDAL-----------------------------------------------------   92 (237)
T ss_pred             HH----HhCCCcEEEECCCCCCCCCcc-----------------------------------------------------
Confidence            64    468899999999976433222                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|+.++++|+.+++.++++++|+|.+  .++||++||..+. .+  .++...|+++|++++.++++++.
T Consensus        93 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~  162 (237)
T PRK12742         93 ------ELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMP--VAGMAAYAASKSALQGMARGLAR  162 (237)
T ss_pred             ------cCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCC--CCCCcchHHhHHHHHHHHHHHHH
Confidence                  6788999999999999999999999999964  4899999998874 33  46788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC-----CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG-----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++++||+||+|+||+ +.|++.....+.     ...+..++.+|+|+|+.+.||+++.+.++||+.+ +|+|+
T Consensus       163 ~~~~~gi~v~~v~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        163 DFGPRGITINVVQPGP-IDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAF  235 (237)
T ss_pred             HHhhhCeEEEEEecCc-ccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCCc
Confidence            9999999999999996 555442211000     0123456789999999999999999999999999 66653

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-34  Score=265.29  Aligned_cols=235  Identities=29%  Similarity=0.391  Sum_probs=195.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||+++|+.|+++|++|+++.|+.+.      ...+..+++...+.++.++.+|+++.+++++++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAA------AADELVAEIEAAGGRAIAVQADVADAAAVTRLF   74 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHH------HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            46789999999999999999999999999999988776542      123445566666788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.....+.                                                       
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~-------------------------------------------------------   99 (245)
T PRK12937         75 DAAETAFGRIDVLVNNAGVMPLGTI-------------------------------------------------------   99 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999997643222                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|+.++++|+.+++.++++++|.|.+  .++||++||..+..+  .+++..|+++|++++.++++++.|+
T Consensus       100 ----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~~~  171 (245)
T PRK12937        100 ----ADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALP--LPGYGPYAASKAAVEGLVHVLANEL  171 (245)
T ss_pred             ----hhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCC--CCCCchhHHHHHHHHHHHHHHHHHh
Confidence                26788899999999999999999999999965  379999999888766  4778899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++.||++|+|+||+ +.|++.......       ...+..+..+|+|+|+.++||+++.+.+++|+++ +|+|
T Consensus       172 ~~~~i~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        172 RGRGITVNAVAPGP-VATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             hhcCeEEEEEEeCC-ccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence            99999999999996 555442111000       0123456679999999999999988889999999 6654

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=262.77  Aligned_cols=233  Identities=19%  Similarity=0.232  Sum_probs=192.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCC--hHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRD--EHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~--~~~v   80 (406)
                      |..|++|+++||||++|||+++++.|+++|++|++++|+.++.       ++..+++... +..+.++.+|+++  .+++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   73 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL-------EKVYDAIVEAGHPEPFAIRFDLMSAEEKEF   73 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH-------HHHHHHHHHcCCCCcceEEeeecccchHHH
Confidence            3458899999999999999999999999999999999987642       2344555443 3467788899986  5789


Q ss_pred             HHHHHHHHHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          81 QSAVNAAVDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        81 ~~~~~~i~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      .++++++.+.+ +++|++|||||......                                                   
T Consensus        74 ~~~~~~i~~~~~~~id~vi~~ag~~~~~~---------------------------------------------------  102 (239)
T PRK08703         74 EQFAATIAEATQGKLDGIVHCAGYFYALS---------------------------------------------------  102 (239)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeccccccCC---------------------------------------------------
Confidence            99999999988 88999999999753211                                                   


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                             ++.+.+.++|.+.+++|+.+++.++++++|.|.+.+.++||++||..+..+  .+++..|++||++++.|+++
T Consensus       103 -------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~sKaa~~~~~~~  173 (239)
T PRK08703        103 -------PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP--KAYWGGFGASKAALNYLCKV  173 (239)
T ss_pred             -------CccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC--CCCccchHHhHHHHHHHHHH
Confidence                   123788999999999999999999999999999887899999999988876  46778999999999999999


Q ss_pred             HHHhhcCC-CeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         240 MAEEFKGD-NIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       240 la~e~~~~-gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      ++.|+.++ +||||+|+||+ +.|++.....+.  .......+|+|+++.++||+++.+.++||+++.
T Consensus       174 la~e~~~~~~i~v~~v~pG~-v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  238 (239)
T PRK08703        174 AADEWERFGNLRANVLVPGP-INSPQRIKSHPG--EAKSERKSYGDVLPAFVWWASAESKGRSGEIVY  238 (239)
T ss_pred             HHHHhccCCCeEEEEEecCc-ccCccccccCCC--CCccccCCHHHHHHHHHHHhCccccCcCCeEee
Confidence            99999887 69999999996 566543322111  112345799999999999999999999999874

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-34  Score=264.47  Aligned_cols=223  Identities=23%  Similarity=0.324  Sum_probs=183.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||++++++|+++|++|++++|+....                ...++.++.+|++++      +
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~~~D~~~~------~   58 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----------------LSGNFHFLQLDLSDD------L   58 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCCcEEEEECChHHH------H
Confidence            468899999999999999999999999999999999975431                123577889999987      5


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||......                                                        
T Consensus        59 ~~~~~~~~~id~lv~~ag~~~~~~--------------------------------------------------------   82 (235)
T PRK06550         59 EPLFDWVPSVDILCNTAGILDDYK--------------------------------------------------------   82 (235)
T ss_pred             HHHHHhhCCCCEEEECCCCCCCCC--------------------------------------------------------
Confidence            556667789999999999753211                                                        


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                        ++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+..+  .+++..|+++|+++++++++++.|+
T Consensus        83 --~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~~  158 (235)
T PRK06550         83 --PLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA--GGGGAAYTASKHALAGFTKQLALDY  158 (235)
T ss_pred             --CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC--CCCCcccHHHHHHHHHHHHHHHHHh
Confidence              112778899999999999999999999999999888899999999988876  3678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHH-hcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEM-LTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~-~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ ++|++... +...       ...+..++.+|+|+|++++||+++.+.+++|+++ +|+|+
T Consensus       159 ~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        159 AKDGIQVFGIAPGA-VKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             hhcCeEEEEEeeCC-ccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence            99999999999996 55544221 1100       1123456789999999999999988899999998 66653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1e-33  Score=267.57  Aligned_cols=244  Identities=20%  Similarity=0.278  Sum_probs=182.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHH----HHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAV----QSAV   84 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v----~~~~   84 (406)
                      ++++||||++|||++++++|+++|++|++++|+.+.      .+.+..+++.. .+.++.++.+|++|++++    ++++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~   75 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAA------AASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAII   75 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHH------HHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHH
Confidence            689999999999999999999999999998765422      12233444433 345677899999999866    5566


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+.+.++++|+||||||...+.+..+.+.++.                                               
T Consensus        76 ~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~-----------------------------------------------  108 (267)
T TIGR02685        76 DACFRAFGRCDVLVNNASAFYPTPLLRGDAGEG-----------------------------------------------  108 (267)
T ss_pred             HHHHHccCCceEEEECCccCCCCcccccccccc-----------------------------------------------
Confidence            666678899999999999865443321111000                                               


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                       ....+...++|.+++++|+.+++.++++++|+|+..      ..++||+++|..+..+  .+++.+|++||+|+++|++
T Consensus       109 -~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~--~~~~~~Y~asK~a~~~~~~  185 (267)
T TIGR02685       109 -VGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQP--LLGFTMYTMAKHALEGLTR  185 (267)
T ss_pred             -cccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCC--CcccchhHHHHHHHHHHHH
Confidence             000122335689999999999999999999999653      2478999999988766  4788899999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhH-HHH----HHhcCCCcccc-cccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYT-AAI----EMLTGGSADAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t-~~~----~~~~~~~~~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +|+.|++++||+||+|+||++... .+.    +.+...  .+. .+..+|+|+|+.++||+++.+.+++|+.+ +|+|..
T Consensus       186 ~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~  263 (267)
T TIGR02685       186 SAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRK--VPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS  263 (267)
T ss_pred             HHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHh--CCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCcee
Confidence            999999999999999999964211 111    111111  122 25679999999999999998999999998 776643

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.6e-33  Score=263.09  Aligned_cols=235  Identities=26%  Similarity=0.370  Sum_probs=198.0

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..       .+..+++...+.++.++.+|+++.++++++++.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   73 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAA-------EKVAADIRAKGGNAQAFACDITDRDSVDTAVAA   73 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999999987542       234445555567899999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|++|||||.....+..                                                        
T Consensus        74 ~~~~~~~~d~vi~~ag~~~~~~~~--------------------------------------------------------   97 (250)
T TIGR03206        74 AEQALGPVDVLVNNAGWDKFGPFT--------------------------------------------------------   97 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChh--------------------------------------------------------
Confidence            999999999999999975433322                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|+.++++|+.+++.++++++|.|++.+.++||++||..+..+  .++...|+++|+|++.++++++.++.+
T Consensus        98 ---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~~~~  172 (250)
T TIGR03206        98 ---KTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG--SSGEAVYAACKGGLVAFSKTMAREHAR  172 (250)
T ss_pred             ---hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC--CCCCchHHHHHHHHHHHHHHHHHHHhH
Confidence               677889999999999999999999999999888899999999988776  367889999999999999999999998


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .||++++++||+ +.|++........            ..+..+..+|+|+|+++.+|+++.+.+++|+.+ +|+|.
T Consensus       173 ~~i~v~~v~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       173 HGITVNVVCPGP-TDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             hCcEEEEEecCc-ccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence            999999999996 5565544322111            112345678999999999999998999999998 76654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-33  Score=262.84  Aligned_cols=237  Identities=30%  Similarity=0.452  Sum_probs=197.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.++.+       .....+.. +.++.++.+|+++++++++++
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   72 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE-------RVAAEILA-GGRAIAVAADVSDEADVEAAV   72 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHhc-CCeEEEEECCCCCHHHHHHHH
Confidence            3588999999999999999999999999999999999976422       23334433 567889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.......                                                       
T Consensus        73 ~~~~~~~~~~d~vi~~ag~~~~~~~-------------------------------------------------------   97 (251)
T PRK07231         73 AAALERFGSVDILVNNAGTTHRNGP-------------------------------------------------------   97 (251)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999997543221                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                         +.+.+.++|+.++++|+.+++.+++.++|+|.+++.++||++||..+..+  .++...|+.||++++.+++.++.++
T Consensus        98 ---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~y~~sk~~~~~~~~~~a~~~  172 (251)
T PRK07231         98 ---LLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP--RPGLGWYNASKGAVITLTKALAAEL  172 (251)
T ss_pred             ---hhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC--CCCchHHHHHHHHHHHHHHHHHHHh
Confidence               12678899999999999999999999999999888899999999988876  4778899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||++++|+||+ +.|++.......          ...+..++.+|+|+|+++++|+++.+.+++|+++ +|+|.
T Consensus       173 ~~~~i~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        173 GPDKIRVNAVAPVV-VETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             hhhCeEEEEEEECc-cCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence            99999999999996 455443322110          1123345679999999999999988889999988 77653

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=262.69  Aligned_cols=237  Identities=28%  Similarity=0.384  Sum_probs=197.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+|++|+++||||++|||++++++|+++|++|++++|+.+..       .+..+++. .+.++.++++|++|++++++++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~   72 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA-------ERVAAAIA-AGGRAFARQGDVGSAEAVEALV   72 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH-------HHHHHHHh-cCCeEEEEEcCCCCHHHHHHHH
Confidence            468899999999999999999999999999999999986542       22333343 4667889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||........                                                      
T Consensus        73 ~~i~~~~~~id~vi~~ag~~~~~~~~------------------------------------------------------   98 (252)
T PRK06138         73 DFVAARWGRLDVLVNNAGFGCGGTVV------------------------------------------------------   98 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcc------------------------------------------------------
Confidence            99999999999999999976543322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|+.++++|+.+++.+++.++|.|++++.++||++||..+..+  .++...|+++|++++.++++++.|+
T Consensus        99 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~  171 (252)
T PRK06138         99 -----TTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG--GRGRAAYVASKGAIASLTRAMALDH  171 (252)
T ss_pred             -----cCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC--CCCccHHHHHHHHHHHHHHHHHHHH
Confidence                 778899999999999999999999999999888899999999988766  3678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++||++++|+||+ +.|++.+......            ..+..++.+|+|+|+++++++++.+.+++|+.+ +++|++
T Consensus       172 ~~~~i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~  250 (252)
T PRK06138        172 ATDGIRVNAVAPGT-IDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGGWL  250 (252)
T ss_pred             HhcCeEEEEEEECC-ccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            99999999999996 4554433221110            112234678999999999999988889999988 776643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-33  Score=263.25  Aligned_cols=238  Identities=25%  Similarity=0.388  Sum_probs=198.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++++|+++||||++|||++++++|+++|++|++++|++++.       .+..+++...+.++.++++|+++.++++++
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   74 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA-------NAVADEINKAGGKAIGVAMDVTNEDAVNAG   74 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH-------HHHHHHHHhcCceEEEEECCCCCHHHHHHH
Confidence            3468899999999999999999999999999999999987643       345566666677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||........                                                     
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~-----------------------------------------------------  101 (262)
T PRK13394         75 IDKVAERFGSVDILVSNAGIQIVNPIE-----------------------------------------------------  101 (262)
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCchh-----------------------------------------------------
Confidence            999999999999999999976433222                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHh-HhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL-KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m-~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|+.++++|+.+++.++++++|.| ++.+.++||++||..+..+  .++...|+++|+++.+++++++.
T Consensus       102 ------~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~--~~~~~~y~~sk~a~~~~~~~la~  173 (262)
T PRK13394        102 ------NYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA--SPLKSAYVTAKHGLLGLARVLAK  173 (262)
T ss_pred             ------hCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC--CCCCcccHHHHHHHHHHHHHHHH
Confidence                  67788999999999999999999999999 7777799999999887765  36678999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHH-hcCC-----------------CcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEM-LTGG-----------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~-~~~~-----------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      ++.+.||++|+|+||+ +.+++... +...                 ...+...+.+|+|+++++++|++..+..++|+.
T Consensus       174 ~~~~~~i~v~~v~pg~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~  252 (262)
T PRK13394        174 EGAKHNVRSHVVCPGF-VRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQS  252 (262)
T ss_pred             HhhhcCeEEEEEeeCc-ccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCE
Confidence            9999999999999996 45543221 1110                 011234577999999999999998778899998


Q ss_pred             E-EehhH
Q psy6113         305 L-IDDEV  310 (406)
Q Consensus       305 i-~d~g~  310 (406)
                      + +|+|+
T Consensus       253 ~~~~~g~  259 (262)
T PRK13394        253 FVVSHGW  259 (262)
T ss_pred             EeeCCce
Confidence            8 77663

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=263.49  Aligned_cols=239  Identities=26%  Similarity=0.348  Sum_probs=198.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+++|+++||||++|||+.++++|+++|++ |++++|+.++.       ....+++...+.++.++.+|+++++++.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   74 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG-------EAQAAELEALGAKAVFVQADLSDVEDCRRV   74 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH-------HHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            4688999999999999999999999999998 99999986542       233445556677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|++|||||.......                                                      
T Consensus        75 ~~~~~~~~g~id~li~~ag~~~~~~~------------------------------------------------------  100 (260)
T PRK06198         75 VAAADEAFGRLDALVNAAGLTDRGTI------------------------------------------------------  100 (260)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCCh------------------------------------------------------
Confidence            99999999999999999997643322                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+.+.++|+.++++|+.+++.++++++|.|.+++ .++||++||..+..+  .++...|+++|+++++++++++.
T Consensus       101 -----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~  173 (260)
T PRK06198        101 -----LDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG--QPFLAAYCASKGALATLTRNAAY  173 (260)
T ss_pred             -----hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC--CCCcchhHHHHHHHHHHHHHHHH
Confidence                 2678899999999999999999999999998764 589999999988765  36778999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHH----hcCC---------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEM----LTGG---------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~----~~~~---------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      |+.+.||+||+|+||++ .|++...    +...         ...+..+..+|+|+|+++++|+++.+.+++|+++ +|+
T Consensus       174 e~~~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        174 ALLRNRIRVNGLNIGWM-ATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             HhcccCeEEEEEeeccc-cCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence            99999999999999974 4432211    1000         0123345679999999999999988889999998 888


Q ss_pred             hHHH
Q psy6113         309 EVLK  312 (406)
Q Consensus       309 g~~~  312 (406)
                      |.+.
T Consensus       253 ~~~~  256 (260)
T PRK06198        253 SVWG  256 (260)
T ss_pred             cccc
Confidence            7664

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=4.1e-34  Score=276.01  Aligned_cols=229  Identities=21%  Similarity=0.182  Sum_probs=182.4

Q ss_pred             EEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          13 FITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        13 lVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      |||||++|||+++|++|+++| ++|++++|+.++.       .+...++...+.++.++.+|+++.++++++++++.+.+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   73 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKA-------ERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG   73 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHH-------HHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            699999999999999999999 9999999986542       23344444445678889999999999999999999889


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                      +++|+||||||+......                                                          +.+.
T Consensus        74 ~~iD~lInnAG~~~~~~~----------------------------------------------------------~~~~   95 (308)
T PLN00015         74 RPLDVLVCNAAVYLPTAK----------------------------------------------------------EPTF   95 (308)
T ss_pred             CCCCEEEECCCcCCCCCC----------------------------------------------------------cCCC
Confidence            999999999997533211                                                          1267


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCC-------------------------------
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPF-------------------------------  218 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~-------------------------------  218 (406)
                      +.++|++++++|+.|++.++++++|.|++++  .|+||++||..+..+.                               
T Consensus        96 ~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (308)
T PLN00015         96 TADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMID  175 (308)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhcc
Confidence            8899999999999999999999999999876  6899999998764210                               


Q ss_pred             --ccCCchhhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHH
Q psy6113         219 --WFKNHVAYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMAD  287 (406)
Q Consensus       219 --~~~~~~~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~  287 (406)
                        .+.++.+|++||+|+..+++.+++++.+ .||+||+|+||++.+|++.+.....        ...+..+..+||+.|.
T Consensus       176 ~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~  255 (308)
T PLN00015        176 GGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGK  255 (308)
T ss_pred             ccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhh
Confidence              0124678999999999999999999975 6999999999975466554321100        0112234679999999


Q ss_pred             HHHHhhcCCCCCccceEEE
Q psy6113         288 AAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       288 ~v~~L~s~~~~~~tG~~i~  306 (406)
                      .+++|+++...+.+|+++.
T Consensus       256 ~~~~l~~~~~~~~~G~~~~  274 (308)
T PLN00015        256 RLAQVVSDPSLTKSGVYWS  274 (308)
T ss_pred             hhhhhccccccCCCccccc
Confidence            9999999877788999883

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=264.72  Aligned_cols=239  Identities=29%  Similarity=0.379  Sum_probs=196.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++++|+++||||++|||.++|++|+++|++|++++|+.++       ++...+++...+.++.++.+|++|++++++++
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~   80 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE-------LEEAAAHLEALGIDALWIAADVADEADIERLA   80 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            46789999999999999999999999999999999998654       22344555566778889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.....+..                                                      
T Consensus        81 ~~~~~~~~~id~vi~~ag~~~~~~~~------------------------------------------------------  106 (259)
T PRK08213         81 EETLERFGHVDILVNNAGATWGAPAE------------------------------------------------------  106 (259)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChh------------------------------------------------------
Confidence            99999999999999999975433222                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHH-hHhcCCCeEEEeCCCCCCCCCc--cCCchhhhHhhHHHHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPY-LKKSNHAHILNISPPLNLNPFW--FKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~-m~~~~~g~Iv~vsS~~~~~~~~--~~~~~~Y~asKaal~~l~~~la  241 (406)
                           +.+.+.|++++++|+.+++.+++++.|+ |.+++.++||++||..+..+..  .++...|+++|++++.++++++
T Consensus       107 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a  181 (259)
T PRK08213        107 -----DHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALA  181 (259)
T ss_pred             -----hCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHH
Confidence                 6788999999999999999999999998 7777778999999987765431  1245889999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .+++++||++|+|+||+ +.|++.....+.      ...+..+..+|+|+|++++||+++.+.+++|+.+ +|+|.
T Consensus       182 ~~~~~~gi~v~~v~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        182 AEWGPHGIRVNAIAPGF-FPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHhcccCEEEEEEecCc-CCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            99999999999999996 444432211110      1123455678999999999999999999999999 66653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=260.21  Aligned_cols=235  Identities=27%  Similarity=0.329  Sum_probs=189.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|+++||||++|||+++|+.|+++|++|+++.++...      ..+...+++...+.++.+++||++++++++++++++.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAA------AAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQ   75 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            3789999999999999999999999999887543321      1233455566667789999999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||.......                                                          +
T Consensus        76 ~~~~~id~li~~ag~~~~~~~----------------------------------------------------------~   97 (248)
T PRK06947         76 SAFGRLDALVNNAGIVAPSMP----------------------------------------------------------L   97 (248)
T ss_pred             HhcCCCCEEEECCccCCCCCC----------------------------------------------------------h
Confidence            999999999999997643221                                                          1


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                      .+.+.++|+.++++|+.+++.++++++|.|..++   .++||++||..+..+. ...+..|++||+++++++++++.+++
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-~~~~~~Y~~sK~~~~~~~~~la~~~~  176 (248)
T PRK06947         98 ADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS-PNEYVDYAGSKGAVDTLTLGLAKELG  176 (248)
T ss_pred             hhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-CCCCcccHhhHHHHHHHHHHHHHHhh
Confidence            2778899999999999999999999999997654   5789999999887653 12356899999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhc-------CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLT-------GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~-------~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++||+|++|+||+ +.|++.....       .....+..+..+||++|+.++||+++.+.+++|+++ +|+|
T Consensus       177 ~~~i~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        177 PHGVRVNAVRPGL-IETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             hhCcEEEEEeccC-cccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            9999999999996 5665432100       001123455679999999999999998899999998 6654

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-33  Score=260.80  Aligned_cols=235  Identities=27%  Similarity=0.406  Sum_probs=190.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+++||||++|||++++++|+++|++|++++|+..+.+       ...++   .+  ..++++|+++++++++++
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~-------~~~~~---~~--~~~~~~D~~~~~~~~~~~   70 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGK-------AAADE---VG--GLFVPTDVTDEDAVNALF   70 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-------HHHHH---cC--CcEEEeeCCCHHHHHHHH
Confidence            4588999999999999999999999999999999999765321       11122   12  257889999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||...+..                                                        
T Consensus        71 ~~~~~~~~~id~vi~~ag~~~~~~--------------------------------------------------------   94 (255)
T PRK06057         71 DTAAETYGSVDIAFNNAGISPPED--------------------------------------------------------   94 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCC--------------------------------------------------------
Confidence            999999999999999999753211                                                        


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                       .++.+.+.+.|+..+++|+.+++.+++.++|+|++++.++||++||..+..+. .+++..|++||+++.++++.++.++
T Consensus        95 -~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-~~~~~~Y~~sKaal~~~~~~l~~~~  172 (255)
T PRK06057         95 -DSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-ATSQISYTASKGGVLAMSRELGVQF  172 (255)
T ss_pred             -CCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-CCCCcchHHHHHHHHHHHHHHHHHH
Confidence             01226788899999999999999999999999998878999999998776553 2367789999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .++||+|++|+||+ +.|++........         ..+..++.+|+|+|+++.||+++.+.+++|+.+ +|+|.
T Consensus       173 ~~~gi~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        173 ARQGIRVNALCPGP-VNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HhhCcEEEEEeeCC-cCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCe
Confidence            99999999999997 4555433221110         112345689999999999999998999999998 66653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.6e-33  Score=259.17  Aligned_cols=237  Identities=24%  Similarity=0.374  Sum_probs=193.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++++|+++||||++|||+++|++|+++|++|++..++.+.      ..++..+++...+.++.++.+|+++++++.+++
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   75 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE------AAENLVNELGKEGHDVYAVQADVSKVEDANRLV   75 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH------HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            35789999999999999999999999999999876554321      122344555566778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.......                                                       
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~-------------------------------------------------------  100 (247)
T PRK12935         76 EEAVNHFGKVDILVNNAGITRDRTF-------------------------------------------------------  100 (247)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999997643322                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++++.++++|+.+++.++++++|.|.+++.++||++||..+..+  .+++..|++||+++++++++++.|+
T Consensus       101 ----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~  174 (247)
T PRK12935        101 ----KKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG--GFGQTNYSAAKAGMLGFTKSLALEL  174 (247)
T ss_pred             ----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC--CCCCcchHHHHHHHHHHHHHHHHHH
Confidence                2678899999999999999999999999999887889999999988766  3678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .+.||+++.|+||+ +.|++.......      ...+...+..|+|+++++++++++ ..+++|+.+ +++|.
T Consensus       175 ~~~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~~~~i~~g~  245 (247)
T PRK12935        175 AKTNVTVNAICPGF-IDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQQLNINGGL  245 (247)
T ss_pred             HHcCcEEEEEEeCC-CcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCCEEEeCCCc
Confidence            99999999999996 455443322110      011234567999999999999976 458999988 66653

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-33  Score=263.21  Aligned_cols=217  Identities=24%  Similarity=0.297  Sum_probs=183.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++++++||||++|||++++++|+++|++|++.+|+.++++       +..+++    .++.++.+|+++++++++++
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~-------~~~~~~----~~~~~~~~D~~~~~~~~~~~   69 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAK-------ETAAEL----GLVVGGPLDVTDPASFAAFL   69 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-------HHHHHh----ccceEEEccCCCHHHHHHHH
Confidence            4678999999999999999999999999999999999865422       222222    25778899999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||+.......                                                      
T Consensus        70 ~~~~~~~~~id~li~~ag~~~~~~~~------------------------------------------------------   95 (273)
T PRK07825         70 DAVEADLGPIDVLVNNAGVMPVGPFL------------------------------------------------------   95 (273)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCccc------------------------------------------------------
Confidence            99999999999999999987544332                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+..+  .+++..|++||+++.+|+++++.|+
T Consensus        96 -----~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~l~~el  168 (273)
T PRK07825         96 -----DEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP--VPGMATYCASKHAVVGFTDAARLEL  168 (273)
T ss_pred             -----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC--CCCCcchHHHHHHHHHHHHHHHHHh
Confidence                 778889999999999999999999999999998899999999999877  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCC
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      .+.||++++|+||+ +.|.+......   .......+|+++|+.+++++.+..
T Consensus       169 ~~~gi~v~~v~Pg~-v~t~~~~~~~~---~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        169 RGTGVHVSVVLPSF-VNTELIAGTGG---AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             hccCcEEEEEeCCc-Ccchhhccccc---ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999996 56655432211   122346799999999999997643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=8.6e-33  Score=291.73  Aligned_cols=240  Identities=26%  Similarity=0.377  Sum_probs=196.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-C-CeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-G-GNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g-~~~~~~~~Dl~~~~~v~   81 (406)
                      ...|++|+++||||++|||+++|++|+++|++|++++|+.+.++       ...+++... + .++..+.+|++++++++
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~-------~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~  481 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAE-------AVAAEINGQFGAGRAVALKMDVTDEQAVK  481 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHH-------HHHHHHHhhcCCCcEEEEECCCCCHHHHH
Confidence            45688999999999999999999999999999999999865422       233344322 2 36778999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.+|++|++|||||+....+..                                                   
T Consensus       482 ~a~~~i~~~~g~iDilV~nAG~~~~~~~~---------------------------------------------------  510 (676)
T TIGR02632       482 AAFADVALAYGGVDIVVNNAGIATSSPFE---------------------------------------------------  510 (676)
T ss_pred             HHHHHHHHhcCCCcEEEECCCCCCCCCcc---------------------------------------------------
Confidence            99999999999999999999975433322                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              +.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||..+..+  .++..+|++||++++++++++
T Consensus       511 --------~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~--~~~~~aY~aSKaA~~~l~r~l  580 (676)
T TIGR02632       511 --------ETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA--GKNASAYSAAKAAEAHLARCL  580 (676)
T ss_pred             --------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC--CCCCHHHHHHHHHHHHHHHHH
Confidence                    778899999999999999999999999998875 579999999988876  367899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhh-HHHHHH-hc----------C-------CCcccccccCChhhHHHHHHHhhcCCCCCcc
Q psy6113         241 AEEFKGDNIAVNALWPRTAIY-TAAIEM-LT----------G-------GSADAKATSRKPEIMADAAYYILSSNPPSLT  301 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~-t~~~~~-~~----------~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~t  301 (406)
                      +.|++++|||||+|+||++.+ +.++.. +.          .       ....+..+..+|+|+|++++||+++.+.++|
T Consensus       581 A~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~T  660 (676)
T TIGR02632       581 AAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTT  660 (676)
T ss_pred             HHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCc
Confidence            999999999999999997542 111100 00          0       0012345667999999999999998788999


Q ss_pred             ceEE-EehhHH
Q psy6113         302 GQFL-IDDEVL  311 (406)
Q Consensus       302 G~~i-~d~g~~  311 (406)
                      |+++ +|+|..
T Consensus       661 G~~i~vDGG~~  671 (676)
T TIGR02632       661 GCIITVDGGVP  671 (676)
T ss_pred             CcEEEECCCch
Confidence            9999 777654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=258.55  Aligned_cols=236  Identities=31%  Similarity=0.440  Sum_probs=198.6

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +++|+++||||+++||+++|++|+++|++|++++|+.++.+       +...++...+.++.++.+|+++++++++++++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   74 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA-------AAAEALQKAGGKAIGVAMDVTDEEAINAGIDY   74 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-------HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999876532       34455666677899999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|++|||||........                                                        
T Consensus        75 ~~~~~~~~d~vi~~a~~~~~~~~~--------------------------------------------------------   98 (258)
T PRK12429         75 AVETFGGVDILVNNAGIQHVAPIE--------------------------------------------------------   98 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChh--------------------------------------------------------
Confidence            999999999999999976543322                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++++.++++|+.+++.+++.++|.|++.+.++||++||..+..+  .++...|+++|+++..+++.++.|+++
T Consensus        99 ---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~~k~a~~~~~~~l~~~~~~  173 (258)
T PRK12429         99 ---DFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG--SAGKAAYVSAKHGLIGLTKVVALEGAT  173 (258)
T ss_pred             ---hCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC--CCCcchhHHHHHHHHHHHHHHHHHhcc
Confidence               678889999999999999999999999999988899999999988876  478899999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHH-hcC---C---C-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         247 DNIAVNALWPRTAIYTAAIEM-LTG---G---S-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~-~~~---~---~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      .||++++++||++ .+++... ...   .   .           ..+..++.+++|+|+++++|+++....++|+.+ +|
T Consensus       174 ~~i~v~~~~pg~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  252 (258)
T PRK12429        174 HGVTVNAICPGYV-DTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVD  252 (258)
T ss_pred             cCeEEEEEecCCC-cchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeC
Confidence            9999999999964 4443321 110   0   0           012245678999999999999887788999988 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      +|+.
T Consensus       253 ~g~~  256 (258)
T PRK12429        253 GGWT  256 (258)
T ss_pred             CCEe
Confidence            7653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9.6e-33  Score=256.86  Aligned_cols=233  Identities=23%  Similarity=0.250  Sum_probs=192.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||+++|++|+++|++|++++|+...      ...+........+.++.++.+|+++.+++.++++++.+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND------CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEE   76 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH------HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999998541      11122222333456788999999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|++|||||........                                                           
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~-----------------------------------------------------------   97 (245)
T PRK12824         77 EEGPVDILVNNAGITRDSVFK-----------------------------------------------------------   97 (245)
T ss_pred             HcCCCCEEEECCCCCCCCccc-----------------------------------------------------------
Confidence            999999999999976433322                                                           


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|+.++++|+.++++++++++|.|++.+.++||++||..+..+  .++...|++||+++++++++++.++++.||
T Consensus        98 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i  175 (245)
T PRK12824         98 RMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG--QFGQTNYSAAKAGMIGFTKALASEGARYGI  175 (245)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC--CCCChHHHHHHHHHHHHHHHHHHHHHHhCe
Confidence            778899999999999999999999999999888899999999988866  467889999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++|+|+||+ +.|++.+.....      ...+.....+|+|+++++.+|+++.+.+++|+.+ +|+|.
T Consensus       176 ~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        176 TVNCIAPGY-IATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGGL  242 (245)
T ss_pred             EEEEEEEcc-cCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence            999999997 444433221110      0123455679999999999999888889999999 66653

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=256.68  Aligned_cols=234  Identities=25%  Similarity=0.342  Sum_probs=189.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||.+++++|+++|++|++..++.+.      ......+++...+.++.++.+|+++.++++++++++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRD------AAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVD   75 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHH------HHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            5799999999999999999999999999888754321      1223445555566778899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||.......                                                          +
T Consensus        76 ~~~~~id~li~~ag~~~~~~~----------------------------------------------------------~   97 (248)
T PRK06123         76 RELGRLDALVNNAGILEAQMR----------------------------------------------------------L   97 (248)
T ss_pred             HHhCCCCEEEECCCCCCCCCC----------------------------------------------------------h
Confidence            999999999999997643221                                                          1


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCC-chhhhHhhHHHHHHHHHHHHhh
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKN-HVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~-~~~Y~asKaal~~l~~~la~e~  244 (406)
                      .+.++++|+.++++|+.+++.++++++|.|.++.   .|+||++||..+..+.  ++ +..|++||+++++|+++++.|+
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~~~  175 (248)
T PRK06123         98 EQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS--PGEYIDYAASKGAIDTMTIGLAKEV  175 (248)
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC--CCCccchHHHHHHHHHHHHHHHHHh
Confidence            2778899999999999999999999999998653   4789999999887763  33 4679999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .++||+||+|+||+ +.|++.......       ...+..+..+|+|++++++||+++.+.+++|+++ +++|
T Consensus       176 ~~~~i~v~~i~pg~-v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        176 AAEGIRVNAVRPGV-IYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             cccCeEEEEEecCc-ccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            99999999999996 555442211000       0123445678999999999999988889999988 5543

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-32  Score=255.94  Aligned_cols=230  Identities=28%  Similarity=0.412  Sum_probs=188.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCC-CCCCCCcccHHHHHHHHHHcC--CeeeeeeecCCChHHHHHHHHHHH
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTA-EPHPKLPGTIYSAAKEVEDAG--GNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~-~~~~~~~~~i~~~~~~~~~~g--~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      ++||||++|||+++++.|+++|++|++++|+. +.       +++..+++....  ..+..+.+|++++++++++++++.
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAG-------LDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAA   74 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchH-------HHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHH
Confidence            79999999999999999999999999999983 32       223344444332  235568899999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||........                                                          
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~----------------------------------------------------------   96 (251)
T PRK07069         75 DAMGGLSVLVNNAGVGSFGAIE----------------------------------------------------------   96 (251)
T ss_pred             HHcCCccEEEECCCcCCCCChh----------------------------------------------------------
Confidence            9999999999999976543322                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+  .+++..|+++|++++.++++++.|+++++
T Consensus        97 -~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  173 (251)
T PRK07069         97 -QIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA--EPDYTAYNASKAAVASLTKSIALDCARRG  173 (251)
T ss_pred             -hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC--CCCCchhHHHHHHHHHHHHHHHHHhcccC
Confidence             778899999999999999999999999999888899999999998876  37788999999999999999999998765


Q ss_pred             --eEEEEecchhhhhHHHHHHhcC----C-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         249 --IAVNALWPRTAIYTAAIEMLTG----G-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       249 --I~vn~v~PG~~~~t~~~~~~~~----~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                        |+||+|+||+ +.|++......    .       ...+..+..+|+|+|+.++||+++.+.++||+.+ +|+|.
T Consensus       174 ~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        174 LDVRCNSIHPTF-IRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGGI  248 (251)
T ss_pred             CcEEEEEEeecc-cCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCe
Confidence              9999999996 55555432111    0       0112345678999999999999998899999998 66653

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-32  Score=254.43  Aligned_cols=237  Identities=26%  Similarity=0.352  Sum_probs=189.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++...+|+++||||++|||++++++|+++|++|++++++...      .......++...+.++.++.+|++|.+++.++
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRD------EAEALAAEIRALGRRAVALQADLADEAEVRAL   77 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            445679999999999999999999999999999887765321      12234455555577888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+..                                                     
T Consensus        78 ~~~~~~~~~~iD~vi~~ag~~~~~~~~-----------------------------------------------------  104 (258)
T PRK09134         78 VARASAALGPITLLVNNASLFEYDSAA-----------------------------------------------------  104 (258)
T ss_pred             HHHHHHHcCCCCEEEECCcCCCCCccc-----------------------------------------------------
Confidence            999999999999999999976543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.+++.++++++|+|.++..++||+++|..+..+  .+++..|++||+++++++++++.+
T Consensus       105 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~--~p~~~~Y~~sK~a~~~~~~~la~~  176 (258)
T PRK09134        105 ------SFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL--NPDFLSYTLSKAALWTATRTLAQA  176 (258)
T ss_pred             ------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC--CCCchHHHHHHHHHHHHHHHHHHH
Confidence                  778899999999999999999999999999887899999999877655  356778999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHH--HHHhc-CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAA--IEMLT-GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~--~~~~~-~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.+. |+||+|+||++.+...  ...+. .....+..+..+|+|+|++++++++.  .+++|+.+ +++|.
T Consensus       177 ~~~~-i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~g~~~~i~gg~  244 (258)
T PRK09134        177 LAPR-IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDA--PSVTGQMIAVDGGQ  244 (258)
T ss_pred             hcCC-cEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCCEEEECCCe
Confidence            9876 9999999996432110  00000 00112334567899999999999973  57899988 66654

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=253.89  Aligned_cols=229  Identities=24%  Similarity=0.330  Sum_probs=189.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.       .+..+++...+.++.++.+|+++++++.++++.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-------EALAAELRSTGVKAAAYSIDLSNPEAIAPGIAEL   77 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987542       2344555555678889999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .++++++|++|||||.....+.                                                          
T Consensus        78 ~~~~~~id~lv~~ag~~~~~~~----------------------------------------------------------   99 (241)
T PRK07454         78 LEQFGCPDVLINNAGMAYTGPL----------------------------------------------------------   99 (241)
T ss_pred             HHHcCCCCEEEECCCccCCCch----------------------------------------------------------
Confidence            9999999999999997643322                                                          


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                       .+.+.++|+.++++|+.+++.+++.++|+|.+++.++||++||..+..+  .+++..|++||++++.++++++.|++++
T Consensus       100 -~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~~~~~~~~~~a~e~~~~  176 (241)
T PRK07454        100 -LEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA--FPQWGAYCVSKAALAAFTKCLAEEERSH  176 (241)
T ss_pred             -hhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC--CCCccHHHHHHHHHHHHHHHHHHHhhhh
Confidence             2678889999999999999999999999999888899999999988766  4778899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ||++|+|.||+ +.|++.............+..+|+++|+++++|++++...+.+..-
T Consensus       177 gi~v~~i~pg~-i~t~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~  233 (241)
T PRK07454        177 GIRVCTITLGA-VNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLT  233 (241)
T ss_pred             CCEEEEEecCc-ccCCcccccccccccccccCCCHHHHHHHHHHHHcCCccceeeeEE
Confidence            99999999996 5565432111111111234579999999999999977666655543

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=255.46  Aligned_cols=238  Identities=28%  Similarity=0.396  Sum_probs=192.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+++++|+++||||++|||++++++|+++|++|++++|+.+..       ....+++...+.++.++.+|+++.++++++
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA-------ERVAKQIVADGGTAIAVQVDVSDPDSAKAM   73 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            4568899999999999999999999999999999999986532       234445555556778899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+......                                                      
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~------------------------------------------------------   99 (250)
T PRK07774         74 ADATVSAFGGIDYLVNNAAIYGGMKL------------------------------------------------------   99 (250)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCC------------------------------------------------------
Confidence            99999999999999999998642111                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                        .++.+.+.++|++++++|+.+++.++++++|+|.+.+.++||++||..++.+     ...|++||++++.++++++++
T Consensus       100 --~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~Y~~sK~a~~~~~~~l~~~  172 (250)
T PRK07774        100 --DLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-----SNFYGLAKVGLNGLTQQLARE  172 (250)
T ss_pred             --CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-----ccccHHHHHHHHHHHHHHHHH
Confidence              1122678899999999999999999999999999888899999999877643     468999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.+.||++++++||. +.|++.....+..       ..+..+..+|+|+|+.+++++++.....+|+.+ +++|.
T Consensus       173 ~~~~~i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~  246 (250)
T PRK07774        173 LGGMNIRVNAIAPGP-IDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQ  246 (250)
T ss_pred             hCccCeEEEEEecCc-ccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCe
Confidence            999999999999996 5554432211100       012234568999999999999876667899988 66553

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-32  Score=259.61  Aligned_cols=214  Identities=24%  Similarity=0.290  Sum_probs=177.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++           +++...  .+.++.+|++|++++++++++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-----------~~~~~~--~~~~~~~Dv~~~~~~~~~~~~   67 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-----------EDLASL--GVHPLSLDVTDEASIKAAVDT   67 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----------HHHHhC--CCeEEEeeCCCHHHHHHHHHH
Confidence            3579999999999999999999999999999999986532           222222  377889999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|+||||||+....+..                                                        
T Consensus        68 ~~~~~~~id~li~~ag~~~~~~~~--------------------------------------------------------   91 (273)
T PRK06182         68 IIAEEGRIDVLVNNAGYGSYGAIE--------------------------------------------------------   91 (273)
T ss_pred             HHHhcCCCCEEEECCCcCCCCchh--------------------------------------------------------
Confidence            999999999999999986443332                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|+.++++|+.+++.+++.++|.|++++.|+||++||..+..+.  +....|++||+++++|+++++.|+++
T Consensus        92 ---~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~--~~~~~Y~~sKaa~~~~~~~l~~e~~~  166 (273)
T PRK06182         92 ---DVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT--PLGAWYHATKFALEGFSDALRLEVAP  166 (273)
T ss_pred             ---hCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC--CCccHhHHHHHHHHHHHHHHHHHhcc
Confidence               7889999999999999999999999999999888999999998876653  56678999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhc----CCC-c-----------------ccccccCChhhHHHHHHHhhcC
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLT----GGS-A-----------------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~----~~~-~-----------------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +||+||+|+||+ +.|++.....    ... .                 .+..+..+|+++|++++++++.
T Consensus       167 ~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        167 FGIDVVVIEPGG-IKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             cCCEEEEEecCC-cccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence            999999999996 5565432110    000 0                 0123567999999999999974

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=2.2e-32  Score=253.90  Aligned_cols=233  Identities=22%  Similarity=0.261  Sum_probs=191.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|+++.|....      ...+...++...+.++.++.+|++++++++++++.+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEE------RAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEA   74 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            789999999999999999999999999998883211      12223334444566888999999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|++|||||.......                                                           .
T Consensus        75 ~~~~id~vi~~ag~~~~~~~-----------------------------------------------------------~   95 (242)
T TIGR01829        75 ELGPIDVLVNNAGITRDATF-----------------------------------------------------------K   95 (242)
T ss_pred             HcCCCcEEEECCCCCCCCCh-----------------------------------------------------------h
Confidence            99999999999997643322                                                           2


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|+.++++|+.+++.++++++|.|++.+.++||++||..+..+  .+++..|+++|+++..++++++.|+.+.||
T Consensus        96 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sk~a~~~~~~~la~~~~~~~i  173 (242)
T TIGR01829        96 KMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG--QFGQTNYSAAKAGMIGFTKALAQEGATKGV  173 (242)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC--CCCcchhHHHHHHHHHHHHHHHHHhhhhCe
Confidence            678889999999999999999999999999888889999999988766  367889999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++|+++||++ .|++.....+.      ...+..+..+|+++++.+.||+++++.+++|+.+ +|+|.
T Consensus       174 ~v~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       174 TVNTISPGYI-ATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             EEEEEeeCCC-cCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            9999999964 44332211110      0123456679999999999999988889999999 77764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=266.64  Aligned_cols=221  Identities=19%  Similarity=0.250  Sum_probs=176.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.+       +..+++.    ++.++.+|++|.++++++
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~-------~~~~~l~----~v~~~~~Dl~d~~~v~~~   89 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR-------EALAGID----GVEVVMLDLADLESVRAF   89 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHhh----hCeEEEccCCCHHHHHHH
Confidence            35678999999999999999999999999999999999865422       2233332    377889999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....  .                                                     
T Consensus        90 ~~~~~~~~~~iD~li~nAg~~~~~--~-----------------------------------------------------  114 (315)
T PRK06196         90 AERFLDSGRRIDILINNAGVMACP--E-----------------------------------------------------  114 (315)
T ss_pred             HHHHHhcCCCCCEEEECCCCCCCC--C-----------------------------------------------------
Confidence            999999999999999999975321  1                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC----------CccCCchhhhHhhHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP----------FWFKNHVAYTISKYGM  233 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~----------~~~~~~~~Y~asKaal  233 (406)
                            +.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+          .+++++..|++||+++
T Consensus       115 ------~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~  188 (315)
T PRK06196        115 ------TRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTAN  188 (315)
T ss_pred             ------ccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHH
Confidence                  455678999999999999999999999999887789999999755321          1134567899999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC----------cccc-cccCChhhHHHHHHHhhcCCC
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS----------ADAK-ATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~----------~~~~-~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      ..+++.++.+++++||+||+|+||+ +.|++.+......          ..+. .+..+|+++|.+++||++...
T Consensus       189 ~~~~~~la~~~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        189 ALFAVHLDKLGKDQGVRAFSVHPGG-ILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             HHHHHHHHHHhcCCCcEEEEeeCCc-ccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence            9999999999999999999999996 5555432221100          0111 146789999999999997543

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=258.26  Aligned_cols=238  Identities=23%  Similarity=0.295  Sum_probs=195.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +|++|+++||||++|||++++++|+++|++|++++|+.++.+       ...+++...  +.++.++.+|++++++++++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLA-------AAAEEIEALKGAGAVRYEPADVTDEDQVARA   76 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH-------HHHHHHHhccCCCceEEEEcCCCCHHHHHHH
Confidence            578999999999999999999999999999999999865422       233334333  35788899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.......                                                      
T Consensus        77 ~~~~~~~~~~~d~li~~ag~~~~~~~------------------------------------------------------  102 (276)
T PRK05875         77 VDAATAWHGRLHGVVHCAGGSETIGP------------------------------------------------------  102 (276)
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCC------------------------------------------------------
Confidence            99999999999999999996532111                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          +.+.+.++|..++++|+.+++.+++++++.|.+++.++||++||..+..+  .++...|+++|++++.++++++.+
T Consensus       103 ----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~  176 (276)
T PRK05875        103 ----ITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT--HRWFGAYGVTKSAVDHLMKLAADE  176 (276)
T ss_pred             ----hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC--CCCCcchHHHHHHHHHHHHHHHHH
Confidence                12678889999999999999999999999999887889999999988766  366789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +...+|++|+|+||+ +.|++.......        ...+..+..+|+|+|++++||+++...+++|+++ +++|..
T Consensus       177 ~~~~~i~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  252 (276)
T PRK05875        177 LGPSWVRVNSIRPGL-IRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHM  252 (276)
T ss_pred             hcccCeEEEEEecCc-cCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCee
Confidence            999999999999996 455443221111        1123456678999999999999988888999988 666643

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=260.68  Aligned_cols=223  Identities=22%  Similarity=0.263  Sum_probs=183.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+.+.+       ++..+++...+.++.++.+|++|.+++.++
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l-------~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~  107 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLL-------DAVADRITRAGGDAMAVPCDLSDLDAVDAL  107 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            4568899999999999999999999999999999999986542       344555666677888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||+.......+                                                    
T Consensus       108 ~~~~~~~~g~id~li~~AG~~~~~~~~~----------------------------------------------------  135 (293)
T PRK05866        108 VADVEKRIGGVDILINNAGRSIRRPLAE----------------------------------------------------  135 (293)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcchhh----------------------------------------------------
Confidence            9999999999999999999865433210                                                    


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           ...++++++.++++|+.|++.++++++|+|++++.++||++||.++.... .++...|++||+|+++|+++++.|
T Consensus       136 -----~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-~p~~~~Y~asKaal~~l~~~la~e  209 (293)
T PRK05866        136 -----SLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA-SPLFSVYNASKAALSAVSRVIETE  209 (293)
T ss_pred             -----ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-CCCcchHHHHHHHHHHHHHHHHHH
Confidence                 01246788999999999999999999999999888999999997665421 367789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcC
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++++||+|++|+||+ ++|++.+....   .......+|+++|+.++..+..
T Consensus       210 ~~~~gI~v~~v~pg~-v~T~~~~~~~~---~~~~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        210 WGDRGVHSTTLYYPL-VATPMIAPTKA---YDGLPALTADEAAEWMVTAART  257 (293)
T ss_pred             hcccCcEEEEEEcCc-ccCcccccccc---ccCCCCCCHHHHHHHHHHHHhc
Confidence            999999999999995 66655432111   1112346999999999888864

>KOG4169|consensus

Probab=100.00  E-value=6.3e-33  Score=244.06  Aligned_cols=226  Identities=22%  Similarity=0.330  Sum_probs=186.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++++||+|++||+.+|||++++++|+++|..+.++..+.|..+        +..++++.  ...+.|++||+++..++++
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~--------a~akL~ai~p~~~v~F~~~DVt~~~~~~~   72 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE--------AIAKLQAINPSVSVIFIKCDVTNRGDLEA   72 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH--------HHHHHhccCCCceEEEEEeccccHHHHHH
Confidence            4688999999999999999999999999998877776666532        33444443  4578999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      .++++...||.||++|||||+..                                                         
T Consensus        73 ~f~ki~~~fg~iDIlINgAGi~~---------------------------------------------------------   95 (261)
T KOG4169|consen   73 AFDKILATFGTIDILINGAGILD---------------------------------------------------------   95 (261)
T ss_pred             HHHHHHHHhCceEEEEccccccc---------------------------------------------------------
Confidence            99999999999999999999752                                                         


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                                ..+|++++.+|+.|.++-+..++|+|.+++   +|-|||+||..++.|  .+-.+.|++||+++.+|||+
T Consensus        96 ----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P--~p~~pVY~AsKaGVvgFTRS  163 (261)
T KOG4169|consen   96 ----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP--MPVFPVYAASKAGVVGFTRS  163 (261)
T ss_pred             ----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc--cccchhhhhcccceeeeehh
Confidence                      456999999999999999999999998864   579999999999988  57889999999999999999


Q ss_pred             HHHhh--cCCCeEEEEecchhhhhHHHHHHhcCCCcc-----------cccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         240 MAEEF--KGDNIAVNALWPRTAIYTAAIEMLTGGSAD-----------AKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       240 la~e~--~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~-----------~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      ||.+.  .+.||++|+||||+ +.|.+.+.+.....-           ......+|+++|..++.+...   ..+|+.. 
T Consensus       164 la~~ayy~~sGV~~~avCPG~-t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~---~~NGaiw~  239 (261)
T KOG4169|consen  164 LADLAYYQRSGVRFNAVCPGF-TRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY---PKNGAIWK  239 (261)
T ss_pred             hhhhhhHhhcCEEEEEECCCc-chHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh---ccCCcEEE
Confidence            98764  56799999999995 777777776432110           112245789999998888854   5789887 


Q ss_pred             EehhHH
Q psy6113         306 IDDEVL  311 (406)
Q Consensus       306 ~d~g~~  311 (406)
                      ++.|.+
T Consensus       240 v~~g~l  245 (261)
T KOG4169|consen  240 VDSGSL  245 (261)
T ss_pred             EecCcE
Confidence            666654

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.9e-32  Score=265.39  Aligned_cols=216  Identities=19%  Similarity=0.227  Sum_probs=170.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .|++++||||++|||+++|++|+++|++|++++|+.+++       ++..+++...  +.++..+.+|+++  ++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l-------~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~  122 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKL-------KDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVK  122 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHH-------HHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHH
Confidence            689999999999999999999999999999999987653       3455556543  3478888999985  3344455


Q ss_pred             HHHHhcCC--ccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          86 AAVDKFGG--IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        86 ~i~~~~g~--iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+++  +|+||||||+.....                                                       
T Consensus       123 ~l~~~~~~~didilVnnAG~~~~~~-------------------------------------------------------  147 (320)
T PLN02780        123 RIKETIEGLDVGVLINNVGVSYPYA-------------------------------------------------------  147 (320)
T ss_pred             HHHHHhcCCCccEEEEecCcCCCCC-------------------------------------------------------
Confidence            55555554  669999999764311                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                        .++.+.+.+++++++++|+.|++.++++++|.|.+++.|+||++||..+......++...|++||+++++|+++|+.|
T Consensus       148 --~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~E  225 (320)
T PLN02780        148 --RFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVE  225 (320)
T ss_pred             --cccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence              012378899999999999999999999999999998889999999998864211367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcC
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++++||+|++|+||+ +.|++....  .   ......+|+++|+.++..+..
T Consensus       226 l~~~gI~V~~v~PG~-v~T~~~~~~--~---~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        226 YKKSGIDVQCQVPLY-VATKMASIR--R---SSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HhccCeEEEEEeeCc-eecCccccc--C---CCCCCCCHHHHHHHHHHHhCC
Confidence            999999999999996 667554311  1   111245899999999988853

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.9e-32  Score=265.13  Aligned_cols=234  Identities=20%  Similarity=0.161  Sum_probs=181.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++.       ++..+++...+.++.++.+|+++.+++++++++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   74 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKA-------EQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQ   74 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHH-------HHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHH
Confidence            47899999999999999999999999 9999999987642       234445544456788899999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|+||||||+..+...                                                         
T Consensus        75 ~~~~~~~iD~lI~nAG~~~~~~~---------------------------------------------------------   97 (314)
T TIGR01289        75 FRESGRPLDALVCNAAVYFPTAK---------------------------------------------------------   97 (314)
T ss_pred             HHHhCCCCCEEEECCCccccCcc---------------------------------------------------------
Confidence            99989999999999997532111                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCC--------------------------
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPF--------------------------  218 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~--------------------------  218 (406)
                       ..+.+.++|+.++++|+.+++.++++++|+|++++  .++||++||..+..+.                          
T Consensus        98 -~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (314)
T TIGR01289        98 -EPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIA  176 (314)
T ss_pred             -ccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCccc
Confidence             01567899999999999999999999999998764  5899999998764210                          


Q ss_pred             -----ccCCchhhhHhhHHHHHHHHHHHHhhc-CCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhh
Q psy6113         219 -----WFKNHVAYTISKYGMSMCALGMAEEFK-GDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEI  284 (406)
Q Consensus       219 -----~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~  284 (406)
                           .+.++.+|++||+|+..+++.+++++. ++||+|++|+||++.+|++.+......        ........+|++
T Consensus       177 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (314)
T TIGR01289       177 MIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEE  256 (314)
T ss_pred             ccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhh
Confidence                 123457899999999999999999985 469999999999754565532211000        000122568999


Q ss_pred             HHHHHHHhhcCCCCCccceEEE
Q psy6113         285 MADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       285 vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      .|..+++++.+.....+|.++.
T Consensus       257 ~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       257 AGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             hhhhhHHhhcCcccCCCceeee
Confidence            9999999887644445676663

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-32  Score=253.34  Aligned_cols=241  Identities=23%  Similarity=0.330  Sum_probs=192.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|++++++||||++|||+++++.|+++|++|++++|+.++       +....+++...+.++.++++|++++++++++++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEK-------LEEAVAECGALGTEVRGYAANVTDEEDVEATFA   74 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            5889999999999999999999999999999999998754       234455566667788999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+.+.++++|++|||||..........                                                   ..
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~---------------------------------------------------~~  103 (253)
T PRK08217         75 QIAEDFGQLNGLINNAGILRDGLLVKA---------------------------------------------------KD  103 (253)
T ss_pred             HHHHHcCCCCEEEECCCccCcCccccc---------------------------------------------------cc
Confidence            999989999999999997543221100                                                   00


Q ss_pred             CCC-CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         166 TDT-ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       166 ~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                      ..+ .+.+.++|..++++|+.+++.+.+.++|.|.++ ..++||++||.... +  .++...|++||+|+++++++++.|
T Consensus       104 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-~--~~~~~~Y~~sK~a~~~l~~~la~~  180 (253)
T PRK08217        104 GKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-G--NMGQTNYSASKAGVAAMTVTWAKE  180 (253)
T ss_pred             ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-C--CCCCchhHHHHHHHHHHHHHHHHH
Confidence            111 377889999999999999999999999999876 45789999997543 3  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.++||++++++||+ +.|++.....+.      ...+..+..+|+|+|+++.+|++  +.+++|+.+ +++|+
T Consensus       181 ~~~~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~g~~~~~~gg~  251 (253)
T PRK08217        181 LARYGIRVAAIAPGV-IETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIE--NDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHcCcEEEEEeeCC-CcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc--CCCcCCcEEEeCCCc
Confidence            999999999999996 444433221110      01233456799999999999995  358899999 66654

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.4e-32  Score=283.95  Aligned_cols=224  Identities=24%  Similarity=0.284  Sum_probs=189.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..+++++++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  383 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAA-------AERTAELIRAAGAVAHAYRVDVSDADAMEAFA  383 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            46788999999999999999999999999999999998754       23455666667788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|+||||||+.......                                                      
T Consensus       384 ~~~~~~~g~id~lv~~Ag~~~~~~~~------------------------------------------------------  409 (582)
T PRK05855        384 EWVRAEHGVPDIVVNNAGIGMAGGFL------------------------------------------------------  409 (582)
T ss_pred             HHHHHhcCCCcEEEECCccCCCCCcc------------------------------------------------------
Confidence            99999999999999999986544333                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +.+.++|+.++++|+.|++.++++++|+|++++ .|+||++||.++..+  .++...|++||+|+++++++++.|
T Consensus       410 -----~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~~e  482 (582)
T PRK05855        410 -----DTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP--SRSLPAYATSKAAVLMLSECLRAE  482 (582)
T ss_pred             -----cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC--CCCCcHHHHHHHHHHHHHHHHHHH
Confidence                 788999999999999999999999999999876 489999999999877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--c------------ccccccCChhhHHHHHHHhhcCCC
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--A------------DAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--~------------~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      ++++||+||+|+||+ ++|++.+......  .            ....+..+||++|+.++++++...
T Consensus       483 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        483 LAAAGIGVTAICPGF-VDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             hcccCcEEEEEEeCC-CcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence            999999999999996 6675544321100  0            011233589999999999997533

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=263.42  Aligned_cols=235  Identities=20%  Similarity=0.226  Sum_probs=179.4

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v   80 (406)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+.++.+       ++.+++...  +.++.++.+|+++.+++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~-------~~~~~l~~~~~~~~v~~~~~Dl~d~~sv   80 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGE-------AAVAAIRTAVPDAKLSLRALDLSSLASV   80 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHHHhCCCCceEEEEecCCCHHHH
Confidence            457899999999999999999999999999999999999876533       344445433  34688999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.+++||+||||||+.... .                                                   
T Consensus        81 ~~~~~~~~~~~~~iD~li~nAG~~~~~-~---------------------------------------------------  108 (313)
T PRK05854         81 AALGEQLRAEGRPIHLLINNAGVMTPP-E---------------------------------------------------  108 (313)
T ss_pred             HHHHHHHHHhCCCccEEEECCccccCC-c---------------------------------------------------
Confidence            999999999999999999999986431 1                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------ccCCchhhhHhh
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------WFKNHVAYTISK  230 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------~~~~~~~Y~asK  230 (406)
                              .+.+.++|+.++++|+.|++.+++.++|.|+++ .++||++||..+..+.          .++++..|+.||
T Consensus       109 --------~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK  179 (313)
T PRK05854        109 --------RQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSK  179 (313)
T ss_pred             --------cccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHH
Confidence                    156778899999999999999999999999876 5899999998775431          124567899999


Q ss_pred             HHHHHHHHHHHHhh--cCCCeEEEEecchhhhhHHHHHHhcCCC---c----cc-------ccccCChhhHHHHHHHhhc
Q psy6113         231 YGMSMCALGMAEEF--KGDNIAVNALWPRTAIYTAAIEMLTGGS---A----DA-------KATSRKPEIMADAAYYILS  294 (406)
Q Consensus       231 aal~~l~~~la~e~--~~~gI~vn~v~PG~~~~t~~~~~~~~~~---~----~~-------~~~~~~pe~vA~~v~~L~s  294 (406)
                      +|+.+|++.|++++  .++||+||+|+||+ +.|.+........   .    ..       .....+|++.|...++++.
T Consensus       180 ~a~~~~~~~la~~~~~~~~gI~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~  258 (313)
T PRK05854        180 IAVGLFALELDRRSRAAGWGITSNLAHPGV-APTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAAT  258 (313)
T ss_pred             HHHHHHHHHHHHHhhcCCCCeEEEEEecce-eccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheee
Confidence            99999999999864  46789999999996 5665432211000   0    00       0013467777777777765


Q ss_pred             CCCCCccceEEEe
Q psy6113         295 SNPPSLTGQFLID  307 (406)
Q Consensus       295 ~~~~~~tG~~i~d  307 (406)
                      ++. ..+|.++.+
T Consensus       259 ~~~-~~~g~~~~~  270 (313)
T PRK05854        259 SPD-AEGGAFYGP  270 (313)
T ss_pred             CCC-CCCCcEECC
Confidence            422 224555533

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-32  Score=251.93  Aligned_cols=240  Identities=28%  Similarity=0.428  Sum_probs=195.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++++++++||||++|||+++|+.|+++|++|++++|...+..+   ...+..+++...+.++.++.+|+++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRA---EADAVAAGIEAAGGKALGLAFDVRDFAATRAAL   78 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            34778999999999999999999999999999998875443221   233344555566778899999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||........                                                      
T Consensus        79 ~~~~~~~~~~d~vi~~ag~~~~~~~~------------------------------------------------------  104 (249)
T PRK12827         79 DAGVEEFGRLDILVNNAGIATDAAFA------------------------------------------------------  104 (249)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcc------------------------------------------------------
Confidence            99999999999999999976543332                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhh-HHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCL-PYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~-p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +.+.++|...+++|+.+++.+++++. |.|++++.++||++||..+..+  .+++..|+++|++++.++++++.+
T Consensus       105 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~y~~sK~a~~~~~~~l~~~  177 (249)
T PRK12827        105 -----ELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG--NRGQVNYAASKAGLIGLTKTLANE  177 (249)
T ss_pred             -----cCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC--CCCCchhHHHHHHHHHHHHHHHHH
Confidence                 77888999999999999999999999 6777677789999999988876  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC----CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +++.||++++|+||+ +.|++.......    ...+..+..+|+++|+.+++|+++.+.+++|+++ +|+|
T Consensus       178 ~~~~~i~~~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        178 LAPRGITVNAVAPGA-INTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             hhhhCcEEEEEEECC-cCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            999999999999996 555432211110    0112344568999999999999988889999998 6665

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=3.5e-32  Score=252.01  Aligned_cols=227  Identities=23%  Similarity=0.285  Sum_probs=178.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++||||++|||+++|++|+++|  +.|++..|+...  +             ..+.++.++++|+++.++++++    
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~-------------~~~~~~~~~~~Dls~~~~~~~~----   61 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D-------------FQHDNVQWHALDVTDEAEIKQL----   61 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c-------------cccCceEEEEecCCCHHHHHHH----
Confidence            479999999999999999999986  566666665432  0             1134678899999999998874    


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.++++|++|||||........                                                     +..+
T Consensus        62 ~~~~~~id~li~~aG~~~~~~~~-----------------------------------------------------~~~~   88 (235)
T PRK09009         62 SEQFTQLDWLINCVGMLHTQDKG-----------------------------------------------------PEKS   88 (235)
T ss_pred             HHhcCCCCEEEECCccccccccC-----------------------------------------------------cccc
Confidence            45578999999999987542211                                                     1122


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC-CccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP-FWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~-~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                      +.+.+.+.|...+++|+.+++.+++.++|+|++++.++|+++||..+... ...+++..|++||+++++|+++|+.|+++
T Consensus        89 ~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~  168 (235)
T PRK09009         89 LQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQR  168 (235)
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhc
Confidence            34788899999999999999999999999999887789999998665322 12356789999999999999999999986


Q ss_pred             --CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         247 --DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       247 --~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                        .+|+||+|+||+ ++|++.......  .+..+..+|+|+|+.+++|+++..++++|+++ +++++.
T Consensus       169 ~~~~i~v~~v~PG~-v~t~~~~~~~~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        169 SLKHGVVLALHPGT-TDTALSKPFQQN--VPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             ccCCeEEEEEcccc-eecCCCcchhhc--cccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcCC
Confidence              699999999996 566554332221  23455679999999999999998889999999 776553

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.9e-32  Score=250.83  Aligned_cols=237  Identities=32%  Similarity=0.443  Sum_probs=196.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++|.+|+++||||++|||++++++|+++|++|+++ +|+.++.       ....+.+...+.++.++.+|++++++++++
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA-------QELLEEIKEEGGDAIAVKADVSSEEDVENL   73 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH-------HHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            35789999999999999999999999999999998 8876542       233444555567789999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|++|||||.......                                                      
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~------------------------------------------------------   99 (247)
T PRK05565         74 VEQIVEKFGKIDILVNNAGISNFGLV------------------------------------------------------   99 (247)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCCh------------------------------------------------------
Confidence            99999999999999999997633222                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|+.++++|+.+++.+++.++|.+.+++.+++|++||..+..+.  +....|+++|++++.++++++.+
T Consensus       100 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~--~~~~~y~~sK~a~~~~~~~~~~~  172 (247)
T PRK05565        100 -----TDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA--SCEVLYSASKGAVNAFTKALAKE  172 (247)
T ss_pred             -----hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC--CCccHHHHHHHHHHHHHHHHHHH
Confidence                 26788999999999999999999999999998888999999999887763  67789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.+.||++++|+||+ +.|.+.+......      ..+..+..+|+++|+.+++|+++.+..++|+++ +|+|+
T Consensus       173 ~~~~gi~~~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        173 LAPSGIRVNAVAPGA-IDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HHHcCeEEEEEEECC-ccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence            999999999999996 4443332221100      112345679999999999999998899999999 66653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-31  Score=249.38  Aligned_cols=231  Identities=25%  Similarity=0.351  Sum_probs=192.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCC--ChHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIR--DEHAVQ   81 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~--~~~~v~   81 (406)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.++.       ....+++...+ .++.++.+|++  ++++++
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~   80 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL-------EAVYDEIEAAGGPQPAIIPLDLLTATPQNYQ   80 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHH-------HHHHHHHHhcCCCCceEEEecccCCCHHHHH
Confidence            467899999999999999999999999999999999987542       23344454443 35667777775  889999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++.+.+.++++|+||||||......                                                     
T Consensus        81 ~~~~~~~~~~~~id~vi~~Ag~~~~~~-----------------------------------------------------  107 (247)
T PRK08945         81 QLADTIEEQFGRLDGVLHNAGLLGELG-----------------------------------------------------  107 (247)
T ss_pred             HHHHHHHHHhCCCCEEEECCcccCCCC-----------------------------------------------------
Confidence            999999999999999999999754321                                                     


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                           ++.+.+.++|+..+++|+.+++.++++++|+|++++.++||++||..+..+  .+++..|++||++++.+++.++
T Consensus       108 -----~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~  180 (247)
T PRK08945        108 -----PMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG--RANWGAYAVSKFATEGMMQVLA  180 (247)
T ss_pred             -----CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC--CCCCcccHHHHHHHHHHHHHHH
Confidence                 112677889999999999999999999999999988899999999988876  3678899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      .++...||++++++||+ +.|++.....+.  .......+|+|+++.++|++++.+.+++|+++
T Consensus       181 ~~~~~~~i~~~~v~pg~-v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  241 (247)
T PRK08945        181 DEYQGTNLRVNCINPGG-TRTAMRASAFPG--EDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSF  241 (247)
T ss_pred             HHhcccCEEEEEEecCC-ccCcchhhhcCc--ccccCCCCHHHHHHHHHHHhCccccccCCeEE
Confidence            99999999999999996 555443322222  12345789999999999999998999999987

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.7e-32  Score=272.75  Aligned_cols=232  Identities=23%  Similarity=0.284  Sum_probs=190.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .++||+++||||++|||+++|++|+++|++|++++|....        +...+.....+  ..++.+|+++.++++++++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--------~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~  276 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--------EALAAVANRVG--GTALALDITAPDAPARIAE  276 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--------HHHHHHHHHcC--CeEEEEeCCCHHHHHHHHH
Confidence            4679999999999999999999999999999999885321        11112222223  3467899999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+.+.++++|++|||||+......                                                        
T Consensus       277 ~~~~~~g~id~vi~~AG~~~~~~~--------------------------------------------------------  300 (450)
T PRK08261        277 HLAERHGGLDIVVHNAGITRDKTL--------------------------------------------------------  300 (450)
T ss_pred             HHHHhCCCCCEEEECCCcCCCCCh--------------------------------------------------------
Confidence            999999999999999998654332                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|+.++++|+.+++++.++++|.+..++.++||++||..+..+  .+++..|+++|+++++|+++++.|++
T Consensus       301 ---~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g--~~~~~~Y~asKaal~~~~~~la~el~  375 (450)
T PRK08261        301 ---ANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG--NRGQTNYAASKAGVIGLVQALAPLLA  375 (450)
T ss_pred             ---hhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC--CCCChHHHHHHHHHHHHHHHHHHHHh
Confidence               2788999999999999999999999999766666799999999998876  37889999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++||++|+|+||+ ++|.+.......      ...+..+...|+|+|+++.||+++.+.++||+++ +|++
T Consensus       376 ~~gi~v~~v~PG~-i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        376 ERGITINAVAPGF-IETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             hhCcEEEEEEeCc-CcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            9999999999996 566554332210      1112345578999999999999998999999999 6554

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=248.02  Aligned_cols=221  Identities=24%  Similarity=0.284  Sum_probs=182.5

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+...                  ...++.+|+++.+++++++++
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~------------------~~~~~~~D~~~~~~~~~~~~~   62 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF------------------PGELFACDLADIEQTAATLAQ   62 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc------------------CceEEEeeCCCHHHHHHHHHH
Confidence            35799999999999999999999999999999999865310                  114678999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.+ ++|++|||||.....+.                                                         
T Consensus        63 ~~~~~-~~d~vi~~ag~~~~~~~---------------------------------------------------------   84 (234)
T PRK07577         63 INEIH-PVDAIVNNVGIALPQPL---------------------------------------------------------   84 (234)
T ss_pred             HHHhC-CCcEEEECCCCCCCCCh---------------------------------------------------------
Confidence            98876 68999999997654332                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                        .+.+.++|..++++|+.+++.+.++++|.|++++.++||++||.... +  .++...|++||+++++++++++.|+++
T Consensus        85 --~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~--~~~~~~Y~~sK~a~~~~~~~~a~e~~~  159 (234)
T PRK07577         85 --GKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF-G--ALDRTSYSAAKSALVGCTRTWALELAE  159 (234)
T ss_pred             --HHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc-C--CCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence              26788999999999999999999999999998888999999998643 3  356789999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +||++|+|+||+ +.|++.....+..         ..+..+..+|+|+|+.+++|+++...+++|+++ +++|
T Consensus       160 ~gi~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (234)
T PRK07577        160 YGITVNAVAPGP-IETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGG  231 (234)
T ss_pred             hCcEEEEEecCc-ccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCC
Confidence            999999999996 5554433221110         112334568999999999999988889999999 6655

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-31  Score=255.43  Aligned_cols=223  Identities=21%  Similarity=0.271  Sum_probs=183.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.+       .+..+++...+.++.++.+|++|.++++++
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   73 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL-------DRAVAELRAQGAEVLGVRTDVSDAAQVEAL   73 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH-------HHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            3467899999999999999999999999999999999976542       334555555567888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|+||||||........                                                     
T Consensus        74 ~~~~~~~~g~id~vi~~Ag~~~~~~~~-----------------------------------------------------  100 (287)
T PRK06194         74 ADAALERFGAVHLLFNNAGVGAGGLVW-----------------------------------------------------  100 (287)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcc-----------------------------------------------------
Confidence            999999999999999999986543332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC------CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH------AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~------g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                            +.+.++|+.++++|+.|++.++++++|.|+++..      ++||++||..+..+  .++...|++||++++.|+
T Consensus       101 ------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~  172 (287)
T PRK06194        101 ------ENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA--PPAMGIYNVSKHAVVSLT  172 (287)
T ss_pred             ------cCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--CCCCcchHHHHHHHHHHH
Confidence                  7788999999999999999999999999988754      79999999988876  367889999999999999


Q ss_pred             HHHHHhhcC--CCeEEEEecchhhhhHHHHHHhcCCCcc-----c----------------ccccCChhhHHHHHHHhhc
Q psy6113         238 LGMAEEFKG--DNIAVNALWPRTAIYTAAIEMLTGGSAD-----A----------------KATSRKPEIMADAAYYILS  294 (406)
Q Consensus       238 ~~la~e~~~--~gI~vn~v~PG~~~~t~~~~~~~~~~~~-----~----------------~~~~~~pe~vA~~v~~L~s  294 (406)
                      ++++.|++.  .+||+|+++||+ +.|.+.......+..     .                .....+|+|+|+.++.++.
T Consensus       173 ~~l~~e~~~~~~~irv~~v~pg~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        173 ETLYQDLSLVTDQVGASVLCPYF-VPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             HHHHHHHhhcCCCeEEEEEEeCc-ccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHH
Confidence            999999874  579999999996 566554432211000     0                0112589999999999875


Q ss_pred             C
Q psy6113         295 S  295 (406)
Q Consensus       295 ~  295 (406)
                      .
T Consensus       252 ~  252 (287)
T PRK06194        252 A  252 (287)
T ss_pred             c
Confidence            4

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-31  Score=249.02  Aligned_cols=236  Identities=26%  Similarity=0.321  Sum_probs=192.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|+++||||++|||+++|++|+++|++|++++|+....      ..+..+.++..+.++.++.+|+++++++.++++++.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEE------LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ   75 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhH------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            48999999999999999999999999999999875421      223344455556788999999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||......                                                         .++
T Consensus        76 ~~~~~id~vi~~ag~~~~~~---------------------------------------------------------~~~   98 (256)
T PRK12745         76 AAWGRIDCLVNNAGVGVKVR---------------------------------------------------------GDL   98 (256)
T ss_pred             HhcCCCCEEEECCccCCCCC---------------------------------------------------------CCh
Confidence            99999999999999753321                                                         112


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC------CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN------HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~------~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      .+.+.++|+..+++|+.+++.++++++|.|.+++      .++||++||..+..+  .++...|++||+++++++++++.
T Consensus        99 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~  176 (256)
T PRK12745         99 LDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV--SPNRGEYCISKAGLSMAAQLFAA  176 (256)
T ss_pred             hhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC--CCCCcccHHHHHHHHHHHHHHHH
Confidence            3778899999999999999999999999998765      357999999988876  36778999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |+.++||++++|+||+ +.+++......       ....+..++.+|+|+++++.+++++...+++|+++ +|+|.
T Consensus       177 ~~~~~gi~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~  251 (256)
T PRK12745        177 RLAEEGIGVYEVRPGL-IKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGL  251 (256)
T ss_pred             HHHHhCCEEEEEecCC-CcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCe
Confidence            9999999999999996 55543221110       01123445678999999999999988888999988 66653

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=253.66  Aligned_cols=232  Identities=21%  Similarity=0.291  Sum_probs=188.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCe-eeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN-CLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+.+ ..++.+|++++++++++++++.
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG-------LAQTVADARALGGTVPEHRALDISDYDAVAAFAADIH   73 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998654       23345555555544 4557899999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||.......                                                           
T Consensus        74 ~~~~~id~lv~~ag~~~~~~~-----------------------------------------------------------   94 (272)
T PRK07832         74 AAHGSMDVVMNIAGISAWGTV-----------------------------------------------------------   94 (272)
T ss_pred             HhcCCCCEEEECCCCCCCCcc-----------------------------------------------------------
Confidence            999999999999997644332                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                      .+.+.++|+..+++|+.+++.++++++|+|.+++ .++||++||..+..+  .+++..|++||+++.+|+++++.|++++
T Consensus        95 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~  172 (272)
T PRK07832         95 DRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA--LPWHAAYSASKFGLRGLSEVLRFDLARH  172 (272)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC--CCCCcchHHHHHHHHHHHHHHHHHhhhc
Confidence            2788999999999999999999999999997753 589999999988766  4678899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcC-----CCc-------ccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTG-----GSA-------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~-----~~~-------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ||+||+|+||+ ++|++.+....     ...       ....+..+|+++|+.+++++.. +.++++..+ .+.+++
T Consensus       173 ~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~-~~~~~~~~~~~~~~~~  247 (272)
T PRK07832        173 GIGVSVVVPGA-VKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEK-NRYLVYTSPDIRALYW  247 (272)
T ss_pred             CcEEEEEecCc-ccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhc-CCeEEecCcchHHHHH
Confidence            99999999996 55655443211     000       0123457999999999999964 667888766 555533

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=250.43  Aligned_cols=231  Identities=24%  Similarity=0.326  Sum_probs=190.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||++++++|+++|++|++++|+.++.+       ...+.+  .+.++.++.+|+++.+++.++++++.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~-------~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALA-------AFADAL--GDARFVPVACDLTDAASLAAALANAA   72 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHh--cCCceEEEEecCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999999999865422       223333  23568889999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      ++++++|++|||+|.....+..                                                          
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~----------------------------------------------------------   94 (257)
T PRK07074         73 AERGPVDVLVANAGAARAASLH----------------------------------------------------------   94 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChh----------------------------------------------------------
Confidence            9999999999999976543322                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +.+.++|...+++|+.+++.+.+++++.+.+++.++||++||..+..+   .+...|+++|++++.++++++.|++++|
T Consensus        95 -~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~~~y~~sK~a~~~~~~~~a~~~~~~g  170 (257)
T PRK07074         95 -DTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA---LGHPAYSAAKAGLIHYTKLLAVEYGRFG  170 (257)
T ss_pred             -hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC---CCCcccHHHHHHHHHHHHHHHHHHhHhC
Confidence             678889999999999999999999999999888899999999876543   3567899999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCC---------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGG---------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~---------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+||+++||+ +.|.+.......         ...+..++..|+|+++++++|+++...+++|+.+ +|+|..
T Consensus       171 i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~  242 (257)
T PRK07074        171 IRANAVAPGT-VKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLT  242 (257)
T ss_pred             eEEEEEEeCc-CCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcC
Confidence            9999999996 455443211100         0123355689999999999999988889999998 777754

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=249.42  Aligned_cols=234  Identities=28%  Similarity=0.417  Sum_probs=189.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++++|+++||||++|||+++|++|+++|++|++. .|+.++       ..+..+.+...+.++.++.+|++|++++.++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~   74 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQA-------ADETIREIESNGGKAFLIEADLNSIDGVKKL   74 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCcEEEEEcCcCCHHHHHHH
Confidence            45789999999999999999999999999998775 565443       2233444544566788999999999999999


Q ss_pred             HHHHHHhc------CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          84 VNAAVDKF------GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        84 ~~~i~~~~------g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      ++++.+.+      +++|++|||||.......                                                
T Consensus        75 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~------------------------------------------------  106 (254)
T PRK12746         75 VEQLKNELQIRVGTSEIDILVNNAGIGTQGTI------------------------------------------------  106 (254)
T ss_pred             HHHHHHHhccccCCCCccEEEECCCCCCCCCh------------------------------------------------
Confidence            99999887      479999999997543322                                                


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                                 .+.+.+.|+.++++|+.+++++++.++|.|.+.  +++|++||..+..+  .+++..|++||++++.++
T Consensus       107 -----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~  171 (254)
T PRK12746        107 -----------ENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLG--FTGSIAYGLSKGALNTMT  171 (254)
T ss_pred             -----------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCC--CCCCcchHhhHHHHHHHH
Confidence                       277889999999999999999999999998654  79999999988766  477889999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      ++++.++.++||++++++||+ +.|++........        .....+..+|+|+|+.+.+++++.+.+++|+.+ +++
T Consensus       172 ~~~~~~~~~~~i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        172 LPLAKHLGERGITVNTIMPGY-TKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             HHHHHHHhhcCcEEEEEEECC-ccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            999999999999999999996 5555443222111        112345668999999999999987778999887 554


Q ss_pred             h
Q psy6113         309 E  309 (406)
Q Consensus       309 g  309 (406)
                      |
T Consensus       251 ~  251 (254)
T PRK12746        251 G  251 (254)
T ss_pred             C
Confidence            4

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=251.12  Aligned_cols=216  Identities=21%  Similarity=0.229  Sum_probs=179.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||++++++|+++|++|++++|+.+++       .+..+++...+ ++.++.+|+++++++.++++++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~   73 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDAL-------QAFAARLPKAA-RVSVYAADVRDADALAAAAADFI   73 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999986542       22333333223 78899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      ++++++|++|||||+.......                                                          
T Consensus        74 ~~~g~id~lv~~ag~~~~~~~~----------------------------------------------------------   95 (257)
T PRK07024         74 AAHGLPDVVIANAGISVGTLTE----------------------------------------------------------   95 (257)
T ss_pred             HhCCCCCEEEECCCcCCCcccc----------------------------------------------------------
Confidence            9999999999999975432211                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.++|+.++++|+.|++.+++.++|.|++++.++||++||..+..+  .++...|++||++++.++++++.|++++|
T Consensus        96 ~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~e~~~~g  173 (257)
T PRK07024         96 EREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG--LPGAGAYSASKAAAIKYLESLRVELRPAG  173 (257)
T ss_pred             ccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC--CCCCcchHHHHHHHHHHHHHHHHHhhccC
Confidence            1467889999999999999999999999999988899999999998877  47788999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCC
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      |+|++|+||+ +.|++.....    .......+|+++|+.++..+.+..
T Consensus       174 i~v~~v~Pg~-v~t~~~~~~~----~~~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        174 VRVVTIAPGY-IRTPMTAHNP----YPMPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             cEEEEEecCC-CcCchhhcCC----CCCCCccCHHHHHHHHHHHHhCCC
Confidence            9999999996 5565433211    111234689999999999987543

>KOG1199|consensus

Probab=100.00  E-value=3.9e-33  Score=234.74  Aligned_cols=243  Identities=24%  Similarity=0.328  Sum_probs=201.0

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |+...+.+|-+++||||.+|+|++.|++|+++|+.|++.+....+.++          ..++.|+++.|.+.|+++++++
T Consensus         1 ~sa~rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~----------vakelg~~~vf~padvtsekdv   70 (260)
T KOG1199|consen    1 MSALRSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGAD----------VAKELGGKVVFTPADVTSEKDV   70 (260)
T ss_pred             CchhhhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchH----------HHHHhCCceEEeccccCcHHHH
Confidence            344456789999999999999999999999999999999987776442          2345689999999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +..+..++.+||++|.+|||||+.......+.                                                
T Consensus        71 ~aala~ak~kfgrld~~vncagia~a~ktyn~------------------------------------------------  102 (260)
T KOG1199|consen   71 RAALAKAKAKFGRLDALVNCAGIAYAFKTYNV------------------------------------------------  102 (260)
T ss_pred             HHHHHHHHhhccceeeeeeccceeeeeeeeee------------------------------------------------
Confidence            99999999999999999999998754332211                                                


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------NHAHILNISPPLNLNPFWFKNHVAYTISKYGMS  234 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~  234 (406)
                           ..-...+.|++++++++|+.|+|++++...-.|-+.      ..|.|||+.|.+++.+.  .++++|++||.++.
T Consensus       103 -----~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq--~gqaaysaskgaiv  175 (260)
T KOG1199|consen  103 -----QKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ--TGQAAYSASKGAIV  175 (260)
T ss_pred             -----cccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc--cchhhhhcccCceE
Confidence                 011257789999999999999999999999988654      25899999999999884  78999999999999


Q ss_pred             HHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEEEe
Q psy6113         235 MCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID  307 (406)
Q Consensus       235 ~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d  307 (406)
                      +++.-+|+.++..|||+|.|.|| ..+|++...+++.-       .....|...|.|-+..+-.+..  ..+++|++|.-
T Consensus       176 gmtlpiardla~~gir~~tiapg-lf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiie--np~lngevir~  252 (260)
T KOG1199|consen  176 GMTLPIARDLAGDGIRFNTIAPG-LFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIE--NPYLNGEVIRF  252 (260)
T ss_pred             eeechhhhhcccCceEEEeeccc-ccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHh--CcccCCeEEEe
Confidence            99999999999999999999999 47887776654322       1234567899999998877774  67999999944


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      +|.+
T Consensus       253 dgal  256 (260)
T KOG1199|consen  253 DGAL  256 (260)
T ss_pred             ccee
Confidence            4433

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=253.24  Aligned_cols=214  Identities=21%  Similarity=0.267  Sum_probs=176.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+|+++||||++|||+++|++|+++|++|++++|+.+.+           +++...  .+.++.+|++|.++++++++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~-----------~~l~~~--~~~~~~~Dl~d~~~~~~~~~~~   69 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-----------AALEAE--GLEAFQLDYAEPESIAALVAQV   69 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-----------HHHHHC--CceEEEccCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999999986542           222222  3677899999999999999999


Q ss_pred             HHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          88 VDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        88 ~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .+.+ +++|++|||||+.......                                                        
T Consensus        70 ~~~~~g~id~li~~Ag~~~~~~~~--------------------------------------------------------   93 (277)
T PRK05993         70 LELSGGRLDALFNNGAYGQPGAVE--------------------------------------------------------   93 (277)
T ss_pred             HHHcCCCccEEEECCCcCCCCCcc--------------------------------------------------------
Confidence            8776 6899999999976544332                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|+.++++|+.|++.+++.++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|+++
T Consensus        94 ---~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~el~~  168 (277)
T PRK05993         94 ---DLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP--MKYRGAYNASKFAIEGLSLTLRMELQG  168 (277)
T ss_pred             ---cCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC--CCccchHHHHHHHHHHHHHHHHHHhhh
Confidence               788899999999999999999999999999988899999999988876  467889999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCC-------C------------------cccccccCChhhHHHHHHHhhcCC
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGG-------S------------------ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~-------~------------------~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +||+|++|+||+ +.|++.+.....       .                  ........+||++|+.++..+...
T Consensus       169 ~gi~v~~v~Pg~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        169 SGIHVSLIEPGP-IETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             hCCEEEEEecCC-ccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence            999999999996 566554322100       0                  001112368999999999988643

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-31  Score=249.49  Aligned_cols=215  Identities=19%  Similarity=0.209  Sum_probs=175.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCC-eeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG-NCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.++.      +++..+++...+. ++.++.+|++|+++++++++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~------~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~   80 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPR------RDAAVAQMKAAGASSVEVIDFDALDTDSHPKVID   80 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchh------HHHHHHHHHhcCCCceEEEEecCCChHHHHHHHH
Confidence            47899999999999999999999995 8999999987641      2234555655544 78899999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+ ++++|++|||+|+.......                                                       
T Consensus        81 ~~~~-~g~id~li~~ag~~~~~~~~-------------------------------------------------------  104 (253)
T PRK07904         81 AAFA-GGDVDVAIVAFGLLGDAEEL-------------------------------------------------------  104 (253)
T ss_pred             HHHh-cCCCCEEEEeeecCCchhhc-------------------------------------------------------
Confidence            9886 58999999999975321110                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          ..+.+++.+++++|+.+++.++++++|.|++++.++||++||..+..+  .++...|++||+++.+|+++++.|+.
T Consensus       105 ----~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~--~~~~~~Y~~sKaa~~~~~~~l~~el~  178 (253)
T PRK07904        105 ----WQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV--RRSNFVYGSTKAGLDGFYLGLGEALR  178 (253)
T ss_pred             ----ccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC--CCCCcchHHHHHHHHHHHHHHHHHHh
Confidence                223455667899999999999999999999998899999999988665  36678899999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++||+|++|+||+ +.|++......     .....+|+++|+.++..+.+.
T Consensus       179 ~~~i~v~~v~Pg~-v~t~~~~~~~~-----~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        179 EYGVRVLVVRPGQ-VRTRMSAHAKE-----APLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             hcCCEEEEEeeCc-eecchhccCCC-----CCCCCCHHHHHHHHHHHHHcC
Confidence            9999999999996 55655443221     123468999999999998754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.98  E-value=3.8e-31  Score=247.29  Aligned_cols=227  Identities=19%  Similarity=0.351  Sum_probs=183.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++||||++|||+++|++|+++|++|++++|+.+++       .....   ..+.++.++.+|+++.++++++++++.+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~---~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   70 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-------QELKD---ELGDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHH---HhccceEEEEecCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999986532       11222   2245788899999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|++|||||+.....                                                          ++.
T Consensus        71 ~~~~id~vi~~ag~~~~~~----------------------------------------------------------~~~   92 (248)
T PRK10538         71 EWRNIDVLVNNAGLALGLE----------------------------------------------------------PAH   92 (248)
T ss_pred             HcCCCCEEEECCCccCCCC----------------------------------------------------------Ccc
Confidence            9999999999999753211                                                          112


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|++++++|+.+++.+++.++|+|++++.++||++||..+..+  .++...|++||++++++++.++.|+.++||
T Consensus        93 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i  170 (248)
T PRK10538         93 KASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP--YAGGNVYGATKAFVRQFSLNLRTDLHGTAV  170 (248)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC--CCCCchhHHHHHHHHHHHHHHHHHhcCCCc
Confidence            678899999999999999999999999999888899999999988766  467889999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHH-hcCCCcc-----cccccCChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         250 AVNALWPRTAIYTAAIEM-LTGGSAD-----AKATSRKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~-~~~~~~~-----~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      +||+|+||++.+|++... +......     ......+|+|+|++++||++....+.+++..+
T Consensus       171 ~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~  233 (248)
T PRK10538        171 RVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAHVNINTLEM  233 (248)
T ss_pred             EEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCcccchhhcc
Confidence            999999997544543221 1111100     11235689999999999999777777776653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=1.9e-31  Score=231.08  Aligned_cols=187  Identities=24%  Similarity=0.319  Sum_probs=166.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |.+.|.++|||||++|||+++|++|.+.|-+|++++|+.++           .++.......+....||+.|.+++++++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~-----------L~e~~~~~p~~~t~v~Dv~d~~~~~~lv   69 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEER-----------LAEAKAENPEIHTEVCDVADRDSRRELV   69 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH-----------HHHHHhcCcchheeeecccchhhHHHHH
Confidence            46789999999999999999999999999999999999875           3444555667888899999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+++.|..+|+||||||+.....+..                                                     
T Consensus        70 ewLkk~~P~lNvliNNAGIqr~~dlt~-----------------------------------------------------   96 (245)
T COG3967          70 EWLKKEYPNLNVLINNAGIQRNEDLTG-----------------------------------------------------   96 (245)
T ss_pred             HHHHhhCCchheeeecccccchhhccC-----------------------------------------------------
Confidence            999999999999999999987654430                                                     


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+...++.++.+++|+.+|..+++.++|++.++..+.||+|||..++.|  ....+.|+++|+|++.++.+|...+
T Consensus        97 ----~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP--m~~~PvYcaTKAaiHsyt~aLR~Ql  170 (245)
T COG3967          97 ----AEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP--MASTPVYCATKAAIHSYTLALREQL  170 (245)
T ss_pred             ----CcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc--ccccccchhhHHHHHHHHHHHHHHh
Confidence                1556677888999999999999999999999999999999999999988  5778899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhh
Q psy6113         245 KGDNIAVNALWPRTAIY  261 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~  261 (406)
                      +..+|.|--+.|-.+.+
T Consensus       171 k~t~veVIE~~PP~V~t  187 (245)
T COG3967         171 KDTSVEVIELAPPLVDT  187 (245)
T ss_pred             hhcceEEEEecCCceec
Confidence            99999999999985433

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.7e-32  Score=259.91  Aligned_cols=237  Identities=21%  Similarity=0.255  Sum_probs=183.3

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v   80 (406)
                      ++++++||+++||||++|||+++|++|+++|++|++++|+.++..       ++.+++...  +.++.++.+|+++.+++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~-------~~~~~l~~~~~~~~~~~~~~Dl~d~~~v   82 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGK-------AAAARITAATPGADVTLQELDLTSLASV   82 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHHHhCCCCceEEEECCCCCHHHH
Confidence            457899999999999999999999999999999999999866432       233444432  45688899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|+||||||+....  .                                                  
T Consensus        83 ~~~~~~~~~~~~~iD~li~nAg~~~~~--~--------------------------------------------------  110 (306)
T PRK06197         83 RAAADALRAAYPRIDLLINNAGVMYTP--K--------------------------------------------------  110 (306)
T ss_pred             HHHHHHHHhhCCCCCEEEECCccccCC--C--------------------------------------------------
Confidence            999999999999999999999975421  1                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------ccCCchhhhHh
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------WFKNHVAYTIS  229 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------~~~~~~~Y~as  229 (406)
                               ..+.++|+..+++|+.|++.+++.++|.|++++.++||++||..+....           .+++...|++|
T Consensus       111 ---------~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~S  181 (306)
T PRK06197        111 ---------QTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQS  181 (306)
T ss_pred             ---------ccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHH
Confidence                     4566788999999999999999999999998877899999998654310           12456789999


Q ss_pred             hHHHHHHHHHHHHhhcCCCeEEEEe--cchhhhhHHHHHHhcCCCcc---cc-c-ccCChhhHHHHHHHhhcCCCCCccc
Q psy6113         230 KYGMSMCALGMAEEFKGDNIAVNAL--WPRTAIYTAAIEMLTGGSAD---AK-A-TSRKPEIMADAAYYILSSNPPSLTG  302 (406)
Q Consensus       230 Kaal~~l~~~la~e~~~~gI~vn~v--~PG~~~~t~~~~~~~~~~~~---~~-~-~~~~pe~vA~~v~~L~s~~~~~~tG  302 (406)
                      |+++++|++.++.+++++||+|+++  +||+ +.|++.+.+......   .. . ...+|++.+..+++++.+ +...+|
T Consensus       182 K~a~~~~~~~la~~l~~~~i~v~~v~~~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~g  259 (306)
T PRK06197        182 KLANLLFTYELQRRLAAAGATTIAVAAHPGV-SNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAATD-PAVRGG  259 (306)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeEEEEeCCCc-ccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHhcC-CCcCCC
Confidence            9999999999999999889877665  6996 666554332211100   00 1 134677778777777764 445678


Q ss_pred             eEEEehh
Q psy6113         303 QFLIDDE  309 (406)
Q Consensus       303 ~~i~d~g  309 (406)
                      .++.++|
T Consensus       260 ~~~~~~~  266 (306)
T PRK06197        260 QYYGPDG  266 (306)
T ss_pred             eEEccCc
Confidence            8775444

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.2e-31  Score=249.06  Aligned_cols=221  Identities=21%  Similarity=0.297  Sum_probs=182.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.       .....++ ..+.++.++.+|++|++++++++
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~   72 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL-------EALAARL-PYPGRHRWVVADLTSEAGREAVL   72 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHH-hcCCceEEEEccCCCHHHHHHHH
Confidence            357899999999999999999999999999999999986542       2333444 34567889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+.+ ++++|++|||||.....+.                                                       
T Consensus        73 ~~~~~-~~~id~lv~~ag~~~~~~~-------------------------------------------------------   96 (263)
T PRK09072         73 ARARE-MGGINVLINNAGVNHFALL-------------------------------------------------------   96 (263)
T ss_pred             HHHHh-cCCCCEEEECCCCCCcccc-------------------------------------------------------
Confidence            99876 8999999999997543322                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.+++++++++|+.|++.+++.++|+|.+++.++||++||..+..+  .++...|+++|+++.+++++++.|+
T Consensus        97 ----~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~  170 (263)
T PRK09072         97 ----EDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG--YPGYASYCASKFALRGFSEALRREL  170 (263)
T ss_pred             ----ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC--CCCccHHHHHHHHHHHHHHHHHHHh
Confidence                2778899999999999999999999999999887899999999988766  4678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC-cccccccCChhhHHHHHHHhhcCC
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS-ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~-~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      .++||+|++|+||+ +.|.+........ .....+..+|+++|+.+++++...
T Consensus       171 ~~~~i~v~~v~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        171 ADTGVRVLYLAPRA-TRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             cccCcEEEEEecCc-ccccchhhhcccccccccCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999996 5565443321111 111234678999999999999753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.98  E-value=4.8e-31  Score=246.16  Aligned_cols=238  Identities=32%  Similarity=0.456  Sum_probs=198.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++.+|+++||||+++||++++++|+++|++|++++|+.++       +....+++...+.++.++.+|+++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~   74 (251)
T PRK12826          2 RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDD-------AAATAELVEAAGGKARARQVDVRDRAALKAAV   74 (251)
T ss_pred             CCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            45779999999999999999999999999999999998654       22345556666677899999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||+|.....+.                                                       
T Consensus        75 ~~~~~~~~~~d~vi~~ag~~~~~~~-------------------------------------------------------   99 (251)
T PRK12826         75 AAGVEDFGRLDILVANAGIFPLTPF-------------------------------------------------------   99 (251)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999997654332                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          .+.+.++|...+++|+.+++.+.+.++|.|.+++.++||++||..+. .+  .++...|+++|++++++++.++.+
T Consensus       100 ----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~--~~~~~~y~~sK~a~~~~~~~~~~~  173 (251)
T PRK12826        100 ----AEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG--YPGLAHYAASKAGLVGFTRALALE  173 (251)
T ss_pred             ----hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC--CCCccHHHHHHHHHHHHHHHHHHH
Confidence                26788899999999999999999999999998888999999999887 44  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.+.|++++.|.||+ +.++........       ...+..++.+++|+|+.+++|+++...+++|+.+ +++|.+
T Consensus       174 ~~~~~i~~~~i~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        174 LAARNITVNSVHPGG-VDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             HHHcCeEEEEEeeCC-CCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            999999999999996 445433222111       0123346689999999999999887888999998 776654

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.6e-31  Score=250.38  Aligned_cols=212  Identities=23%  Similarity=0.277  Sum_probs=179.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++|+++||||++|||++++++|+++|++|++.+|+.+....               ..++.++++|++|+++++++++.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------------~~~~~~~~~D~~d~~~~~~~~~~~   67 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------------IPGVELLELDVTDDASVQAAVDEV   67 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------------cCCCeeEEeecCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999998654321               135778999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.+|++|+||||||........                                                         
T Consensus        68 ~~~~g~~d~li~~ag~~~~~~~~---------------------------------------------------------   90 (270)
T PRK06179         68 IARAGRIDVLVNNAGVGLAGAAE---------------------------------------------------------   90 (270)
T ss_pred             HHhCCCCCEEEECCCCCCCcCcc---------------------------------------------------------
Confidence            99999999999999986543332                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                        +.+.++++.++++|+.|++.+++.++|+|++++.++||++||..+..+  .++...|++||+++++++++++.|++++
T Consensus        91 --~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~el~~~  166 (270)
T PRK06179         91 --ESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP--APYMALYAASKHAVEGYSESLDHEVRQF  166 (270)
T ss_pred             --cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC--CCCccHHHHHHHHHHHHHHHHHHHHhhh
Confidence              788899999999999999999999999999988899999999988876  4678899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCCCc-----------------ccccccCChhhHHHHHHHhhcCC
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGGSA-----------------DAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~~~-----------------~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ||++++|+||+ +.|++.........                 ....+..+|+++|+.++++++..
T Consensus       167 gi~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        167 GIRVSLVEPAY-TKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             CcEEEEEeCCC-cccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            99999999996 55554433211100                 01223468999999999998754

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.9e-31  Score=247.06  Aligned_cols=233  Identities=27%  Similarity=0.370  Sum_probs=187.7

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |-.++++++|+++||||++|||+.+++.|+++|++|++++|+.++.           +++.... ...++.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~-----------~~~~~~~-~~~~~~~D~~~~~~v   68 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL-----------DRLAGET-GCEPLRLDVGDDAAI   68 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-----------HHHHHHh-CCeEEEecCCCHHHH
Confidence            4456779999999999999999999999999999999999986531           1222211 245688999999988


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++.    ++++|++|||||........                                                  
T Consensus        69 ~~~~~~----~~~~d~vi~~ag~~~~~~~~--------------------------------------------------   94 (245)
T PRK07060         69 RAALAA----AGAFDGLVNCAGIASLESAL--------------------------------------------------   94 (245)
T ss_pred             HHHHHH----hCCCCEEEECCCCCCCCChh--------------------------------------------------
Confidence            887665    57899999999976443322                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                               +.+.++|++++++|+.+++.+++++++.+++++ .++||++||..+..+  .++...|++||++++.++++
T Consensus        95 ---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~y~~sK~a~~~~~~~  163 (245)
T PRK07060         95 ---------DMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG--LPDHLAYCASKAALDAITRV  163 (245)
T ss_pred             ---------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC--CCCCcHhHHHHHHHHHHHHH
Confidence                     678889999999999999999999999998664 489999999988876  46788999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHH-hcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEM-LTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~-~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++.++.+.||++++|+||+ +.+++... +...       ...+..++.+|+|+|+++++|+++.+.+++|+.+ +|+|+
T Consensus       164 ~a~~~~~~~i~v~~v~pg~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        164 LCVELGPHGIRVNSVNPTV-TLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HHHHHhhhCeEEEEEeeCC-CCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence            9999999999999999996 55544321 1110       0123456789999999999999988889999999 77765


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      +
T Consensus       243 ~  243 (245)
T PRK07060        243 T  243 (245)
T ss_pred             c
Confidence            3

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=8.4e-31  Score=244.94  Aligned_cols=235  Identities=26%  Similarity=0.314  Sum_probs=189.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+++++|+++||||++|||++++++|+++|++|++..|+...      ........+...+.++.++.+|+++++++.++
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE------EMNETLKMVKENGGEGIGVLADVSTREGCETL   74 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChH------HHHHHHHHHHHcCCeeEEEEeccCCHHHHHHH
Confidence            466889999999999999999999999999999887765321      12233445555667788899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.....+..                                                     
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~-----------------------------------------------------  101 (252)
T PRK06077         75 AKATIDRYGVADILVNNAGLGLFSPFL-----------------------------------------------------  101 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChh-----------------------------------------------------
Confidence            999999999999999999976443322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+..+++|+.+++.+++++.|+|++.  ++||++||..+..+  .+++..|++||+++++++++++.|
T Consensus       102 ------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~  171 (252)
T PRK06077        102 ------NVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRP--AYGLSIYGAMKAAVINLTKYLALE  171 (252)
T ss_pred             ------hCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCC--CCCchHHHHHHHHHHHHHHHHHHH
Confidence                  67778899999999999999999999999764  79999999998876  478889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++ +|+++.+.||+ ++|.+........          ..+..++.+|+|+|++++++++.  ..++|+.+ +++|..
T Consensus       172 ~~~-~i~v~~v~Pg~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~--~~~~g~~~~i~~g~~  246 (252)
T PRK06077        172 LAP-KIRVNAIAPGF-VKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI--ESITGQVFVLDSGES  246 (252)
T ss_pred             Hhc-CCEEEEEeeCC-ccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc--cccCCCeEEecCCee
Confidence            988 99999999996 5555443221100          01223468999999999999963  36788777 666643

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.6e-31  Score=252.58  Aligned_cols=217  Identities=25%  Similarity=0.273  Sum_probs=178.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+|+++||||++|||++++++|+++|++|++++|+.++++          ......+.++.++.+|++|++++.++++.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~----------~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~   72 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA----------DFEALHPDRALARLLDVTDFDAIDAVVADA   72 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH----------HHHhhcCCCeeEEEccCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999999865321          111223456888999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.++++|++|||||........                                                         
T Consensus        73 ~~~~~~~d~vv~~ag~~~~~~~~---------------------------------------------------------   95 (277)
T PRK06180         73 EATFGPIDVLVNNAGYGHEGAIE---------------------------------------------------------   95 (277)
T ss_pred             HHHhCCCCEEEECCCccCCcccc---------------------------------------------------------
Confidence            99999999999999976443322                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                        +.+.++|++++++|+.|++.++++++|+|++++.++||++||..+..+  .+++..|++||+++++++++++.|++++
T Consensus        96 --~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~  171 (277)
T PRK06180         96 --ESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT--MPGIGYYCGSKFALEGISESLAKEVAPF  171 (277)
T ss_pred             --cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC--CCCcchhHHHHHHHHHHHHHHHHHhhhh
Confidence              788899999999999999999999999999888899999999998876  4788999999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCC-------------------CcccccccCChhhHHHHHHHhhcCC
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGG-------------------SADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~-------------------~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ||+|++|+||+ +.|++.......                   ...+..++.+|+|+|+++++++...
T Consensus       172 gi~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        172 GIHVTAVEPGS-FRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             CcEEEEEecCC-cccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99999999996 444321110000                   0011234568999999999998753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.3e-31  Score=245.89  Aligned_cols=228  Identities=21%  Similarity=0.266  Sum_probs=182.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||+++|++|+++|++|++++|+..+         ...+.....+.++.++.+|++++++++++++++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK---------ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILS   72 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH---------HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999997632         11111223356788899999999999999999988


Q ss_pred             hcCCc--c--EEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          90 KFGGI--D--ILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        90 ~~g~i--D--~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .++..  +  ++|+|||...+..                                                         
T Consensus        73 ~~~~~~~~~~~~v~~ag~~~~~~---------------------------------------------------------   95 (251)
T PRK06924         73 SIQEDNVSSIHLINNAGMVAPIK---------------------------------------------------------   95 (251)
T ss_pred             hcCcccCCceEEEEcceecccCc---------------------------------------------------------
Confidence            77532  2  7899998753321                                                         


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                       ++.+.+.++|.+.+++|+.+++.+++.++|+|++. ..++||++||..+..+  .+++..|+++|+|++++++.++.|+
T Consensus        96 -~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~  172 (251)
T PRK06924         96 -PIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP--YFGWSAYCSSKAGLDMFTQTVATEQ  172 (251)
T ss_pred             -ccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC--CCCcHHHhHHHHHHHHHHHHHHHHh
Confidence             22378899999999999999999999999999875 3579999999888766  4778999999999999999999997


Q ss_pred             c--CCCeEEEEecchhhhhHHHHHHhcCC--Cc----------ccccccCChhhHHHHHHHhhcCCCCCccceEEEeh
Q psy6113         245 K--GDNIAVNALWPRTAIYTAAIEMLTGG--SA----------DAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD  308 (406)
Q Consensus       245 ~--~~gI~vn~v~PG~~~~t~~~~~~~~~--~~----------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~  308 (406)
                      +  +.||+||+|+||+ +.|++.......  ..          .+..+..+|+|+|+.+++|+++. .+++|+.+..+
T Consensus       173 ~~~~~~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~G~~~~v~  248 (251)
T PRK06924        173 EEEEYPVKIVAFSPGV-MDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-DFPNGEVIDID  248 (251)
T ss_pred             hhcCCCeEEEEecCCc-cccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-cCCCCCEeehh
Confidence            5  5689999999996 566654432111  00          12345789999999999999874 78999998443

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=9.5e-31  Score=242.99  Aligned_cols=223  Identities=30%  Similarity=0.396  Sum_probs=187.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.++.       .+..+++...+.++.++.+|++++++++++
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-------KAVAEEVEAYGVKVVIATADVSDYEEVTAA   74 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHHhCCeEEEEECCCCCHHHHHHH
Confidence            4567899999999999999999999999999999999987542       234455555677889999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.......                                                      
T Consensus        75 ~~~~~~~~~~id~vi~~ag~~~~~~~------------------------------------------------------  100 (239)
T PRK07666         75 IEQLKNELGSIDILINNAGISKFGKF------------------------------------------------------  100 (239)
T ss_pred             HHHHHHHcCCccEEEEcCccccCCCc------------------------------------------------------
Confidence            99999999999999999997643322                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.++++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+  .++...|+++|+++..++++++.|
T Consensus       101 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~e  173 (239)
T PRK07666        101 -----LELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG--AAVTSAYSASKFGVLGLTESLMQE  173 (239)
T ss_pred             -----ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC--CCCCcchHHHHHHHHHHHHHHHHH
Confidence                 2678899999999999999999999999999888899999999988877  367788999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +.++||++++|+||+ +.+.+........ .......+|+++|+.++.+++..
T Consensus       174 ~~~~gi~v~~v~pg~-v~t~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        174 VRKHNIRVTALTPST-VATDMAVDLGLTD-GNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             hhccCcEEEEEecCc-ccCcchhhccccc-cCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999996 5554433221111 12235678999999999999753

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.98  E-value=8.5e-31  Score=245.01  Aligned_cols=229  Identities=34%  Similarity=0.452  Sum_probs=184.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCCC-hHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIRD-EHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~~-~~~v~~~   83 (406)
                      .+++|+++||||++|||+++|++|+++|++|+++.|+.+..  .   .+...+.....+ ..+.+..+|+++ .++++.+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~   76 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE--A---AEALAAAIKEAGGGRAAAVAADVSDDEESVEAL   76 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh--h---HHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHH
Confidence            57899999999999999999999999999999988887642  0   112222222222 367788899998 9999999


Q ss_pred             HHHHHHhcCCccEEEecccccccC-CCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLT-DTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ++.+.+.+|++|++|||||+.... +.                                                     
T Consensus        77 ~~~~~~~~g~id~lvnnAg~~~~~~~~-----------------------------------------------------  103 (251)
T COG1028          77 VAAAEEEFGRIDILVNNAGIAGPDAPL-----------------------------------------------------  103 (251)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCh-----------------------------------------------------
Confidence            999999999999999999987652 32                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCC-chhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKN-HVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~-~~~Y~asKaal~~l~~~la  241 (406)
                            .+.+.++|++++++|+.+++.+++.+.|+++++   +||++||..+. +.  ++ +.+|++||+|+.+|+++++
T Consensus       104 ------~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~--~~~~~~Y~~sK~al~~~~~~l~  171 (251)
T COG1028         104 ------EELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GG--PPGQAAYAASKAALIGLTKALA  171 (251)
T ss_pred             ------hhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CC--CCCcchHHHHHHHHHHHHHHHH
Confidence                  278889999999999999999999888888844   99999999998 63  44 5899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC---------cccccccCChhhHHHHHHHhhcCC-CCCccceEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS---------ADAKATSRKPEIMADAAYYILSSN-PPSLTGQFL  305 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~---------~~~~~~~~~pe~vA~~v~~L~s~~-~~~~tG~~i  305 (406)
                      .|+.++||+||+|+||+ +.|++........         ..+..+...|+++++.+.|+.+.. ..+++|+.+
T Consensus       172 ~e~~~~gi~v~~v~PG~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  244 (251)
T COG1028         172 LELAPRGIRVNAVAPGY-IDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYITGQTL  244 (251)
T ss_pred             HHHhhhCcEEEEEEecc-CCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhccccCCEE
Confidence            99999999999999995 5666554322211         002236678999999999998763 567888877

>KOG1208|consensus

Probab=99.98  E-value=3.2e-32  Score=260.13  Aligned_cols=235  Identities=24%  Similarity=0.312  Sum_probs=186.1

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH--cCCeeeeeeecCCChHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--AGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~--~g~~~~~~~~Dl~~~~~v   80 (406)
                      +..++.|++++|||+++|||+++|++|+++|++|++.+|+.++.+       ++.+++..  ...++.++++|+++.++|
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~-------~~~~~i~~~~~~~~i~~~~lDLssl~SV  101 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGE-------EAKEQIQKGKANQKIRVIQLDLSSLKSV  101 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHH-------HHHHHHHhcCCCCceEEEECCCCCHHHH
Confidence            346789999999999999999999999999999999999986643       45555554  345788899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|+||||||++.+..                                                    
T Consensus       102 ~~fa~~~~~~~~~ldvLInNAGV~~~~~----------------------------------------------------  129 (314)
T KOG1208|consen  102 RKFAEEFKKKEGPLDVLINNAGVMAPPF----------------------------------------------------  129 (314)
T ss_pred             HHHHHHHHhcCCCccEEEeCcccccCCc----------------------------------------------------
Confidence            9999999999999999999999986543                                                    


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC--------Cc---cCCchhhhHh
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP--------FW---FKNHVAYTIS  229 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~--------~~---~~~~~~Y~as  229 (406)
                               ..+.|.++..|.+|..|+|.+++.++|.|+.+..+|||++||..+...        ..   +....+|+.|
T Consensus       130 ---------~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~S  200 (314)
T KOG1208|consen  130 ---------SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALS  200 (314)
T ss_pred             ---------ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccchhHHHHh
Confidence                     456688999999999999999999999999988899999999876110        00   2234469999


Q ss_pred             hHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCc----c-cccccCChhhHHHHHHHhhcC-CCCCccce
Q psy6113         230 KYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSA----D-AKATSRKPEIMADAAYYILSS-NPPSLTGQ  303 (406)
Q Consensus       230 Kaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~----~-~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~  303 (406)
                      |.+...+++.|++.+.+ ||.+++++||.+.++...+ ...-..    . .....-+|++.|.+.++++-+ +-..++|.
T Consensus       201 Kla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~  278 (314)
T KOG1208|consen  201 KLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGK  278 (314)
T ss_pred             HHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-chHHHHHHHHHHHHHhccCHHHHhhheehhccCccccCcccc
Confidence            99999999999999988 9999999999644442333 000000    0 011124799999999998753 34566776


Q ss_pred             EEEe
Q psy6113         304 FLID  307 (406)
Q Consensus       304 ~i~d  307 (406)
                      ++-|
T Consensus       279 y~~d  282 (314)
T KOG1208|consen  279 YFED  282 (314)
T ss_pred             cccc
Confidence            6543

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.8e-31  Score=248.67  Aligned_cols=218  Identities=26%  Similarity=0.373  Sum_probs=183.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|++++|+.+++       ++...++...+.++.++.+|+++++++.++++.+.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   73 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGG-------EETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE   73 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999987642       344556666677899999999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|+||||||+.......                                                           
T Consensus        74 ~~~~id~lI~~ag~~~~~~~~-----------------------------------------------------------   94 (270)
T PRK05650         74 KWGGIDVIVNNAGVASGGFFE-----------------------------------------------------------   94 (270)
T ss_pred             HcCCCCEEEECCCCCCCCCcc-----------------------------------------------------------
Confidence            999999999999986544332                                                           


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|++++++|+.+++.+++.++|+|++++.++||++||..+..+  .++...|++||+++++++++++.|+.++||
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi  172 (270)
T PRK05650         95 ELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ--GPAMSSYNVAKAGVVALSETLLVELADDEI  172 (270)
T ss_pred             cCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhcccCc
Confidence            778899999999999999999999999999888899999999998876  478899999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCCCcc--------cccccCChhhHHHHHHHhhcCC
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGGSAD--------AKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~~~~--------~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++++|+||+ +.|++..........        ......+|+++|+.++..+...
T Consensus       173 ~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        173 GVHVVCPSF-FQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             EEEEEecCc-cccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            999999996 556544332211111        0123468999999999998753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=1.5e-30  Score=241.96  Aligned_cols=237  Identities=30%  Similarity=0.411  Sum_probs=195.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+++|+++||||+++||++++++|+++|++|+++.|+..+.      .....+++...+.++.++.+|+++++++.++++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG------AEALVAEIGALGGKALAVQGDVSDAESVERAVD   75 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            56889999999999999999999999999998888876431      223344555567788899999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|++|||||........                                                       
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~-------------------------------------------------------  100 (248)
T PRK05557         76 EAKAEFGGVDILVNNAGITRDNLLM-------------------------------------------------------  100 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcc-------------------------------------------------------
Confidence            9999999999999999976543322                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.+.+...+++|+.+++.+.+.++|.+.+.+.+++|++||..+..+.  ++...|+++|++++.+++.++.+++
T Consensus       101 ----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~--~~~~~y~~sk~a~~~~~~~~a~~~~  174 (248)
T PRK05557        101 ----RMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN--PGQANYAASKAGVIGFTKSLARELA  174 (248)
T ss_pred             ----cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC--CCCchhHHHHHHHHHHHHHHHHHhh
Confidence                6778889999999999999999999999998877899999999877663  6788999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.||++++++||+ +.+++.+.....      ...+..+..+|+|+|+.+.+|+++.+.+++|+.+ +++|.
T Consensus       175 ~~~i~~~~v~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        175 SRGITVNAVAPGF-IETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             hhCeEEEEEecCc-cCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            9999999999996 444332211100      0112345678999999999999887889999988 66654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=240.43  Aligned_cols=234  Identities=27%  Similarity=0.334  Sum_probs=192.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++++++|+++||||+++||++++++|+++|++|++++|+.++..       +..+++...  .+..+.+|++|.++++++
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~--~~~~~~~D~~~~~~~~~~   72 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLS-------QTLPGVPAD--ALRIGGIDLVDPQAARRA   72 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHH-------HHHHHHhhc--CceEEEeecCCHHHHHHH
Confidence            45788999999999999999999999999999999999876422       223333332  356678999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||+|........                                                     
T Consensus        73 ~~~~~~~~~~~d~vi~~ag~~~~~~~~-----------------------------------------------------   99 (239)
T PRK12828         73 VDEVNRQFGRLDALVNIAGAFVWGTIA-----------------------------------------------------   99 (239)
T ss_pred             HHHHHHHhCCcCEEEECCcccCcCChh-----------------------------------------------------
Confidence            999999999999999999976433222                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+  .++...|+++|++++.+++.++.+
T Consensus       100 ------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~y~~sk~a~~~~~~~~a~~  171 (239)
T PRK12828        100 ------DGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA--GPGMGAYAAAKAGVARLTEALAAE  171 (239)
T ss_pred             ------hCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC--CCCcchhHHHHHHHHHHHHHHHHH
Confidence                  667888999999999999999999999999888899999999988766  367789999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.+.||++++|.||+ +.+++.......  .....+.+++|+|+.+++++++...+++|+.+ +++|.
T Consensus       172 ~~~~~i~~~~i~pg~-v~~~~~~~~~~~--~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        172 LLDRGITVNAVLPSI-IDTPPNRADMPD--ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             hhhcCeEEEEEecCc-ccCcchhhcCCc--hhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence            998999999999996 445432221111  22344678999999999999987778999998 66653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=6.9e-31  Score=255.10  Aligned_cols=238  Identities=20%  Similarity=0.172  Sum_probs=178.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |..+++|+++||||++|||++++++|+++|++|++++|+.++.       ++..+++...+.++.++.+|+++.++++++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~   73 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA-------EAAAQELGIPPDSYTIIHIDLGDLDSVRRF   73 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHhhccCCceEEEEecCCCHHHHHHH
Confidence            3567899999999999999999999999999999999986543       233444443455788999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+.......                                                     
T Consensus        74 ~~~~~~~~~~iD~li~nAg~~~~~~~~-----------------------------------------------------  100 (322)
T PRK07453         74 VDDFRALGKPLDALVCNAAVYMPLLKE-----------------------------------------------------  100 (322)
T ss_pred             HHHHHHhCCCccEEEECCcccCCCCCC-----------------------------------------------------
Confidence            999888888999999999975432110                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC--CeEEEeCCCCCCCC------------------------
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH--AHILNISPPLNLNP------------------------  217 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~--g~Iv~vsS~~~~~~------------------------  217 (406)
                           .+.+.++|+.++++|+.|++.++++++|+|++++.  ++||++||......                        
T Consensus       101 -----~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (322)
T PRK07453        101 -----PLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGF  175 (322)
T ss_pred             -----CCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcc
Confidence                 15678899999999999999999999999998764  69999999754320                        


Q ss_pred             ---------CccCCchhhhHhhHHHHHHHHHHHHhhc-CCCeEEEEecchhhhhHHHHHHhcCCC--------ccccccc
Q psy6113         218 ---------FWFKNHVAYTISKYGMSMCALGMAEEFK-GDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATS  279 (406)
Q Consensus       218 ---------~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~  279 (406)
                               ..+.+..+|+.||.+...+++.+++++. .+||+||+|+||++..|++.+......        .......
T Consensus       176 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~  255 (322)
T PRK07453        176 KAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQKNITGGY  255 (322)
T ss_pred             cccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHHHHHHHHHHHHhhce
Confidence                     0012356899999999999999999995 479999999999754554432211000        0001123


Q ss_pred             CChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         280 RKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       280 ~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      .++++.++.+++++.+.....+|.++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        256 VSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             ecHHHHhhHHHHhhcCcccCCCCceee
Confidence            467777777777775543334565553

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=247.96  Aligned_cols=226  Identities=27%  Similarity=0.336  Sum_probs=183.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++       +.   ....+.++.++++|++++++++++++++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-------~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLA-------DL---AEKYGDRLLPLALDVTDRAAVFAAVETA   71 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-------HH---HHhccCCeeEEEccCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999999865321       11   1223456788899999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.++++|++|||||+....+..                                                         
T Consensus        72 ~~~~~~~d~vi~~ag~~~~~~~~---------------------------------------------------------   94 (275)
T PRK08263         72 VEHFGRLDIVVNNAGYGLFGMIE---------------------------------------------------------   94 (275)
T ss_pred             HHHcCCCCEEEECCCCccccccc---------------------------------------------------------
Confidence            99999999999999986544332                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                        +.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+  .++...|++||++++++++.++.|++++
T Consensus        95 --~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~  170 (275)
T PRK08263         95 --EVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA--FPMSGIYHASKWALEGMSEALAQEVAEF  170 (275)
T ss_pred             --cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC--CCCccHHHHHHHHHHHHHHHHHHHhhhh
Confidence              788999999999999999999999999999888899999999988876  4778899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHH-hc-CCC-------------ccccccc-CChhhHHHHHHHhhcCCCCCccceEEEe
Q psy6113         248 NIAVNALWPRTAIYTAAIEM-LT-GGS-------------ADAKATS-RKPEIMADAAYYILSSNPPSLTGQFLID  307 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~-~~-~~~-------------~~~~~~~-~~pe~vA~~v~~L~s~~~~~~tG~~i~d  307 (406)
                      ||+||+|+||+ +.|++... .. ...             ..+..+. .+|+|+|+.++++++..  ...++++..
T Consensus       171 gi~v~~v~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~--~~~~~~~~~  243 (275)
T PRK08263        171 GIKVTLVEPGG-YSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE--NPPLRLFLG  243 (275)
T ss_pred             CcEEEEEecCC-ccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC--CCCeEEEeC
Confidence            99999999996 55544321 00 000             0022334 78999999999999753  345666643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=1.6e-30  Score=242.22  Aligned_cols=232  Identities=25%  Similarity=0.324  Sum_probs=186.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||++|||++++++|+++|++|++. .|+.++       ..+...++...+.++..+.+|++|+++++++++++.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~   74 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHA-------AQEVVNLITQAGGKAFVLQADISDENQVVAMFTAID   74 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHH-------HHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999875 454432       233445556667778899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||.......                                                          +
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~----------------------------------------------------------~   96 (247)
T PRK09730         75 QHDEPLAALVNNAGILFTQCT----------------------------------------------------------V   96 (247)
T ss_pred             HhCCCCCEEEECCCCCCCCCc----------------------------------------------------------c
Confidence            999999999999997533211                                                          1


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCC-chhhhHhhHHHHHHHHHHHHhh
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKN-HVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~-~~~Y~asKaal~~l~~~la~e~  244 (406)
                      .+.+.++|+..+++|+.+++.+++++++.|.++.   .++||++||..+..+.  ++ +..|+++|++++.++++++.|+
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~~  174 (247)
T PRK09730         97 ENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA--PGEYVDYAASKGAIDTLTTGLSLEV  174 (247)
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC--CCcccchHhHHHHHHHHHHHHHHHH
Confidence            2778899999999999999999999999998763   5789999999887663  33 4689999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcC-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTG-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .++||++++|+||+ +.+++......       ....+..+..+|+|+|+.+++++++...+++|+++ +++|
T Consensus       175 ~~~~i~v~~i~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        175 AAQGIRVNCVRPGF-IYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHhCeEEEEEEeCC-CcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            99999999999996 44543211000       00113334568999999999999988889999998 5543

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=244.47  Aligned_cols=215  Identities=26%  Similarity=0.351  Sum_probs=176.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|++++|+.+..+       +....+.  +.++.++.+|+++.+++.++++.+.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   72 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLA-------ALAAELG--AGNAWTGALDVTDRAAWDAALADFAA   72 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-------HHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999875422       2222222  56788999999999999999999887


Q ss_pred             h-cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          90 K-FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        90 ~-~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      . ++++|+||||||........                                                          
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~----------------------------------------------------------   94 (260)
T PRK08267         73 ATGGRLDVLFNNAGILRGGPFE----------------------------------------------------------   94 (260)
T ss_pred             HcCCCCCEEEECCCCCCCCccc----------------------------------------------------------
Confidence            7 78999999999986543332                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +.+.++++.++++|+.+++.+++++.|+|++++.++||++||..+..+  .++...|++||+++++++++++.++.++|
T Consensus        95 -~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~  171 (260)
T PRK08267         95 -DIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG--QPGLAVYSATKFAVRGLTEALDLEWRRHG  171 (260)
T ss_pred             -cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC--CCCchhhHHHHHHHHHHHHHHHHHhcccC
Confidence             778899999999999999999999999999888899999999988876  46788999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcC----CCcccccccCChhhHHHHHHHhhcC
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTG----GSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~----~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      |++|+|+||+ +.|.+......    ..........+|+++|+++++++..
T Consensus       172 i~v~~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        172 IRVADVMPLF-VDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             cEEEEEecCC-cCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhC
Confidence            9999999997 45544332000    0001112246899999999999854

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-30  Score=241.78  Aligned_cols=229  Identities=22%  Similarity=0.278  Sum_probs=178.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..      .+....+++..+.++.++.+|+++++++++++
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   75 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR------ANKVVAEIEAAGGRASAVGADLTDEESVAALM   75 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHh------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            457899999999999999999999999999999999875421      22334455555677889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||.....                                                         
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~~~---------------------------------------------------------   98 (248)
T PRK07806         76 DTAREEFGGLDALVLNASGGMES---------------------------------------------------------   98 (248)
T ss_pred             HHHHHhCCCCcEEEECCCCCCCC---------------------------------------------------------
Confidence            99999999999999999863210                                                         


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCC-C--CccCCchhhhHhhHHHHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLN-P--FWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~-~--~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                           ..   ++...+++|+.+++.+++++.|+|.+  .++||++||..+.. +  ...+.+..|++||++++.++++++
T Consensus        99 -----~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~  168 (248)
T PRK07806         99 -----GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALR  168 (248)
T ss_pred             -----CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHH
Confidence                 11   23457889999999999999999964  37999999965431 1  113456789999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcC-C-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTG-G-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~-~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .|++++||+||+|+||+ +.+++...+.. .       ...+..++.+|+|+|++++++++  +.+++|+.+ ++++
T Consensus       169 ~~~~~~~i~v~~v~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~--~~~~~g~~~~i~~~  242 (248)
T PRK07806        169 PELAEKGIGFVVVSGDM-IEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVT--APVPSGHIEYVGGA  242 (248)
T ss_pred             HHhhccCeEEEEeCCcc-ccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhh--ccccCccEEEecCc
Confidence            99999999999999995 44433322111 0       01233467899999999999997  457899988 5543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5.1e-30  Score=238.40  Aligned_cols=237  Identities=30%  Similarity=0.432  Sum_probs=194.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..++.|+++||||+++||++++++|+++|++|++..|+..+.      .......+...+.++.++.+|+++++++++++
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   75 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEA------AEELVEAVEALGRRAQAVQADVTDKAALEAAV   75 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHH------HHHHHHHHHhcCCceEEEECCcCCHHHHHHHH
Confidence            456789999999999999999999999999998877765431      22344455555678889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||........                                                      
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~~------------------------------------------------------  101 (249)
T PRK12825         76 AAAVERFGRIDILVNNAGIFEDKPLA------------------------------------------------------  101 (249)
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChh------------------------------------------------------
Confidence            99999999999999999965443322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|...+++|+.+++.+++.++|++++.+.+++|++||..+..+  .++...|+.+|++++++++.++.++
T Consensus       102 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~--~~~~~~y~~sK~~~~~~~~~~~~~~  174 (249)
T PRK12825        102 -----DMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG--WPGRSNYAAAKAGLVGLTKALAREL  174 (249)
T ss_pred             -----hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC--CCCchHHHHHHHHHHHHHHHHHHHH
Confidence                 677889999999999999999999999999888899999999988866  4678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .+.||++++|+||++ .+++........      ..+..++.+++|+++.+.+++++...+++|+++ +++|
T Consensus       175 ~~~~i~~~~i~pg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g  245 (249)
T PRK12825        175 AEYGITVNMVAPGDI-DTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGG  245 (249)
T ss_pred             hhcCeEEEEEEECCc-cCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence            989999999999964 443322211100      123344678999999999999887788999999 6665

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.8e-30  Score=242.98  Aligned_cols=221  Identities=24%  Similarity=0.303  Sum_probs=181.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |++|+++||||++|||+++++.|+++|++|++++|+.+..+       ...+++...  +.++.++.+|++|++++++ +
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~   72 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQE-------NLLSQATQLNLQQNIKVQQLDVTDQNSIHN-F   72 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHH-------HHHHHHHhcCCCCceeEEecCCCCHHHHHH-H
Confidence            36799999999999999999999999999999999876432       233333333  3578899999999999999 9


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|++|||||........                                                      
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~------------------------------------------------------   98 (280)
T PRK06914         73 QLVLKEIGRIDLLVNNAGYANGGFVE------------------------------------------------------   98 (280)
T ss_pred             HHHHHhcCCeeEEEECCcccccCccc------------------------------------------------------
Confidence            99999999999999999976543322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.+++++.+++|+.+++.++++++|+|++.+.++||++||..+..+  .+++..|++||+++++|+++++.|+
T Consensus        99 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~~  171 (280)
T PRK06914         99 -----EIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG--FPGLSPYVSSKYALEGFSESLRLEL  171 (280)
T ss_pred             -----cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC--CCCCchhHHhHHHHHHHHHHHHHHh
Confidence                 678899999999999999999999999999888899999999988776  4678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcC------CC-c--------------ccccccCChhhHHHHHHHhhcCCC
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTG------GS-A--------------DAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~------~~-~--------------~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +++||++++++||+ +.|++.+....      .. .              .+..++.+|+|+|+++++++++..
T Consensus       172 ~~~~i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  244 (280)
T PRK06914        172 KPFGIDVALIEPGS-YNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKR  244 (280)
T ss_pred             hhhCCEEEEEecCC-cccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCC
Confidence            99999999999995 55654432110      00 0              012345799999999999998644

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=2e-30  Score=274.90  Aligned_cols=239  Identities=28%  Similarity=0.350  Sum_probs=197.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..+.||+++||||++|||+++|+.|+++|++|++++|+.+++       .....++... .++.++.+|+++++++++++
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~-------~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~  489 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAA-------EAAAAELGGP-DRALGVACDVTDEAAVQAAF  489 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHH-------HHHHHHHhcc-CcEEEEEecCCCHHHHHHHH
Confidence            357899999999999999999999999999999999987542       2233333333 47889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|++|||||+....+..                                                      
T Consensus       490 ~~~~~~~g~iDvvI~~AG~~~~~~~~------------------------------------------------------  515 (681)
T PRK08324        490 EEAALAFGGVDIVVSNAGIAISGPIE------------------------------------------------------  515 (681)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChh------------------------------------------------------
Confidence            99999999999999999986544333                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +.+.++|+.++++|+.+++.++++++|.|++++. |+||++||..+..+  .+++..|++||+++++++++++.|
T Consensus       516 -----~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  588 (681)
T PRK08324        516 -----ETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP--GPNFGAYGAAKAAELHLVRQLALE  588 (681)
T ss_pred             -----hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC--CCCcHHHHHHHHHHHHHHHHHHHH
Confidence                 7889999999999999999999999999998774 89999999988876  377899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhh-hHHHHHH-hc-------CC----------CcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         244 FKGDNIAVNALWPRTAI-YTAAIEM-LT-------GG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~-~t~~~~~-~~-------~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      ++++||+||+|+||++. .|.+... +.       ..          ...+..+...|+|+|+++++|+++....+||++
T Consensus       589 ~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~  668 (681)
T PRK08324        589 LGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAI  668 (681)
T ss_pred             hcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCE
Confidence            99999999999999753 4432110 00       00          011234567899999999999987778899998


Q ss_pred             E-EehhHHH
Q psy6113         305 L-IDDEVLK  312 (406)
Q Consensus       305 i-~d~g~~~  312 (406)
                      + +|+|...
T Consensus       669 i~vdgG~~~  677 (681)
T PRK08324        669 ITVDGGNAA  677 (681)
T ss_pred             EEECCCchh
Confidence            8 7777653

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.4e-30  Score=237.53  Aligned_cols=214  Identities=19%  Similarity=0.230  Sum_probs=179.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +|+++||||++|||++++++|+++|++|++.+|+.++.+       +...++...  +.++.++.+|+++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   74 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE-------ELKAELLARYPGIKVAVAALDVNDHDQVFEVFAE   74 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-------HHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999876532       233333332  56789999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|++|||||+.......                                                        
T Consensus        75 ~~~~~~~id~vi~~ag~~~~~~~~--------------------------------------------------------   98 (248)
T PRK08251         75 FRDELGGLDRVIVNAGIGKGARLG--------------------------------------------------------   98 (248)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcC--------------------------------------------------------
Confidence            999999999999999986543322                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccC-CchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK-NHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~-~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         +.+.+.++.++++|+.+++.+++.++|+|++.+.++||++||..+..+.  + ....|++||++++++++.++.++.
T Consensus        99 ---~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~  173 (248)
T PRK08251         99 ---TGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL--PGVKAAYAASKAGVASLGEGLRAELA  173 (248)
T ss_pred             ---cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC--CCCcccHHHHHHHHHHHHHHHHHHhc
Confidence               6677889999999999999999999999998888999999999887663  4 367899999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ..||+|++|+||+ ++|++......     .....+|+++|+.++..+...
T Consensus       174 ~~~i~v~~v~pg~-v~t~~~~~~~~-----~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        174 KTPIKVSTIEPGY-IRSEMNAKAKS-----TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             ccCcEEEEEecCc-Ccchhhhcccc-----CCccCCHHHHHHHHHHHHhcC
Confidence            8999999999996 56655443221     234578999999999888653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=240.87  Aligned_cols=221  Identities=19%  Similarity=0.290  Sum_probs=181.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +++.|+++||||++|||++++++|+++|++|++++|+.+.       ..+..+++...+.++.++.+|+++++++.++++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEK-------CEELVDKIRADGGEAVAFPLDVTDPDSVKSFVA   79 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            4667899999999999999999999999999999987653       223444555566788899999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|++|||||........                                                       
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~~~~~~-------------------------------------------------------  104 (274)
T PRK07775         80 QAEEALGEIEVLVSGAGDTYFGKLH-------------------------------------------------------  104 (274)
T ss_pred             HHHHhcCCCCEEEECCCcCCCcccc-------------------------------------------------------
Confidence            9999999999999999976443322                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.++|+..+++|+.++++++++++|.|++++.++||++||..+..+  .++...|++||++++.++++++.++.
T Consensus       105 ----~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~~~~~~~  178 (274)
T PRK07775        105 ----EISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ--RPHMGAYGAAKAGLEAMVTNLQMELE  178 (274)
T ss_pred             ----cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC--CCCcchHHHHHHHHHHHHHHHHHHhc
Confidence                678889999999999999999999999998887899999999988766  36678899999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcC------------CCcccccccCChhhHHHHHHHhhcC
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTG------------GSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~------------~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++||++++|+||++ .|.+......            .......++..|+|+|++++++++.
T Consensus       179 ~~gi~v~~v~pG~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        179 GTGVRASIVHPGPT-LTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             ccCeEEEEEeCCcc-cCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence            99999999999963 3432111000            0011123467999999999999975

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=1.2e-29  Score=235.55  Aligned_cols=236  Identities=33%  Similarity=0.443  Sum_probs=196.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|.+|+++||||+++||+.+++.|+++|++|++++|+.++.       .....++...+.++.++.+|+++++++.++++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA-------EALAAELRAAGGEARVLVFDVSDEAAVRALIE   74 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH-------HHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            57789999999999999999999999999999999987643       23455566667889999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|++|||||.....+..                                                       
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~-------------------------------------------------------   99 (246)
T PRK05653         75 AAVEAFGALDILVNNAGITRDALLP-------------------------------------------------------   99 (246)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChh-------------------------------------------------------
Confidence            9999999999999999976543222                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.++|...++.|+.+++.++++++|+|.+.+.++||++||..+..+  .+++..|+.+|++++.+++++++++.
T Consensus       100 ----~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~--~~~~~~y~~sk~~~~~~~~~l~~~~~  173 (246)
T PRK05653        100 ----RMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG--NPGQTNYSAAKAGVIGFTKALALELA  173 (246)
T ss_pred             ----hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC--CCCCcHhHhHHHHHHHHHHHHHHHHh
Confidence                677889999999999999999999999998887789999999887765  36778999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcC------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTG------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.||++++|+||. +.++.......      ....+.....+|+|+++.+++++++....++|+++ +++|.
T Consensus       174 ~~~i~~~~i~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        174 SRGITVNAVAPGF-IDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             hcCeEEEEEEeCC-cCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            8999999999996 43433221100      00122345678999999999999987888999999 66653

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.97  E-value=8.3e-30  Score=224.68  Aligned_cols=239  Identities=19%  Similarity=0.256  Sum_probs=199.1

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      +..|+||+++|+|-.  +.|+..||+.|.++|++++.++.++.        ++...+++.+.-+....++||+++.++++
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~--------l~krv~~la~~~~s~~v~~cDV~~d~~i~   72 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER--------LEKRVEELAEELGSDLVLPCDVTNDESID   72 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHH--------HHHHHHHHHhhccCCeEEecCCCCHHHHH
Confidence            457899999999986  79999999999999999999988763        22334444443334677899999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+|||+-|..+.....                                                   
T Consensus        73 ~~f~~i~~~~g~lD~lVHsIaFa~k~el~---------------------------------------------------  101 (259)
T COG0623          73 ALFATIKKKWGKLDGLVHSIAFAPKEELK---------------------------------------------------  101 (259)
T ss_pred             HHHHHHHHhhCcccEEEEEeccCChHHhC---------------------------------------------------
Confidence            99999999999999999999976532211                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          +.+.+++.+.|...+++...+...+.+++.|+|..  +|+||.++-..+.+.  .|.+-.-+.+|++|++-+|.||
T Consensus       102 ----G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~--vPnYNvMGvAKAaLEasvRyLA  173 (259)
T COG0623         102 ----GDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERV--VPNYNVMGVAKAALEASVRYLA  173 (259)
T ss_pred             ----CcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceee--cCCCchhHHHHHHHHHHHHHHH
Confidence                23348999999999999999999999999999987  489999999888766  4777789999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .+++++|||||+|+-| ++.|-....+..        ....|.++..++|||+++.+||+|+.++-+||+++ +|.|+
T Consensus       174 ~dlG~~gIRVNaISAG-PIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         174 ADLGKEGIRVNAISAG-PIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             HHhCccCeEEeeeccc-chHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCc
Confidence            9999999999999999 577744322211        22357788899999999999999999999999999 66554

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8e-30  Score=230.42  Aligned_cols=196  Identities=17%  Similarity=0.177  Sum_probs=163.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||++|||++++++|+++ ++|++.+|+..                        .+++|+++++++++++++    
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------~~~~D~~~~~~~~~~~~~----   52 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------DVQVDITDPASIRALFEK----   52 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------ceEecCCChHHHHHHHHh----
Confidence            6999999999999999999999 99999998642                        257899999999988764    


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                      ++++|++|||||.....+.                                                           .+
T Consensus        53 ~~~id~lv~~ag~~~~~~~-----------------------------------------------------------~~   73 (199)
T PRK07578         53 VGKVDAVVSAAGKVHFAPL-----------------------------------------------------------AE   73 (199)
T ss_pred             cCCCCEEEECCCCCCCCch-----------------------------------------------------------hh
Confidence            4789999999997543222                                                           27


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeE
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA  250 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~  250 (406)
                      .+.++|++.+++|+.++++++++++|+|+++  ++|+++||..+..+  .+++..|++||+|+++|+++++.|+ ++||+
T Consensus        74 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~  148 (199)
T PRK07578         74 MTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEP--IPGGASAATVNGALEGFVKAAALEL-PRGIR  148 (199)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCC--CCCchHHHHHHHHHHHHHHHHHHHc-cCCeE
Confidence            7889999999999999999999999999754  79999999998876  4788999999999999999999999 88999


Q ss_pred             EEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         251 VNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       251 vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      ||+|+||+ +.|.+.... ..  .+.....+|+|+|+.++++++.   ..+|+.+.
T Consensus       149 v~~i~Pg~-v~t~~~~~~-~~--~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~  197 (199)
T PRK07578        149 INVVSPTV-LTESLEKYG-PF--FPGFEPVPAARVALAYVRSVEG---AQTGEVYK  197 (199)
T ss_pred             EEEEcCCc-ccCchhhhh-hc--CCCCCCCCHHHHHHHHHHHhcc---ceeeEEec
Confidence            99999996 555543211 10  1223457899999999999863   58888774

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=2.5e-29  Score=235.28  Aligned_cols=233  Identities=30%  Similarity=0.421  Sum_probs=191.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||+++||++++++|+++|++|++++|+.+..       +...+++...+.++.++.+|+++.++++++++.+.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGA-------EAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAA   73 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999986542       23344455556788899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||........                                                          
T Consensus        74 ~~~~~~d~vi~~a~~~~~~~~~----------------------------------------------------------   95 (255)
T TIGR01963        74 AEFGGLDILVNNAGIQHVAPIE----------------------------------------------------------   95 (255)
T ss_pred             HhcCCCCEEEECCCCCCCCCcc----------------------------------------------------------
Confidence            9999999999999976443222                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +.++++++.++++|+.+++.+++.++|.|++.+.++||++||..+..+  .+++..|+++|++++.++++++.++.+.+
T Consensus        96 -~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~--~~~~~~y~~sk~a~~~~~~~~~~~~~~~~  172 (255)
T TIGR01963        96 -EFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA--SPFKSAYVAAKHGLIGLTKVLALEVAAHG  172 (255)
T ss_pred             -cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC--CCCCchhHHHHHHHHHHHHHHHHHhhhcC
Confidence             667888999999999999999999999999888889999999887766  46788999999999999999999998899


Q ss_pred             eEEEEecchhhhhHHHHHH-hcCC-----------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         249 IAVNALWPRTAIYTAAIEM-LTGG-----------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~-~~~~-----------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |+++.++||+ +.+++... ....                 ...+...+.+++|+|+++++++++....++|+.+ +++|
T Consensus       173 i~v~~i~pg~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       173 ITVNAICPGY-VRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  251 (255)
T ss_pred             eEEEEEecCc-cccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence            9999999997 44443221 1100                 0112234678999999999999876677899977 6665


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      +
T Consensus       252 ~  252 (255)
T TIGR01963       252 W  252 (255)
T ss_pred             c
Confidence            4

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3e-29  Score=236.05  Aligned_cols=237  Identities=25%  Similarity=0.412  Sum_probs=190.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +..+++|+++||||++|||+.++++|+++|++|++++|+.+..+       +..++..  ..++.++.+|++++++++++
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~--~~~~~~~~~D~~~~~~~~~~   76 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALA-------ATAARLP--GAKVTATVADVADPAQVERV   76 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHh--cCceEEEEccCCCHHHHHHH
Confidence            45688999999999999999999999999999999999865321       2222222  12568899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||||.......                                                      
T Consensus        77 ~~~~~~~~~~~d~vi~~ag~~~~~~~------------------------------------------------------  102 (264)
T PRK12829         77 FDTAVERFGGLDVLVNNAGIAGPTGG------------------------------------------------------  102 (264)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCC------------------------------------------------------
Confidence            99999999999999999997633221                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                          +...+.++|.+++++|+.+++.+++.+++.+...+. ++|+++||..+..+  .+++..|+++|++++.+++.++.
T Consensus       103 ----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~--~~~~~~y~~~K~a~~~~~~~l~~  176 (264)
T PRK12829        103 ----IDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG--YPGRTPYAASKWAVVGLVKSLAI  176 (264)
T ss_pred             ----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC--CCCCchhHHHHHHHHHHHHHHHH
Confidence                126778899999999999999999999999988765 78999999887765  46778899999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC-----------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG-----------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-----------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ++...+|++++|.||+ +.+++.+.....                 ...+..++.+++|+|+++++++++....++|+.+
T Consensus       177 ~~~~~~i~~~~l~pg~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~  255 (264)
T PRK12829        177 ELGPLGIRVNAILPGI-VRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAI  255 (264)
T ss_pred             HHhhcCeEEEEEecCC-cCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEE
Confidence            9988899999999996 444443322110                 0012235678999999999999876778899988


Q ss_pred             -EehhH
Q psy6113         306 -IDDEV  310 (406)
Q Consensus       306 -~d~g~  310 (406)
                       +++|.
T Consensus       256 ~i~~g~  261 (264)
T PRK12829        256 SVDGNV  261 (264)
T ss_pred             EeCCCc
Confidence             66653

>KOG1611|consensus

Probab=99.97  E-value=1.1e-29  Score=223.76  Aligned_cols=224  Identities=25%  Similarity=0.292  Sum_probs=178.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKD-GANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      -|.++||||++|||+.++++|.+. |..+++. +|++++..       +..++......+++.+++|+++.+++..++++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~-------~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~   75 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAA-------TELALKSKSDSRVHIIQLDVTCDESIDNFVQE   75 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhh-------HHHHHhhccCCceEEEEEecccHHHHHHHHHH
Confidence            366999999999999999999976 5555554 55566421       11222223478999999999999999999999


Q ss_pred             HHHh--cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          87 AVDK--FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        87 i~~~--~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+-  ..++|+||||||+.......                                                      
T Consensus        76 V~~iVg~~GlnlLinNaGi~~~y~~~------------------------------------------------------  101 (249)
T KOG1611|consen   76 VEKIVGSDGLNLLINNAGIALSYNTV------------------------------------------------------  101 (249)
T ss_pred             HHhhcccCCceEEEeccceeeecccc------------------------------------------------------
Confidence            9988  45899999999997654432                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-----------CeEEEeCCCCCCCCC-ccCCchhhhHhhHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-----------AHILNISPPLNLNPF-WFKNHVAYTISKYG  232 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-----------g~Iv~vsS~~~~~~~-~~~~~~~Y~asKaa  232 (406)
                          .+.+.+.|.+.+++|..|+..++|+++|++++...           +.|||+||..+..+. ...++.+|.+||+|
T Consensus       102 ----~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaA  177 (249)
T KOG1611|consen  102 ----LKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAA  177 (249)
T ss_pred             ----cCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHH
Confidence                26778889999999999999999999999998643           489999998765443 23467899999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      +++|+|+++.|+++.+|-|..+|||| +.|+|..         .....+|||-+..++.-.......-+|.++ +|
T Consensus       178 lN~f~ksls~dL~~~~ilv~sihPGw-V~TDMgg---------~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  178 LNMFAKSLSVDLKDDHILVVSIHPGW-VQTDMGG---------KKAALTVEESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             HHHHHHHhhhhhcCCcEEEEEecCCe-EEcCCCC---------CCcccchhhhHHHHHHHHHhcCcccCcceEccC
Confidence            99999999999999999999999998 5664421         234578999888888877766666777777 44

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=235.92  Aligned_cols=217  Identities=30%  Similarity=0.424  Sum_probs=179.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++++||||++|||+++++.|+++|++|++++|+.+..       +...+++...+.++.++.+|++++++++++++++.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   73 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL-------ASLAQELADHGGEALVVPTDVSDAEACERLIEAAV   73 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999986542       23445555667788899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      ++++++|++|||||........                                                          
T Consensus        74 ~~~~~id~vi~~ag~~~~~~~~----------------------------------------------------------   95 (263)
T PRK06181         74 ARFGGIDILVNNAGITMWSRFD----------------------------------------------------------   95 (263)
T ss_pred             HHcCCCCEEEECCCcccccchh----------------------------------------------------------
Confidence            9999999999999976443322                                                          


Q ss_pred             CCC-chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         169 ANT-PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       169 ~~~-~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                       +. +.+++.+.+++|+.+++.+++.+.|+|.++. ++||++||..+..+  .+++..|++||+++++++++++.++.++
T Consensus        96 -~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~iv~~sS~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~~~~~  171 (263)
T PRK06181         96 -ELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGLTG--VPTRSGYAASKHALHGFFDSLRIELADD  171 (263)
T ss_pred             -ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CEEEEEecccccCC--CCCccHHHHHHHHHHHHHHHHHHHhhhc
Confidence             55 7889999999999999999999999997654 89999999988766  4678899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCCC-----cc--cccccCChhhHHHHHHHhhcC
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGGS-----AD--AKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~~-----~~--~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +|++|+|.||+ +.|.+.+......     ..  ...++.+|+|+|+.+++++..
T Consensus       172 ~i~~~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        172 GVAVTVVCPGF-VATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             CceEEEEecCc-cccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence            99999999996 4554433221110     01  113568999999999999975

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-29  Score=237.64  Aligned_cols=210  Identities=19%  Similarity=0.214  Sum_probs=171.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|++++|+.++.           +++...  .+.++.+|+++.++++++++.+.+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-----------~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~   68 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV-----------EALAAA--GFTAVQLDVNDGAALARLAEELEA   68 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----------HHHHHC--CCeEEEeeCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999986531           222222  356788999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|++|||||.....+..                                                           
T Consensus        69 ~~~~id~vi~~ag~~~~~~~~-----------------------------------------------------------   89 (274)
T PRK05693         69 EHGGLDVLINNAGYGAMGPLL-----------------------------------------------------------   89 (274)
T ss_pred             hcCCCCEEEECCCCCCCCCcc-----------------------------------------------------------
Confidence            999999999999976443322                                                           


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|+..+++|+.|++.++++++|+|+++ .++||++||..+..+  .++...|++||++++.++++++.|++++||
T Consensus        90 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi  166 (274)
T PRK05693         90 DGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLV--TPFAGAYCASKAAVHALSDALRLELAPFGV  166 (274)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCC--CCCccHHHHHHHHHHHHHHHHHHHhhhhCe
Confidence            77889999999999999999999999999765 489999999998876  467889999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCCC------ccc---------------ccccCChhhHHHHHHHhhcC
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGGS------ADA---------------KATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~~------~~~---------------~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +|++|+||+ +.|++.+......      ..+               .....+|+++|+.++..+..
T Consensus       167 ~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        167 QVMEVQPGA-IASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             EEEEEecCc-cccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            999999996 5665543221100      000               01235799999999888764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-29  Score=267.65  Aligned_cols=223  Identities=26%  Similarity=0.354  Sum_probs=185.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.       +++..+++...+.++.++.+|++|.+++++++
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  439 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA-------LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTV  439 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998754       33455566666778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|++|||||+........                                                     
T Consensus       440 ~~~~~~~g~id~li~~Ag~~~~~~~~~-----------------------------------------------------  466 (657)
T PRK07201        440 KDILAEHGHVDYLVNNAGRSIRRSVEN-----------------------------------------------------  466 (657)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhh-----------------------------------------------------
Confidence            999999999999999999754322110                                                     


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          ...+.++++.++++|+.+++.+++.++|+|++++.++||++||..+..+  .++.+.|++||+++++|+++++.|+
T Consensus       467 ----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  540 (657)
T PRK07201        467 ----STDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN--APRFSAYVASKAALDAFSDVAASET  540 (657)
T ss_pred             ----cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC--CCCcchHHHHHHHHHHHHHHHHHHH
Confidence                0123578999999999999999999999999988899999999988876  4678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCC
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +++||+||+|+||+ +.|++....   .........+|+++|+.++..+.+..
T Consensus       541 ~~~~i~v~~v~pg~-v~T~~~~~~---~~~~~~~~~~~~~~a~~i~~~~~~~~  589 (657)
T PRK07201        541 LSDGITFTTIHMPL-VRTPMIAPT---KRYNNVPTISPEEAADMVVRAIVEKP  589 (657)
T ss_pred             HhhCCcEEEEECCc-CcccccCcc---ccccCCCCCCHHHHHHHHHHHHHhCC
Confidence            99999999999996 666553321   11112345789999999999775433

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=231.12  Aligned_cols=216  Identities=23%  Similarity=0.280  Sum_probs=171.2

Q ss_pred             EEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcC
Q psy6113          13 FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFG   92 (406)
Q Consensus        13 lVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g   92 (406)
                      +||||++|||++++++|+++|++|++++|+.++.       ....++++ .+.++.++.+|++++++++++++.    ++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~----~~   68 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRL-------AAAARALG-GGAPVRTAALDITDEAAVDAFFAE----AG   68 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh----cC
Confidence            6999999999999999999999999999986532       22333333 256788899999999999888775    47


Q ss_pred             CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCc
Q psy6113          93 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTP  172 (406)
Q Consensus        93 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~  172 (406)
                      ++|++|||||.....+.                                                           .+.+
T Consensus        69 ~id~li~~ag~~~~~~~-----------------------------------------------------------~~~~   89 (230)
T PRK07041         69 PFDHVVITAADTPGGPV-----------------------------------------------------------RALP   89 (230)
T ss_pred             CCCEEEECCCCCCCCCh-----------------------------------------------------------hhCC
Confidence            89999999997654332                                                           2778


Q ss_pred             hhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEE
Q psy6113         173 LKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN  252 (406)
Q Consensus       173 ~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn  252 (406)
                      .++|++++++|+.+++++++  .+.+.  +.++||++||..+..+  .++...|++||+++++++++++.|+.+  ||||
T Consensus        90 ~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~  161 (230)
T PRK07041         90 LAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRP--SASGVLQGAINAALEALARGLALELAP--VRVN  161 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCC--CCcchHHHHHHHHHHHHHHHHHHHhhC--ceEE
Confidence            89999999999999999999  45553  4589999999998876  467889999999999999999999975  9999


Q ss_pred             EecchhhhhHHHHHHhcCCC----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         253 ALWPRTAIYTAAIEMLTGGS----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       253 ~v~PG~~~~t~~~~~~~~~~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+ +.|++........          ..+..+..+|+|+|+++++|+++  .+++|+.+ +++|.
T Consensus       162 ~i~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg~  227 (230)
T PRK07041        162 TVSPGL-VDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGGH  227 (230)
T ss_pred             EEeecc-cccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCCe
Confidence            999996 5555543221110          01233556899999999999974  58999988 66653

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.3e-29  Score=229.09  Aligned_cols=228  Identities=29%  Similarity=0.406  Sum_probs=183.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+.+.+++++||||+++||++++++|+++|++|++++|+.++..       +..+++... .++.++.+|+++.++++++
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~-------~~~~~l~~~-~~~~~~~~D~~~~~~~~~~   72 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELE-------EAAAELNNK-GNVLGLAADVRDEADVQRA   72 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHH-------HHHHHHhcc-CcEEEEEccCCCHHHHHHH
Confidence            34577999999999999999999999999999999999865422       233444333 5688899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++|||+|.......                                                      
T Consensus        73 ~~~~~~~~~~~d~vi~~ag~~~~~~~------------------------------------------------------   98 (237)
T PRK07326         73 VDAIVAAFGGLDVLIANAGVGHFAPV------------------------------------------------------   98 (237)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCch------------------------------------------------------
Confidence            99999999999999999997543322                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++++.++++|+.+++.+++++++.|. .+.++||++||..+..+  .++...|+++|+++.++++.++.|
T Consensus        99 -----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~--~~~~~~y~~sk~a~~~~~~~~~~~  170 (237)
T PRK07326         99 -----EELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNF--FAGGAAYNASKFGLVGFSEAAMLD  170 (237)
T ss_pred             -----hhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccC--CCCCchHHHHHHHHHHHHHHHHHH
Confidence                 2778899999999999999999999999994 44589999999987765  367788999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      +++.|+++++|+||+ +.|.+......   .......+|+|+++.++++++..+..+.+.+.
T Consensus       171 ~~~~gi~v~~v~pg~-~~t~~~~~~~~---~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~  228 (237)
T PRK07326        171 LRQYGIKVSTIMPGS-VATHFNGHTPS---EKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIE  228 (237)
T ss_pred             hcccCcEEEEEeecc-ccCcccccccc---hhhhccCCHHHHHHHHHHHHhCCccccccceE
Confidence            999999999999997 44433221111   11122468999999999999876655555443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=1e-28  Score=228.76  Aligned_cols=231  Identities=31%  Similarity=0.425  Sum_probs=189.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++|||++++||..++++|+++|++|++++|+...      ......+.+...+.++.++.+|++++++++++++.+.+.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEE------GAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL   74 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchh------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999987632      1223445566667788999999999999999999999999


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                      +++|++|||||........                                                           +.
T Consensus        75 ~~id~vi~~ag~~~~~~~~-----------------------------------------------------------~~   95 (239)
T TIGR01830        75 GPIDILVNNAGITRDNLLM-----------------------------------------------------------RM   95 (239)
T ss_pred             CCCCEEEECCCCCCCCChh-----------------------------------------------------------hC
Confidence            9999999999975432222                                                           66


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEE
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV  251 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v  251 (406)
                      +.++++..+++|+.+++.+++.+++++.+.+.+++|++||..+..+  .+++..|+++|++++.+++.++.++...|+++
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g--~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~  173 (239)
T TIGR01830        96 KEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMG--NAGQANYAASKAGVIGFTKSLAKELASRNITV  173 (239)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCC--CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            7788999999999999999999999998877789999999988876  36788999999999999999999999999999


Q ss_pred             EEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         252 NALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       252 n~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+ +.+++.......      ...+..+..+++|+|+.+++++++...+.+|+++ +++|.
T Consensus       174 ~~i~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g~  238 (239)
T TIGR01830       174 NAVAPGF-IDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGGM  238 (239)
T ss_pred             EEEEECC-CCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCCc
Confidence            9999996 455433222111      0112345678999999999999877778999988 55543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5.8e-29  Score=230.62  Aligned_cols=231  Identities=20%  Similarity=0.263  Sum_probs=182.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||.++++.|+++|++|++++|+.++.+       ...+++... +++.++.+|+++++++++++
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~   72 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLK-------RMKKTLSKY-GNIHYVVGDVSSTESARNVI   72 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHHhc-CCeEEEECCCCCHHHHHHHH
Confidence            3688999999999999999999999999999999999865422       222333332 36788999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++...++++|.+|+|+|......                                                        
T Consensus        73 ~~~~~~~~~id~ii~~ag~~~~~~--------------------------------------------------------   96 (238)
T PRK05786         73 EKAAKVLNAIDGLVVTVGGYVEDT--------------------------------------------------------   96 (238)
T ss_pred             HHHHHHhCCCCEEEEcCCCcCCCc--------------------------------------------------------
Confidence            999888999999999998653221                                                        


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           ..+.++++.++++|+.+++.+.+.++|+|.+  .+++|++||..+..+. .+....|++||++++.++++++.++
T Consensus        97 -----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~-~~~~~~Y~~sK~~~~~~~~~~~~~~  168 (238)
T PRK05786         97 -----VEEFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKA-SPDQLSYAVAKAGLAKAVEILASEL  168 (238)
T ss_pred             -----hHHHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccC-CCCchHHHHHHHHHHHHHHHHHHHH
Confidence                 1123788999999999999999999999865  3899999998775322 3567889999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHH--hcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEM--LTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~--~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .++||++++|+||++ .+++...  +... ........+|+++++.+++++++.+.+++|+++ +|+|
T Consensus       169 ~~~gi~v~~i~pg~v-~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        169 LGRGIRVNGIAPTTI-SGDFEPERNWKKL-RKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG  234 (238)
T ss_pred             hhcCeEEEEEecCcc-CCCCCchhhhhhh-ccccCCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence            999999999999974 4422100  0000 011123568999999999999988888999988 5554

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.1e-29  Score=230.34  Aligned_cols=211  Identities=16%  Similarity=0.144  Sum_probs=175.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||++|||++++++|+++|++|++++|+.++.+       +..+++.. .+.++.++++|++++++++++++++.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLE-------RLADDLRARGAVAVSTHELDILDTASHAAFLDSLP   74 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHH-------HHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh
Confidence            68999999999999999999999999999999876422       23333333 34588999999999999999999876


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +   .+|++|||||.......                                                           
T Consensus        75 ~---~~d~vv~~ag~~~~~~~-----------------------------------------------------------   92 (243)
T PRK07102         75 A---LPDIVLIAVGTLGDQAA-----------------------------------------------------------   92 (243)
T ss_pred             h---cCCEEEECCcCCCCccc-----------------------------------------------------------
Confidence            5   46999999997544332                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.+++.+.+++|+.+++.+++++.|+|.+++.++||++||..+..+  .++...|+++|+++.+++++++.|+++.|
T Consensus        93 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~el~~~g  170 (243)
T PRK07102         93 CEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG--RASNYVYGSAKAALTAFLSGLRNRLFKSG  170 (243)
T ss_pred             ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC--CCCCcccHHHHHHHHHHHHHHHHHhhccC
Confidence            2678889999999999999999999999999988899999999988766  36778999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      |+|++|+||+ +.|++.....    .+.....+|+++|+.++.+++..
T Consensus       171 i~v~~v~pg~-v~t~~~~~~~----~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        171 VHVLTVKPGF-VRTPMTAGLK----LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             cEEEEEecCc-ccChhhhccC----CCccccCCHHHHHHHHHHHHhCC
Confidence            9999999996 5665443221    12344678999999999999754

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=229.86  Aligned_cols=212  Identities=20%  Similarity=0.265  Sum_probs=171.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH-HHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA-AVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~-i~~   89 (406)
                      +++||||++|||+++|++|+++|++|++++|+.++.         .   ....+.++.++.+|+++.+++++++++ +.+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~---------~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   70 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS---------L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLA   70 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh---------h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHH
Confidence            699999999999999999999999999999976530         1   123456788999999999999998877 555


Q ss_pred             hc---CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          90 KF---GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        90 ~~---g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .+   +++|++|||||.......                                                         
T Consensus        71 ~~~~~~~~~~~v~~ag~~~~~~~---------------------------------------------------------   93 (243)
T PRK07023         71 AFVDGASRVLLINNAGTVEPIGP---------------------------------------------------------   93 (243)
T ss_pred             HhccCCCceEEEEcCcccCCCCc---------------------------------------------------------
Confidence            55   379999999997543211                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                       +.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+  .+++..|+++|++++++++.++.+ .+
T Consensus        94 -~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~-~~  169 (243)
T PRK07023         94 -LATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA--YAGWSVYCATKAALDHHARAVALD-AN  169 (243)
T ss_pred             -cccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC--CCCchHHHHHHHHHHHHHHHHHhc-CC
Confidence             12678899999999999999999999999999887899999999988876  478899999999999999999999 78


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHH-HHHHhhcCC
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMAD-AAYYILSSN  296 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~-~v~~L~s~~  296 (406)
                      .||++|+|+||+ ++|++........            ..+..+..+|+|+|+ .+.+|+++.
T Consensus       170 ~~i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        170 RALRIVSLAPGV-VDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             CCcEEEEecCCc-cccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            899999999996 6666544332111            012245679999999 566777654

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=1.8e-28  Score=228.42  Aligned_cols=235  Identities=26%  Similarity=0.320  Sum_probs=183.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+++++++||||+++||++++++|+++|++|++++|+.+..      .+.....+... +..+.++.+|+++.+++.++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   75 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAE------ADALAAELNALRPGSAAALQADLLDPDALPEL   75 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH------HHHHHHHHHhhcCCceEEEEcCCCCHHHHHHH
Confidence            346789999999999999999999999999999999875421      12233334333 34688899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+.++++|++|||||.....+..                                                     
T Consensus        76 ~~~~~~~~~~~d~vi~~ag~~~~~~~~-----------------------------------------------------  102 (249)
T PRK09135         76 VAACVAAFGRLDALVNNASSFYPTPLG-----------------------------------------------------  102 (249)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChh-----------------------------------------------------
Confidence            999999999999999999976543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++++.++++|+.+++.+.+++.|++.+++ +++++++|..+..+  .++...|++||++++.+++.++.+
T Consensus       103 ------~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~  173 (249)
T PRK09135        103 ------SITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-GAIVNITDIHAERP--LKGYPVYCAAKAALEMLTRSLALE  173 (249)
T ss_pred             ------hCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-eEEEEEeChhhcCC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence                  567788999999999999999999999987654 78999888766655  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.+ +|++++|.||++ .++........       ...+.....+|+|+|+++.+++.+ ..+.+|+.+ +++|.
T Consensus       174 ~~~-~i~~~~v~pg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~~~i~~g~  245 (249)
T PRK09135        174 LAP-EVRVNAVAPGAI-LWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQILAVDGGR  245 (249)
T ss_pred             HCC-CCeEEEEEeccc-cCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcEEEECCCe
Confidence            965 799999999964 44332110000       011233456899999999999875 556799987 66553

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-28  Score=232.02  Aligned_cols=215  Identities=21%  Similarity=0.253  Sum_probs=173.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|+++||||++|||++++++|+++|++|++++|+.+..       ...   ....+.++.++.+|++|.++++++++++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~-------~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   71 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL-------DDL---KARYGDRLWVLQLDVTDSAAVRAVVDRAF   71 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHH---HHhccCceEEEEccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999976431       111   12224578889999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|+||||||........                                                          
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~----------------------------------------------------------   93 (276)
T PRK06482         72 AALGRIDVVVSNAGYGLFGAAE----------------------------------------------------------   93 (276)
T ss_pred             HHcCCCCEEEECCCCCCCcccc----------------------------------------------------------
Confidence            9999999999999986543332                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +.+.++|+..+++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++.+++++|
T Consensus        94 -~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g  170 (276)
T PRK06482         94 -ELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA--YPGFSLYHATKWGIEGFVEAVAQEVAPFG  170 (276)
T ss_pred             -cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC--CCCCchhHHHHHHHHHHHHHHHHHhhccC
Confidence             677889999999999999999999999999888899999999887765  46788999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCC------cc------------cccccCChhhHHHHHHHhhcC
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGS------AD------------AKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~------~~------------~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      |+++.++||. +.|.+........      ..            ......+|++++++++..+..
T Consensus       171 i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~  234 (276)
T PRK06482        171 IEFTIVEPGP-ARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQ  234 (276)
T ss_pred             cEEEEEeCCc-cccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcC
Confidence            9999999996 4443322111000      00            001125789999998888753

>KOG1209|consensus

Probab=99.96  E-value=2.5e-29  Score=218.70  Aligned_cols=181  Identities=22%  Similarity=0.264  Sum_probs=155.9

Q ss_pred             CcEEEEecCC-chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas-~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.++|||++ ||||.++|++|++.|+.|+.++|+.++...+          ..+.  .+....+|+++++++..+..++
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L----------~~~~--gl~~~kLDV~~~~~V~~v~~ev   74 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQL----------AIQF--GLKPYKLDVSKPEEVVTVSGEV   74 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhH----------HHhh--CCeeEEeccCChHHHHHHHHHH
Confidence            5778888876 8999999999999999999999998864321          1122  3778899999999999999999


Q ss_pred             HH-hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          88 VD-KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        88 ~~-~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .+ .+|++|+|+||||.....+..                                                        
T Consensus        75 r~~~~Gkld~L~NNAG~~C~~Pa~--------------------------------------------------------   98 (289)
T KOG1209|consen   75 RANPDGKLDLLYNNAGQSCTFPAL--------------------------------------------------------   98 (289)
T ss_pred             hhCCCCceEEEEcCCCCCcccccc--------------------------------------------------------
Confidence            88 788999999999987665554                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++.+++|++|++|++.++|++...+.+ ..|.|||+.|..+..|  +|..+.|++||+|+++++++|..|+++
T Consensus        99 ---d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKGtIVnvgSl~~~vp--fpf~~iYsAsKAAihay~~tLrlEl~P  172 (289)
T KOG1209|consen   99 ---DATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKGTIVNVGSLAGVVP--FPFGSIYSASKAAIHAYARTLRLELKP  172 (289)
T ss_pred             ---cCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccceEEEecceeEEec--cchhhhhhHHHHHHHHhhhhcEEeeec
Confidence               8999999999999999999999999844444 4599999999999988  577889999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHH
Q psy6113         247 DNIAVNALWPRTAIYTAA  264 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~  264 (406)
                      .||+|..+.||. +.|..
T Consensus       173 Fgv~Vin~itGG-v~T~I  189 (289)
T KOG1209|consen  173 FGVRVINAITGG-VATDI  189 (289)
T ss_pred             cccEEEEecccc-eeccc
Confidence            999999999996 55543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-28  Score=228.35  Aligned_cols=204  Identities=18%  Similarity=0.197  Sum_probs=165.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++||||++|||++++++|+++|++|++++|+.++           .+++...+.++.++.+|+++.++++++++++..
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   70 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV-----------LDELHTQSANIFTLAFDVTDHPGTKAALSQLPF   70 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH-----------HHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc
Confidence            789999999999999999999999999999998643           222333345688899999999999999887642


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         .+|++|||||.......                                                           .
T Consensus        71 ---~~d~~i~~ag~~~~~~~-----------------------------------------------------------~   88 (240)
T PRK06101         71 ---IPELWIFNAGDCEYMDD-----------------------------------------------------------G   88 (240)
T ss_pred             ---CCCEEEEcCcccccCCC-----------------------------------------------------------C
Confidence               47999999986432111                                                           1


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|++++++|+.+++++++++.|+|.+  .++||++||..+..+  .++...|++||+++++++++++.|+.++||
T Consensus        89 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi  164 (240)
T PRK06101         89 KVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELA--LPRAEAYGASKAAVAYFARTLQLDLRPKGI  164 (240)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccC--CCCCchhhHHHHHHHHHHHHHHHHHHhcCc
Confidence            5788899999999999999999999999964  368999999988876  467889999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcC
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++++|+||+ +.|++.+..    ........+|+++|+.++..+..
T Consensus       165 ~v~~v~pg~-i~t~~~~~~----~~~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        165 EVVTVFPGF-VATPLTDKN----TFAMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             eEEEEeCCc-CCCCCcCCC----CCCCCcccCHHHHHHHHHHHHhc
Confidence            999999996 556442211    11112346899999999887764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=1.8e-28  Score=214.96  Aligned_cols=165  Identities=25%  Similarity=0.417  Sum_probs=146.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||++|||++++++|+++|+ +|++++|+..     .+..++...++...+.++.++++|++++++++++++++.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~-----~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSED-----SEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI   75 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCH-----HHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccc-----ccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999976 7788888811     122445667777788999999999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||........                                                          
T Consensus        76 ~~~~~ld~li~~ag~~~~~~~~----------------------------------------------------------   97 (167)
T PF00106_consen   76 KRFGPLDILINNAGIFSDGSLD----------------------------------------------------------   97 (167)
T ss_dssp             HHHSSESEEEEECSCTTSBSGG----------------------------------------------------------
T ss_pred             cccccccccccccccccccccc----------------------------------------------------------
Confidence            9999999999999987744433                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                       +.+.++|++++++|+.+++.+.++++|    ++.++||++||..+..+  .+++..|++||+|+.+|+++++.|+
T Consensus        98 -~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~--~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen   98 -DLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRG--SPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             -GSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSS--STTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccC--CCCChhHHHHHHHHHHHHHHHHHhc
Confidence             788999999999999999999999999    45799999999999988  5889999999999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1014|consensus

Probab=99.96  E-value=2.4e-28  Score=225.91  Aligned_cols=212  Identities=25%  Similarity=0.280  Sum_probs=173.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++||||+.|||+++|++||++|.+|++++|+.++++       +..+|+.+. +.++.++.+|.++.+++   .++
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~-------~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~  117 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLE-------AVAKEIEEKYKVEVRIIAIDFTKGDEV---YEK  117 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHH-------HHHHHHHHHhCcEEEEEEEecCCCchh---HHH
Confidence            3599999999999999999999999999999999998854       566666553 56888999999998873   333


Q ss_pred             HHHhc--CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          87 AVDKF--GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+..  ..|-+||||+|+....+.                                                       
T Consensus       118 i~~~l~~~~VgILVNNvG~~~~~P~-------------------------------------------------------  142 (312)
T KOG1014|consen  118 LLEKLAGLDVGILVNNVGMSYDYPE-------------------------------------------------------  142 (312)
T ss_pred             HHHHhcCCceEEEEecccccCCCcH-------------------------------------------------------
Confidence            33333  357799999998764321                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                        .|.+.+.+.+...+.+|+.++..+++.++|.|.+++.|-|||+||.++..|  +|.++.|++||+.+..|+++|+.|+
T Consensus       143 --~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p--~p~~s~ysasK~~v~~~S~~L~~Ey  218 (312)
T KOG1014|consen  143 --SFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP--TPLLSVYSASKAFVDFFSRCLQKEY  218 (312)
T ss_pred             --HHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc--ChhHHHHHHHHHHHHHHHHHHHHHH
Confidence              233777778999999999999999999999999999999999999999988  6899999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhc
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s  294 (406)
                      ..+||.|-+|.|.. +.|.|.....     +.....+|+..|...+.-.-
T Consensus       219 ~~~gI~Vq~v~p~~-VaTkm~~~~~-----~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  219 ESKGIFVQSVIPYL-VATKMAKYRK-----PSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             HhcCeEEEEeehhh-eeccccccCC-----CCCcCcCHHHHHHHHHhhcC
Confidence            99999999999996 5554432221     22334578888888777654

>KOG1610|consensus

Probab=99.96  E-value=1.2e-27  Score=221.41  Aligned_cols=189  Identities=22%  Similarity=0.311  Sum_probs=161.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+..+|.|+|||+-+|+|+.+|++|.++|++|+..+.+++..+.       ...+..  .++...+++|++++++++++.
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~-------L~~~~~--s~rl~t~~LDVT~~esi~~a~   95 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAES-------LRGETK--SPRLRTLQLDVTKPESVKEAA   95 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHH-------Hhhhhc--CCcceeEeeccCCHHHHHHHH
Confidence            46789999999999999999999999999999999977665332       122221  567888899999999999999


Q ss_pred             HHHHHhcC--CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          85 NAAVDKFG--GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        85 ~~i~~~~g--~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +.+.+..+  ++-.||||||+......                                                     
T Consensus        96 ~~V~~~l~~~gLwglVNNAGi~~~~g~-----------------------------------------------------  122 (322)
T KOG1610|consen   96 QWVKKHLGEDGLWGLVNNAGISGFLGP-----------------------------------------------------  122 (322)
T ss_pred             HHHHHhcccccceeEEeccccccccCc-----------------------------------------------------
Confidence            99988764  58888888887654332                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+-.+.++|+.++++|+.|++.++++++|++++++ |||||+||..|..+  .|...+|++||+|++.|+.+|.+
T Consensus       123 -----~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~--~p~~g~Y~~SK~aVeaf~D~lR~  194 (322)
T KOG1610|consen  123 -----DEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVA--LPALGPYCVSKFAVEAFSDSLRR  194 (322)
T ss_pred             -----cccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCcc--CcccccchhhHHHHHHHHHHHHH
Confidence                 23789999999999999999999999999999986 99999999999987  47888999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAA  264 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~  264 (406)
                      |+.++||.|..|.||. ..|+.
T Consensus       195 EL~~fGV~VsiiePG~-f~T~l  215 (322)
T KOG1610|consen  195 ELRPFGVKVSIIEPGF-FKTNL  215 (322)
T ss_pred             HHHhcCcEEEEeccCc-ccccc
Confidence            9999999999999994 55543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=2.8e-28  Score=227.14  Aligned_cols=196  Identities=19%  Similarity=0.199  Sum_probs=157.5

Q ss_pred             HHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEeccccc
Q psy6113          25 IALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        25 ia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~  104 (406)
                      +|++|+++|++|++++|+.++..                  ...++++|+++.++++++++++.   +++|+||||||+.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~   59 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVP   59 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCC
Confidence            47899999999999999875421                  02457899999999999998874   6899999999964


Q ss_pred             ccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhh
Q psy6113         105 SLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA  184 (406)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~  184 (406)
                      .                                                                   .+.|+.++++|+
T Consensus        60 ~-------------------------------------------------------------------~~~~~~~~~vN~   72 (241)
T PRK12428         60 G-------------------------------------------------------------------TAPVELVARVNF   72 (241)
T ss_pred             C-------------------------------------------------------------------CCCHHHhhhhch
Confidence            1                                                                   123788999999


Q ss_pred             hHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC-------------------------CccCCchhhhHhhHHHHHHHHH
Q psy6113         185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP-------------------------FWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       185 ~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~-------------------------~~~~~~~~Y~asKaal~~l~~~  239 (406)
                      .+++.+++.++|+|.+.  |+||++||..+...                         .+.++...|++||+|+++++++
T Consensus        73 ~~~~~l~~~~~~~~~~~--g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (241)
T PRK12428         73 LGLRHLTEALLPRMAPG--GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR  150 (241)
T ss_pred             HHHHHHHHHHHHhccCC--cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence            99999999999999653  89999999987631                         1246778999999999999999


Q ss_pred             HH-HhhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         240 MA-EEFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       240 la-~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++ .|++++|||||+|+||+ +.|++......        ....+..+..+|||+|++++||+++.+.+++|+.+ +|+|
T Consensus       151 la~~e~~~~girvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg  229 (241)
T PRK12428        151 QAQPWFGARGIRVNCVAPGP-VFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG  229 (241)
T ss_pred             HHHHhhhccCeEEEEeecCC-ccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence            99 99999999999999996 56655332111        11124456779999999999999988899999988 7777


Q ss_pred             HH
Q psy6113         310 VL  311 (406)
Q Consensus       310 ~~  311 (406)
                      ..
T Consensus       230 ~~  231 (241)
T PRK12428        230 LA  231 (241)
T ss_pred             hH
Confidence            54

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=4e-27  Score=218.41  Aligned_cols=207  Identities=24%  Similarity=0.285  Sum_probs=172.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      |+++.+|+++||||++|||+++|++|+++|+ +|++++|+.++..           +   .+.++.++.+|+++.+++++
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~-----------~---~~~~~~~~~~D~~~~~~~~~   66 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT-----------D---LGPRVVPLQLDVTDPASVAA   66 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh-----------h---cCCceEEEEecCCCHHHHHH
Confidence            4678899999999999999999999999999 9999999876421           1   35578899999999999888


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++.    ++++|++|||||......                                                      
T Consensus        67 ~~~~----~~~id~vi~~ag~~~~~~------------------------------------------------------   88 (238)
T PRK08264         67 AAEA----ASDVTILVNNAGIFRTGS------------------------------------------------------   88 (238)
T ss_pred             HHHh----cCCCCEEEECCCcCCCCC------------------------------------------------------
Confidence            7764    578999999999732221                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                          ++.+.+.++|...+++|+.+++.++++++|.+++.+.++||++||..+..+  .++...|+++|++++++++.++.
T Consensus        89 ----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~--~~~~~~y~~sK~a~~~~~~~l~~  162 (238)
T PRK08264         89 ----LLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN--FPNLGTYSASKAAAWSLTQALRA  162 (238)
T ss_pred             ----ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC--CCCchHhHHHHHHHHHHHHHHHH
Confidence                113778899999999999999999999999999888899999999888766  46788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++.+.||+++++.||. ++|++....       .....+|+++++.++..+...
T Consensus       163 ~~~~~~i~~~~v~pg~-v~t~~~~~~-------~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        163 ELAPQGTRVLGVHPGP-IDTDMAAGL-------DAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HhhhcCeEEEEEeCCc-ccccccccC-------CcCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999995 555442211       112578999999999887653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.1e-27  Score=218.55  Aligned_cols=197  Identities=14%  Similarity=0.115  Sum_probs=149.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.....          +... .+ ...++.+|+++.+++.+  
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~----------~~~~-~~-~~~~~~~D~~~~~~~~~--   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS----------ESND-ES-PNEWIKWECGKEESLDK--   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh----------hhhc-cC-CCeEEEeeCCCHHHHHH--
Confidence            3578999999999999999999999999999999999863210          1111 11 22567899999987653  


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                           .++++|+||||||+...   .                                                      
T Consensus        76 -----~~~~iDilVnnAG~~~~---~------------------------------------------------------   93 (245)
T PRK12367         76 -----QLASLDVLILNHGINPG---G------------------------------------------------------   93 (245)
T ss_pred             -----hcCCCCEEEECCccCCc---C------------------------------------------------------
Confidence                 46789999999996421   1                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc---CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHH---HH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS---NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC---AL  238 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~---~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l---~~  238 (406)
                           +.+.++|+.++++|+.+++.++++++|+|+++   +++.|+..||.++..+   ++...|++||+|+..+   .+
T Consensus        94 -----~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~---~~~~~Y~aSKaal~~~~~l~~  165 (245)
T PRK12367         94 -----RQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP---ALSPSYEISKRLIGQLVSLKK  165 (245)
T ss_pred             -----CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC---CCCchhHHHHHHHHHHHHHHH
Confidence                 56788999999999999999999999999874   2334545556555543   3567899999998654   45


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      .++.|+.+.||+|++++||+ +.|++.          .....+|+++|+.+++++...
T Consensus       166 ~l~~e~~~~~i~v~~~~pg~-~~t~~~----------~~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        166 NLLDKNERKKLIIRKLILGP-FRSELN----------PIGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             HHHHhhcccccEEEEecCCC-cccccC----------ccCCCCHHHHHHHHHHHHhcC
Confidence            55556678999999999996 555331          113578999999999998653

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=213.80  Aligned_cols=205  Identities=14%  Similarity=0.144  Sum_probs=162.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|++++|+.+..+           ++... .++.++.+|++|+++++++++.+.+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-----------~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-----------ALQAL-PGVHIEKLDMNDPASLDQLLQRLQG   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH-----------HHHhc-cccceEEcCCCCHHHHHHHHHHhhc
Confidence            68999999999999999999999999999999876522           12222 2567788999999999999998854


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                        +++|++|||||+......                                                         ++.
T Consensus        70 --~~id~vi~~ag~~~~~~~---------------------------------------------------------~~~   90 (225)
T PRK08177         70 --QRFDLLFVNAGISGPAHQ---------------------------------------------------------SAA   90 (225)
T ss_pred             --CCCCEEEEcCcccCCCCC---------------------------------------------------------Ccc
Confidence              589999999998643211                                                         123


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc-cCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW-FKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~-~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      +.+.+++...+++|+.+++.++++++|+|+++ .++|+++||..+..+.+ ..++..|+++|++++.|+++++.|++++|
T Consensus        91 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~  169 (225)
T PRK08177         91 DATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPT  169 (225)
T ss_pred             cCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCC
Confidence            77889999999999999999999999999764 47999999977654321 23567899999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      |+||+|+||+ +.|++..   .      ....++++.+..++.+....
T Consensus       170 i~v~~i~PG~-i~t~~~~---~------~~~~~~~~~~~~~~~~~~~~  207 (225)
T PRK08177        170 LTVLSMHPGW-VKTDMGG---D------NAPLDVETSVKGLVEQIEAA  207 (225)
T ss_pred             eEEEEEcCCc-eecCCCC---C------CCCCCHHHHHHHHHHHHHhC
Confidence            9999999996 5664421   1      11246777777777776543

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=2.3e-26  Score=215.52  Aligned_cols=217  Identities=20%  Similarity=0.245  Sum_probs=175.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||+++++.|+++|++|++++|+.++.+           .+...  .+..+.+|+++.++++.+++.+.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~-----------~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~   69 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVA-----------RMNSL--GFTGILLDLDDPESVERAADEVIA   69 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH-----------HHHhC--CCeEEEeecCCHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999875422           22222  367789999999999999998877


Q ss_pred             hc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          90 KF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        90 ~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      .. +++|.+|||||.....+.                                                           
T Consensus        70 ~~~~~~~~ii~~ag~~~~~~~-----------------------------------------------------------   90 (256)
T PRK08017         70 LTDNRLYGLFNNAGFGVYGPL-----------------------------------------------------------   90 (256)
T ss_pred             hcCCCCeEEEECCCCCCccch-----------------------------------------------------------
Confidence            54 689999999996543222                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.+++++++++|+.|++.+++.++|.|++.+.++||++||..+..+  .++...|++||++++.++++++.++.++|
T Consensus        91 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~  168 (256)
T PRK08017         91 STISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS--TPGRGAYAASKYALEAWSDALRMELRHSG  168 (256)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC--CCCccHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            2778899999999999999999999999999988899999999988766  47788999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCC-c----cc---ccccCChhhHHHHHHHhhcCCCCCcc
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGS-A----DA---KATSRKPEIMADAAYYILSSNPPSLT  301 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~-~----~~---~~~~~~pe~vA~~v~~L~s~~~~~~t  301 (406)
                      |++++|+||+ +.|.+........ .    .+   ...+.+|+|+|+.+..+++.....++
T Consensus       169 i~v~~v~pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~  228 (256)
T PRK08017        169 IKVSLIEPGP-IRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPKLR  228 (256)
T ss_pred             CEEEEEeCCC-cccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCCce
Confidence            9999999996 5554443322111 0    01   12347899999999999976554433

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-26  Score=216.21  Aligned_cols=212  Identities=22%  Similarity=0.218  Sum_probs=167.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||++++++|+++|++|++++|+.+..       .+..+.....+.++.++.+|+++++++.++++   
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV-------TALRAEAARRGLALRVEKLDLTDAIDRAQAAE---   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc---
Confidence            57899999999999999999999999999999986532       23334444556678899999999998877643   


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                         +++|+||||||.....+.                                                           
T Consensus        72 ---~~id~vi~~ag~~~~~~~-----------------------------------------------------------   89 (257)
T PRK09291         72 ---WDVDVLLNNAGIGEAGAV-----------------------------------------------------------   89 (257)
T ss_pred             ---CCCCEEEECCCcCCCcCc-----------------------------------------------------------
Confidence               489999999997654332                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.++|+..+++|+.+++.+++.++|.+.+++.++||++||..+..+  .++...|++||++++.+++.++.++.+.|
T Consensus        90 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g  167 (257)
T PRK09291         90 VDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT--GPFTGAYCASKHALEAIAEAMHAELKPFG  167 (257)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC--CCCcchhHHHHHHHHHHHHHHHHHHHhcC
Confidence            2788999999999999999999999999999888899999999888765  36778999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHH----hcC---CCc--------ccccccCChhhHHHHHHHhhcC
Q psy6113         249 IAVNALWPRTAIYTAAIEM----LTG---GSA--------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~----~~~---~~~--------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      |++++|+||++ .|.+.+.    +..   ...        .......+|+++++.++.++..
T Consensus       168 i~~~~v~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        168 IQVATVNPGPY-LTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             cEEEEEecCcc-cccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcC
Confidence            99999999964 4433211    100   000        0111235788888888777643

>KOG1210|consensus

Probab=99.95  E-value=1.5e-26  Score=213.59  Aligned_cols=215  Identities=24%  Similarity=0.247  Sum_probs=178.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-C-CeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-G-GNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g-~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +.++|||+|+|||+++|.++..+|++|.++.|+.+++.       ++..+++-. + ..+.+..+|++|.+++...++++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~-------~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l  106 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLL-------EAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL  106 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHH-------HHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence            78999999999999999999999999999999998754       344444332 1 23778899999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.++.+|.+|||||...+.-+.                                                         
T Consensus       107 ~~~~~~~d~l~~cAG~~v~g~f~---------------------------------------------------------  129 (331)
T KOG1210|consen  107 RDLEGPIDNLFCCAGVAVPGLFE---------------------------------------------------------  129 (331)
T ss_pred             hhccCCcceEEEecCcccccccc---------------------------------------------------------
Confidence            99999999999999988766554                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                        +.+.++++..+++|+.|.++++++.+|.|++.. .|+|+.+||..+..+  +.|+++|+++|+|+.+|+.++++|+.+
T Consensus       130 --~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~--i~GysaYs~sK~alrgLa~~l~qE~i~  205 (331)
T KOG1210|consen  130 --DLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG--IYGYSAYSPSKFALRGLAEALRQELIK  205 (331)
T ss_pred             --cCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC--cccccccccHHHHHHHHHHHHHHHHhh
Confidence              899999999999999999999999999999876 689999999999988  589999999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHH-hcCCCcc-----cccccCChhhHHHHHHHhh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEM-LTGGSAD-----AKATSRKPEIMADAAYYIL  293 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~-~~~~~~~-----~~~~~~~pe~vA~~v~~L~  293 (406)
                      +||+|....|+. +.|+..+. ....+..     ......++|++|.+++-=+
T Consensus       206 ~~v~Vt~~~P~~-~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  206 YGVHVTLYYPPD-TLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             cceEEEEEcCCC-CCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHH
Confidence            999999999985 44532221 1111100     1112357999999886543

>KOG1204|consensus

Probab=99.94  E-value=3.1e-26  Score=201.96  Aligned_cols=228  Identities=22%  Similarity=0.245  Sum_probs=182.5

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEE--ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIA--AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~--~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..+|++++||+|+|||..++..+.+++......  .|.....+.+          ....+........|++...-..+++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L----------~v~~gd~~v~~~g~~~e~~~l~al~   73 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGL----------KVAYGDDFVHVVGDITEEQLLGALR   73 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccce----------EEEecCCcceechHHHHHHHHHHHH
Confidence            457899999999999999999999888654444  4433332211          1223445556667888899999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++|..|++|||||...+....+                                                     
T Consensus        74 e~~r~k~gkr~iiI~NAG~lgdvsk~~-----------------------------------------------------  100 (253)
T KOG1204|consen   74 EAPRKKGGKRDIIIHNAGSLGDVSKGA-----------------------------------------------------  100 (253)
T ss_pred             hhhhhcCCceeEEEecCCCccchhhcc-----------------------------------------------------
Confidence            999999999999999999876543321                                                     


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         .+..+.++|++.++.|+++.+.+.+.++|.++++. .+.|||+||.++..|  +++|+.|+++|+|+++|.+.||.|
T Consensus       101 ---~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p--~~~wa~yc~~KaAr~m~f~~lA~E  175 (253)
T KOG1204|consen  101 ---VDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRP--FSSWAAYCSSKAARNMYFMVLASE  175 (253)
T ss_pred             ---CCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcc--ccHHHHhhhhHHHHHHHHHHHhhc
Confidence               02677889999999999999999999999999984 689999999999988  689999999999999999999998


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC-cc-----------cccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS-AD-----------AKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-~~-----------~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      -. .+|+|.+++|| +++|.|........ ..           ...+..+|...|..+..|+.... +++|+++
T Consensus       176 Ep-~~v~vl~~aPG-vvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~sG~~v  246 (253)
T KOG1204|consen  176 EP-FDVRVLNYAPG-VVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FVSGQHV  246 (253)
T ss_pred             Cc-cceeEEEccCC-cccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-ccccccc
Confidence            54 79999999999 68998876654433 11           12456789999999999986543 8999987

>KOG4170|consensus

Probab=99.93  E-value=1.5e-26  Score=182.39  Aligned_cols=85  Identities=51%  Similarity=0.878  Sum_probs=76.4

Q ss_pred             ccccCCCCCCc--ceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHH
Q psy6113         321 YSYVPNGAAEG--SWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKL  398 (406)
Q Consensus       321 ~~~~~~~~~~g--~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~  398 (406)
                      |++...+++.+  .|++|+|+|+|.++.|. ..++|||+||+++||.+|++||+|||+|||+|||||+|||.+||||+++
T Consensus        27 fqfni~~~~~~~~~w~lDlK~g~g~~~~g~-~~~~Dv~~ti~d~dF~~l~tgKl~Pq~Afm~GKlKIkG~~~~AmKL~~l  105 (113)
T KOG4170|consen   27 FQFNITDADGGQETWTLDLKNGSGSVGPGS-SGKVDVTFTIADEDFVKLLTGKLNPQTAFMQGKLKIKGNMALAMKLEPL  105 (113)
T ss_pred             EEEEEecCCCCeEEEEEEccCCccccccCC-CCCccEEEEecHHHHHHHHhCCCChHHHHHcCCeeecCCHHHHHHHHHH
Confidence            33334333344  99999999999999987 7899999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCC
Q psy6113         399 MGALKSKL  406 (406)
Q Consensus       399 ~~~~~~~~  406 (406)
                      ++.++|||
T Consensus       106 ~~~~~akL  113 (113)
T KOG4170|consen  106 LRALNAKL  113 (113)
T ss_pred             HhhhhccC
Confidence            99899997

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.2e-25  Score=202.37  Aligned_cols=215  Identities=17%  Similarity=0.185  Sum_probs=167.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|++++|+.+..           +++...+  +.++.+|+++.++++++++++..
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~-----------~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL-----------AALQALG--AEALALDVADPASVAGLAWKLDG   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH-----------HHHHhcc--ceEEEecCCCHHHHHHHHHHhcC
Confidence            6899999999999999999999999999999986542           2222222  45789999999999998877632


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                        +++|++|||+|.......                                                         ++.
T Consensus        69 --~~~d~vi~~ag~~~~~~~---------------------------------------------------------~~~   89 (222)
T PRK06953         69 --EALDAAVYVAGVYGPRTE---------------------------------------------------------GVE   89 (222)
T ss_pred             --CCCCEEEECCCcccCCCC---------------------------------------------------------Ccc
Confidence              479999999997632210                                                         112


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc-cCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW-FKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~-~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      +.+.++|+..+++|+.+++.++++++|+|.+. .++++++||..+..+.. ......|+++|++++++++.++.++.  +
T Consensus        90 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~  166 (222)
T PRK06953         90 PITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQAR--H  166 (222)
T ss_pred             cCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhcc--C
Confidence            67899999999999999999999999998664 58999999987765421 11223699999999999999999864  7


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++||+|+||+ ++|++.+         ......+++.+..++.++.......+|.++ ++++
T Consensus       167 i~v~~v~Pg~-i~t~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (222)
T PRK06953        167 ATCIALHPGW-VRTDMGG---------AQAALDPAQSVAGMRRVIAQATRRDNGRFFQYDGV  218 (222)
T ss_pred             cEEEEECCCe-eecCCCC---------CCCCCCHHHHHHHHHHHHHhcCcccCceEEeeCCc
Confidence            9999999996 5664321         122357899999999987666677888888 6654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-24  Score=198.29  Aligned_cols=208  Identities=26%  Similarity=0.367  Sum_probs=164.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|+++||||+++||+++++.|+++ ++|++++|+.+..           +++......+.++.+|++|+++++++++.  
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~-----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   68 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERL-----------DELAAELPGATPFPVDLTDPEAIAAAVEQ--   68 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHH-----------HHHHHHhccceEEecCCCCHHHHHHHHHh--
Confidence            579999999999999999999999 9999999986431           11221123477889999999998887764  


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                        ++++|++||+||.......                                                           
T Consensus        69 --~~~id~vi~~ag~~~~~~~-----------------------------------------------------------   87 (227)
T PRK08219         69 --LGRLDVLVHNAGVADLGPV-----------------------------------------------------------   87 (227)
T ss_pred             --cCCCCEEEECCCcCCCCCc-----------------------------------------------------------
Confidence              3589999999997543322                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.++|.+++++|+.+++.+++.+++.|+++. +++|++||..+..+  .++...|+++|++++.+++.++.++... 
T Consensus        88 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~--~~~~~~y~~~K~a~~~~~~~~~~~~~~~-  163 (227)
T PRK08219         88 AESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRA--NPGWGSYAASKFALRALADALREEEPGN-  163 (227)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCc--CCCCchHHHHHHHHHHHHHHHHHHhcCC-
Confidence            2677889999999999999999999999998764 79999999988765  3678899999999999999999998766 


Q ss_pred             eEEEEecchhhhhHHHHHHhcCC--CcccccccCChhhHHHHHHHhhcCC
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGG--SADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~--~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      |++++|+||+ +.+++.......  ...+..++.+|+|+|+.++++++..
T Consensus       164 i~~~~i~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        164 VRVTSVHPGR-TDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             ceEEEEecCC-ccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence            9999999996 444433322211  1112345689999999999999753

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.92  E-value=7.1e-24  Score=209.77  Aligned_cols=198  Identities=16%  Similarity=0.164  Sum_probs=148.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..++||+++||||++|||++++++|+++|++|++++|+.+++          ..........+..+.+|++|++++.+. 
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l----------~~~~~~~~~~v~~v~~Dvsd~~~v~~~-  242 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKI----------TLEINGEDLPVKTLHWQVGQEAALAEL-  242 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHhhcCCCeEEEEeeCCCHHHHHHH-
Confidence            467899999999999999999999999999999999876532          112222233466788999999886543 


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                            ++++|++|||||+...   .                                                      
T Consensus       243 ------l~~IDiLInnAGi~~~---~------------------------------------------------------  259 (406)
T PRK07424        243 ------LEKVDILIINHGINVH---G------------------------------------------------------  259 (406)
T ss_pred             ------hCCCCEEEECCCcCCC---C------------------------------------------------------
Confidence                  4689999999997431   1                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC----CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH----AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~----g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                           +.+.+++++++++|+.|++.++++++|.|++++.    +.+|++|| +...+   +..+.|++||+|+.+++. +
T Consensus       260 -----~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~---~~~~~Y~ASKaAl~~l~~-l  329 (406)
T PRK07424        260 -----ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP---AFSPLYELSKRALGDLVT-L  329 (406)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC---CCchHHHHHHHHHHHHHH-H
Confidence                 5678899999999999999999999999987642    45677765 33322   345689999999999985 4


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCC
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPS  299 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~  299 (406)
                      .++.  .++.+..++||. ..|.+         .+ ....+||++|+.++++++....+
T Consensus       330 ~~~~--~~~~I~~i~~gp-~~t~~---------~~-~~~~spe~vA~~il~~i~~~~~~  375 (406)
T PRK07424        330 RRLD--APCVVRKLILGP-FKSNL---------NP-IGVMSADWVAKQILKLAKRDFRN  375 (406)
T ss_pred             HHhC--CCCceEEEEeCC-CcCCC---------Cc-CCCCCHHHHHHHHHHHHHCCCCE
Confidence            4443  356667777884 44422         01 13478999999999999765543

>KOG1478|consensus

Probab=99.91  E-value=8.2e-24  Score=188.74  Aligned_cols=216  Identities=15%  Similarity=0.198  Sum_probs=170.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-----eEEEEecCCCCCCCCcccHHHHHHHHHHcC----CeeeeeeecCCChHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA-----NIVIAAKTAEPHPKLPGTIYSAAKEVEDAG----GNCLPCIVDIRDEHA   79 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga-----~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g----~~~~~~~~Dl~~~~~   79 (406)
                      .|+++|||+++|||+++|.+|.+...     +|++++|+.++.+       +++..+.+..    .++.++.+|+++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae-------~vc~~lk~f~p~~~i~~~yvlvD~sNm~S   75 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAE-------AVCAALKAFHPKSTIEVTYVLVDVSNMQS   75 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHH-------HHHHHHHHhCCCceeEEEEEEEehhhHHH
Confidence            59999999999999999999998765     4788899988754       4555555543    378899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcC-CcceEec
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFG-GIDILVN  158 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~id~li~  158 (406)
                      +.++...+.++|.++|.++.|||++......              +.+.+                 .+-|. .+-.+.+
T Consensus        76 v~~A~~di~~rf~~ld~iylNAg~~~~~gi~--------------w~~av-----------------f~~fsnpv~amt~  124 (341)
T KOG1478|consen   76 VFRASKDIKQRFQRLDYIYLNAGIMPNPGIN--------------WKAAV-----------------FGLFSNPVIAMTS  124 (341)
T ss_pred             HHHHHHHHHHHhhhccEEEEccccCCCCccc--------------HHHHH-----------------HHHhhchhHHhcC
Confidence            9999999999999999999999998766543              11111                 11111 1111222


Q ss_pred             cc-cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc-------cCCchhhhHhh
Q psy6113         159 NA-SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW-------FKNHVAYTISK  230 (406)
Q Consensus       159 ~a-g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~-------~~~~~~Y~asK  230 (406)
                      .+ |+..++   ..+.+++..+|++|++|+|++.+.+.|++..+....+|++||..+...+.       ..+..+|..||
T Consensus       125 pt~~~~t~G---~is~D~lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSK  201 (341)
T KOG1478|consen  125 PTEGLLTQG---KISADGLGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSK  201 (341)
T ss_pred             chhhhhhcc---eecccchhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhH
Confidence            21 222222   67889999999999999999999999999999888999999998876542       24677999999


Q ss_pred             HHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHH
Q psy6113         231 YGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIE  266 (406)
Q Consensus       231 aal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~  266 (406)
                      .+++.+.-++.+.+.+.|+..++++||. .+|.+..
T Consensus       202 rl~DlLh~A~~~~~~~~g~~qyvv~pg~-~tt~~~~  236 (341)
T KOG1478|consen  202 RLTDLLHVALNRNFKPLGINQYVVQPGI-FTTNSFS  236 (341)
T ss_pred             HHHHHHHHHHhccccccchhhhcccCce-eecchhh
Confidence            9999999999999999999999999995 4554433

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.89  E-value=2e-22  Score=233.54  Aligned_cols=188  Identities=14%  Similarity=0.129  Sum_probs=155.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCC--------------C--------------------C----
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPH--------------P--------------------K----   48 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~--------------~--------------------~----   48 (406)
                      +|+++|||||++|||+++|++|+++ |++|++++|+....              +                    +    
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999983100              0                    0    


Q ss_pred             C--cccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccc
Q psy6113          49 L--PGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR  126 (406)
Q Consensus        49 ~--~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~  126 (406)
                      +  ...+.+..+.+.+.|.++.++.||++|.++++++++++.+. ++||+||||||+.....+                 
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i----------------- 2137 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHI----------------- 2137 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCc-----------------
Confidence            0  01223334456667889999999999999999999999877 689999999998755433                 


Q ss_pred             cceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeE
Q psy6113         127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHI  206 (406)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~I  206 (406)
                                                                .+.+.++|++++++|+.|++++++++.+.+.    ++|
T Consensus      2138 ------------------------------------------~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~----~~I 2171 (2582)
T TIGR02813      2138 ------------------------------------------QDKTLEEFNAVYGTKVDGLLSLLAALNAENI----KLL 2171 (2582)
T ss_pred             ------------------------------------------ccCCHHHHHHHHHHHHHHHHHHHHHHHHhCC----CeE
Confidence                                                      3889999999999999999999998866543    579


Q ss_pred             EEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHH
Q psy6113         207 LNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAA  264 (406)
Q Consensus       207 v~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~  264 (406)
                      |++||..++.+.  ++++.|+++|++++.+++.++.++.  ++|||+|+||+ .++.|
T Consensus      2172 V~~SSvag~~G~--~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~-wdtgm 2224 (2582)
T TIGR02813      2172 ALFSSAAGFYGN--TGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGP-WDGGM 2224 (2582)
T ss_pred             EEEechhhcCCC--CCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCe-ecCCc
Confidence            999999999874  7899999999999999999999974  49999999995 55544

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=1.3e-21  Score=171.61  Aligned_cols=176  Identities=16%  Similarity=0.178  Sum_probs=145.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||++|||++++++|+++|+ .|++.+|+.+..+.    ......+++..+.++.++.+|++++++++++++++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPG----AAELLAELEALGAEVTVVACDVADRAALAAALAAIP   76 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCcc----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999997 68888887655332    111234555567788899999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      ..++++|++|||||.......                                                           
T Consensus        77 ~~~~~id~li~~ag~~~~~~~-----------------------------------------------------------   97 (180)
T smart00822       77 ARLGPLRGVIHAAGVLDDGLL-----------------------------------------------------------   97 (180)
T ss_pred             HHcCCeeEEEEccccCCcccc-----------------------------------------------------------
Confidence            999999999999997643322                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.++|+.++++|+.+++.+.+.+.    +.+.++||++||..+..+  .+++..|+++|+++..+++.++    +.|
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~~~~--~~~~~~y~~sk~~~~~~~~~~~----~~~  167 (180)
T smart00822       98 ANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAGVLG--NPGQANYAAANAFLDALAAHRR----ARG  167 (180)
T ss_pred             ccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHHhcC--CCCchhhHHHHHHHHHHHHHHH----hcC
Confidence            277888999999999999999999883    345689999999988776  3678899999999999887764    458


Q ss_pred             eEEEEecchh
Q psy6113         249 IAVNALWPRT  258 (406)
Q Consensus       249 I~vn~v~PG~  258 (406)
                      +++.++.||+
T Consensus       168 ~~~~~~~~g~  177 (180)
T smart00822      168 LPATSINWGA  177 (180)
T ss_pred             CceEEEeecc
Confidence            8899999995

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=2.4e-20  Score=189.16  Aligned_cols=205  Identities=11%  Similarity=0.069  Sum_probs=149.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-----cC----CeeeeeeecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-----AG----GNCLPCIVDIR   75 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-----~g----~~~~~~~~Dl~   75 (406)
                      ...+||+++||||+||||++++++|+++|++|++++|+.+++.       ....++..     .+    .++.++.+|++
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~-------~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt  148 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAE-------SLVQSVKQMKLDVEGTQPVEKLEIVECDLE  148 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHH-------HHHHHhhhhccccccccccCceEEEEecCC
Confidence            4568999999999999999999999999999999999876532       22222221     12    35788999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcce
Q psy6113          76 DEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDI  155 (406)
Q Consensus        76 ~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~  155 (406)
                      +.+++++       .++++|+||||+|....                                                 
T Consensus       149 D~esI~~-------aLggiDiVVn~AG~~~~-------------------------------------------------  172 (576)
T PLN03209        149 KPDQIGP-------ALGNASVVICCIGASEK-------------------------------------------------  172 (576)
T ss_pred             CHHHHHH-------HhcCCCEEEEccccccc-------------------------------------------------
Confidence            9988754       35689999999986421                                                 


Q ss_pred             EeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHH
Q psy6113         156 LVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       156 li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~  235 (406)
                                      ...+|...+++|+.+..++++++.    +.+.++||++||..+.... .+. ..|. +|+++..
T Consensus       173 ----------------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g-~p~-~~~~-sk~~~~~  229 (576)
T PLN03209        173 ----------------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVG-FPA-AILN-LFWGVLC  229 (576)
T ss_pred             ----------------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccC-ccc-cchh-hHHHHHH
Confidence                            112366778899999999988874    3456899999998764211 122 2354 8899999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHHh-----c-CCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEML-----T-GGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~-----~-~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +.+.+..+++..||++|.|+||++ .+.+.+..     . .....+..+..+++|||+.++||+++.
T Consensus       230 ~KraaE~~L~~sGIrvTIVRPG~L-~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~  295 (576)
T PLN03209        230 WKRKAEEALIASGLPYTIVRPGGM-ERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNR  295 (576)
T ss_pred             HHHHHHHHHHHcCCCEEEEECCee-cCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCc
Confidence            999999999999999999999974 33321110     0 001123345678999999999999854

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.84  E-value=1.1e-19  Score=175.74  Aligned_cols=255  Identities=14%  Similarity=0.061  Sum_probs=163.8

Q ss_pred             CCcEEEEecCCchHHHH--HHHHHHHcCCeEEEEecCCCCCCCC-----cccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           8 SGLTIFITGASRGIGKA--IALKAAKDGANIVIAAKTAEPHPKL-----PGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         8 ~gk~alVTGas~GIG~a--ia~~La~~Ga~Vvl~~r~~~~~~~~-----~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      .+|++||||+++|||++  +|++| ++|++|+++++..++...-     ....+...+.+...|..+..+.||+++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            47999999999999999  89999 9999999888644321110     0011223444555677788899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcC-C-cceEec
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFG-G-IDILVN  158 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-id~li~  158 (406)
                      +++++++.+.+|+||+||||+|......+..  -+             .         .+..+..+-+.+. + +|   .
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~--g~-------------~---------~~s~lKpi~~~~~~~~~d---~  171 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKT--GE-------------V---------YRSVLKPIGEPYTGKTLD---T  171 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCccc--Cc-------------e---------eecccccccccccCCccc---c
Confidence            9999999999999999999999875433210  00             0         0011111111110 0 11   0


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhh-H--HHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCc--hhhhHhhHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINAR-G--TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGM  233 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~-g--~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal  233 (406)
                      +-..+...++...+.++++.++.+.-. .  .|.-.....+.|.+  ++++|..|+..+...  +|.+  ..-+.+|++|
T Consensus       172 ~~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla~--g~~~va~TY~G~~~t--~p~Y~~g~mG~AKa~L  247 (398)
T PRK13656        172 DKDVIIEVTVEPATEEEIADTVKVMGGEDWELWIDALDEAGVLAE--GAKTVAYSYIGPELT--HPIYWDGTIGKAKKDL  247 (398)
T ss_pred             cccceeEEEEeeCCHHHHHHHHHhhccchHHHHHHHHHhcccccC--CcEEEEEecCCccee--ecccCCchHHHHHHHH
Confidence            001222334445666666665554432 1  12334445566643  489999999887765  3443  4678999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCc------ccccccCChhhHHHHHHHhhcC
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSA------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +.-+|.|+.+|++.|||+|++.+|. +.|.....++.-+.      ..++..++-|.+-+-+..|.++
T Consensus       248 E~~~r~La~~L~~~giran~i~~g~-~~T~Ass~Ip~~~ly~~~l~kvmk~~g~he~~ieq~~rl~~~  314 (398)
T PRK13656        248 DRTALALNEKLAAKGGDAYVSVLKA-VVTQASSAIPVMPLYISLLFKVMKEKGTHEGCIEQIYRLFSE  314 (398)
T ss_pred             HHHHHHHHHHhhhcCCEEEEEecCc-ccchhhhcCCCcHHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Confidence            9999999999999999999999994 66655554433210      1122334556666666666653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.84  E-value=2e-19  Score=174.81  Aligned_cols=201  Identities=15%  Similarity=0.118  Sum_probs=146.9

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+||+++||||+|+||++++++|+++|  ++|++.+|+.....       .....+  ...++.++.+|++|.+++.+++
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~-------~~~~~~--~~~~~~~v~~Dl~d~~~l~~~~   72 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQW-------EMQQKF--PAPCLRFFIGDVRDKERLTRAL   72 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHH-------HHHHHh--CCCcEEEEEccCCCHHHHHHHH
Confidence            468999999999999999999999987  68999888754311       111111  1246888999999999988766


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       ++|++||+||.... +..                                                      
T Consensus        73 ~-------~iD~Vih~Ag~~~~-~~~------------------------------------------------------   90 (324)
T TIGR03589        73 R-------GVDYVVHAAALKQV-PAA------------------------------------------------------   90 (324)
T ss_pred             h-------cCCEEEECcccCCC-chh------------------------------------------------------
Confidence            4       58999999996421 100                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+   ...++++|+.+++++++++.+    .+.++||++||.....|     ...|++||++.+.+++.++.++
T Consensus        91 -----~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p-----~~~Y~~sK~~~E~l~~~~~~~~  153 (324)
T TIGR03589        91 -----EYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP-----INLYGATKLASDKLFVAANNIS  153 (324)
T ss_pred             -----hcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHhhc
Confidence                 122   245899999999999999864    34579999999765433     4579999999999999999888


Q ss_pred             cCCCeEEEEecchhhhh------HHHHHHhcCCC-c------ccccccCChhhHHHHHHHhhcC
Q psy6113         245 KGDNIAVNALWPRTAIY------TAAIEMLTGGS-A------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~------t~~~~~~~~~~-~------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +++|++++++.||.+..      +.+.+...... .      .....+..++|++++++.++..
T Consensus       154 ~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       154 GSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             cccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence            88999999999996432      22222221111 0      1112356899999999888754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.81  E-value=4.7e-19  Score=157.79  Aligned_cols=174  Identities=20%  Similarity=0.254  Sum_probs=134.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++|||||.+|||+.+++.|+++|+ +|++++|+.....+    ..+..+++++.+.++.++.||++|+++++++++++.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~----~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAE----AEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTT----HHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHH----HHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHh
Confidence            689999999999999999999986 89999999422221    3456778888899999999999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .+++|+.+||+||........                                                           
T Consensus        78 ~~~~i~gVih~ag~~~~~~~~-----------------------------------------------------------   98 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLADAPIQ-----------------------------------------------------------   98 (181)
T ss_dssp             TSS-EEEEEE-------B-GC-----------------------------------------------------------
T ss_pred             ccCCcceeeeeeeeecccccc-----------------------------------------------------------
Confidence            999999999999987654433                                                           


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++++.++...+.|..++.+.+.+    ..-..+|.+||.++..+.  ++++.|+++.+.++.|++.....    |.
T Consensus        99 ~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~--~gq~~YaaAN~~lda~a~~~~~~----g~  168 (181)
T PF08659_consen   99 DQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGG--PGQSAYAAANAFLDALARQRRSR----GL  168 (181)
T ss_dssp             C--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT---TTBHHHHHHHHHHHHHHHHHHHT----TS
T ss_pred             cCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccC--cchHhHHHHHHHHHHHHHHHHhC----CC
Confidence            889999999999999999999888744    445789999999998774  89999999999999998876553    56


Q ss_pred             EEEEecch
Q psy6113         250 AVNALWPR  257 (406)
Q Consensus       250 ~vn~v~PG  257 (406)
                      ++.+|.-|
T Consensus       169 ~~~sI~wg  176 (181)
T PF08659_consen  169 PAVSINWG  176 (181)
T ss_dssp             EEEEEEE-
T ss_pred             CEEEEEcc
Confidence            67777655

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.81  E-value=7.9e-19  Score=154.18  Aligned_cols=143  Identities=20%  Similarity=0.289  Sum_probs=116.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||+++|+.|+++|++|++++|+.+.       +....+++...+.+..++.+|+++.+++++++
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v   84 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES-------GQATVEEITNLGGEALFVSYDMEKQGDWQRVI   84 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            56889999999999999999999999999999999988653       23445566666777888999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.||++|++|||||+....+..                                                      
T Consensus        85 ~~~~~~~G~iDilVnnAG~~~~~~~~------------------------------------------------------  110 (169)
T PRK06720         85 SITLNAFSRIDMLFQNAGLYKIDSIF------------------------------------------------------  110 (169)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcc------------------------------------------------------
Confidence            99999999999999999987644332                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-------CCeEEEeCCCCCC
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-------HAHILNISPPLNL  215 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-------~g~Iv~vsS~~~~  215 (406)
                          .+.+.+++.   .+|+.+++++++.+.++|.+++       .||+..|||.+..
T Consensus       111 ----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720        111 ----SRQQENDSN---VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             ----cccchhHhh---ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence                133444433   6788888999999999988764       4788888886554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.78  E-value=9.3e-18  Score=164.81  Aligned_cols=209  Identities=14%  Similarity=0.120  Sum_probs=147.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ++||+++||||+|+||.+++++|+++|++|++++|+......       ....+. .+.++.++.+|+++.+++.++++.
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPN-------LFELLN-LAKKIEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchh-------HHHHHh-hcCCceEEEccCCCHHHHHHHHhh
Confidence            468999999999999999999999999999999988654221       111121 234577889999999999888875


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .     ++|++||+||....                                                            
T Consensus        74 ~-----~~d~vih~A~~~~~------------------------------------------------------------   88 (349)
T TIGR02622        74 F-----KPEIVFHLAAQPLV------------------------------------------------------------   88 (349)
T ss_pred             c-----CCCEEEECCccccc------------------------------------------------------------
Confidence            4     58999999995321                                                            


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC------C----ccCCchhhhHhhHHHHHH
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP------F----WFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~------~----~~~~~~~Y~asKaal~~l  236 (406)
                         ..+.+++...+++|+.+++.+++++.+.   +..++||++||...+..      .    +..+...|++||.+.+.+
T Consensus        89 ---~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  162 (349)
T TIGR02622        89 ---RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV  162 (349)
T ss_pred             ---ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence               2334556778899999999999987421   22469999999643321      0    123456899999999999


Q ss_pred             HHHHHHhhcC----CCeEEEEecchhhhhH----------HHHHHhcCCCc------ccccccCChhhHHHHHHHhhc
Q psy6113         237 ALGMAEEFKG----DNIAVNALWPRTAIYT----------AAIEMLTGGSA------DAKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       237 ~~~la~e~~~----~gI~vn~v~PG~~~~t----------~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s  294 (406)
                      ++.++.++.+    +|++++++.|+.+...          .+.........      .....+...+|++++++.++.
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       163 IASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             HHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHH
Confidence            9999988755    4899999999853321          11111111111      011223467899998887764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.76  E-value=2.7e-17  Score=159.76  Aligned_cols=217  Identities=18%  Similarity=0.164  Sum_probs=148.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH--cCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--AGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~--~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+|+++||||+|+||++++++|+++|++|++++|+.+....       .......  ...++.++.+|+++.++++++++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKK-------TDHLLALDGAKERLKLFKADLLDEGSFELAID   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhh-------HHHHHhccCCCCceEEEeCCCCCchHHHHHHc
Confidence            47999999999999999999999999999999888764321       1111111  12468889999999998887765


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                             ++|++|||||....                                                           
T Consensus        77 -------~~d~vih~A~~~~~-----------------------------------------------------------   90 (325)
T PLN02989         77 -------GCETVFHTASPVAI-----------------------------------------------------------   90 (325)
T ss_pred             -------CCCEEEEeCCCCCC-----------------------------------------------------------
Confidence                   58999999995421                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc------------cC--------Cchh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW------------FK--------NHVA  225 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~------------~~--------~~~~  225 (406)
                          ..+.+++...+++|+.+++++++++.+.+   +.++||++||..+..+..            .+        ....
T Consensus        91 ----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         91 ----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence                22334577899999999999999997754   246999999986543210            00        1246


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH-----------HHHHhcCCCc--ccccccCChhhHHHHHHHh
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA-----------AIEMLTGGSA--DAKATSRKPEIMADAAYYI  292 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~-----------~~~~~~~~~~--~~~~~~~~pe~vA~~v~~L  292 (406)
                      |+.||.+.+.+++.+++++   |+.++.+.|+.+..+.           +.........  .....+...+|+|++++.+
T Consensus       164 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~  240 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKA  240 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHH
Confidence            9999999999998887654   7888888887432211           1111111110  0012345689999999888


Q ss_pred             hcCCCCCccceEEEehh
Q psy6113         293 LSSNPPSLTGQFLIDDE  309 (406)
Q Consensus       293 ~s~~~~~~tG~~i~d~g  309 (406)
                      +....  ..|.+.+.++
T Consensus       241 l~~~~--~~~~~ni~~~  255 (325)
T PLN02989        241 LETPS--ANGRYIIDGP  255 (325)
T ss_pred             hcCcc--cCceEEEecC
Confidence            75422  2455556443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=8.9e-17  Score=157.23  Aligned_cols=221  Identities=12%  Similarity=0.092  Sum_probs=148.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+.++|+++||||+|+||++++++|+++|++|++++|+.+....  ..++.........+.++.++.+|++|.+++.+++
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   79 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNT--QRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWL   79 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccc--cchhhhccccccccCceEEEEecCCCHHHHHHHH
Confidence            46789999999999999999999999999999999987643211  0011111111112346888999999999999888


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+     ++|+|||+||....                                                          
T Consensus        80 ~~~-----~~d~Vih~A~~~~~----------------------------------------------------------   96 (340)
T PLN02653         80 DDI-----KPDEVYNLAAQSHV----------------------------------------------------------   96 (340)
T ss_pred             HHc-----CCCEEEECCcccch----------------------------------------------------------
Confidence            864     58999999997432                                                          


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCC--------ccCCchhhhHhhHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPF--------WFKNHVAYTISKYGMSM  235 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~--------~~~~~~~Y~asKaal~~  235 (406)
                           ....++....+++|+.++.++++++.+...+++ ..++|++||...+...        +..+...|+.||.+.+.
T Consensus        97 -----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~  171 (340)
T PLN02653         97 -----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHW  171 (340)
T ss_pred             -----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence                 112233466778999999999999988776431 1278889885322211        01235689999999999


Q ss_pred             HHHHHHHhhcC---CCeEEEEecchhhh---hHHH---HHHh-cCCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         236 CALGMAEEFKG---DNIAVNALWPRTAI---YTAA---IEML-TGGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       236 l~~~la~e~~~---~gI~vn~v~PG~~~---~t~~---~~~~-~~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +++.++.+++-   .++.+|.+.|+...   ...+   .... .....       .....+...+|+|++++.++..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~  248 (340)
T PLN02653        172 YTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQ  248 (340)
T ss_pred             HHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhc
Confidence            99999888642   34556767775211   1111   1111 11110       1123456799999999998864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.71  E-value=4.6e-16  Score=149.46  Aligned_cols=217  Identities=14%  Similarity=0.104  Sum_probs=144.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.....     .......+...+.++.++.+|++|.+++.+++.  
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~--   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETE-----IEKEIRGLSCEEERLKVFDVDPLDYHSILDALK--   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhh-----HHHHHHhcccCCCceEEEEecCCCHHHHHHHHc--
Confidence            5789999999999999999999999999999998643211     111112222224468889999999988765443  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ..|.++|.++...                                                              
T Consensus        78 -----~~d~v~~~~~~~~--------------------------------------------------------------   90 (297)
T PLN02583         78 -----GCSGLFCCFDPPS--------------------------------------------------------------   90 (297)
T ss_pred             -----CCCEEEEeCccCC--------------------------------------------------------------
Confidence                 4677777554211                                                              


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---c-----cC-----C-------chhhh
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---W-----FK-----N-------HVAYT  227 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---~-----~~-----~-------~~~Y~  227 (406)
                        +.+ .+++.++++|+.|++++++++.+.+   +.++||++||.++....   .     ..     .       ...|+
T Consensus        91 --~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         91 --DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             --ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence              111 2467899999999999999997754   23699999998654211   0     00     0       11699


Q ss_pred             HhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHH---HHhcCCC---cccccccCChhhHHHHHHHhhcCCCCCcc
Q psy6113         228 ISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAI---EMLTGGS---ADAKATSRKPEIMADAAYYILSSNPPSLT  301 (406)
Q Consensus       228 asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~---~~~~~~~---~~~~~~~~~pe~vA~~v~~L~s~~~~~~t  301 (406)
                      .||...+.+++.++++   +|+++++|+|+++......   ..+....   ......+...+|+|++.+..+...  ...
T Consensus       165 ~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~--~~~  239 (297)
T PLN02583        165 LAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDV--SSY  239 (297)
T ss_pred             HHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCc--ccC
Confidence            9999988888877655   3899999999964332111   0111110   011123567899999998888632  345


Q ss_pred             ceEEEehh
Q psy6113         302 GQFLIDDE  309 (406)
Q Consensus       302 G~~i~d~g  309 (406)
                      |.+++.++
T Consensus       240 ~r~~~~~~  247 (297)
T PLN02583        240 GRYLCFNH  247 (297)
T ss_pred             CcEEEecC
Confidence            67765544

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.69  E-value=1.6e-15  Score=147.28  Aligned_cols=217  Identities=18%  Similarity=0.140  Sum_probs=145.6

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH--HcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE--DAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~--~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..||+++||||+|.||.+++++|+++|++|+++.|+.+..+.       ......  ....++.++.+|+++.+++.+++
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKK-------TEHLLALDGAKERLKLFKADLLEESSFEQAI   75 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHH-------HHHHHhccCCCCceEEEecCCCCcchHHHHH
Confidence            468999999999999999999999999999988887764321       111111  11246788999999999887776


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       ++|++||+|+.....                                                         
T Consensus        76 ~-------~~d~vih~A~~~~~~---------------------------------------------------------   91 (322)
T PLN02986         76 E-------GCDAVFHTASPVFFT---------------------------------------------------------   91 (322)
T ss_pred             h-------CCCEEEEeCCCcCCC---------------------------------------------------------
Confidence            5       489999999963210                                                         


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCC-CCc-c-------------C-----Cch
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLN-PFW-F-------------K-----NHV  224 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~-~~~-~-------------~-----~~~  224 (406)
                           .  .+.+...+++|+.++.++++++...   .+-++||++||.+... +.. .             +     ...
T Consensus        92 -----~--~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         92 -----V--KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             -----C--CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence                 0  1123457899999999999887432   1336999999986531 110 0             0     135


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH----------HHH-HhcCCCc--ccccccCChhhHHHHHHH
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA----------AIE-MLTGGSA--DAKATSRKPEIMADAAYY  291 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~----------~~~-~~~~~~~--~~~~~~~~pe~vA~~v~~  291 (406)
                      .|+.||.+.+.+++.+.+++   |+.++++.|+.+..+.          ... .......  .....+...+|+|++++.
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~  238 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIK  238 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHH
Confidence            69999999888888876654   7999999998543221          011 1111110  111235689999999998


Q ss_pred             hhcCCCCCccceEEEehh
Q psy6113         292 ILSSNPPSLTGQFLIDDE  309 (406)
Q Consensus       292 L~s~~~~~~tG~~i~d~g  309 (406)
                      ++....  ..|.+.+.++
T Consensus       239 al~~~~--~~~~yni~~~  254 (322)
T PLN02986        239 ALETPS--ANGRYIIDGP  254 (322)
T ss_pred             HhcCcc--cCCcEEEecC
Confidence            886432  2455555443

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.68  E-value=2.9e-15  Score=146.37  Aligned_cols=209  Identities=15%  Similarity=0.156  Sum_probs=141.9

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHA   79 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~   79 (406)
                      .-...+++++++||||+|.||+.++++|+++|++|+++.|+......       . ..+...  .+++.++.+|++|.++
T Consensus         2 ~~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~-~~~~~~~~~~~~~~~~~Dl~d~~~   73 (338)
T PLN00198          2 ATLTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKK-------I-AHLRALQELGDLKIFGADLTDEES   73 (338)
T ss_pred             CcccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHH-------H-HHHHhcCCCCceEEEEcCCCChHH
Confidence            34456789999999999999999999999999999988888653211       1 111111  1357888999999988


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      +.++++       ++|++||+|+....                                                     
T Consensus        74 ~~~~~~-------~~d~vih~A~~~~~-----------------------------------------------------   93 (338)
T PLN00198         74 FEAPIA-------GCDLVFHVATPVNF-----------------------------------------------------   93 (338)
T ss_pred             HHHHHh-------cCCEEEEeCCCCcc-----------------------------------------------------
Confidence            777654       57999999984210                                                     


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------------------
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------------------  218 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------------------  218 (406)
                                 ...+.+...+++|+.++.++++++.+.   .+.++||++||.+.+...                     
T Consensus        94 -----------~~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~  159 (338)
T PLN00198         94 -----------ASEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLT  159 (338)
T ss_pred             -----------CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceeccccCCchhhhh
Confidence                       111224557889999999999988543   234699999997654311                     


Q ss_pred             -ccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH-----------HHHHhcCCCc-------cc----
Q psy6113         219 -WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA-----------AIEMLTGGSA-------DA----  275 (406)
Q Consensus       219 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~-----------~~~~~~~~~~-------~~----  275 (406)
                       ..++...|+.||.+.+.+++.++.+   +|+++..+.|+.+....           ..........       .+    
T Consensus       160 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  236 (338)
T PLN00198        160 SEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSG  236 (338)
T ss_pred             hcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccC
Confidence             0123456999999999999888776   37888888886432211           0111111100       00    


Q ss_pred             ccccCChhhHHHHHHHhhcC
Q psy6113         276 KATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       276 ~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ...+...+|++++++.++..
T Consensus       237 ~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        237 SISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             CcceeEHHHHHHHHHHHhhC
Confidence            12456789999999888764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.65  E-value=1e-14  Score=142.94  Aligned_cols=215  Identities=13%  Similarity=0.096  Sum_probs=138.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||+|+||.+++++|+++|++|++++|+.+....  +.+....... ...+.++.++.+|++|.+++.++++.. 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNT--QRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccch--hhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-
Confidence            689999999999999999999999999999998653110  0011111111 111345788999999999998888764 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++||+|+......                                                            
T Consensus        78 ----~~d~ViH~Aa~~~~~~------------------------------------------------------------   93 (343)
T TIGR01472        78 ----KPTEIYNLAAQSHVKV------------------------------------------------------------   93 (343)
T ss_pred             ----CCCEEEECCcccccch------------------------------------------------------------
Confidence                5899999999753211                                                            


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~  239 (406)
                         ..+.-...+++|+.|+.++++++.+.-.+ +..++|++||...+...         +..+...|+.||.+.+.+++.
T Consensus        94 ---~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~  169 (343)
T TIGR01472        94 ---SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVN  169 (343)
T ss_pred             ---hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Confidence               11122456778999999999998653111 11479999996433210         112456899999999999999


Q ss_pred             HHHhhcC---CCeEEEEecchhh---hhHH---HHHHh-cCCC-------cccccccCChhhHHHHHHHhhcC
Q psy6113         240 MAEEFKG---DNIAVNALWPRTA---IYTA---AIEML-TGGS-------ADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       240 la~e~~~---~gI~vn~v~PG~~---~~t~---~~~~~-~~~~-------~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++.++.-   .++.+|...|+..   +...   ..... ....       ......+...+|+|++++.++..
T Consensus       170 ~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~  242 (343)
T TIGR01472       170 YREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ  242 (343)
T ss_pred             HHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhc
Confidence            9887632   2234456666511   1111   11111 1110       11223456789999999888754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02650 dihydroflavonol-4-reductase

Probab=99.65  E-value=6.5e-15  Score=144.75  Aligned_cols=204  Identities=15%  Similarity=0.152  Sum_probs=140.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +.|++|||||+|.||..++++|+++|++|++++|+.+....       ........  ..++.++..|+++.+.+.++++
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKK-------VKHLLDLPGATTRLTLWKADLAVEGSFDDAIR   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH-------HHHHHhccCCCCceEEEEecCCChhhHHHHHh
Confidence            57899999999999999999999999999999997654321       11111111  2357889999999998877665


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                             .+|++||+|+.....                                                          
T Consensus        77 -------~~d~ViH~A~~~~~~----------------------------------------------------------   91 (351)
T PLN02650         77 -------GCTGVFHVATPMDFE----------------------------------------------------------   91 (351)
T ss_pred             -------CCCEEEEeCCCCCCC----------------------------------------------------------
Confidence                   479999999853210                                                          


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----c-c---------------CCchh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----W-F---------------KNHVA  225 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----~-~---------------~~~~~  225 (406)
                          .  .+.+...+++|+.+++++++++.+..   ..++||++||.....+.    + +               .....
T Consensus        92 ----~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  162 (351)
T PLN02650         92 ----S--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWM  162 (351)
T ss_pred             ----C--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccch
Confidence                1  12235678899999999999986542   13589999997543211    0 0               01237


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH--------HHHH---hcCCCc----ccccccCChhhHHHHHH
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA--------AIEM---LTGGSA----DAKATSRKPEIMADAAY  290 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~--------~~~~---~~~~~~----~~~~~~~~pe~vA~~v~  290 (406)
                      |+.||.+.+.+++.++.+   +|++++.+.|+.+..+.        +...   ......    .....+...+|+|++++
T Consensus       163 Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~  239 (351)
T PLN02650        163 YFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHI  239 (351)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHH
Confidence            999999999999888776   48999999998432221        1111   111100    01134678999999999


Q ss_pred             HhhcC
Q psy6113         291 YILSS  295 (406)
Q Consensus       291 ~L~s~  295 (406)
                      .++..
T Consensus       240 ~~l~~  244 (351)
T PLN02650        240 FLFEH  244 (351)
T ss_pred             HHhcC
Confidence            98864

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.64  E-value=8.8e-15  Score=147.93  Aligned_cols=183  Identities=15%  Similarity=0.057  Sum_probs=127.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCC---cccH------HHHHHHHH-HcCCeeeeeeec
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL---PGTI------YSAAKEVE-DAGGNCLPCIVD   73 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~---~~~i------~~~~~~~~-~~g~~~~~~~~D   73 (406)
                      ...+++|+++||||+|+||+.++++|+++|++|++++|......+.   ....      ....+.+. ..+.++.++.+|
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD  121 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence            4578899999999999999999999999999999987532211000   0000      00011111 123468889999


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCc
Q psy6113          74 IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGI  153 (406)
Q Consensus        74 l~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  153 (406)
                      ++|.+++.++++..     ++|+|||+|+.... ..                                            
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~~-~~--------------------------------------------  151 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRSA-PY--------------------------------------------  151 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCcccC-hh--------------------------------------------
Confidence            99999998888763     68999999975321 11                                            


Q ss_pred             ceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCC--------------
Q psy6113         154 DILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPF--------------  218 (406)
Q Consensus       154 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~--------------  218 (406)
                                     ...+++++...+++|+.|++++++++...    +. .++|++||...+...              
T Consensus       152 ---------------~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~  212 (442)
T PLN02572        152 ---------------SMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCHLVKLGTMGEYGTPNIDIEEGYITITHN  212 (442)
T ss_pred             ---------------hhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCccEEEEecceecCCCCCCCcccccccccc
Confidence                           13445567788899999999999988442    22 489999997543210              


Q ss_pred             --------ccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchh
Q psy6113         219 --------WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT  258 (406)
Q Consensus       219 --------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~  258 (406)
                              +..+...|+.||.+.+.+.+..+..   +|+.+..+.|+.
T Consensus       213 ~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~  257 (442)
T PLN02572        213 GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGV  257 (442)
T ss_pred             cccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEeccc
Confidence                    1122357999999999888877665   478888887764

>PLN02214 cinnamoyl-CoA reductase

Probab=99.64  E-value=6.1e-15  Score=144.49  Aligned_cols=213  Identities=18%  Similarity=0.209  Sum_probs=145.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..+++|+++||||+|.||++++++|+++|++|++++|+.+....      .....+.....++.++.+|+++.+++.+++
T Consensus         6 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   79 (342)
T PLN02214          6 ASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN------THLRELEGGKERLILCKADLQDYEALKAAI   79 (342)
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhH------HHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence            44678999999999999999999999999999999997653211      111222222245788899999999887776


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       ++|++||+|+...                                                           
T Consensus        80 ~-------~~d~Vih~A~~~~-----------------------------------------------------------   93 (342)
T PLN02214         80 D-------GCDGVFHTASPVT-----------------------------------------------------------   93 (342)
T ss_pred             h-------cCCEEEEecCCCC-----------------------------------------------------------
Confidence            5       5899999998421                                                           


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc-------c------------CCchh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW-------F------------KNHVA  225 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~-------~------------~~~~~  225 (406)
                               +++...+++|+.++.++++++..    .+-++||++||..+.++..       .            .....
T Consensus        94 ---------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~  160 (342)
T PLN02214         94 ---------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW  160 (342)
T ss_pred             ---------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccH
Confidence                     12456789999999999998843    3446999999975443210       0            02347


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH-----------HHHHhcCCCc---ccccccCChhhHHHHHHH
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA-----------AIEMLTGGSA---DAKATSRKPEIMADAAYY  291 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~-----------~~~~~~~~~~---~~~~~~~~pe~vA~~v~~  291 (406)
                      |+.||.+.+.+++.++.++   |+++..+.|+.+.-+.           ....+.....   .....+...+|+|++++.
T Consensus       161 Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~  237 (342)
T PLN02214        161 YCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVL  237 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHH
Confidence            9999999999998887764   7888888886432221           0111111110   011235679999999988


Q ss_pred             hhcCCCCCccceEEEe
Q psy6113         292 ILSSNPPSLTGQFLID  307 (406)
Q Consensus       292 L~s~~~~~~tG~~i~d  307 (406)
                      ++...  ...|.+.+.
T Consensus       238 al~~~--~~~g~yn~~  251 (342)
T PLN02214        238 VYEAP--SASGRYLLA  251 (342)
T ss_pred             HHhCc--ccCCcEEEe
Confidence            87542  234565543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.64  E-value=6.3e-15  Score=138.02  Aligned_cols=202  Identities=14%  Similarity=0.111  Sum_probs=129.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..++++++||||+|+||++++++|+++|++|+++.|+.++..          ... ..+.++.++.+|+++..  ..+  
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----------~~~-~~~~~~~~~~~Dl~d~~--~~l--   78 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK----------TSL-PQDPSLQIVRADVTEGS--DKL--   78 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH----------Hhc-ccCCceEEEEeeCCCCH--HHH--
Confidence            456899999999999999999999999999999999865421          111 11346888999999842  122  


Q ss_pred             HHHHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          86 AAVDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        86 ~i~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                        .+.+ .++|++|+|+|.......                                                       
T Consensus        79 --~~~~~~~~d~vi~~~g~~~~~~~-------------------------------------------------------  101 (251)
T PLN00141         79 --VEAIGDDSDAVICATGFRRSFDP-------------------------------------------------------  101 (251)
T ss_pred             --HHHhhcCCCEEEECCCCCcCCCC-------------------------------------------------------
Confidence              2223 369999999886421110                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-ccCCchhhhHhhHHHHHH-HHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-WFKNHVAYTISKYGMSMC-ALGMAE  242 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-~~~~~~~Y~asKaal~~l-~~~la~  242 (406)
                            .      ..+++|..++..+++++    .+.+.++||++||....... ..+....|...|.....+ .+..+.
T Consensus       102 ------~------~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e  165 (251)
T PLN00141        102 ------F------APWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAE  165 (251)
T ss_pred             ------C------CceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHH
Confidence                  0      11357888888888876    45566899999998643211 112234576666543333 333333


Q ss_pred             h-hcCCCeEEEEecchhhhhHHHHHHhc-CCCcccccccCChhhHHHHHHHhhcC
Q psy6113         243 E-FKGDNIAVNALWPRTAIYTAAIEMLT-GGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       243 e-~~~~gI~vn~v~PG~~~~t~~~~~~~-~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      + +...|++++.|.||++.+........ ...........+++|+|+.++.++..
T Consensus       166 ~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~  220 (251)
T PLN00141        166 KYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLC  220 (251)
T ss_pred             HHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcC
Confidence            3 46679999999999754432111110 01111122357999999999999865

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.64  E-value=4.5e-14  Score=138.89  Aligned_cols=208  Identities=17%  Similarity=0.136  Sum_probs=136.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEE-EEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIV-IAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vv-l~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||+|+||++++++|+++|+.++ +.+|.... ...    ... ..+ ..+.++.++.+|++|.++++++++.  
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~----~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~--   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL----MSL-APV-AQSERFAFEKVDICDRAELARVFTE--   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch----hhh-hhc-ccCCceEEEECCCcChHHHHHHHhh--
Confidence            5799999999999999999999998755 44543221 110    000 111 1234577889999999998888775  


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                         .++|+|||+||....                                                              
T Consensus        73 ---~~~D~Vih~A~~~~~--------------------------------------------------------------   87 (355)
T PRK10217         73 ---HQPDCVMHLAAESHV--------------------------------------------------------------   87 (355)
T ss_pred             ---cCCCEEEECCcccCc--------------------------------------------------------------
Confidence               269999999996421                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhH---h--cCCCeEEEeCCCCCCCC-----------CccCCchhhhHhhHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLK---K--SNHAHILNISPPLNLNP-----------FWFKNHVAYTISKYG  232 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~---~--~~~g~Iv~vsS~~~~~~-----------~~~~~~~~Y~asKaa  232 (406)
                       ..+.+++...+++|+.+++.+++++.+.|.   +  .+..++|++||...+..           .+..+...|+.||.+
T Consensus        88 -~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~  166 (355)
T PRK10217         88 -DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAS  166 (355)
T ss_pred             -chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHH
Confidence             233456788999999999999999987542   1  12358999999643220           012345689999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhh----------hhHHHHHHhcCCCc------ccccccCChhhHHHHHHHhhcC
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTA----------IYTAAIEMLTGGSA------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~----------~~t~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      .+.+++.+++++   ++++..+.|+.+          +...+.........      .....+...+|+++++..++..
T Consensus       167 ~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        167 SDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             HHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            999999998876   344444444311          11111222211110      1123456899999999888754

>PLN02240 UDP-glucose 4-epimerase

Probab=99.63  E-value=9e-15  Score=143.57  Aligned_cols=174  Identities=18%  Similarity=0.164  Sum_probs=122.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +.|++|+++||||+|+||.+++++|+++|++|++++|......+   ............+.++.++.+|+++++++.+++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~   77 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEE---ALRRVKELAGDLGDNLVFHKVDLRDKEALEKVF   77 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHH---HHHHHHHhhcccCccceEEecCcCCHHHHHHHH
Confidence            35778999999999999999999999999999999876443211   001111111112346788999999999998887


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..     ++|++||+||....                                                          
T Consensus        78 ~~~-----~~d~vih~a~~~~~----------------------------------------------------------   94 (352)
T PLN02240         78 AST-----RFDAVIHFAGLKAV----------------------------------------------------------   94 (352)
T ss_pred             HhC-----CCCEEEEccccCCc----------------------------------------------------------
Confidence            652     79999999996432                                                          


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSM  235 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~  235 (406)
                           ..+.+++...+++|+.++..+++++    ++.+..++|++||...+...         +..+...|+.||.+.+.
T Consensus        95 -----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (352)
T PLN02240         95 -----GESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEE  165 (352)
T ss_pred             -----cccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence                 1122356778999999999998865    44455699999996432110         11245689999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEec
Q psy6113         236 CALGMAEEFKGDNIAVNALW  255 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~  255 (406)
                      +++.++.+.  .++.+..+.
T Consensus       166 ~~~~~~~~~--~~~~~~~~R  183 (352)
T PLN02240        166 ICRDIHASD--PEWKIILLR  183 (352)
T ss_pred             HHHHHHHhc--CCCCEEEEe
Confidence            999887652  244444443

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.61  E-value=1.5e-14  Score=140.26  Aligned_cols=213  Identities=16%  Similarity=0.166  Sum_probs=141.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH---cCCeeeeeeecCCChHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED---AGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~---~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +||+++||||+|.||+.++++|+++|++|++++|+......        ...+..   ...++.++.+|+++++++.+++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK--------TEHLLALDGAKERLHLFKANLLEEGSFDSVV   74 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh--------HHHHHhccCCCCceEEEeccccCcchHHHHH
Confidence            47899999999999999999999999999999987654211        111111   1246788999999998877765


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       .+|++||+|+.....                                                         
T Consensus        75 ~-------~~d~Vih~A~~~~~~---------------------------------------------------------   90 (322)
T PLN02662         75 D-------GCEGVFHTASPFYHD---------------------------------------------------------   90 (322)
T ss_pred             c-------CCCEEEEeCCcccCC---------------------------------------------------------
Confidence            4       579999999864210                                                         


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-C-CCcc-------------C-----Cch
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-N-PFWF-------------K-----NHV  224 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~-~~~~-------------~-----~~~  224 (406)
                           ..  +.....+++|+.++.++++++....   +-.+||++||.++. . +.+.             +     ...
T Consensus        91 -----~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~  160 (322)
T PLN02662         91 -----VT--DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL  160 (322)
T ss_pred             -----CC--ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccc
Confidence                 00  1124678999999999999875321   34699999997532 1 1000             0     014


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH-----------HHHHhcCCC--cccccccCChhhHHHHHHH
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA-----------AIEMLTGGS--ADAKATSRKPEIMADAAYY  291 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~-----------~~~~~~~~~--~~~~~~~~~pe~vA~~v~~  291 (406)
                      .|+.||...+.+++.++++   +|+++..+.|+.+....           .........  ......+...+|+|++++.
T Consensus       161 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  237 (322)
T PLN02662        161 WYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQ  237 (322)
T ss_pred             hHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHH
Confidence            7999999988888877655   37999999998532211           011111110  0111235688999999998


Q ss_pred             hhcCCCCCccceEEEe
Q psy6113         292 ILSSNPPSLTGQFLID  307 (406)
Q Consensus       292 L~s~~~~~~tG~~i~d  307 (406)
                      ++....  ..|.+...
T Consensus       238 ~~~~~~--~~~~~~~~  251 (322)
T PLN02662        238 AFEIPS--ASGRYCLV  251 (322)
T ss_pred             HhcCcC--cCCcEEEe
Confidence            886432  24555544

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.59  E-value=4.9e-14  Score=138.63  Aligned_cols=172  Identities=18%  Similarity=0.189  Sum_probs=122.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+++++||||+|.||..++++|+++|++|++++|+.++..       .....+. .+.++.++.+|+++.+++.++++  
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--   78 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSL-------HLLSKWK-EGDRLRLFRADLQEEGSFDEAVK--   78 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHH-------HHHHhhc-cCCeEEEEECCCCCHHHHHHHHc--
Confidence            5788999999999999999999999999999988754321       1122222 24568889999999998877664  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           .+|++||+|+........                                                         
T Consensus        79 -----~~d~Vih~A~~~~~~~~~---------------------------------------------------------   96 (353)
T PLN02896         79 -----GCDGVFHVAASMEFDVSS---------------------------------------------------------   96 (353)
T ss_pred             -----CCCEEEECCccccCCccc---------------------------------------------------------
Confidence                 489999999975432100                                                         


Q ss_pred             CCCCchhhH--HHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------c---------------CC
Q psy6113         168 TANTPLKKY--DLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------F---------------KN  222 (406)
Q Consensus       168 ~~~~~~~~~--~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------~---------------~~  222 (406)
                       ...+.+.+  ..++++|+.++.++++++.+..   +.++||++||.+.+....        .               +.
T Consensus        97 -~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~  172 (353)
T PLN02896         97 -DHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKAS  172 (353)
T ss_pred             -cccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCC
Confidence             01222222  4577888899999999886542   236999999975543110        0               12


Q ss_pred             chhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchh
Q psy6113         223 HVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT  258 (406)
Q Consensus       223 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~  258 (406)
                      ...|+.||.+.+.+++.+++++   |+++.++.|+.
T Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~  205 (353)
T PLN02896        173 GWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTT  205 (353)
T ss_pred             CccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCc
Confidence            2379999999999998887664   78999998853

>KOG1502|consensus

Probab=99.59  E-value=8e-14  Score=132.01  Aligned_cols=220  Identities=19%  Similarity=0.183  Sum_probs=154.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+++++||||+|-||..++++|+++||.|..+.|+++..+.     .+...+++....+...+..|++++++...+++  
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-----~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-----TEHLRKLEGAKERLKLFKADLLDEGSFDKAID--   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-----HHHHHhcccCcccceEEeccccccchHHHHHh--
Confidence            78999999999999999999999999999999999987322     12344555556678899999999999988877  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           +.|+++|.|.......                                                           
T Consensus        78 -----gcdgVfH~Asp~~~~~-----------------------------------------------------------   93 (327)
T KOG1502|consen   78 -----GCDGVFHTASPVDFDL-----------------------------------------------------------   93 (327)
T ss_pred             -----CCCEEEEeCccCCCCC-----------------------------------------------------------
Confidence                 5899999998653321                                                           


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCc-c-C--------C----------chhh
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFW-F-K--------N----------HVAY  226 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~-~-~--------~----------~~~Y  226 (406)
                         .+  .-.++++..+.|+.++.+++.    +.+ -.|||++||.++...+. . .        .          ...|
T Consensus        94 ---~~--~e~~li~pav~Gt~nVL~ac~----~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   94 ---ED--PEKELIDPAVKGTKNVLEACK----KTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             ---CC--cHHhhhhHHHHHHHHHHHHHh----ccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence               11  123578889999999999983    333 36999999998876541 0 0        0          1258


Q ss_pred             hHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHH-----------HHhcCCC---cccccccCChhhHHHHHHHh
Q psy6113         227 TISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAI-----------EMLTGGS---ADAKATSRKPEIMADAAYYI  292 (406)
Q Consensus       227 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~-----------~~~~~~~---~~~~~~~~~pe~vA~~v~~L  292 (406)
                      ..||.--+.-+..+|.|   .|+...+|+|+.+.-+.+.           ..+.+..   ......+.+.+|||.+-+++
T Consensus       165 ~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence            88886655555555544   3689999999854433211           1111111   11112356899999999999


Q ss_pred             hcCCCCCccceEEEehhHHH
Q psy6113         293 LSSNPPSLTGQFLIDDEVLK  312 (406)
Q Consensus       293 ~s~~~~~~tG~~i~d~g~~~  312 (406)
                      ...+  .-.|++++.+....
T Consensus       242 ~E~~--~a~GRyic~~~~~~  259 (327)
T KOG1502|consen  242 LEKP--SAKGRYICVGEVVS  259 (327)
T ss_pred             HcCc--ccCceEEEecCccc
Confidence            9654  34599996665443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.58  E-value=1.2e-13  Score=133.00  Aligned_cols=204  Identities=15%  Similarity=0.109  Sum_probs=135.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++||||+|+||.+++++|+++|  ++|++.+|.......      +..+.+. ...++.++.+|+++++++.++++.. 
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNL------ENLADLE-DNPRYRFVKGDIGDRELVSRLFTEH-   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhh------hhhhhhc-cCCCcEEEEcCCcCHHHHHHHHhhc-
Confidence            48999999999999999999988  688888764321110      0011111 1235778899999999998887653 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++||+|+....                                                              
T Consensus        73 ----~~d~vi~~a~~~~~--------------------------------------------------------------   86 (317)
T TIGR01181        73 ----QPDAVVHFAAESHV--------------------------------------------------------------   86 (317)
T ss_pred             ----CCCEEEEcccccCc--------------------------------------------------------------
Confidence                58999999986432                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------ccCCchhhhHhhHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------WFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------~~~~~~~Y~asKaal~~l~~  238 (406)
                       +.+.+.++..+++|+.++..+++++...+.   ..++|++||...+...          +..+...|+.+|.+.+.+++
T Consensus        87 -~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  162 (317)
T TIGR01181        87 -DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVR  162 (317)
T ss_pred             -hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHH
Confidence             122344567889999999999988755432   2489999996432211          01234579999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhH---------HHHHHhcCCCcc-------cccccCChhhHHHHHHHhhcC
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYT---------AAIEMLTGGSAD-------AKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~~~~~~~~-------~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      .++.++   ++++..+.|+.+..+         .+..........       ....+...+|+|+++..++.+
T Consensus       163 ~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~  232 (317)
T TIGR01181       163 AYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK  232 (317)
T ss_pred             HHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC
Confidence            987764   677888877632211         111111111100       112345789999999988864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.57  E-value=3.3e-13  Score=131.68  Aligned_cols=164  Identities=16%  Similarity=0.180  Sum_probs=115.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++||||+|+||+.++++|+++|++|++++|..+....       ....+.. .+.++.++.+|++|.+++.++++.   
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRS-------VLPVIERLGGKHPTFVEGDIRNEALLTEILHD---   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHh-------HHHHHHHhcCCCceEEEccCCCHHHHHHHHhc---
Confidence            58999999999999999999999999998775433211       1122222 234567788999999988887653   


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                        .++|++||+||......                                                             
T Consensus        72 --~~~d~vvh~a~~~~~~~-------------------------------------------------------------   88 (338)
T PRK10675         72 --HAIDTVIHFAGLKAVGE-------------------------------------------------------------   88 (338)
T ss_pred             --CCCCEEEECCccccccc-------------------------------------------------------------
Confidence              36999999998653211                                                             


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------cc-CCchhhhHhhHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WF-KNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~-~~~~~Y~asKaal~~l~~~  239 (406)
                        ..+.....+++|+.++..+++++    ++.+.++||++||...+...         +. .+...|+.+|.+.+.+++.
T Consensus        89 --~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~  162 (338)
T PRK10675         89 --SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTD  162 (338)
T ss_pred             --hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHH
Confidence              11223457789999999988765    55555789999997533210         00 2357899999999999999


Q ss_pred             HHHhhcCCCeEEEEec
Q psy6113         240 MAEEFKGDNIAVNALW  255 (406)
Q Consensus       240 la~e~~~~gI~vn~v~  255 (406)
                      ++++..  ++++..+.
T Consensus       163 ~~~~~~--~~~~~ilR  176 (338)
T PRK10675        163 LQKAQP--DWSIALLR  176 (338)
T ss_pred             HHHhcC--CCcEEEEE
Confidence            877643  34444443

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.56  E-value=4.9e-13  Score=131.33  Aligned_cols=210  Identities=18%  Similarity=0.164  Sum_probs=132.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++||||+|+||+.++++|+++|++ |+.+++......     ... ...+. .+.++.++.+|++|.+++++++++   
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-----~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-----LES-LADVS-DSERYVFEHADICDRAELDRIFAQ---   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-----HHH-HHhcc-cCCceEEEEecCCCHHHHHHHHHh---
Confidence            5899999999999999999999986 444554321100     001 11111 134577889999999999888875   


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                        .++|++||+||.....                                                              
T Consensus        72 --~~~d~vih~A~~~~~~--------------------------------------------------------------   87 (352)
T PRK10084         72 --HQPDAVMHLAAESHVD--------------------------------------------------------------   87 (352)
T ss_pred             --cCCCEEEECCcccCCc--------------------------------------------------------------
Confidence              2799999999964321                                                              


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-----CCCeEEEeCCCCCCCCC-------------------ccCCchh
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-----NHAHILNISPPLNLNPF-------------------WFKNHVA  225 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~Iv~vsS~~~~~~~-------------------~~~~~~~  225 (406)
                       .+....+..+++|+.|+.++++++.++|...     +..++|++||...+...                   +..+...
T Consensus        88 -~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~  166 (352)
T PRK10084         88 -RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSP  166 (352)
T ss_pred             -chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCCh
Confidence             1112345678999999999999998876431     23489999996433210                   1123468


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEE---ecchh----hhhHHHHHHhcCCC------cccccccCChhhHHHHHHHh
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNA---LWPRT----AIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYI  292 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~---v~PG~----~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L  292 (406)
                      |+.||.+.+.+++.++.+++-..+.++.   .-|+-    .+............      ......+...+|+|+++..+
T Consensus       167 Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~  246 (352)
T PRK10084        167 YSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKV  246 (352)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence            9999999999999998876433333321   12220    11111112221111      01122346789999999887


Q ss_pred             hcC
Q psy6113         293 LSS  295 (406)
Q Consensus       293 ~s~  295 (406)
                      +..
T Consensus       247 l~~  249 (352)
T PRK10084        247 VTE  249 (352)
T ss_pred             Hhc
Confidence            754

>PF02036 SCP2: SCP-2 sterol transfer family; InterPro: IPR003033 This domain is involved in binding sterols, and is found in proteins such as SCP2

Probab=99.54  E-value=1.3e-14  Score=116.69  Aligned_cols=68  Identities=41%  Similarity=0.742  Sum_probs=62.7

Q ss_pred             ceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHH
Q psy6113         332 SWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMG  400 (406)
Q Consensus       332 ~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~  400 (406)
                      .|++++++|++.+.++.. .+|||+|+++.++|.+|..|+++|+.|||+|||||+||++++|+++.+|+
T Consensus        35 ~~~l~~~~g~~~~~~~~~-~~~d~~i~~~~~~~~~l~~g~~~~~~a~~~gklki~Gd~~~~~~~~~l~~  102 (102)
T PF02036_consen   35 AWYLDIKDGKLRVGEGDD-EEADVTITGSYEDLLKLLTGELDPMQAFMSGKLKIEGDLMLAMRLQKLFK  102 (102)
T ss_dssp             EEEEEETTTTEEEEESSS-SS-SEEEEEEHHHHHHHHTTSS-HHHHHHTTSSEEEESHHHHHHHHHHHH
T ss_pred             EEEEEEECCEEEEecCCC-CCCcEEEEEeHHHHHHHHcCCCCchhhhhCCcEEEEcCHHHHHHHHHhhC
Confidence            899999999999887654 78999999999999999999999999999999999999999999999985

This domain has a 3-layer alpha/beta/alpha fold, composed of alpha/beta(3)/(crossover)/beta/(alpha)/beta. The human sterol carrier protein 2 (SCP2) is a basic protein that is believed to participate in the intracellular transport of cholesterol and various other lipids []. The Unc-24 protein of Caenorhabditis elegans contains a domain similar to part of two ion channel regulators (the erythrocyte integral membrane protein stomatin and the C. elegans neuronal protein MEC-2) juxtaposed to a domain similar to nonspecific lipid transfer protein (nsLTP; also called sterol carrier protein 2) [].; GO: 0032934 sterol binding; PDB: 2KSH_A 2KSI_A 1PZ4_A 1C44_A 2CX7_B 1WFR_A 1QND_A 2C0L_B 1IKT_A 3BKR_A ....

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.52  E-value=8.5e-13  Score=129.58  Aligned_cols=214  Identities=14%  Similarity=0.152  Sum_probs=134.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcC--------CeeeeeeecCCChHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG--------GNCLPCIVDIRDEHAV   80 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g--------~~~~~~~~Dl~~~~~v   80 (406)
                      +++||||+|+||+.++++|+++|  ++|+++.|+.+....    .+...+.+....        .++.++.+|++++.-.
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~g   76 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHA----MERLREALRSYRLWQEDLARERIEVVAGDLSEPRLG   76 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHH----HHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCC
Confidence            48999999999999999999999  679999997653110    111111121111        4688899999875310


Q ss_pred             --HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          81 --QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        81 --~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                        ......+   ...+|++||||+....                                                    
T Consensus        77 l~~~~~~~~---~~~~d~vih~a~~~~~----------------------------------------------------  101 (367)
T TIGR01746        77 LSDAEWERL---AENVDTIVHNGALVNW----------------------------------------------------  101 (367)
T ss_pred             cCHHHHHHH---HhhCCEEEeCCcEecc----------------------------------------------------
Confidence              0111222   2468999999986421                                                    


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------------cCCch
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------------FKNHV  224 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------------~~~~~  224 (406)
                                 .   ..+....++|+.++..+++.+.    +.+..+++++||........              .....
T Consensus       102 -----------~---~~~~~~~~~nv~g~~~ll~~a~----~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~  163 (367)
T TIGR01746       102 -----------V---YPYSELRAANVLGTREVLRLAA----SGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAG  163 (367)
T ss_pred             -----------C---CcHHHHhhhhhHHHHHHHHHHh----hCCCceEEEEccccccCCcCCCCccccccccccccccCC
Confidence                       1   1245567889999999888774    34445699999987654310              01134


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH---------HHH-HHh----c-CCCcc-c--ccccCChhhHH
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT---------AAI-EML----T-GGSAD-A--KATSRKPEIMA  286 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~-~~~----~-~~~~~-~--~~~~~~pe~vA  286 (406)
                      .|+.||.+.+.+.+..+.    .|++++.+.||.+..+         .+. ...    . ..... .  ...+...+++|
T Consensus       164 ~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva  239 (367)
T TIGR01746       164 GYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVA  239 (367)
T ss_pred             ChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHH
Confidence            799999999988876544    3899999999864432         011 110    0 00000 1  12256789999


Q ss_pred             HHHHHhhcCCCCCccceEE
Q psy6113         287 DAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       287 ~~v~~L~s~~~~~~tG~~i  305 (406)
                      ++++.++.......+|+.+
T Consensus       240 ~ai~~~~~~~~~~~~~~~~  258 (367)
T TIGR01746       240 RAIVALSSQPAASAGGPVF  258 (367)
T ss_pred             HHHHHHHhCCCcccCCceE
Confidence            9999998654433345544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.52  E-value=1.6e-12  Score=127.61  Aligned_cols=173  Identities=15%  Similarity=0.090  Sum_probs=120.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+++|+++||||+|-||..++++|+++|++|++++|........   +........ ....++.++.+|++|.+++..+
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHN---LDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA   87 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhh---hhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence            457889999999999999999999999999999999865432210   000000000 0113577889999998887666


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++       .+|++||.|+......                                                       
T Consensus        88 ~~-------~~d~ViHlAa~~~~~~-------------------------------------------------------  105 (348)
T PRK15181         88 CK-------NVDYVLHQAALGSVPR-------------------------------------------------------  105 (348)
T ss_pred             hh-------CCCEEEECccccCchh-------------------------------------------------------
Confidence            54       4899999999643211                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMS  234 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~  234 (406)
                              +.++....+++|+.|+.++++++    ++.+-.++|++||...+...         ...+...|+.||.+.+
T Consensus       106 --------~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e  173 (348)
T PRK15181        106 --------SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNE  173 (348)
T ss_pred             --------hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHH
Confidence                    11223456889999999999887    44455699999997543211         0113457999999999


Q ss_pred             HHHHHHHHhhcCCCeEEEEecch
Q psy6113         235 MCALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       235 ~l~~~la~e~~~~gI~vn~v~PG  257 (406)
                      .+.+.++.++   |+++..+.|+
T Consensus       174 ~~~~~~~~~~---~~~~~~lR~~  193 (348)
T PRK15181        174 LYADVFARSY---EFNAIGLRYF  193 (348)
T ss_pred             HHHHHHHHHh---CCCEEEEEec
Confidence            9888776553   6777777775

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.50  E-value=5.7e-13  Score=128.86  Aligned_cols=165  Identities=15%  Similarity=0.110  Sum_probs=117.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|+||+.++++|+++|++|++++|.......       ....+... .++..+.+|+++.++++++++.    
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~----   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPE-------ALKRGERI-TRVTFVEGDLRDRELLDRLFEE----   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchh-------hhhhhccc-cceEEEECCCCCHHHHHHHHHh----
Confidence            37899999999999999999999999988764432111       11111111 2577888999999999888763    


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                       +++|++|||||......                                                              
T Consensus        69 -~~~d~vv~~ag~~~~~~--------------------------------------------------------------   85 (328)
T TIGR01179        69 -HKIDAVIHFAGLIAVGE--------------------------------------------------------------   85 (328)
T ss_pred             -CCCcEEEECccccCcch--------------------------------------------------------------
Confidence             47999999999653211                                                              


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~la  241 (406)
                       ..++....+++|+.++..+++++    .+.+..++|++||...+...         +..+...|+.+|++.+.+++.++
T Consensus        86 -~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179        86 -SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             -hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence             11233456788999999998875    34445699999986543211         01134679999999999999987


Q ss_pred             HhhcCCCeEEEEecch
Q psy6113         242 EEFKGDNIAVNALWPR  257 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG  257 (406)
                      .+.  .++++..+.|+
T Consensus       161 ~~~--~~~~~~ilR~~  174 (328)
T TIGR01179       161 KAD--PGLSYVILRYF  174 (328)
T ss_pred             Hhc--cCCCEEEEecC
Confidence            762  36778888774

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.50  E-value=5.7e-13  Score=129.14  Aligned_cols=194  Identities=22%  Similarity=0.237  Sum_probs=133.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++||||+|+||+.++++|+++|++|++++|+.+.....           .  ...+.++.+|+++.++++++++    
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~--~~~~~~~~~D~~~~~~l~~~~~----   63 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-----------E--GLDVEIVEGDLRDPASLRKAVA----   63 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc-----------c--cCCceEEEeeCCCHHHHHHHHh----
Confidence            3689999999999999999999999999999987643211           1  1247788999999998877664    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         .+|++||+|+....                                                               
T Consensus        64 ---~~d~vi~~a~~~~~---------------------------------------------------------------   77 (328)
T TIGR03466        64 ---GCRALFHVAADYRL---------------------------------------------------------------   77 (328)
T ss_pred             ---CCCEEEEeceeccc---------------------------------------------------------------
Confidence               57999999984311                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc-------------CCchhhhHhhHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF-------------KNHVAYTISKYGMSMC  236 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~-------------~~~~~Y~asKaal~~l  236 (406)
                        ..+++...+++|+.++..+++++.    +.+.+++|++||...+.+...             .....|+.+|.+.+.+
T Consensus        78 --~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  151 (328)
T TIGR03466        78 --WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQA  151 (328)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHH
Confidence              112356678899999999988874    344569999999765432100             0134799999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhH----------HHHHHhcCCCc---ccccccCChhhHHHHHHHhhcC
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYT----------AAIEMLTGGSA---DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t----------~~~~~~~~~~~---~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++.++.+   +|+++..+.|+.+...          .+.........   .....+...+|+|++++.++..
T Consensus       152 ~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  220 (328)
T TIGR03466       152 ALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALER  220 (328)
T ss_pred             HHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhC
Confidence            9988765   3788888888643211          01111111100   0112245688999988877754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.49  E-value=2.6e-12  Score=128.31  Aligned_cols=217  Identities=16%  Similarity=0.141  Sum_probs=159.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .++||+++||||+|-||.++|+++++.+. ++++.+|++.+       ++....++...  ..+..++-+|+.|.+.+++
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~-------~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~  319 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYK-------LYLIDMELREKFPELKLRFYIGDVRDRDRVER  319 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHH-------HHHHHHHHHhhCCCcceEEEecccccHHHHHH
Confidence            57899999999999999999999999986 78899998875       45566666653  3578889999999999998


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++..     ++|+++|.|+.=+-+.                                                      
T Consensus       320 ~~~~~-----kvd~VfHAAA~KHVPl------------------------------------------------------  340 (588)
T COG1086         320 AMEGH-----KVDIVFHAAALKHVPL------------------------------------------------------  340 (588)
T ss_pred             HHhcC-----CCceEEEhhhhccCcc------------------------------------------------------
Confidence            88754     6999999998533221                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                               -.....+.+.+|+.|+.++++++    .+.+-.++|.+|+--+..|-     ..|++||...+.+.++++.
T Consensus       341 ---------~E~nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~Pt-----NvmGaTKr~aE~~~~a~~~  402 (588)
T COG1086         341 ---------VEYNPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNPT-----NVMGATKRLAEKLFQAANR  402 (588)
T ss_pred             ---------hhcCHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCCc-----hHhhHHHHHHHHHHHHHhh
Confidence                     12234667899999999999999    55556789999999888763     5799999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhh------HHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         243 EFKGDNIAVNALWPRTAIY------TAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~------t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +....+-++.+|.=|-+..      +-+.+.+....      +.....+++-.|.++.++.....   .-.|+++ .|-|
T Consensus       403 ~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~---~~gGeifvldMG  479 (588)
T COG1086         403 NVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI---AKGGEIFVLDMG  479 (588)
T ss_pred             ccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh---cCCCcEEEEcCC
Confidence            8765456666665543221      22222222221      11223456888888888876643   3456665 5554

>PLN02686 cinnamoyl-CoA reductase

Probab=99.49  E-value=7.2e-13  Score=131.07  Aligned_cols=206  Identities=17%  Similarity=0.232  Sum_probs=134.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc------CCeeeeeeecCCChH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA------GGNCLPCIVDIRDEH   78 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~------g~~~~~~~~Dl~~~~   78 (406)
                      ..+++|+++||||+|+||++++++|+++|++|+++.|+.+..+       .. ..+...      ...+.++.+|++|.+
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-------~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~  120 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-------KL-REMEMFGEMGRSNDGIWTVMANLTEPE  120 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HH-HHHhhhccccccCCceEEEEcCCCCHH
Confidence            4578999999999999999999999999999998888754311       11 122111      124778899999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      ++.++++       .+|.+||.|+........                                                
T Consensus       121 ~l~~~i~-------~~d~V~hlA~~~~~~~~~------------------------------------------------  145 (367)
T PLN02686        121 SLHEAFD-------GCAGVFHTSAFVDPAGLS------------------------------------------------  145 (367)
T ss_pred             HHHHHHH-------hccEEEecCeeecccccc------------------------------------------------
Confidence            9888776       368889988865322110                                                


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCC-CC----CCc--------------
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN-LN----PFW--------------  219 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~-~~----~~~--------------  219 (406)
                                 .    ......++|+.+...+++++...   .+-.++|++||..+ ..    +..              
T Consensus       146 -----------~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        146 -----------G----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             -----------c----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence                       0    01234567888888888876321   13458999999631 11    000              


Q ss_pred             --cCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH--------HHHHhcCCC---cccccccCChhhHH
Q psy6113         220 --FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA--------AIEMLTGGS---ADAKATSRKPEIMA  286 (406)
Q Consensus       220 --~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~--------~~~~~~~~~---~~~~~~~~~pe~vA  286 (406)
                        ..+...|+.||.+.+.+++.++.+   +|+++++|.|+++..+.        .........   ......+...+|+|
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva  284 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLA  284 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHH
Confidence              012347999999999999888776   48999999998532221        111111110   00111245688899


Q ss_pred             HHHHHhhc
Q psy6113         287 DAAYYILS  294 (406)
Q Consensus       287 ~~v~~L~s  294 (406)
                      ++++.++.
T Consensus       285 ~A~~~al~  292 (367)
T PLN02686        285 EAHVCVYE  292 (367)
T ss_pred             HHHHHHHh
Confidence            88877775

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.48  E-value=3.4e-12  Score=127.14  Aligned_cols=200  Identities=13%  Similarity=0.137  Sum_probs=133.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..++++++||||+|.||+.++++|+++|++|++++|+..+....     ....+.......+.++.+|++|++++.++++
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-----~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~  131 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGK-----NGKEDTKKELPGAEVVFGDVTDADSLRKVLF  131 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhcccc-----chhhHHhhhcCCceEEEeeCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999987643210     0111122223467889999999999988877


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ..   .+++|++|||+|.....                                                          
T Consensus       132 ~~---~~~~D~Vi~~aa~~~~~----------------------------------------------------------  150 (390)
T PLN02657        132 SE---GDPVDVVVSCLASRTGG----------------------------------------------------------  150 (390)
T ss_pred             Hh---CCCCcEEEECCccCCCC----------------------------------------------------------
Confidence            53   12799999998842110                                                          


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                            .    ...+++|+.+..++++++    ++.+.+++|++||.....+     ...|..+|...+...+.     .
T Consensus       151 ------~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~p-----~~~~~~sK~~~E~~l~~-----~  206 (390)
T PLN02657        151 ------V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQKP-----LLEFQRAKLKFEAELQA-----L  206 (390)
T ss_pred             ------C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccCc-----chHHHHHHHHHHHHHHh-----c
Confidence                  0    112356777777777765    5556679999999865433     34688899888776543     2


Q ss_pred             CCCeEEEEecchhhhhHH--HHHHhcCCCc-----c-cc--cccCChhhHHHHHHHhhcC
Q psy6113         246 GDNIAVNALWPRTAIYTA--AIEMLTGGSA-----D-AK--ATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~--~~~~~~~~~~-----~-~~--~~~~~pe~vA~~v~~L~s~  295 (406)
                      ..+++...|.|+.+....  ..........     . ..  ..+...+|+|..++.++.+
T Consensus       207 ~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~  266 (390)
T PLN02657        207 DSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLD  266 (390)
T ss_pred             cCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhC
Confidence            468999999997543221  1122211110     0 00  1235678999998888754

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.44  E-value=3.9e-12  Score=117.29  Aligned_cols=199  Identities=18%  Similarity=0.210  Sum_probs=139.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++||||+|-||.+++++|.++|+.|+...|+.....         ... ..  .++.++.+|+.+.+.++++++..    
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~---------~~~-~~--~~~~~~~~dl~~~~~~~~~~~~~----   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSES---------FEE-KK--LNVEFVIGDLTDKEQLEKLLEKA----   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGH---------HHH-HH--TTEEEEESETTSHHHHHHHHHHH----
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccc---------ccc-cc--ceEEEEEeecccccccccccccc----
Confidence            699999999999999999999999998888766411         111 11  17889999999999999998876    


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                       .+|.+||+|+....                                                               ..
T Consensus        65 -~~d~vi~~a~~~~~---------------------------------------------------------------~~   80 (236)
T PF01370_consen   65 -NIDVVIHLAAFSSN---------------------------------------------------------------PE   80 (236)
T ss_dssp             -TESEEEEEBSSSSH---------------------------------------------------------------HH
T ss_pred             -CceEEEEeeccccc---------------------------------------------------------------cc
Confidence             79999999996421                                                               11


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      +.+.....++.|+.+...+++++    .+.+..++|++||...+...         +......|+.+|...+.+.+.+..
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            22455677888988888887777    55555799999996433221         012346799999999999998887


Q ss_pred             hhcCCCeEEEEecchhhhhHH------------HHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCC
Q psy6113         243 EFKGDNIAVNALWPRTAIYTA------------AIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~------------~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +.   ++++..+.|+.+....            +........       ......+...+|+|+++++++....
T Consensus       157 ~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  227 (236)
T PF01370_consen  157 KY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK  227 (236)
T ss_dssp             HH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             cc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC
Confidence            75   6888888875322211            222222211       0112234568999999999987543

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.43  E-value=7.7e-12  Score=124.57  Aligned_cols=168  Identities=16%  Similarity=0.135  Sum_probs=114.1

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++.++++||||+|-||+.++++|+++ |++|++++|+.++...+       .... .....++.++.+|++|.+.+.++
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l-------~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   83 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHL-------LEPDTVPWSGRIQFHRINIKHDSRLEGL   83 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhh-------hccccccCCCCeEEEEcCCCChHHHHHH
Confidence            345568999999999999999999998 58999998875432110       0000 01123688899999999887776


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++       .+|++||+|+.......                                                      
T Consensus        84 ~~-------~~d~ViHlAa~~~~~~~------------------------------------------------------  102 (386)
T PLN02427         84 IK-------MADLTINLAAICTPADY------------------------------------------------------  102 (386)
T ss_pred             hh-------cCCEEEEcccccChhhh------------------------------------------------------
Confidence            64       37999999996532111                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-------cc----------------
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-------WF----------------  220 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-------~~----------------  220 (406)
                            ...+   ...+..|+.+..++++++.    +.+ .++|++||...+...       ..                
T Consensus       103 ------~~~~---~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~  168 (386)
T PLN02427        103 ------NTRP---LDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES  168 (386)
T ss_pred             ------hhCh---HHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence                  1111   2334579999998888763    333 689999996432110       00                


Q ss_pred             --------CCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchh
Q psy6113         221 --------KNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT  258 (406)
Q Consensus       221 --------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~  258 (406)
                              .....|+.||.+.+.+++.++..   +|+.+..+.|+.
T Consensus       169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~  211 (386)
T PLN02427        169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFN  211 (386)
T ss_pred             ccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccc
Confidence                    01236999999999888776544   478888888863

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.42  E-value=8.9e-13  Score=123.78  Aligned_cols=210  Identities=14%  Similarity=0.172  Sum_probs=136.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHc--CCee----eeeeecCCChHHHHHHH
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNC----LPCIVDIRDEHAVQSAV   84 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~----~~~~~Dl~~~~~v~~~~   84 (406)
                      ++||||+|-||.+++++|++.+. +|++++|++..       ++....++...  +.++    ..+.+|++|.+.+.+++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~-------l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~   73 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENK-------LYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIF   73 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHH-------HHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHT
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhH-------HHHHHHHHhhcccccCcccccCceeecccCHHHHHHHH
Confidence            69999999999999999999984 79999999765       45556666432  2223    34578999999988887


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ++.     ++|+++|.|+.=..+..                                                       
T Consensus        74 ~~~-----~pdiVfHaAA~KhVpl~-------------------------------------------------------   93 (293)
T PF02719_consen   74 EEY-----KPDIVFHAAALKHVPLM-------------------------------------------------------   93 (293)
T ss_dssp             T-------T-SEEEE------HHHH-------------------------------------------------------
T ss_pred             hhc-----CCCEEEEChhcCCCChH-------------------------------------------------------
Confidence            654     79999999995322111                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +   +...+.+++|+.|+.++++++..    .+-.++|++|+--+..|     ...|++||.-.+.+..+.+...
T Consensus        94 -----E---~~p~eav~tNv~GT~nv~~aa~~----~~v~~~v~ISTDKAv~P-----tnvmGatKrlaE~l~~~~~~~~  156 (293)
T PF02719_consen   94 -----E---DNPFEAVKTNVLGTQNVAEAAIE----HGVERFVFISTDKAVNP-----TNVMGATKRLAEKLVQAANQYS  156 (293)
T ss_dssp             -----C---CCHHHHHHHHCHHHHHHHHHHHH----TT-SEEEEEEECGCSS-------SHHHHHHHHHHHHHHHHCCTS
T ss_pred             -----H---hCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEccccccCCC-----CcHHHHHHHHHHHHHHHHhhhC
Confidence                 2   23466789999999999999954    45569999999888765     3589999999999999999988


Q ss_pred             cCCCeEEEEecchhhhh------HHHHHHhcCCCc------ccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         245 KGDNIAVNALWPRTAIY------TAAIEMLTGGSA------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~------t~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      +..+.++.+|.=|.+..      +-+.+.+....+      .....+.+++|.++.++..+.-.   ..|+++ .+-
T Consensus       157 ~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~---~~geifvl~m  230 (293)
T PF02719_consen  157 GNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA---KGGEIFVLDM  230 (293)
T ss_dssp             SSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH-----TTEEEEE--
T ss_pred             CCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC---CCCcEEEecC
Confidence            66677777776553322      223333332211      12234679999999998876431   346655 444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.36  E-value=2.9e-11  Score=116.60  Aligned_cols=157  Identities=16%  Similarity=0.138  Sum_probs=104.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      ++||||+|.||..++++|.++|+ .|++++|..... .        ...+   ..  ..+..|+++.+.++.+.+.   .
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~--------~~~~---~~--~~~~~d~~~~~~~~~~~~~---~   63 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K--------FLNL---AD--LVIADYIDKEDFLDRLEKG---A   63 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h--------hhhh---hh--eeeeccCcchhHHHHHHhh---c
Confidence            58999999999999999999998 688887754321 1        0111   11  2456788887776665543   3


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                      +.++|++||+|+...                                                                 
T Consensus        64 ~~~~D~vvh~A~~~~-----------------------------------------------------------------   78 (314)
T TIGR02197        64 FGKIEAIFHQGACSD-----------------------------------------------------------------   78 (314)
T ss_pred             cCCCCEEEECccccC-----------------------------------------------------------------
Confidence            568999999999532                                                                 


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~la  241 (406)
                      .+.++....+++|+.++..+++++..    .+ .++|++||...+...         ...+...|+.||.+.+.+++...
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~  153 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRV  153 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHh
Confidence            11223466788999999999988743    33 489999996543210         01145689999999999987643


Q ss_pred             HhhcCCCeEEEEecc
Q psy6113         242 EEFKGDNIAVNALWP  256 (406)
Q Consensus       242 ~e~~~~gI~vn~v~P  256 (406)
                      .+. ..++++..+.|
T Consensus       154 ~~~-~~~~~~~~lR~  167 (314)
T TIGR02197       154 LPE-ALSAQVVGLRY  167 (314)
T ss_pred             Hhh-ccCCceEEEEE
Confidence            221 12344544444

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.36  E-value=1.2e-11  Score=117.73  Aligned_cols=208  Identities=19%  Similarity=0.202  Sum_probs=139.4

Q ss_pred             EEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          13 FITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        13 lVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      |||||+|-||..++++|+++|  ++|.+.++......         ....... ....++.+|++|.+++.++++     
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~---------~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-----   65 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF---------LKDLQKS-GVKEYIQGDITDPESLEEALE-----   65 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc---------chhhhcc-cceeEEEeccccHHHHHHHhc-----
Confidence            699999999999999999999  68888888765421         1111222 223389999999999988776     


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        +.|++||.|+......                                                              
T Consensus        66 --g~d~V~H~Aa~~~~~~--------------------------------------------------------------   81 (280)
T PF01073_consen   66 --GVDVVFHTAAPVPPWG--------------------------------------------------------------   81 (280)
T ss_pred             --CCceEEEeCccccccC--------------------------------------------------------------
Confidence              5799999999754321                                                              


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------------cCCchhhhHhhHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------------FKNHVAYTISKYGMSM  235 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------------~~~~~~Y~asKaal~~  235 (406)
                        ....+.++++|+.|+-++++++.    +.+-.++|++||.+...+..               ......|+.||+.-+.
T Consensus        82 --~~~~~~~~~vNV~GT~nvl~aa~----~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~  155 (280)
T PF01073_consen   82 --DYPPEEYYKVNVDGTRNVLEAAR----KAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEK  155 (280)
T ss_pred             --cccHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHH
Confidence              23356788999999999999884    44567999999987654410               0134489999999999


Q ss_pred             HHHHHHH-hhc-CCCeEEEEecchhhhhH-------HHHHHhcCCC-------cccccccCChhhHHHHHHHhhc---CC
Q psy6113         236 CALGMAE-EFK-GDNIAVNALWPRTAIYT-------AAIEMLTGGS-------ADAKATSRKPEIMADAAYYILS---SN  296 (406)
Q Consensus       236 l~~~la~-e~~-~~gI~vn~v~PG~~~~t-------~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s---~~  296 (406)
                      ++..... ++. ...++..+|.|..+.-.       .+.+......       ......+...+++|.+.+-.+.   +.
T Consensus       156 ~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~  235 (280)
T PF01073_consen  156 AVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEP  235 (280)
T ss_pred             HHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccc
Confidence            8877655 222 12488888999632211       1111111110       0011224468999998865442   22


Q ss_pred             --CCCccceEE
Q psy6113         297 --PPSLTGQFL  305 (406)
Q Consensus       297 --~~~~tG~~i  305 (406)
                        ...+.|+.+
T Consensus       236 ~~~~~~~G~~y  246 (280)
T PF01073_consen  236 GKPERVAGQAY  246 (280)
T ss_pred             cccccCCCcEE
Confidence              456888866

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.34  E-value=1e-11  Score=119.65  Aligned_cols=156  Identities=17%  Similarity=0.145  Sum_probs=105.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH--
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD--   89 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~--   89 (406)
                      ++||||+|.||+.++++|+++|++++++.|+......        .         .....+|++|..+.+.+++.+.+  
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~--------~---------~~~~~~~~~d~~~~~~~~~~~~~~~   64 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--------F---------VNLVDLDIADYMDKEDFLAQIMAGD   64 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH--------H---------HhhhhhhhhhhhhHHHHHHHHhccc
Confidence            7999999999999999999999977776665433110        0         01234577777666666666543  


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|++||+||.....                                                              
T Consensus        65 ~~~~~d~Vih~A~~~~~~--------------------------------------------------------------   82 (308)
T PRK11150         65 DFGDIEAIFHEGACSSTT--------------------------------------------------------------   82 (308)
T ss_pred             ccCCccEEEECceecCCc--------------------------------------------------------------
Confidence            346799999999854321                                                              


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~l  240 (406)
                      ....   ...++.|+.++.++++++    ++.+ .++|++||...+...         +..+...|+.||.+.+.+.+.+
T Consensus        83 ~~~~---~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  154 (308)
T PRK11150         83 EWDG---KYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQI  154 (308)
T ss_pred             CCCh---HHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            1111   346789999999998887    3444 479999997533211         0123467999999999988887


Q ss_pred             HHhhcCCCeEEEEecch
Q psy6113         241 AEEFKGDNIAVNALWPR  257 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG  257 (406)
                      +.+.   ++.+..+.|+
T Consensus       155 ~~~~---~~~~~~lR~~  168 (308)
T PRK11150        155 LPEA---NSQICGFRYF  168 (308)
T ss_pred             HHHc---CCCEEEEeee
Confidence            6553   5666666654

>COG3255 Putative sterol carrier protein [Lipid metabolism]

Probab=99.34  E-value=1.8e-12  Score=107.97  Aligned_cols=70  Identities=37%  Similarity=0.503  Sum_probs=61.1

Q ss_pred             cceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhh
Q psy6113         331 GSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL  402 (406)
Q Consensus       331 g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~  402 (406)
                      ....+.+..++++..+++ + +||+|+.+|.++|.+|.+|++||++|||+||||++|+|+.||+++..+...
T Consensus        52 ~~~~~~i~~~~v~~~d~~-~-~~d~~l~as~~~w~~i~~G~l~p~~AfmtGklkveg~~~~a~~l~~~~~~~  121 (134)
T COG3255          52 CLGVEVIDGGTVSKADAP-D-PPDFTLGASLDNWLDIITGKLNPTSAFMTGKLKVEGGMLSAMKLRYVIAAF  121 (134)
T ss_pred             CceEEEEcCceEEeccCC-C-CCCeEEEeCHHHHHHHHcCCcchhhHhhcCceEEeccccHHHHHHHHHHHH
Confidence            456677777777767653 4 789999999999999999999999999999999999999999999988754

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.34  E-value=4.9e-11  Score=117.03  Aligned_cols=206  Identities=14%  Similarity=0.100  Sum_probs=130.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCC-ChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIR-DEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~-~~~~v~~~~~~i   87 (406)
                      ++++||||+|-||..++++|+++ |++|+.++|+.+..           ..+.. ...+.++.+|++ +.+.+.++++  
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~-----------~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~--   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL-----------GDLVN-HPRMHFFEGDITINKEWIEYHVK--   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH-----------HHhcc-CCCeEEEeCCCCCCHHHHHHHHc--
Confidence            46999999999999999999987 69999998865321           11111 235788899998 5665544332  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++||+|+...+...                                                          
T Consensus        68 -----~~d~ViH~aa~~~~~~~----------------------------------------------------------   84 (347)
T PRK11908         68 -----KCDVILPLVAIATPATY----------------------------------------------------------   84 (347)
T ss_pred             -----CCCEEEECcccCChHHh----------------------------------------------------------
Confidence                 58999999996432111                                                          


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---c-------------CCchhhhHhhH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---F-------------KNHVAYTISKY  231 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---~-------------~~~~~Y~asKa  231 (406)
                           .++-...+++|+.+..++++++.    +.+ .++|++||...+....   +             .....|+.||.
T Consensus        85 -----~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         85 -----VKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             -----hcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence                 11224567889999999888774    334 6999999975332100   0             11236999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEecchhhhh-----------------HHHHHHh-cCCC------cccccccCChhhHHH
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALWPRTAIY-----------------TAAIEML-TGGS------ADAKATSRKPEIMAD  287 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~PG~~~~-----------------t~~~~~~-~~~~------~~~~~~~~~pe~vA~  287 (406)
                      +.+.+.+.++.+.   |+.+..+.|+.+..                 ..+...+ ....      ......+...+|+++
T Consensus       155 ~~e~~~~~~~~~~---~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~  231 (347)
T PRK11908        155 LMDRVIWAYGMEE---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGID  231 (347)
T ss_pred             HHHHHHHHHHHHc---CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHH
Confidence            9999988887653   55555565532111                 0111111 1111      011234678999999


Q ss_pred             HHHHhhcCCCCCccceEE
Q psy6113         288 AAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       288 ~v~~L~s~~~~~~tG~~i  305 (406)
                      +++.++........|+.+
T Consensus       232 a~~~~~~~~~~~~~g~~y  249 (347)
T PRK11908        232 ALMKIIENKDGVASGKIY  249 (347)
T ss_pred             HHHHHHhCccccCCCCeE
Confidence            999988653322335444

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.33  E-value=5.6e-11  Score=126.33  Aligned_cols=208  Identities=13%  Similarity=0.104  Sum_probs=134.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHH-HHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHA-VQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~-v~~~~~   85 (406)
                      ++++++||||+|-||..++++|+++ |++|+.++|......           ... ...++.++.+|++|..+ +++++ 
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~-----------~~~-~~~~~~~~~gDl~d~~~~l~~~l-  380 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAIS-----------RFL-GHPRFHFVEGDISIHSEWIEYHI-  380 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhh-----------hhc-CCCceEEEeccccCcHHHHHHHh-
Confidence            4788999999999999999999986 799999998764311           011 12357788899998665 33332 


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                            .++|++||.|+...+...                                                        
T Consensus       381 ------~~~D~ViHlAa~~~~~~~--------------------------------------------------------  398 (660)
T PRK08125        381 ------KKCDVVLPLVAIATPIEY--------------------------------------------------------  398 (660)
T ss_pred             ------cCCCEEEECccccCchhh--------------------------------------------------------
Confidence                  258999999997543211                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---c----c---------CCchhhhHh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---W----F---------KNHVAYTIS  229 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---~----~---------~~~~~Y~as  229 (406)
                             .++....+++|+.++..+.+++..    .+ .++|++||...+...   +    .         .....|+.|
T Consensus       399 -------~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~s  466 (660)
T PRK08125        399 -------TRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVS  466 (660)
T ss_pred             -------ccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHH
Confidence                   112245678999999999988753    33 589999996433210   0    0         112369999


Q ss_pred             hHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH-----------------HHHHHhc-CCCc------ccccccCChhhH
Q psy6113         230 KYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT-----------------AAIEMLT-GGSA------DAKATSRKPEIM  285 (406)
Q Consensus       230 Kaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t-----------------~~~~~~~-~~~~------~~~~~~~~pe~v  285 (406)
                      |.+.+.+++.+++++   |+++..+.|+.+..+                 .+..... ....      .....+...+|+
T Consensus       467 K~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dv  543 (660)
T PRK08125        467 KQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDG  543 (660)
T ss_pred             HHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHH
Confidence            999999999887664   577777777532211                 1111111 1110      111235578999


Q ss_pred             HHHHHHhhcCCCCCccceEE
Q psy6113         286 ADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       286 A~~v~~L~s~~~~~~tG~~i  305 (406)
                      +++++.++........|+.+
T Consensus       544 a~a~~~~l~~~~~~~~g~iy  563 (660)
T PRK08125        544 IEALFRIIENKDNRCDGQII  563 (660)
T ss_pred             HHHHHHHHhccccccCCeEE
Confidence            99998887643222345544

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.32  E-value=1.1e-10  Score=111.07  Aligned_cols=186  Identities=15%  Similarity=0.148  Sum_probs=123.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++||||+|.||.+++++|.++|++|++++|+                            .+|+.+.++++++++..    
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------~~d~~~~~~~~~~~~~~----   49 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------QLDLTDPEALERLLRAI----   49 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------ccCCCCHHHHHHHHHhC----
Confidence            7999999999999999999999999998774                            25889999888887652    


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                       .+|++||+||.....                                                               .
T Consensus        50 -~~d~vi~~a~~~~~~---------------------------------------------------------------~   65 (287)
T TIGR01214        50 -RPDAVVNTAAYTDVD---------------------------------------------------------------G   65 (287)
T ss_pred             -CCCEEEECCcccccc---------------------------------------------------------------c
Confidence             589999999964321                                                               1


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---c------cCCchhhhHhhHHHHHHHHHHHH
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---W------FKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---~------~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      ........+++|+.++..+.+++.    +.+ .++|++||...+.+.   +      ..+...|+.+|.+.+.+++.+  
T Consensus        66 ~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~--  138 (287)
T TIGR01214        66 AESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA--  138 (287)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh--
Confidence            112345677899999999988873    333 489999996433210   0      113467999999988887765  


Q ss_pred             hhcCCCeEEEEecchhhhhH--------HHHHHhcCCCcc-----cccccCChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         243 EFKGDNIAVNALWPRTAIYT--------AAIEMLTGGSAD-----AKATSRKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t--------~~~~~~~~~~~~-----~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                           +.++..+.|+.+...        .+..........     ....+...+|+|+++..++... ...+|.+.+
T Consensus       139 -----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~~~~~~ni  209 (287)
T TIGR01214       139 -----GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRL-ARARGVYHL  209 (287)
T ss_pred             -----CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhc-cCCCCeEEE
Confidence                 345666777643211        112222211110     0112345799999999988542 234555543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.31  E-value=6.1e-11  Score=117.48  Aligned_cols=199  Identities=15%  Similarity=0.088  Sum_probs=129.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++++||||+|-||++++++|.++|++|++++|.......             .......++.+|+++.+.+..+++  
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~-------------~~~~~~~~~~~Dl~d~~~~~~~~~--   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS-------------EDMFCHEFHLVDLRVMENCLKVTK--   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc-------------cccccceEEECCCCCHHHHHHHHh--
Confidence            57899999999999999999999999999999986432110             001124567889999887665543  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++||.|+........                                                         
T Consensus        85 -----~~D~Vih~Aa~~~~~~~~---------------------------------------------------------  102 (370)
T PLN02695         85 -----GVDHVFNLAADMGGMGFI---------------------------------------------------------  102 (370)
T ss_pred             -----CCCEEEEcccccCCcccc---------------------------------------------------------
Confidence                 579999999854321111                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC---------C------ccCCchhhhHhhHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP---------F------WFKNHVAYTISKYG  232 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~---------~------~~~~~~~Y~asKaa  232 (406)
                        .   .+....+..|+.++.++++++    ++.+-.++|++||...+..         .      +..+...|+.+|.+
T Consensus       103 --~---~~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695        103 --Q---SNHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             --c---cCchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence              0   112334567999999988877    3444569999999642210         0      12345689999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhhhhH-------------HHHHH-hcCCCc-------ccccccCChhhHHHHHHH
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTAIYT-------------AAIEM-LTGGSA-------DAKATSRKPEIMADAAYY  291 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~~~t-------------~~~~~-~~~~~~-------~~~~~~~~pe~vA~~v~~  291 (406)
                      .+.+.+..+..+   |+++..+.|+.+...             .+... ......       .....+...+|+++++++
T Consensus       174 ~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~  250 (370)
T PLN02695        174 TEELCKHYTKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR  250 (370)
T ss_pred             HHHHHHHHHHHh---CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHH
Confidence            999988876653   677777777532211             11111 111110       011234578999999988


Q ss_pred             hhcC
Q psy6113         292 ILSS  295 (406)
Q Consensus       292 L~s~  295 (406)
                      ++..
T Consensus       251 ~~~~  254 (370)
T PLN02695        251 LTKS  254 (370)
T ss_pred             HHhc
Confidence            7754

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.29  E-value=2.8e-10  Score=110.28  Aligned_cols=182  Identities=10%  Similarity=0.065  Sum_probs=121.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|-||+.++++|+++|++|++++|+.++.           ..+..  ..+.++.+|++|++++.++++     
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-----------~~l~~--~~v~~v~~Dl~d~~~l~~al~-----   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-----------SFLKE--WGAELVYGDLSLPETLPPSFK-----   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-----------hhHhh--cCCEEEECCCCCHHHHHHHHC-----
Confidence            589999999999999999999999999999986431           11122  247788999999988766554     


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||+++....                                                                
T Consensus        64 --g~d~Vi~~~~~~~~----------------------------------------------------------------   77 (317)
T CHL00194         64 --GVTAIIDASTSRPS----------------------------------------------------------------   77 (317)
T ss_pred             --CCCEEEECCCCCCC----------------------------------------------------------------
Confidence              58999998763210                                                                


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeE
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA  250 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~  250 (406)
                          +.....++|+.++.++.+++    ++.+-.++|++||..+..    .+...|..+|...+.+.+       ..++.
T Consensus        78 ----~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~----~~~~~~~~~K~~~e~~l~-------~~~l~  138 (317)
T CHL00194         78 ----DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ----YPYIPLMKLKSDIEQKLK-------KSGIP  138 (317)
T ss_pred             ----CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc----cCCChHHHHHHHHHHHHH-------HcCCC
Confidence                01124457888888887776    455556999999864431    123568888988766543       34788


Q ss_pred             EEEecchhhhhHHHHHHhcC---CCc------ccccccCChhhHHHHHHHhhcC
Q psy6113         251 VNALWPRTAIYTAAIEMLTG---GSA------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       251 vn~v~PG~~~~t~~~~~~~~---~~~------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ...+.|+.+..........+   ...      .....+...+|+|++++.++..
T Consensus       139 ~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  192 (317)
T CHL00194        139 YTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSL  192 (317)
T ss_pred             eEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcC
Confidence            88899975432211111111   000      0011234669999999888764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.28  E-value=1e-10  Score=124.76  Aligned_cols=207  Identities=17%  Similarity=0.160  Sum_probs=134.2

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++|+++||||+|.||+.++++|+++  |++|+..+|.... ..    +.....  .....++.++.+|++|.+.+..++
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~----~~~l~~--~~~~~~v~~~~~Dl~d~~~~~~~~   76 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SN----LKNLNP--SKSSPNFKFVKGDIASADLVNYLL   76 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-ch----hhhhhh--cccCCCeEEEECCCCChHHHHHHH
Confidence            46789999999999999999999998  5789888875311 10    001110  012346888999999998876654


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ..     .++|++||+|+......                                                        
T Consensus        77 ~~-----~~~D~ViHlAa~~~~~~--------------------------------------------------------   95 (668)
T PLN02260         77 IT-----EGIDTIMHFAAQTHVDN--------------------------------------------------------   95 (668)
T ss_pred             hh-----cCCCEEEECCCccCchh--------------------------------------------------------
Confidence            32     37999999999653211                                                        


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCC------------ccCCchhhhHhhH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPF------------WFKNHVAYTISKY  231 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~------------~~~~~~~Y~asKa  231 (406)
                             ...+....+++|+.++..+++++    ++.+ -.++|++||...+...            +..+...|+.||.
T Consensus        96 -------~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~  164 (668)
T PLN02260         96 -------SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKA  164 (668)
T ss_pred             -------hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHH
Confidence                   11223456789999999998877    3333 4699999996433211            0113457999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEecchhhhhH---------HHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYT---------AAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +.+.+.+.++.++   ++.+..+.|+.+...         .+.........       .....+...+|+|+++..++..
T Consensus       165 ~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~  241 (668)
T PLN02260        165 GAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK  241 (668)
T ss_pred             HHHHHHHHHHHHc---CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc
Confidence            9999998877664   677777777532211         11111111110       0112345789999999888753

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.26  E-value=1.8e-10  Score=106.47  Aligned_cols=215  Identities=17%  Similarity=0.121  Sum_probs=140.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +.+|||||.|-||.++++.+.++.-  +|+.++.-.-...     .+.. ..+. ...+..+++.|++|.+.+.+++++-
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn-----~~~l-~~~~-~~~~~~fv~~DI~D~~~v~~~~~~~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGN-----LENL-ADVE-DSPRYRFVQGDICDRELVDRLFKEY   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCC-----HHHH-Hhhh-cCCCceEEeccccCHHHHHHHHHhc
Confidence            4689999999999999999998864  4677665332211     1111 1121 2358999999999999988888754


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           .+|+++|-|+-...                                                             
T Consensus        74 -----~~D~VvhfAAESHV-------------------------------------------------------------   87 (340)
T COG1088          74 -----QPDAVVHFAAESHV-------------------------------------------------------------   87 (340)
T ss_pred             -----CCCeEEEechhccc-------------------------------------------------------------
Confidence                 69999999985432                                                             


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC-----------CccCCchhhhHhhHHHHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP-----------FWFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~-----------~~~~~~~~Y~asKaal~~l  236 (406)
                        +-+..+-...+++|+.|++.+++++..+..+   -+++.||.-.-+..           .+..+.++|+|||||-.+|
T Consensus        88 --DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~l  162 (340)
T COG1088          88 --DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLL  162 (340)
T ss_pred             --cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHH
Confidence              3344445567899999999999999655432   37888887432111           1234678999999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecch----hh------hhHHHHHHhcCCCcc------cccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         237 ALGMAEEFKGDNIAVNALWPR----TA------IYTAAIEMLTGGSAD------AKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG----~~------~~t~~~~~~~~~~~~------~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      +|+..+.|   |+.+....+.    +-      +--...+.+.+.+..      ....+.-.+|=+.++...+...  .+
T Consensus       163 Vray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg--~~  237 (340)
T COG1088         163 VRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKG--KI  237 (340)
T ss_pred             HHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcC--cC
Confidence            99999987   4555444331    00      001112222222111      1223456899999887777642  23


Q ss_pred             cceEEEeh
Q psy6113         301 TGQFLIDD  308 (406)
Q Consensus       301 tG~~i~d~  308 (406)
                       |++.-.+
T Consensus       238 -GE~YNIg  244 (340)
T COG1088         238 -GETYNIG  244 (340)
T ss_pred             -CceEEeC
Confidence             8877333

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.24  E-value=1.6e-10  Score=111.09  Aligned_cols=157  Identities=16%  Similarity=0.124  Sum_probs=114.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++||||+|-||..++++|.++|++|+.++|........           .   ..+.++.+|+++.+...+.++..    
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~---~~~~~~~~d~~~~~~~~~~~~~~----   64 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL-----------L---SGVEFVVLDLTDRDLVDELAKGV----   64 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccc-----------c---cccceeeecccchHHHHHHHhcC----
Confidence            99999999999999999999999999999987764431           0   45778889999985554444321    


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                      .  |.+||+|+........                                                             
T Consensus        65 ~--d~vih~aa~~~~~~~~-------------------------------------------------------------   81 (314)
T COG0451          65 P--DAVIHLAAQSSVPDSN-------------------------------------------------------------   81 (314)
T ss_pred             C--CEEEEccccCchhhhh-------------------------------------------------------------
Confidence            1  9999999976432211                                                             


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------ccCCchhhhHhhHHHHHHHHHH
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------WFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------~~~~~~~Y~asKaal~~l~~~l  240 (406)
                      .. +....+++|+.++.++.+++..    .+..++|+.||.....+.           +......|+.||...+.+++..
T Consensus        82 ~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~  156 (314)
T COG0451          82 AS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAY  156 (314)
T ss_pred             hh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence            11 3456889999999999999844    555789997775533321           0011125999999999999998


Q ss_pred             HHhhcCCCeEEEEecch
Q psy6113         241 AEEFKGDNIAVNALWPR  257 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG  257 (406)
                      +.   ..|+.+..+.|+
T Consensus       157 ~~---~~~~~~~ilR~~  170 (314)
T COG0451         157 AR---LYGLPVVILRPF  170 (314)
T ss_pred             HH---HhCCCeEEEeee
Confidence            88   346777777765

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.23  E-value=2.7e-10  Score=105.75  Aligned_cols=151  Identities=17%  Similarity=0.113  Sum_probs=114.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      .++|||||.|-||..++++|++.|++|++.+.-.....+       +....+     +.+++.|+.|.+-+++++++-  
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~-------~v~~~~-----~~f~~gDi~D~~~L~~vf~~~--   66 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKI-------ALLKLQ-----FKFYEGDLLDRALLTAVFEEN--   66 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHH-------Hhhhcc-----CceEEeccccHHHHHHHHHhc--
Confidence            368999999999999999999999999999886654322       111111     678999999999999988864  


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         +||.+||-||....                                                               
T Consensus        67 ---~idaViHFAa~~~V---------------------------------------------------------------   80 (329)
T COG1087          67 ---KIDAVVHFAASISV---------------------------------------------------------------   80 (329)
T ss_pred             ---CCCEEEECcccccc---------------------------------------------------------------
Confidence               89999999996543                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------cCCchhhhHhhHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------FKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------~~~~~~Y~asKaal~~l~~~  239 (406)
                      ..+.++-.+.++.|+.|+..+++++    ++.+-..|||-||.+- ++.+          ..+..+|+.||..++.+.+.
T Consensus        81 gESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAav-YG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          81 GESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAV-YGEPTTSPISETSPLAPINPYGRSKLMSEEILRD  155 (329)
T ss_pred             chhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhh-cCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence            2344555678899999999998876    5655567777666443 3321          12345899999999999999


Q ss_pred             HHHhhc
Q psy6113         240 MAEEFK  245 (406)
Q Consensus       240 la~e~~  245 (406)
                      ++....
T Consensus       156 ~~~a~~  161 (329)
T COG1087         156 AAKANP  161 (329)
T ss_pred             HHHhCC
Confidence            988753

>KOG4022|consensus

Probab=99.21  E-value=1.9e-09  Score=91.00  Aligned_cols=216  Identities=11%  Similarity=0.071  Sum_probs=145.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +-+.++|-||-+.+|.+++..|-++++-|.-++..+.....                . -..+..|-+=.++-+.+.+++
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad----------------~-sI~V~~~~swtEQe~~v~~~v   64 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD----------------S-SILVDGNKSWTEQEQSVLEQV   64 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc----------------c-eEEecCCcchhHHHHHHHHHH
Confidence            34678999999999999999999999988887776543211                1 223334444455666677777


Q ss_pred             HHhcC--CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          88 VDKFG--GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        88 ~~~~g--~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      -+..+  ++|.+++-||.+........                                                     
T Consensus        65 g~sL~gekvDav~CVAGGWAGGnAksK-----------------------------------------------------   91 (236)
T KOG4022|consen   65 GSSLQGEKVDAVFCVAGGWAGGNAKSK-----------------------------------------------------   91 (236)
T ss_pred             HHhhcccccceEEEeeccccCCCcchh-----------------------------------------------------
Confidence            66653  79999999997654332100                                                     


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                           .-...-+.++.-.+...-.-.+.+-.|++..  |-+-..+.-.+..+  .|+...|+++|+|+++++++|+.+-.
T Consensus        92 -----dl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G--GLL~LtGAkaAl~g--TPgMIGYGMAKaAVHqLt~SLaak~S  162 (236)
T KOG4022|consen   92 -----DLVKNADLMWKQSVWTSAISAKLATTHLKPG--GLLQLTGAKAALGG--TPGMIGYGMAKAAVHQLTSSLAAKDS  162 (236)
T ss_pred             -----hhhhchhhHHHHHHHHHHHHHHHHHhccCCC--ceeeecccccccCC--CCcccchhHHHHHHHHHHHHhccccc
Confidence                 0001122333334444444444455555543  45555555566655  68999999999999999999998743


Q ss_pred             --CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         246 --GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       246 --~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                        +.|-.+.+|.|= ..+|+|.+.+.+.  .....+...+.+++..+-+..+.++--+|..+
T Consensus       163 GlP~gsaa~~ilPV-TLDTPMNRKwMP~--ADfssWTPL~fi~e~flkWtt~~~RPssGsLl  221 (236)
T KOG4022|consen  163 GLPDGSAALTILPV-TLDTPMNRKWMPN--ADFSSWTPLSFISEHFLKWTTETSRPSSGSLL  221 (236)
T ss_pred             CCCCCceeEEEeee-eccCccccccCCC--CcccCcccHHHHHHHHHHHhccCCCCCCCceE
Confidence              567788889997 4788887776655  34455566789999999888877777788766

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.21  E-value=2.7e-10  Score=115.13  Aligned_cols=199  Identities=12%  Similarity=0.054  Sum_probs=126.2

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +.++++++||||+|-||+.++++|+++|++|++++|......+      ......  ...++.++..|+.+..-      
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~------~~~~~~--~~~~~~~i~~D~~~~~l------  181 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE------NVMHHF--SNPNFELIRHDVVEPIL------  181 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh------hhhhhc--cCCceEEEECCccChhh------
Confidence            3467899999999999999999999999999998875432111      111111  12356777888866521      


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                            .++|+|||.|+...+...                                                        
T Consensus       182 ------~~~D~ViHlAa~~~~~~~--------------------------------------------------------  199 (442)
T PLN02206        182 ------LEVDQIYHLACPASPVHY--------------------------------------------------------  199 (442)
T ss_pred             ------cCCCEEEEeeeecchhhh--------------------------------------------------------
Confidence                  258999999986532110                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------ccCCchhhhHhhH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------WFKNHVAYTISKY  231 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------~~~~~~~Y~asKa  231 (406)
                          .   .+....+++|+.++.++.+++.    +.+ .++|++||...+...              +......|+.||.
T Consensus       200 ----~---~~p~~~~~~Nv~gt~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~  267 (442)
T PLN02206        200 ----K---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR  267 (442)
T ss_pred             ----h---cCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHH
Confidence                1   1234678899999999998873    334 489999997543210              1112467999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEecchhh------------hhHHHHHHhcCCCcc------cccccCChhhHHHHHHHhh
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALWPRTA------------IYTAAIEMLTGGSAD------AKATSRKPEIMADAAYYIL  293 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~PG~~------------~~t~~~~~~~~~~~~------~~~~~~~pe~vA~~v~~L~  293 (406)
                      +.+.+++.+.+.+   ++++..+.|+.+            +...+..........      ....+...+|+|++++.++
T Consensus       268 ~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        268 TAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            9998888776553   566665554311            111111222211111      1123467899999998887


Q ss_pred             cC
Q psy6113         294 SS  295 (406)
Q Consensus       294 s~  295 (406)
                      ..
T Consensus       345 e~  346 (442)
T PLN02206        345 EG  346 (442)
T ss_pred             hc
Confidence            53

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.20  E-value=2e-10  Score=110.36  Aligned_cols=182  Identities=13%  Similarity=0.091  Sum_probs=120.7

Q ss_pred             EEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcC
Q psy6113          13 FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFG   92 (406)
Q Consensus        13 lVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g   92 (406)
                      +||||+|.||..+++.|+++|++|+++.+.                           ..+|+++.++++++++..     
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------------~~~Dl~~~~~l~~~~~~~-----   48 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------------KELDLTRQADVEAFFAKE-----   48 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------------ccCCCCCHHHHHHHHhcc-----
Confidence            699999999999999999999988765322                           136999999888876652     


Q ss_pred             CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCc
Q psy6113          93 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTP  172 (406)
Q Consensus        93 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~  172 (406)
                      ++|++||+|+......                                                              ..
T Consensus        49 ~~d~Vih~A~~~~~~~--------------------------------------------------------------~~   66 (306)
T PLN02725         49 KPTYVILAAAKVGGIH--------------------------------------------------------------AN   66 (306)
T ss_pred             CCCEEEEeeeeecccc--------------------------------------------------------------hh
Confidence            5899999999643111                                                              01


Q ss_pred             hhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-------------cc-CCchhhhHhhHHHHHHHH
Q psy6113         173 LKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-------------WF-KNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       173 ~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-------------~~-~~~~~Y~asKaal~~l~~  238 (406)
                      .++....+++|+.++..+++++    ++.+-.++|++||..-+.+.             +. +....|+.||.+.+.+.+
T Consensus        67 ~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~  142 (306)
T PLN02725         67 MTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQ  142 (306)
T ss_pred             hhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHH
Confidence            1122346778999999988887    44445689999996533211             00 112359999999998888


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhH-------------HHHHHh-----cCCC-------cccccccCChhhHHHHHHHhh
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYT-------------AAIEML-----TGGS-------ADAKATSRKPEIMADAAYYIL  293 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t-------------~~~~~~-----~~~~-------~~~~~~~~~pe~vA~~v~~L~  293 (406)
                      .+..++   ++++..+.|+.+...             .+...+     ....       ......+...+|++++++.++
T Consensus       143 ~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~  219 (306)
T PLN02725        143 AYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLM  219 (306)
T ss_pred             HHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHH
Confidence            776654   677777777532111             111110     0110       111234578899999999988


Q ss_pred             cC
Q psy6113         294 SS  295 (406)
Q Consensus       294 s~  295 (406)
                      ..
T Consensus       220 ~~  221 (306)
T PLN02725        220 RR  221 (306)
T ss_pred             hc
Confidence            64

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.20  E-value=2.3e-10  Score=109.99  Aligned_cols=145  Identities=13%  Similarity=0.130  Sum_probs=102.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      ++|||||+|-||++++++|+++| +|+.++|...                        .+..|++|.++++++++..   
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------------~~~~Dl~d~~~~~~~~~~~---   53 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------------DYCGDFSNPEGVAETVRKI---   53 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------------cccCCCCCHHHHHHHHHhc---
Confidence            59999999999999999999999 7888877532                        1346999999988877742   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||+|+......                                                              
T Consensus        54 --~~D~Vih~Aa~~~~~~--------------------------------------------------------------   69 (299)
T PRK09987         54 --RPDVIVNAAAHTAVDK--------------------------------------------------------------   69 (299)
T ss_pred             --CCCEEEECCccCCcch--------------------------------------------------------------
Confidence              5899999999753211                                                              


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~la  241 (406)
                       ..++-...+++|+.++.++.+++.    +.+ .++|++||...+.+.         +..+...|+.||.+.+.+++...
T Consensus        70 -~~~~~~~~~~~N~~~~~~l~~aa~----~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~  143 (299)
T PRK09987         70 -AESEPEFAQLLNATSVEAIAKAAN----EVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHC  143 (299)
T ss_pred             -hhcCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence             112234566889999999998873    333 589999995432110         11234579999999999887654


Q ss_pred             HhhcCCCeEEEEec
Q psy6113         242 EEFKGDNIAVNALW  255 (406)
Q Consensus       242 ~e~~~~gI~vn~v~  255 (406)
                      .++  .-+|...|.
T Consensus       144 ~~~--~ilR~~~vy  155 (299)
T PRK09987        144 AKH--LIFRTSWVY  155 (299)
T ss_pred             CCE--EEEecceec
Confidence            432  235655554

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.18  E-value=8.8e-10  Score=104.00  Aligned_cols=193  Identities=15%  Similarity=0.146  Sum_probs=141.5

Q ss_pred             CcEEEEecC-CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGA-SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGa-s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .++|+|.|. ..-|++.+|..|-++|+-|+++..+.+.           .+.++.. ...+.....|..++.++...+.+
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed-----------~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~   71 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAED-----------EKYVESEDRPDIRPLWLDDSDPSSIHASLSR   71 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHH-----------HHHHHhccCCCCCCcccCCCCCcchHHHHHH
Confidence            468899995 7999999999999999999999888664           2222222 34577777888888888888888


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      ..+.......=+.++-     +.            ..++.+                           +++-..-.++..
T Consensus        72 f~~~L~~p~~p~~~~~-----~h------------~l~L~s---------------------------vi~~Psl~yp~g  107 (299)
T PF08643_consen   72 FASLLSRPHVPFPGAP-----PH------------HLQLKS---------------------------VIFIPSLSYPTG  107 (299)
T ss_pred             HHHHhcCCCCCCCCCC-----Cc------------eeEEEE---------------------------EEEecCCCCCCC
Confidence            8776654322111110     00            001111                           112222234778


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHh---cCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK---SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                      |++.++.+.|...++.|+..++.+++.++|+|+.   ++..-|++.-|..+...  .|.++.-.+...++.+|+.+|.+|
T Consensus       108 Pie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~--~PfhspE~~~~~al~~~~~~LrrE  185 (299)
T PF08643_consen  108 PIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN--PPFHSPESIVSSALSSFFTSLRRE  185 (299)
T ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC--CCccCHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999999999999999999999998   44344444546544433  377888999999999999999999


Q ss_pred             hcCCCeEEEEecchh
Q psy6113         244 FKGDNIAVNALWPRT  258 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~  258 (406)
                      ++++||.|..|..|.
T Consensus       186 l~~~~I~V~~i~LG~  200 (299)
T PF08643_consen  186 LRPHNIDVTQIKLGN  200 (299)
T ss_pred             hhhcCCceEEEEeee
Confidence            999999999999984

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1371|consensus

Probab=99.15  E-value=3.5e-10  Score=106.00  Aligned_cols=161  Identities=15%  Similarity=0.150  Sum_probs=120.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      ++++|||||.|-||.+.+.+|.++|+.|+++|.-......   .+.+ .+++...+..+.+++.|++|.+.++++++.. 
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~---sl~r-~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLE---SLKR-VRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchh---HHHH-HHHhcCCCCceEEEEeccCCHHHHHHHHhhc-
Confidence            6889999999999999999999999999999765443211   1222 2233333678999999999999999998876 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|.++|-|+.....                                                             
T Consensus        77 ----~fd~V~Hfa~~~~vg-------------------------------------------------------------   91 (343)
T KOG1371|consen   77 ----KFDAVMHFAALAAVG-------------------------------------------------------------   91 (343)
T ss_pred             ----CCceEEeehhhhccc-------------------------------------------------------------
Confidence                599999999975432                                                             


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccC-CchhhhHhhHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFK-NHVAYTISKYGMSMCAL  238 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~-~~~~Y~asKaal~~l~~  238 (406)
                        .+.++-....+.|+.|+..++..+    ++.+-..+|+.||..-+...         +.. +...|+.+|.+++...+
T Consensus        92 --eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~  165 (343)
T KOG1371|consen   92 --ESMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH  165 (343)
T ss_pred             --hhhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence              233444678889999999987765    55556788888886533211         011 45789999999999999


Q ss_pred             HHHHhhc
Q psy6113         239 GMAEEFK  245 (406)
Q Consensus       239 ~la~e~~  245 (406)
                      ....-+.
T Consensus       166 d~~~~~~  172 (343)
T KOG1371|consen  166 DYNKAYG  172 (343)
T ss_pred             hhhcccc
Confidence            8877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.14  E-value=4.5e-10  Score=99.67  Aligned_cols=174  Identities=14%  Similarity=0.117  Sum_probs=118.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++|+||+|.+|+.++++|+++|++|+++.|++++.           ++    ..++.++.+|+.|++++.+.+.      
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~-----------~~----~~~~~~~~~d~~d~~~~~~al~------   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKA-----------ED----SPGVEIIQGDLFDPDSVKAALK------   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGH-----------HH----CTTEEEEESCTTCHHHHHHHHT------
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhc-----------cc----ccccccceeeehhhhhhhhhhh------
Confidence            68999999999999999999999999999997741           11    5679999999999987766555      


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                       +.|++|+++|...                                                                . 
T Consensus        60 -~~d~vi~~~~~~~----------------------------------------------------------------~-   73 (183)
T PF13460_consen   60 -GADAVIHAAGPPP----------------------------------------------------------------K-   73 (183)
T ss_dssp             -TSSEEEECCHSTT----------------------------------------------------------------T-
T ss_pred             -hcchhhhhhhhhc----------------------------------------------------------------c-
Confidence             6899999997421                                                                1 


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc-------CCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF-------KNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~-------~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                        +             ...++.++..+++.+-.++|.+||.........       +....|...|...+.+.       
T Consensus        74 --~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------  131 (183)
T PF13460_consen   74 --D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL-------  131 (183)
T ss_dssp             --H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH-------
T ss_pred             --c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH-------
Confidence              0             334555666667777789999999876554211       11235666665544333       


Q ss_pred             cCCCeEEEEecchhhhhHHHHH-HhcCCCcccccccCChhhHHHHHHHhhc
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIE-MLTGGSADAKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~-~~~~~~~~~~~~~~~pe~vA~~v~~L~s  294 (406)
                      ...+++...+.|+++....... .+............+.+|+|.+++.++.
T Consensus       132 ~~~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  132 RESGLNWTIVRPGWIYGNPSRSYRLIKEGGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHSTSEEEEEEESEEEBTTSSSEEEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HhcCCCEEEEECcEeEeCCCcceeEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence            2348999999999754442000 0000011112345678999999988764

...

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.11  E-value=2.3e-10  Score=105.27  Aligned_cols=82  Identities=15%  Similarity=0.129  Sum_probs=62.9

Q ss_pred             cEEEEecC-CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGA-SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGa-s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .+=.||.. +||||+++|++|+++|++|+++++... ..              ..    ....+|+++.++++++++.+.
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~--------------~~----~~~~~Dv~d~~s~~~l~~~v~   75 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK--------------PE----PHPNLSIREIETTKDLLITLK   75 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc--------------cc----cCCcceeecHHHHHHHHHHHH
Confidence            44455544 679999999999999999999876321 10              00    024589999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTA  110 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~  110 (406)
                      +.++++|+||||||+....+..
T Consensus        76 ~~~g~iDiLVnnAgv~d~~~~~   97 (227)
T TIGR02114        76 ELVQEHDILIHSMAVSDYTPVY   97 (227)
T ss_pred             HHcCCCCEEEECCEeccccchh
Confidence            9999999999999986544433

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.10  E-value=1.4e-09  Score=110.66  Aligned_cols=95  Identities=11%  Similarity=0.175  Sum_probs=78.2

Q ss_pred             HHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHH
Q psy6113         186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAI  265 (406)
Q Consensus       186 g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~  265 (406)
                      +.+.+++.+++.|..  .|+||+++|.....+     ...|+++|+++.+++|+++.|+ +++|++|+|.|+.       
T Consensus       101 ~~~~~~~~~l~~l~~--~griv~i~s~~~~~~-----~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~-------  165 (450)
T PRK08261        101 ALYEFFHPVLRSLAP--CGRVVVLGRPPEAAA-----DPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP-------  165 (450)
T ss_pred             HHHHHHHHHHHhccC--CCEEEEEccccccCC-----chHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC-------
Confidence            445667777887764  479999999876532     3469999999999999999999 7899999999972       


Q ss_pred             HHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         266 EMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       266 ~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                                    ..|++++.++.|++++.+.+++|+.+ ++.+
T Consensus       166 --------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~  196 (450)
T PRK08261        166 --------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGAA  196 (450)
T ss_pred             --------------CCHHHHHHHHHHhcCCccCCccCcEEEecCC
Confidence                          35889999999999998899999988 4443

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.09  E-value=1.7e-09  Score=109.12  Aligned_cols=196  Identities=11%  Similarity=0.030  Sum_probs=123.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +.++++||||+|-||..++++|+++|++|++++|.......      . ...+. ...++.++..|+.+..         
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~------~-~~~~~-~~~~~~~~~~Di~~~~---------  181 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKE------N-LVHLF-GNPRFELIRHDVVEPI---------  181 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHh------H-hhhhc-cCCceEEEECcccccc---------
Confidence            45679999999999999999999999999999886432110      0 11111 1235667778886542         


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                         ..++|+|||.|+.......                                                          
T Consensus       182 ---~~~~D~ViHlAa~~~~~~~----------------------------------------------------------  200 (436)
T PLN02166        182 ---LLEVDQIYHLACPASPVHY----------------------------------------------------------  200 (436)
T ss_pred             ---ccCCCEEEECceeccchhh----------------------------------------------------------
Confidence               1258999999986432111                                                          


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------ccCCchhhhHhhHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------WFKNHVAYTISKYGM  233 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------~~~~~~~Y~asKaal  233 (406)
                        ..   +-...+++|+.++..+++++.    +.+ .++|++||...+...              +......|+.||.+.
T Consensus       201 --~~---~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a  270 (436)
T PLN02166        201 --KY---NPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  270 (436)
T ss_pred             --cc---CHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence              11   224678899999999998874    333 489999997532210              111245699999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhh------------hHHHHHHhcCCCcc------cccccCChhhHHHHHHHhhc
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAI------------YTAAIEMLTGGSAD------AKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~------------~t~~~~~~~~~~~~------~~~~~~~pe~vA~~v~~L~s  294 (406)
                      +.+++..++.+   ++.+..+.|+.+.            ...+..........      ....+...+|+++++..++.
T Consensus       271 E~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        271 ETLAMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             HHHHHHHHHHh---CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence            99988876653   5555555543111            11111222221111      11235678999999988875

>PRK05865 hypothetical protein; Provisional

Probab=99.07  E-value=5.1e-09  Score=112.29  Aligned_cols=162  Identities=20%  Similarity=0.142  Sum_probs=111.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|.||++++++|+++|++|++++|+....                ....+.++.+|++|.+++.++++     
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----------------~~~~v~~v~gDL~D~~~l~~al~-----   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----------------WPSSADFIAADIRDATAVESAMT-----   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----------------cccCceEEEeeCCCHHHHHHHHh-----
Confidence            589999999999999999999999999999874320                01246788999999999887765     


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        .+|++||+|+...                                                                .
T Consensus        61 --~vD~VVHlAa~~~----------------------------------------------------------------~   74 (854)
T PRK05865         61 --GADVVAHCAWVRG----------------------------------------------------------------R   74 (854)
T ss_pred             --CCCEEEECCCccc----------------------------------------------------------------c
Confidence              4899999997421                                                                0


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeE
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA  250 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~  250 (406)
                              .+++|+.++.++++++    ++.+.++||++||..                |.+.+.+.+       .+++.
T Consensus        75 --------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~----------------K~aaE~ll~-------~~gl~  119 (854)
T PRK05865         75 --------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH----------------QPRVEQMLA-------DCGLE  119 (854)
T ss_pred             --------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH----------------HHHHHHHHH-------HcCCC
Confidence                    3467888888776654    556667999999842                777666553       24677


Q ss_pred             EEEecchhhhh---HHHHHHhcCCC------cccccccCChhhHHHHHHHhhc
Q psy6113         251 VNALWPRTAIY---TAAIEMLTGGS------ADAKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       251 vn~v~PG~~~~---t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s  294 (406)
                      +..+.|+.+..   ..+........      ......+...+|+|++++.++.
T Consensus       120 ~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~  172 (854)
T PRK05865        120 WVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALL  172 (854)
T ss_pred             EEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence            77777764221   11222211110      0111235678999999988874

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.03  E-value=3.5e-09  Score=112.69  Aligned_cols=161  Identities=15%  Similarity=0.175  Sum_probs=108.9

Q ss_pred             EEEEecCCchHHHHHHHHHH--HcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCCChHHH--HHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAA--KDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIRDEHAV--QSAVN   85 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La--~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~~~~~v--~~~~~   85 (406)
                      +++||||+|.||+.++++|+  ++|++|++++|+...        ..........+ .++.++..|+++++..  ...++
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~--------~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   73 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL--------SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA   73 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH--------HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH
Confidence            69999999999999999999  589999999996432        01111111122 4688899999985321  11122


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+    .++|++||+||....                                                           
T Consensus        74 ~l----~~~D~Vih~Aa~~~~-----------------------------------------------------------   90 (657)
T PRK07201         74 EL----GDIDHVVHLAAIYDL-----------------------------------------------------------   90 (657)
T ss_pred             Hh----cCCCEEEECceeecC-----------------------------------------------------------
Confidence            22    478999999996421                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc-----------cCCchhhhHhhHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW-----------FKNHVAYTISKYGMS  234 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~-----------~~~~~~Y~asKaal~  234 (406)
                          ..   ......++|+.++..+++++    .+.+..++|++||........           ......|+.||...+
T Consensus        91 ----~~---~~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         91 ----TA---DEEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             ----CC---CHHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence                11   12345678999988888876    444457999999976542110           012356999999998


Q ss_pred             HHHHHHHHhhcCCCeEEEEecchhh
Q psy6113         235 MCALGMAEEFKGDNIAVNALWPRTA  259 (406)
Q Consensus       235 ~l~~~la~e~~~~gI~vn~v~PG~~  259 (406)
                      .+.+.      ..|+++..+.|+.+
T Consensus       160 ~~~~~------~~g~~~~ilRp~~v  178 (657)
T PRK07201        160 KLVRE------ECGLPWRVYRPAVV  178 (657)
T ss_pred             HHHHH------cCCCcEEEEcCCee
Confidence            88753      24788899999754

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.00  E-value=2.4e-08  Score=93.56  Aligned_cols=181  Identities=18%  Similarity=0.192  Sum_probs=125.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      +||||++|-+|.++++.|. .+..|+.++|..                            +|++|++.+.+++.+.    
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------~Ditd~~~v~~~i~~~----   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------LDITDPDAVLEVIRET----   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------ccccChHHHHHHHHhh----
Confidence            8999999999999999999 668888876642                            5999999999999987    


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                       ++|++||+|+......                                                               
T Consensus        50 -~PDvVIn~AAyt~vD~---------------------------------------------------------------   65 (281)
T COG1091          50 -RPDVVINAAAYTAVDK---------------------------------------------------------------   65 (281)
T ss_pred             -CCCEEEECcccccccc---------------------------------------------------------------
Confidence             7999999999765432                                                               


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHHHHHH
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      ...+-+..+.+|..++.++.+++    .+- +..+|++|+-.-+.+..         ..+...|+.||.+-+..++....
T Consensus        66 aE~~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~  140 (281)
T COG1091          66 AESEPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGP  140 (281)
T ss_pred             ccCCHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCC
Confidence            22334678899999999999988    333 36899999864332221         13456899999999988877643


Q ss_pred             hhcCCCeEEEEec---chhhhhHHHHHHhcCCCc----ccccccCChhhHHHHHHHhhcCC
Q psy6113         243 EFKGDNIAVNALW---PRTAIYTAAIEMLTGGSA----DAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       243 e~~~~gI~vn~v~---PG~~~~t~~~~~~~~~~~----~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ..  .=||...|.   ++..+.|+.........-    +........+++|+++..|+...
T Consensus       141 ~~--~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~  199 (281)
T COG1091         141 RH--LILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKE  199 (281)
T ss_pred             CE--EEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence            21  114544443   222344433222222111    11223456799999999988654

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.00  E-value=7.8e-09  Score=96.72  Aligned_cols=169  Identities=14%  Similarity=0.171  Sum_probs=96.3

Q ss_pred             EecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHH------HH-HHcCCeeeeeeecCCChHH-H-HH
Q psy6113          14 ITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAK------EV-EDAGGNCLPCIVDIRDEHA-V-QS   82 (406)
Q Consensus        14 VTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~------~~-~~~g~~~~~~~~Dl~~~~~-v-~~   82 (406)
                      ||||+|-||..+.++|++++.  +|++..|...... ..+.+.+...      .. .....++.++..|++++.- + .+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~-~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQS-ALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHH-HHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccccc-chhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999986  8999999764311 0011111000      00 1236789999999998651 1 11


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ..+.+.   ..+|++||||+......                                                      
T Consensus        80 ~~~~L~---~~v~~IiH~Aa~v~~~~------------------------------------------------------  102 (249)
T PF07993_consen   80 DYQELA---EEVDVIIHCAASVNFNA------------------------------------------------------  102 (249)
T ss_dssp             HHHHHH---HH--EEEE--SS-SBS-------------------------------------------------------
T ss_pred             Hhhccc---cccceeeecchhhhhcc------------------------------------------------------
Confidence            122222   24899999999654321                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCC--CCCCc----------------cCCch
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN--LNPFW----------------FKNHV  224 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~--~~~~~----------------~~~~~  224 (406)
                                  .+....++|+.|+..+++.+.    +.+..+++++||...  .....                .....
T Consensus       103 ------------~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (249)
T PF07993_consen  103 ------------PYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPN  166 (249)
T ss_dssp             ------------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE
T ss_pred             ------------cchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccccCCCCCcccccccccccccchhhccCCc
Confidence                        234467889999999999884    333349999999311  11100                01234


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhh
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA  259 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~  259 (406)
                      .|..||+.-+.+.+..+.+   .|+.+..+.||.+
T Consensus       167 gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i  198 (249)
T PF07993_consen  167 GYEQSKWVAERLLREAAQR---HGLPVTIYRPGII  198 (249)
T ss_dssp             -HHHHHHHHHHHHHHHHHH---H---EEEEEE-EE
T ss_pred             cHHHHHHHHHHHHHHHHhc---CCceEEEEecCcc
Confidence            8999999999998888766   3688999999954

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=98.97  E-value=2e-08  Score=96.59  Aligned_cols=190  Identities=11%  Similarity=0.037  Sum_probs=110.8

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ..+..=..+++|||||+|-||..++++|+++|++|++..+                               |+.+.+.+.
T Consensus         2 ~~~~~~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-------------------------------~~~~~~~v~   50 (298)
T PLN02778          2 NGTAGSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-------------------------------RLENRASLE   50 (298)
T ss_pred             CCCCCCCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-------------------------------ccCCHHHHH
Confidence            4444445678999999999999999999999999875321                               233444444


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ..++.     .++|++||+||.......                                                    
T Consensus        51 ~~l~~-----~~~D~ViH~Aa~~~~~~~----------------------------------------------------   73 (298)
T PLN02778         51 ADIDA-----VKPTHVFNAAGVTGRPNV----------------------------------------------------   73 (298)
T ss_pred             HHHHh-----cCCCEEEECCcccCCCCc----------------------------------------------------
Confidence            44332     268999999997542110                                                    


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCC--CC---C---------C--ccCCchh
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN--LN---P---------F--WFKNHVA  225 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~--~~---~---------~--~~~~~~~  225 (406)
                              +...++-...+++|+.++.++++++.    +.+- +.+++||...  ..   +         .  +.+....
T Consensus        74 --------~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~  140 (298)
T PLN02778         74 --------DWCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSF  140 (298)
T ss_pred             --------hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCc
Confidence                    11122345688899999999999884    3332 3445554321  10   0         0  0112357


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEE-ecchhhhhHHHHHHhcCCCc-ccc-cccCChhhHHHHHHHhhcC
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNA-LWPRTAIYTAAIEMLTGGSA-DAK-ATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~-v~PG~~~~t~~~~~~~~~~~-~~~-~~~~~pe~vA~~v~~L~s~  295 (406)
                      |+.||.+.+.+++..+..   .++|+.. ..++......+......... ... ..+...+|++++++.++..
T Consensus       141 Yg~sK~~~E~~~~~y~~~---~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~  210 (298)
T PLN02778        141 YSKTKAMVEELLKNYENV---CTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKR  210 (298)
T ss_pred             hHHHHHHHHHHHHHhhcc---EEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhC
Confidence            999999999998876543   3566532 22221011112222222211 111 1234567788888887753

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.96  E-value=2.4e-08  Score=95.17  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=60.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|.+|+.++++|+++|++|.+..|+.++...                ..+..+.+|+.|++++.++++.. +.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----------------~~~~~~~~d~~d~~~l~~a~~~~-~~   63 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----------------PNEKHVKFDWLDEDTWDNPFSSD-DG   63 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----------------CCCccccccCCCHHHHHHHHhcc-cC
Confidence            37999999999999999999999999999999875321                13455678999999999888653 33


Q ss_pred             cCC-ccEEEeccc
Q psy6113          91 FGG-IDILVNNAS  102 (406)
Q Consensus        91 ~g~-iD~linnAG  102 (406)
                      +.+ +|.++++++
T Consensus        64 ~~g~~d~v~~~~~   76 (285)
T TIGR03649        64 MEPEISAVYLVAP   76 (285)
T ss_pred             cCCceeEEEEeCC
Confidence            445 899998876

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02996 fatty acyl-CoA reductase

Probab=98.96  E-value=1.3e-08  Score=104.30  Aligned_cols=131  Identities=20%  Similarity=0.251  Sum_probs=86.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC---eEEEEecCCCCCCCCcccHH-HH-----HHHHHH-c--------CCeee
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA---NIVIAAKTAEPHPKLPGTIY-SA-----AKEVED-A--------GGNCL   68 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~~~~~i~-~~-----~~~~~~-~--------g~~~~   68 (406)
                      ++||+++||||+|-||..++++|++.+-   +|++..|..... ...+.+. +.     .+.+.+ .        ..++.
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~-~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAK-SATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCC-CHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            6899999999999999999999998653   678888876532 2111111 10     000001 1        14688


Q ss_pred             eeeecCCCh-------HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHH
Q psy6113          69 PCIVDIRDE-------HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQS  141 (406)
Q Consensus        69 ~~~~Dl~~~-------~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (406)
                      ++..|++++       +..+++++       .+|++||+|+....                                   
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----------------------------------  125 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----------------------------------  125 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----------------------------------
Confidence            899999843       33333332       58999999986431                                   


Q ss_pred             HHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCC
Q psy6113         142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN  214 (406)
Q Consensus       142 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~  214 (406)
                                                  .   ++....+++|+.|+..+++++...   .+-.++|++||...
T Consensus       126 ----------------------------~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~~k~~V~vST~~v  164 (491)
T PLN02996        126 ----------------------------D---ERYDVALGINTLGALNVLNFAKKC---VKVKMLLHVSTAYV  164 (491)
T ss_pred             ----------------------------c---CCHHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEEeeeEE
Confidence                                        1   234567889999999998877431   12358999998653

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.92  E-value=6.6e-09  Score=99.27  Aligned_cols=182  Identities=19%  Similarity=0.203  Sum_probs=112.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++|||++|-||.++.+.|.++|++|+..+|.                            .+|++|.+++.+++++.   
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------------~~dl~d~~~~~~~~~~~---   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------------DLDLTDPEAVAKLLEAF---   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------------CS-TTSHHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------------hcCCCCHHHHHHHHHHh---
Confidence            58999999999999999999999999988665                            35999999999998876   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||+||....                                                               +
T Consensus        51 --~pd~Vin~aa~~~~---------------------------------------------------------------~   65 (286)
T PF04321_consen   51 --KPDVVINCAAYTNV---------------------------------------------------------------D   65 (286)
T ss_dssp             ----SEEEE------H---------------------------------------------------------------H
T ss_pred             --CCCeEeccceeecH---------------------------------------------------------------H
Confidence              59999999997532                                                               2


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---c------cCCchhhhHhhHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---W------FKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---~------~~~~~~Y~asKaal~~l~~~la  241 (406)
                      ....+-+..+.+|+.++..+.+.+    .+. +.++|++||..-+.+.   +      ..+...|+-+|...+...+...
T Consensus        66 ~ce~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~  140 (286)
T PF04321_consen   66 ACEKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC  140 (286)
T ss_dssp             HHHHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-
T ss_pred             hhhhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence            223345678899999999999988    333 3799999997443221   1      1235689999999888887633


Q ss_pred             HhhcCCCeEEEEec-chh-hhhHHHHHHhcCCCcc-----cccccCChhhHHHHHHHhhcC
Q psy6113         242 EEFKGDNIAVNALW-PRT-AIYTAAIEMLTGGSAD-----AKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       242 ~e~~~~gI~vn~v~-PG~-~~~t~~~~~~~~~~~~-----~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ..+.  =+|...+. |.. -.-..+.+.+.....-     ........+|+|+.+..|+..
T Consensus       141 ~~~~--IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~  199 (286)
T PF04321_consen  141 PNAL--ILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEK  199 (286)
T ss_dssp             SSEE--EEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHH
T ss_pred             CCEE--EEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHh
Confidence            2110  13443322 100 0111222333222111     112234579999999999864

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.90  E-value=7.9e-08  Score=91.45  Aligned_cols=36  Identities=31%  Similarity=0.545  Sum_probs=33.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      ++||||+|.||..+++.|+++|++|++++|+.+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   36 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGA   36 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCC
Confidence            589999999999999999999999999999887643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.85  E-value=1.6e-08  Score=89.52  Aligned_cols=85  Identities=19%  Similarity=0.317  Sum_probs=69.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+ |+|.+++++|+++|++|++.+|+.++.       ......+. ...++.++.+|++|++++.++++.+.+.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~-------~~l~~~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~   72 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKL-------ENVKREST-TPESITPLPLDYHDDDALKLAIKSTIEK   72 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHH-------HHHHHHhh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999998 888899999999999999999976532       12222232 2457888899999999999999999999


Q ss_pred             cCCccEEEeccccc
Q psy6113          91 FGGIDILVNNASAI  104 (406)
Q Consensus        91 ~g~iD~linnAG~~  104 (406)
                      ++++|++|+.+-..
T Consensus        73 ~g~id~lv~~vh~~   86 (177)
T PRK08309         73 NGPFDLAVAWIHSS   86 (177)
T ss_pred             cCCCeEEEEecccc
Confidence            99999999887643

>KOG1430|consensus

Probab=98.78  E-value=1.1e-07  Score=92.21  Aligned_cols=164  Identities=20%  Similarity=0.223  Sum_probs=115.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++.+++||||+|-||+.++++|.+++  ..|.+++..+....-       ..++.....+.+.++.+|+.+..++.+.++
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~-------~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNL-------PAELTGFRSGRVTVILGDLLDANSISNAFQ   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccccc-------chhhhcccCCceeEEecchhhhhhhhhhcc
Confidence            57899999999999999999999999  689999887752111       011111135678899999999988877655


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                             +. .+||+|....+                                                           
T Consensus        76 -------~~-~Vvh~aa~~~~-----------------------------------------------------------   88 (361)
T KOG1430|consen   76 -------GA-VVVHCAASPVP-----------------------------------------------------------   88 (361)
T ss_pred             -------Cc-eEEEeccccCc-----------------------------------------------------------
Confidence                   45 66666664332                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------ccC--CchhhhHhhHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------WFK--NHVAYTISKYGM  233 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------~~~--~~~~Y~asKaal  233 (406)
                          .....+-+..+++|+.|+.+++.++    .+.+-.++|++||..-..+.          +.|  ....|+.||+--
T Consensus        89 ----~~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~a  160 (361)
T KOG1430|consen   89 ----DFVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALA  160 (361)
T ss_pred             ----cccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHH
Confidence                1222245678899999988888887    66667799999996543221          112  235899999998


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecc
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWP  256 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~P  256 (406)
                      +.+++..+.   ..+....++.|
T Consensus       161 E~~Vl~an~---~~~l~T~aLR~  180 (361)
T KOG1430|consen  161 EKLVLEANG---SDDLYTCALRP  180 (361)
T ss_pred             HHHHHHhcC---CCCeeEEEEcc
Confidence            888887765   33466666666

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.74  E-value=4.1e-08  Score=97.51  Aligned_cols=83  Identities=24%  Similarity=0.364  Sum_probs=64.8

Q ss_pred             cccCCcEEEEecC---------------Cch-HHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeee
Q psy6113           5 GKLSGLTIFITGA---------------SRG-IGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL   68 (406)
Q Consensus         5 ~~l~gk~alVTGa---------------s~G-IG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~   68 (406)
                      .+|+||+++||||               |+| +|+++|++|+++|++|++++++.+. ..              .   ..
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~~--------------~---~~  245 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-PT--------------P---AG  245 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-cC--------------C---CC
Confidence            4689999999999               455 9999999999999999999887531 10              0   01


Q ss_pred             eeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCC
Q psy6113          69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        69 ~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~  108 (406)
                      ...+|+++.+++.+.+.   +.++++|++|||||+....+
T Consensus       246 ~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        246 VKRIDVESAQEMLDAVL---AALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             cEEEccCCHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence            34679999888777665   56789999999999865443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.72  E-value=6.3e-07  Score=103.41  Aligned_cols=207  Identities=14%  Similarity=0.125  Sum_probs=126.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC----CeEEEEecCCCCCCCCcccHHHHHHHHHHc-------CCeeeeeeecCCCh
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDG----ANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-------GGNCLPCIVDIRDE   77 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~G----a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-------g~~~~~~~~Dl~~~   77 (406)
                      .++++||||+|.||..++++|+++|    ++|+...|+......    .+.........       ..++.++..|++++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~----~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG----LERLRKTGTTYGIWDEEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH----HHHHHHHHHHhCCCchhhhcceEEEeccCCCc
Confidence            5789999999999999999999988    688888887543211    11111111111       13688889999865


Q ss_pred             HHH--HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcce
Q psy6113          78 HAV--QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDI  155 (406)
Q Consensus        78 ~~v--~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~  155 (406)
                      .-.  ....+++   ...+|++||||+....                                                 
T Consensus      1047 ~lgl~~~~~~~l---~~~~d~iiH~Aa~~~~------------------------------------------------- 1074 (1389)
T TIGR03443      1047 KFGLSDEKWSDL---TNEVDVIIHNGALVHW------------------------------------------------- 1074 (1389)
T ss_pred             cCCcCHHHHHHH---HhcCCEEEECCcEecC-------------------------------------------------
Confidence            210  1112222   2368999999986421                                                 


Q ss_pred             EeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------------
Q psy6113         156 LVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------------  218 (406)
Q Consensus       156 li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------------  218 (406)
                                    ..+   +......|+.|+..+++.+    .+.+..+++++||.+.+...                 
T Consensus      1075 --------------~~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~ 1133 (1389)
T TIGR03443      1075 --------------VYP---YSKLRDANVIGTINVLNLC----AEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGI 1133 (1389)
T ss_pred             --------------ccC---HHHHHHhHHHHHHHHHHHH----HhCCCceEEEEeCeeecCcccccchhhhhhhccCCCC
Confidence                          111   2334457999999998877    33444689999997543210                 


Q ss_pred             ----c-----cCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH----------HHHHhc-----CCC--
Q psy6113         219 ----W-----FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA----------AIEMLT-----GGS--  272 (406)
Q Consensus       219 ----~-----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~----------~~~~~~-----~~~--  272 (406)
                          .     ......|+.||.+.+.+++..+.    .|+.+..+.||.+..+.          +.....     ...  
T Consensus      1134 ~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443      1134 PESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred             CcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence                0     00124599999999988876433    48999999998542210          001110     000  


Q ss_pred             cccccccCChhhHHHHHHHhhcCC
Q psy6113         273 ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       273 ~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ......+...+++|++++.++...
T Consensus      1210 ~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443      1210 INNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred             CCCccccccHHHHHHHHHHHHhCC
Confidence            001123456899999999887543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.71  E-value=2.4e-07  Score=89.20  Aligned_cols=172  Identities=13%  Similarity=0.119  Sum_probs=113.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHH----HHcCCeeeeeeecCCChH--HHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEV----EDAGGNCLPCIVDIRDEH--AVQS   82 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~----~~~g~~~~~~~~Dl~~~~--~v~~   82 (406)
                      +++++|||+|-||+-+.++|..+- ++|++.-|-... +.+.+.+.++....    +....++..+..|++.+.  =-+.
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~-E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD-EAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH-HHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            579999999999999999998765 599988776542 11112233333211    133568899999998432  1112


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      -.+++.   +.+|.+||||+......                                                      
T Consensus        80 ~~~~La---~~vD~I~H~gA~Vn~v~------------------------------------------------------  102 (382)
T COG3320          80 TWQELA---ENVDLIIHNAALVNHVF------------------------------------------------------  102 (382)
T ss_pred             HHHHHh---hhcceEEecchhhcccC------------------------------------------------------
Confidence            222222   25899999998653211                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc------------------cCCch
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW------------------FKNHV  224 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~------------------~~~~~  224 (406)
                                  .+.+....|+.|+..+++.+    ...+...+.+|||++......                  .....
T Consensus       103 ------------pYs~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (382)
T COG3320         103 ------------PYSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAG  166 (382)
T ss_pred             ------------cHHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeeccccccCCCccccccccccccccCccCC
Confidence                        24556778999999888876    445545699999976543221                  01236


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhh
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA  259 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~  259 (406)
                      .|+-||.+.+.+++.....    |+++..+.||++
T Consensus       167 GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I  197 (382)
T COG3320         167 GYGRSKWVAEKLVREAGDR----GLPVTIFRPGYI  197 (382)
T ss_pred             CcchhHHHHHHHHHHHhhc----CCCeEEEecCee
Confidence            8999999988887765443    899999999964

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.71  E-value=8.5e-08  Score=88.33  Aligned_cols=229  Identities=16%  Similarity=0.132  Sum_probs=149.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|++||||-+|-=|.-+|+.|++.|+.|..+.|+.......  .+ .....-...+.++..+.+|++|..++.++++.+ 
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~--ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTP--RI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcc--cc-eeccccccCCceeEEEeccccchHHHHHHHHhc-
Confidence            69999999999999999999999999999998875433210  00 011111122446889999999999999999987 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          .+|-++|-|+....                                                              
T Consensus        78 ----~PdEIYNLaAQS~V--------------------------------------------------------------   91 (345)
T COG1089          78 ----QPDEIYNLAAQSHV--------------------------------------------------------------   91 (345)
T ss_pred             ----Cchhheeccccccc--------------------------------------------------------------
Confidence                68888888886543                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCC--CCCC-------CccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPL--NLNP-------FWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~--~~~~-------~~~~~~~~Y~asKaal~~l~~~  239 (406)
                       ..+.++-..+.+++..|+.++..+.- .+- .+..++..-||..  |...       .++.+.++|+++|..-..++..
T Consensus        92 -~vSFe~P~~T~~~~~iGtlrlLEaiR-~~~-~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvN  168 (345)
T COG1089          92 -GVSFEQPEYTADVDAIGTLRLLEAIR-ILG-EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN  168 (345)
T ss_pred             -cccccCcceeeeechhHHHHHHHHHH-HhC-CcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeee
Confidence             34444455677888999999888752 222 2246777766632  1111       1245678999999998888888


Q ss_pred             HHHhhc---CCCeEEEEecch---hhhhHHHHHHh---cCCC--------cccccccCChhhHHHHHHHhhcCC--CCCc
Q psy6113         240 MAEEFK---GDNIAVNALWPR---TAIYTAAIEML---TGGS--------ADAKATSRKPEIMADAAYYILSSN--PPSL  300 (406)
Q Consensus       240 la~e~~---~~gI~vn~v~PG---~~~~t~~~~~~---~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~--~~~~  300 (406)
                      ....|.   ..||-.|.=+|.   ..++....+..   ....        -.....++-..|..++++.++..+  ..|+
T Consensus       169 YResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~PddyV  248 (345)
T COG1089         169 YRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEPDDYV  248 (345)
T ss_pred             hHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCCCCceE
Confidence            877663   568888988885   11222222211   1111        112344667888888887777532  3344


Q ss_pred             --cceEEEehhH
Q psy6113         301 --TGQFLIDDEV  310 (406)
Q Consensus       301 --tG~~i~d~g~  310 (406)
                        ||..-....+
T Consensus       249 iATg~t~sVref  260 (345)
T COG1089         249 IATGETHSVREF  260 (345)
T ss_pred             EecCceeeHHHH
Confidence              5665544333

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.64  E-value=6.9e-07  Score=93.05  Aligned_cols=130  Identities=18%  Similarity=0.307  Sum_probs=86.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC---eEEEEecCCCCCCCCcccHH-HH-----HHHHHHc---------CCeee
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA---NIVIAAKTAEPHPKLPGTIY-SA-----AKEVEDA---------GGNCL   68 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~~~~~i~-~~-----~~~~~~~---------g~~~~   68 (406)
                      ++||+++||||+|-||..++++|++.+.   +|++..|...... ..+.+. +.     .+.+.+.         ..++.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~-a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEA-AIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchh-HHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            6899999999999999999999998764   6788888655321 111111 00     1111111         24688


Q ss_pred             eeeecCCChH------HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHH
Q psy6113          69 PCIVDIRDEH------AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSA  142 (406)
Q Consensus        69 ~~~~Dl~~~~------~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (406)
                      ++..|++++.      ..+.+.       ..+|++||+|+....                                    
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~f------------------------------------  232 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTTF------------------------------------  232 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHH-------hcCCEEEECcccccc------------------------------------
Confidence            8999999873      233222       258999999986421                                    


Q ss_pred             HHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCC
Q psy6113         143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPL  213 (406)
Q Consensus       143 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~  213 (406)
                                                 +   +..+..+++|+.|+.++++.+...   .+..++|++||..
T Consensus       233 ---------------------------~---~~~~~a~~vNV~GT~nLLelA~~~---~~lk~fV~vSTay  270 (605)
T PLN02503        233 ---------------------------D---ERYDVAIDINTRGPCHLMSFAKKC---KKLKLFLQVSTAY  270 (605)
T ss_pred             ---------------------------c---cCHHHHHHHHHHHHHHHHHHHHHc---CCCCeEEEccCce
Confidence                                       1   235667889999999998877432   1234788888854

>PLN00016 RNA-binding protein; Provisional

Probab=98.63  E-value=8.9e-07  Score=88.01  Aligned_cols=86  Identities=24%  Similarity=0.329  Sum_probs=56.4

Q ss_pred             cCCcEEEEe----cCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           7 LSGLTIFIT----GASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         7 l~gk~alVT----Gas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ...++++||    ||+|.||..++++|+++|++|++++|+..........-.....++...  .+.++..|+.|   +.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~v~~v~~D~~d---~~~  124 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA--GVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc--CceEEEecHHH---HHh
Confidence            345789999    999999999999999999999999998764322111000111122222  36677888866   222


Q ss_pred             HHHHHHHhcCCccEEEeccc
Q psy6113          83 AVNAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG  102 (406)
                      ++     ...++|++|++++
T Consensus       125 ~~-----~~~~~d~Vi~~~~  139 (378)
T PLN00016        125 KV-----AGAGFDVVYDNNG  139 (378)
T ss_pred             hh-----ccCCccEEEeCCC
Confidence            22     1236889998765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.62  E-value=8.4e-07  Score=94.78  Aligned_cols=144  Identities=13%  Similarity=0.082  Sum_probs=98.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ..+++|||||+|-||++++++|.++|++|.+.                               ..|++|.+.+...+...
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------------~~~l~d~~~v~~~i~~~  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------------KGRLEDRSSLLADIRNV  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------------ccccccHHHHHHHHHhh
Confidence            34579999999999999999999999887321                               12567777777666543


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++||+|+.......                                                          
T Consensus       428 -----~pd~Vih~Aa~~~~~~~----------------------------------------------------------  444 (668)
T PLN02260        428 -----KPTHVFNAAGVTGRPNV----------------------------------------------------------  444 (668)
T ss_pred             -----CCCEEEECCcccCCCCC----------------------------------------------------------
Confidence                 68999999997532110                                                          


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCC-----------CC-----ccCCchhhhHhhH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLN-----------PF-----WFKNHVAYTISKY  231 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~-----------~~-----~~~~~~~Y~asKa  231 (406)
                        +...++-...+++|+.++.++++++.    +.+ .+.|++||...+.           +.     +.+....|+.||.
T Consensus       445 --~~~~~~~~~~~~~N~~gt~~l~~a~~----~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~  517 (668)
T PLN02260        445 --DWCESHKVETIRANVVGTLTLADVCR----ENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKA  517 (668)
T ss_pred             --ChHHhCHHHHHHHHhHHHHHHHHHHH----HcC-CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHH
Confidence              22233446788899999999999984    333 3566666643211           10     0112367999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEec
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALW  255 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~  255 (406)
                      +.+.+++....   ...+|+..+.
T Consensus       518 ~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        518 MVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             HHHHHHHhhhh---heEEEEEEec
Confidence            99999887642   2457776665

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.55  E-value=1.4e-06  Score=80.51  Aligned_cols=75  Identities=17%  Similarity=0.342  Sum_probs=59.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++||||+|.+|+.+++.|++.+++|.+..|+...         ...+.++..|..  .+..|..|++++.++++      
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~---------~~~~~l~~~g~~--vv~~d~~~~~~l~~al~------   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS---------DRAQQLQALGAE--VVEADYDDPESLVAALK------   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH---------HHHHHHHHTTTE--EEES-TT-HHHHHHHHT------
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch---------hhhhhhhcccce--EeecccCCHHHHHHHHc------
Confidence            6899999999999999999999999999998732         345556666654  56899999988776655      


Q ss_pred             CCccEEEeccccc
Q psy6113          92 GGIDILVNNASAI  104 (406)
Q Consensus        92 g~iD~linnAG~~  104 (406)
                       ++|.+|++.+..
T Consensus        64 -g~d~v~~~~~~~   75 (233)
T PF05368_consen   64 -GVDAVFSVTPPS   75 (233)
T ss_dssp             -TCSEEEEESSCS
T ss_pred             -CCceEEeecCcc
Confidence             789999887743

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.49  E-value=5e-07  Score=89.44  Aligned_cols=84  Identities=21%  Similarity=0.304  Sum_probs=64.4

Q ss_pred             cccCCcEEEEecC---------------Cch-HHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeee
Q psy6113           5 GKLSGLTIFITGA---------------SRG-IGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL   68 (406)
Q Consensus         5 ~~l~gk~alVTGa---------------s~G-IG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~   68 (406)
                      .+|+||+++||||               |+| +|+++|++|+++|++|++++++.....                ..  .
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~----------------~~--~  242 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT----------------PP--G  242 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC----------------CC--C
Confidence            3689999999999               667 999999999999999999887654210                11  1


Q ss_pred             eeeecCCChHHH-HHHHHHHHHhcCCccEEEecccccccCCC
Q psy6113          69 PCIVDIRDEHAV-QSAVNAAVDKFGGIDILVNNASAISLTDT  109 (406)
Q Consensus        69 ~~~~Dl~~~~~v-~~~~~~i~~~~g~iD~linnAG~~~~~~~  109 (406)
                      ...+|+++.+++ ++++++   .++++|++|+|||+....+.
T Consensus       243 ~~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       243 VKSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             cEEEEeccHHHHHHHHHHh---hcccCCEEEEcccccccccc
Confidence            245799999888 555544   35789999999999765543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.48  E-value=4e-07  Score=87.06  Aligned_cols=87  Identities=24%  Similarity=0.370  Sum_probs=63.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++++|+++|||+ ||+|++++..|++.|++ |++++|+.+..+    ..++..+++...+..+....+|+++.+++.+.+
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~----~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~  197 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYE----RAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI  197 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHH----HHHHHHHHHhhcCCCceeEEechhhhhHHHhhh
Confidence            578999999999 69999999999999996 999999863111    123445555544455566678888777765543


Q ss_pred             HHHHHhcCCccEEEeccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~  104 (406)
                      +       ..|+||||--+.
T Consensus       198 ~-------~~DilINaTp~G  210 (289)
T PRK12548        198 A-------SSDILVNATLVG  210 (289)
T ss_pred             c-------cCCEEEEeCCCC
Confidence            3       459999987654

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.38  E-value=1.8e-06  Score=79.61  Aligned_cols=78  Identities=18%  Similarity=0.200  Sum_probs=51.9

Q ss_pred             cEEEEecCCch-HHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRG-IGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~G-IG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .+-.||+.|+| ||+++|++|+++|++|++++|+......              ....+.++.+     ++..++.+.+.
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~--------------~~~~v~~i~v-----~s~~~m~~~l~   76 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE--------------PHPNLSIIEI-----ENVDDLLETLE   76 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCC--------------CCCCeEEEEE-----ecHHHHHHHHH
Confidence            46677766766 9999999999999999999876432110              0123344432     23344444455


Q ss_pred             HhcCCccEEEeccccccc
Q psy6113          89 DKFGGIDILVNNASAISL  106 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~  106 (406)
                      +.++.+|++|||||+...
T Consensus        77 ~~~~~~DivIh~AAvsd~   94 (229)
T PRK06732         77 PLVKDHDVLIHSMAVSDY   94 (229)
T ss_pred             HHhcCCCEEEeCCccCCc
Confidence            556789999999998653

>PRK12320 hypothetical protein; Provisional

Probab=98.31  E-value=4.6e-06  Score=88.06  Aligned_cols=69  Identities=16%  Similarity=0.246  Sum_probs=54.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|.||..++++|.++|++|++++|.....                ....+.++.+|+++.. +.+++      
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------------~~~~ve~v~~Dl~d~~-l~~al------   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------------LDPRVDYVCASLRNPV-LQELA------   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------------ccCCceEEEccCCCHH-HHHHh------
Confidence            589999999999999999999999999999864321                1235778899999873 33222      


Q ss_pred             cCCccEEEecccc
Q psy6113          91 FGGIDILVNNASA  103 (406)
Q Consensus        91 ~g~iD~linnAG~  103 (406)
                       .++|++||.|+.
T Consensus        59 -~~~D~VIHLAa~   70 (699)
T PRK12320         59 -GEADAVIHLAPV   70 (699)
T ss_pred             -cCCCEEEEcCcc
Confidence             368999999985

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.31  E-value=7.6e-06  Score=82.60  Aligned_cols=228  Identities=14%  Similarity=0.073  Sum_probs=128.7

Q ss_pred             CCcccCCcEEEEecCC-chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           3 NTGKLSGLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         3 ~~~~l~gk~alVTGas-~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      |...+.+++++||||+ +.||.+++.+|++-|++||++..+-.+..  .+.-..........|.....+..++++..+++
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r--~efyr~LYa~~a~~ga~LwvVpaN~~SysDVd  467 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEER--TEFYRSLYARHARYGAALWVVPANMGSYSDVD  467 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHH--HHHHHHHHHhhCCCCceEEEEeccccchhhHH
Confidence            3456889999999999 56999999999999999999755433210  01111122223345667888899999999999


Q ss_pred             HHHHHHHHhcC--------------CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHH
Q psy6113          82 SAVNAAVDKFG--------------GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAV  147 (406)
Q Consensus        82 ~~~~~i~~~~g--------------~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (406)
                      ++++-|-+...              .+|++|--|.+.                                           
T Consensus       468 AlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~-------------------------------------------  504 (866)
T COG4982         468 ALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR-------------------------------------------  504 (866)
T ss_pred             HHHHHhccccccccCCcceecccccCcceeeecccCC-------------------------------------------
Confidence            99998865321              133333333322                                           


Q ss_pred             hhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCch
Q psy6113         148 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHV  224 (406)
Q Consensus       148 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~  224 (406)
                                      -...+.+.... -+..+++-+.....++-.+.+.-..++   .-++|.-.|...-  . |.+-.
T Consensus       505 ----------------v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPNrG--~-FGgDG  564 (866)
T COG4982         505 ----------------VSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPNRG--M-FGGDG  564 (866)
T ss_pred             ----------------ccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCCCC--c-cCCCc
Confidence                            11222222221 122334444444444443322221111   2456666665421  1 45678


Q ss_pred             hhhHhhHHHHHHHHHHHHh--hcCCCeEEEEecchhhhhHHHHHHhc---CCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         225 AYTISKYGMSMCALGMAEE--FKGDNIAVNALWPRTAIYTAAIEMLT---GGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e--~~~~gI~vn~v~PG~~~~t~~~~~~~---~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      .|+-||++++.+..-+..|  |+.+ +.+..-.-||+.-|.++....   ..-++..-+.-+++|+|.-++-||+.+
T Consensus       565 aYgEsK~aldav~~RW~sEs~Wa~~-vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~GV~tyS~~EmA~~LLgL~sae  640 (866)
T COG4982         565 AYGESKLALDAVVNRWHSESSWAAR-VSLAHALIGWTRGTGLMGHNDIIVAAIEKAGVRTYSTDEMAFNLLGLASAE  640 (866)
T ss_pred             chhhHHHHHHHHHHHhhccchhhHH-HHHhhhheeeeccccccCCcchhHHHHHHhCceecCHHHHHHHHHhhccHH
Confidence            9999999999886555444  2221 333333346655553321110   000112234458999999999988753

>KOG1202|consensus

Probab=98.26  E-value=5.3e-06  Score=88.63  Aligned_cols=168  Identities=13%  Similarity=0.109  Sum_probs=127.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ..|.++|+||-+|.|+.+|..|..+|+ .+|+.+|+.-+..-    ........+..|.++..-..|++..+..+.++++
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGY----Qa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGY----QALMVRRWRRRGVQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhH----HHHHHHHHHhcCeEEEEecccchhhhhHHHHHHH
Confidence            468899999999999999999999999 68899998765331    1223455667788888888999999999999887


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .. +.+.+-.++|-|.+....-+.                                                        
T Consensus      1843 s~-kl~~vGGiFnLA~VLRD~LiE-------------------------------------------------------- 1865 (2376)
T KOG1202|consen 1843 SN-KLGPVGGIFNLAAVLRDGLIE-------------------------------------------------------- 1865 (2376)
T ss_pred             hh-hcccccchhhHHHHHHhhhhc--------------------------------------------------------
Confidence            64 467888888888877665444                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         +.++++|+.+-+-.+.|+.++-+.--.+--+  -.-+|..||.+.-+++  .|+..|+-+.++++.++..-..+
T Consensus      1866 ---nQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN--~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1866 ---NQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGN--AGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ---ccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCC--CcccccchhhHHHHHHHHHhhhc
Confidence               7777888888887888877765543222111  1467888888776664  79999999999999988754443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.25  E-value=6.4e-06  Score=76.10  Aligned_cols=35  Identities=29%  Similarity=0.493  Sum_probs=32.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH   46 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~   46 (406)
                      ++||||+|-||++++.+|.+.|+.|+++.|+..+.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~   35 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKA   35 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcch
Confidence            58999999999999999999999999999998764

>PF14864 Alkyl_sulf_C: Alkyl sulfatase C-terminal; PDB: 2CG2_A 2CG3_A 2CFU_A 2CFZ_A 2YHE_C

Probab=98.24  E-value=8.4e-07  Score=73.90  Aligned_cols=71  Identities=30%  Similarity=0.510  Sum_probs=56.7

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHH
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMG  400 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~  400 (406)
                      ...|.+.+++|.-....+....+||+|++++..+|.+|+.|+.++..+...|++||+||...-.+|-.+|+
T Consensus        44 ~e~~~l~l~NgvL~~~~~~~~~~ad~tlt~~~~~l~~l~~g~~~~~~~i~~g~i~v~Gd~~~~~~~~~~ld  114 (125)
T PF14864_consen   44 GEQYTLELRNGVLNYRKGSPSPDADATLTLTRQTLLALLLGKTSLNEAIASGKIKVEGDPDALEEFLGLLD  114 (125)
T ss_dssp             TEEEEEEEETTEEEEEET---TT-SEEEEE-HHHHHHHHTTSS-HHHHHHTTSCEEEE-CCHHHHHHCTB-
T ss_pred             CCeEEEEEECCEEEeecCCCCCCCCEEEEECHHHHHHHHhCCcchhHHhhcCCEEEECCHHHHHHHHHHhc
Confidence            35899999999888877766678999999999999999999999999999999999999887777766654

>KOG2865|consensus

Probab=98.10  E-value=3.8e-05  Score=71.09  Aligned_cols=142  Identities=21%  Similarity=0.276  Sum_probs=104.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC--CeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG--GNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g--~~~~~~~~Dl~~~~~v~~   82 (406)
                      .+++|-++-|.||++-+|+-++.+|++.|..|++-.|..+...          ..++-.|  +++.+...|+.|++++++
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~----------r~lkvmGdLGQvl~~~fd~~DedSIr~  126 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP----------RHLKVMGDLGQVLFMKFDLRDEDSIRA  126 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch----------hheeecccccceeeeccCCCCHHHHHH
Confidence            4688999999999999999999999999999999998776421          1222222  589999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++.       -+++||-.|--....                                                      
T Consensus       127 vvk~-------sNVVINLIGrd~eTk------------------------------------------------------  145 (391)
T KOG2865|consen  127 VVKH-------SNVVINLIGRDYETK------------------------------------------------------  145 (391)
T ss_pred             HHHh-------CcEEEEeeccccccC------------------------------------------------------
Confidence            8874       589999988533221                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                             +.+      .-++|+.++-.+.+.+    ++.+--++|.+|+..+..    ...+-|--||++-+--++
T Consensus       146 -------nf~------f~Dvn~~~aerlAric----ke~GVerfIhvS~Lganv----~s~Sr~LrsK~~gE~aVr  200 (391)
T KOG2865|consen  146 -------NFS------FEDVNVHIAERLARIC----KEAGVERFIHVSCLGANV----KSPSRMLRSKAAGEEAVR  200 (391)
T ss_pred             -------Ccc------cccccchHHHHHHHHH----HhhChhheeehhhccccc----cChHHHHHhhhhhHHHHH
Confidence                   111      2246777777777766    666656899999987542    445667788877665444

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.09  E-value=1.8e-05  Score=71.05  Aligned_cols=84  Identities=24%  Similarity=0.333  Sum_probs=61.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++++++|+||++++|+++++.|+++|++|++++|+.++++       +..+.+.+.. ......+|..+.+++.+.++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~-------~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQ-------KAADSLRARF-GEGVGAVETSDDAARAAAIK   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-------HHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh
Confidence            688999999999999999999999999999999999865432       3333343211 23345578888887766553


Q ss_pred             HHHHhcCCccEEEeccccc
Q psy6113          86 AAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~  104 (406)
                             ..|++|++....
T Consensus        97 -------~~diVi~at~~g  108 (194)
T cd01078          97 -------GADVVFAAGAAG  108 (194)
T ss_pred             -------cCCEEEECCCCC
Confidence                   568888876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1429|consensus

Probab=98.05  E-value=0.00011  Score=68.08  Aligned_cols=159  Identities=15%  Similarity=0.035  Sum_probs=103.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ...+++++||||+|-||..+|.+|..+|+.|++.+.-.......      ....+.  ..++..+.-|+..+     ++ 
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n------~~~~~~--~~~fel~~hdv~~p-----l~-   89 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKEN------LEHWIG--HPNFELIRHDVVEP-----LL-   89 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhh------cchhcc--CcceeEEEeechhH-----HH-
Confidence            35678999999999999999999999999999987654432210      111111  22344455566554     22 


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                            ..+|.++|-|....+.....                                                      
T Consensus        90 ------~evD~IyhLAapasp~~y~~------------------------------------------------------  109 (350)
T KOG1429|consen   90 ------KEVDQIYHLAAPASPPHYKY------------------------------------------------------  109 (350)
T ss_pred             ------HHhhhhhhhccCCCCccccc------------------------------------------------------
Confidence                  24788899998776544320                                                      


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------ccCCchhhhHhhH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------WFKNHVAYTISKY  231 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------~~~~~~~Y~asKa  231 (406)
                            .   -..++.+|..++.++...+...     ..|++..|+..-+...              +....+.|...|.
T Consensus       110 ------n---pvktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr  175 (350)
T KOG1429|consen  110 ------N---PVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKR  175 (350)
T ss_pred             ------C---ccceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHH
Confidence                  0   1246678999999888877332     2688888775432211              1234678999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEec
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALW  255 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~  255 (406)
                      ..+.|+....++.   ||.|-...
T Consensus       176 ~aE~L~~~y~k~~---giE~rIaR  196 (350)
T KOG1429|consen  176 VAETLCYAYHKQE---GIEVRIAR  196 (350)
T ss_pred             HHHHHHHHhhccc---CcEEEEEe
Confidence            9888888776654   55554443

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.99  E-value=0.00033  Score=65.72  Aligned_cols=73  Identities=21%  Similarity=0.355  Sum_probs=60.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .++|||||+.+|.+++++|.++|++|++..|+.++...           ..   ..+.+...|+.++.++...++     
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~-----------~~---~~v~~~~~d~~~~~~l~~a~~-----   62 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAA-----------LA---GGVEVVLGDLRDPKSLVAGAK-----   62 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHh-----------hc---CCcEEEEeccCCHhHHHHHhc-----
Confidence            58999999999999999999999999999999886432           12   568888999999998877655     


Q ss_pred             cCCccEEEeccccc
Q psy6113          91 FGGIDILVNNASAI  104 (406)
Q Consensus        91 ~g~iD~linnAG~~  104 (406)
                        ++|.+++..+..
T Consensus        63 --G~~~~~~i~~~~   74 (275)
T COG0702          63 --GVDGVLLISGLL   74 (275)
T ss_pred             --cccEEEEEeccc
Confidence              677777777654

>COG3154 Putative lipid carrier protein [Lipid metabolism]

Probab=97.88  E-value=2.2e-05  Score=65.90  Aligned_cols=70  Identities=23%  Similarity=0.434  Sum_probs=62.6

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL  402 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~  402 (406)
                      .=.|.+...+|...+.+-   ..+|++|+=...||+.|+.|+.+|-+.|++.+|+|+|||.+..-+..+++..
T Consensus        61 ~l~~~v~~~~g~l~v~~~---~~adv~~~g~l~dllaL~~gk~D~DtLFFqRrL~I~GDtElgLavkN~lD~~  130 (168)
T COG3154          61 PLRWFVEPVNGKLVVSRK---AQADVSFSGDLFDLLALAEGKQDPDTLFFQRRLVIEGDTELGLAVKNLLDAI  130 (168)
T ss_pred             CeeEEEEecCCeEEEeec---cCcceEEecCHHHHHHHHcCCCCCcceEEeeeeecccchHHHHHHHHHHhhc
Confidence            346999998888777663   4789999999999999999999999999999999999999999999999863

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.84  E-value=5.8e-05  Score=76.82  Aligned_cols=134  Identities=16%  Similarity=0.245  Sum_probs=82.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++|+++|+|+++ +|+++|+.|+++|++|++.+++...      .+++..+++...+  +.++..|..+         
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~------~~~~~~~~l~~~~--~~~~~~~~~~---------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED------QLKEALEELGELG--IELVLGEYPE---------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH------HHHHHHHHHHhcC--CEEEeCCcch---------
Confidence            68899999999887 9999999999999999999987532      1223334454444  3456667765         


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCC----Chhhh---hh-hhhhccccceEEeccchhhH-HHHHHHHHhhcCCcceE
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANT----PLKKY---DL-MNQINARGTYLVKASQGLEI-QSAVNAAVDKFGGIDIL  156 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~----~~~~~---~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~id~l  156 (406)
                         +..+++|++|+++|+....+....    ..+-+   +. ....+ ...+-++-+.+.+. ...+..+++..|+...+
T Consensus        64 ---~~~~~~d~vv~~~g~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~-~~vI~ITGS~GKTTt~~~l~~iL~~~g~~~~~  139 (450)
T PRK14106         64 ---EFLEGVDLVVVSPGVPLDSPPVVQAHKKGIEVIGEVELAYRFSK-APIVAITGTNGKTTTTTLLGEIFKNAGRKTLV  139 (450)
T ss_pred             ---hHhhcCCEEEECCCCCCCCHHHHHHHHCCCcEEeHHHHHHhhcC-CCEEEEeCCCchHHHHHHHHHHHHHcCCCeEE
Confidence               123579999999997533221100    00000   00 01111 23444555666654 77888888887764444


Q ss_pred             ecccc
Q psy6113         157 VNNAS  161 (406)
Q Consensus       157 i~~ag  161 (406)
                      ..|-|
T Consensus       140 ~g~ig  144 (450)
T PRK14106        140 AGNIG  144 (450)
T ss_pred             eCccc
Confidence            44444

>KOG2733|consensus

Probab=97.79  E-value=0.00018  Score=68.63  Aligned_cols=159  Identities=17%  Similarity=0.191  Sum_probs=108.9

Q ss_pred             EEEecCCchHHHHHHHHHHH----cCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC----CeeeeeeecCCChHHHHHH
Q psy6113          12 IFITGASRGIGKAIALKAAK----DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG----GNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~----~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g----~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++|-|||+--|.-+++++.+    .|..+.+++|++++++       +..+.+.+..    .+...+.||.+|++++.++
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~-------~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~em   80 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQ-------EVLEKVGEKTGTDLSSSVILIADSANEASLDEM   80 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHH-------HHHHHHhhccCCCcccceEEEecCCCHHHHHHH
Confidence            89999999999999999999    7889999999998754       4555555544    2334788999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHH----HHHHhhcCCcceEecc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAV----NAAVDKFGGIDILVNN  159 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~id~li~~  159 (406)
                      +.+.       .+++||+|.....+.        .++..-=-.|+..++++-+.+..+..    ......  +=-++|++
T Consensus        81 ak~~-------~vivN~vGPyR~hGE--------~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~e--kGVYIVsa  143 (423)
T KOG2733|consen   81 AKQA-------RVIVNCVGPYRFHGE--------PVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKE--KGVYIVSA  143 (423)
T ss_pred             Hhhh-------EEEEeccccceecCc--------HHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHh--cCeEEEee
Confidence            8865       689999997654332        12222223467777777655533322    222222  22567888


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHh
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK  200 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~  200 (406)
                      +|.      ..++.+-+-...+-|..|..+-+..++.+..+
T Consensus       144 CGf------DSIPaDlGv~f~~k~fdg~ln~VEsfl~Lh~~  178 (423)
T KOG2733|consen  144 CGF------DSIPADLGVMFLRKNFDGVLNHVESFLQLHSK  178 (423)
T ss_pred             ccc------CCCCccceeeeehhhccccHHHHHHHHhhhcc
Confidence            883      35666656666667777877777777665543

>KOG0747|consensus

Probab=97.78  E-value=0.00017  Score=66.88  Aligned_cols=213  Identities=15%  Similarity=0.085  Sum_probs=129.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecC---CCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKT---AEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~---~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .-+.++||||.+-||...+..++..-  ++.+..+.-   .. +..        .++ .....+..++..|+.+...+.-
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~--------l~~-~~n~p~ykfv~~di~~~~~~~~   74 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKN--------LEP-VRNSPNYKFVEGDIADADLVLY   74 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cch--------hhh-hccCCCceEeeccccchHHHHh
Confidence            34889999999999999999998763  455444321   11 111        111 2234578899999999988777


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ++..     .++|.++|-|.........                                                    
T Consensus        75 ~~~~-----~~id~vihfaa~t~vd~s~----------------------------------------------------   97 (331)
T KOG0747|consen   75 LFET-----EEIDTVIHFAAQTHVDRSF----------------------------------------------------   97 (331)
T ss_pred             hhcc-----CchhhhhhhHhhhhhhhhc----------------------------------------------------
Confidence            6653     3899999999865433222                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------ccCCchhhhHhhHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------WFKNHVAYTISKYG  232 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------~~~~~~~Y~asKaa  232 (406)
                                 -+--.....|+.+...+++.+.-..   +-.++|.+|+..-+...          ...+-.+|++||+|
T Consensus        98 -----------~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaA  163 (331)
T KOG0747|consen   98 -----------GDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAA  163 (331)
T ss_pred             -----------CchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccCCCCCchHHHHHH
Confidence                       1112345678999998888875433   33589999995432211          01234579999999


Q ss_pred             HHHHHHHHHHhhcCC--CeEEEEec-chhhhhHHHHH----HhcCCCcc-------cccccCChhhHHHHHHHhhcCCCC
Q psy6113         233 MSMCALGMAEEFKGD--NIAVNALW-PRTAIYTAAIE----MLTGGSAD-------AKATSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       233 l~~l~~~la~e~~~~--gI~vn~v~-PG~~~~t~~~~----~~~~~~~~-------~~~~~~~pe~vA~~v~~L~s~~~~  298 (406)
                      .+++.+++.+.|+=.  =+|.|.|. |+- ..+....    ......+-       ....+.-.+|+++++-..+.... 
T Consensus       164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q-~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-  241 (331)
T KOG0747|consen  164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQ-YPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-  241 (331)
T ss_pred             HHHHHHHHhhccCCcEEEEeccCccCCCc-ChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-
Confidence            999999999887421  12344443 431 1111111    11111101       11224568999999887776522 


Q ss_pred             CccceEE
Q psy6113         299 SLTGQFL  305 (406)
Q Consensus       299 ~~tG~~i  305 (406)
                        -|++.
T Consensus       242 --~geIY  246 (331)
T KOG0747|consen  242 --LGEIY  246 (331)
T ss_pred             --cccee
Confidence              46655

>PRK09620 hypothetical protein; Provisional

Probab=97.75  E-value=8e-05  Score=68.58  Aligned_cols=86  Identities=16%  Similarity=0.224  Sum_probs=53.3

Q ss_pred             cCCcEEEEecCC----------------chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeee
Q psy6113           7 LSGLTIFITGAS----------------RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC   70 (406)
Q Consensus         7 l~gk~alVTGas----------------~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~   70 (406)
                      |+||.++||+|.                |-+|.++|++|+++|++|+++++........          . ..+.....+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~----------~-~~~~~~~~V   69 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND----------I-NNQLELHPF   69 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc----------c-CCceeEEEE
Confidence            579999999885                8999999999999999999887643211110          0 001222233


Q ss_pred             eecCCChHHHHHHHHHHHHhcCCccEEEecccccccCC
Q psy6113          71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        71 ~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~  108 (406)
                      ..    ..+....+.++.+. ..+|++||+|++....+
T Consensus        70 ~s----~~d~~~~l~~~~~~-~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         70 EG----IIDLQDKMKSIITH-EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             ec----HHHHHHHHHHHhcc-cCCCEEEECccccceec
Confidence            32    22222233333221 25899999999865443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.70  E-value=9.8e-05  Score=72.60  Aligned_cols=75  Identities=29%  Similarity=0.518  Sum_probs=61.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +.+||.|+ |++|+.+|..|+++| .+|++++|+.+++           .++ ...+.++.+.++|+.+.+++.+++++ 
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~-----------~~i~~~~~~~v~~~~vD~~d~~al~~li~~-   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKC-----------ARIAELIGGKVEALQVDAADVDALVALIKD-   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHH-----------HHHHhhccccceeEEecccChHHHHHHHhc-
Confidence            45889999 999999999999999 7999999997752           223 22345899999999999998888774 


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                            .|++||++..
T Consensus        69 ------~d~VIn~~p~   78 (389)
T COG1748          69 ------FDLVINAAPP   78 (389)
T ss_pred             ------CCEEEEeCCc
Confidence                  2999999874

>KOG1221|consensus

Probab=97.70  E-value=0.00014  Score=72.93  Aligned_cols=137  Identities=19%  Similarity=0.253  Sum_probs=82.0

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcC--C-eEEEEecCCCCCCCCcccHHHH-----HHHHHHcC----CeeeeeeecC
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDG--A-NIVIAAKTAEPHPKLPGTIYSA-----AKEVEDAG----GNCLPCIVDI   74 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~G--a-~Vvl~~r~~~~~~~~~~~i~~~-----~~~~~~~g----~~~~~~~~Dl   74 (406)
                      ++||+++||||+|.+|+.+.+.|++.-  . ++++.-|... .++..+.++..     .+.+.+..    .++..+..|+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~-g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKK-GKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCC-CCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            689999999999999999999999764  2 5666666543 33322222221     12222221    3556666666


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcc
Q psy6113          75 RDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGID  154 (406)
Q Consensus        75 ~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id  154 (406)
                      ++++---+--+.- .-...+|++||+|+....                                                
T Consensus        89 ~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF------------------------------------------------  119 (467)
T KOG1221|consen   89 SEPDLGISESDLR-TLADEVNIVIHSAATVRF------------------------------------------------  119 (467)
T ss_pred             cCcccCCChHHHH-HHHhcCCEEEEeeeeecc------------------------------------------------
Confidence            6543221111111 112356777777775432                                                


Q ss_pred             eEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCC
Q psy6113         155 ILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN  214 (406)
Q Consensus       155 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~  214 (406)
                                        .|.++..+.+|.+|+..+.+.+.....-   ...+.+|....
T Consensus       120 ------------------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~vhVSTAy~  158 (467)
T KOG1221|consen  120 ------------------DEPLDVALGINTRGTRNVLQLAKEMVKL---KALVHVSTAYS  158 (467)
T ss_pred             ------------------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heEEEeehhhe
Confidence                              1335667889999999999988655443   36777777543

>KOG1431|consensus

Probab=97.64  E-value=0.00092  Score=60.10  Aligned_cols=62  Identities=18%  Similarity=0.251  Sum_probs=49.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC---eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA---NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +.++|||++|=.|.||.+.+.+.|.   +.++.+..                            .+|+++.+++++++++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------------------d~DLt~~a~t~~lF~~   53 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------------------DADLTNLADTRALFES   53 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------------------cccccchHHHHHHHhc
Confidence            6799999999999999999999875   34443221                            3599999999999987


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                      .     ++-++|+.|+..
T Consensus        54 e-----kPthVIhlAAmV   66 (315)
T KOG1431|consen   54 E-----KPTHVIHLAAMV   66 (315)
T ss_pred             c-----CCceeeehHhhh
Confidence            5     577888888754

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.53  E-value=0.00019  Score=72.89  Aligned_cols=136  Identities=17%  Similarity=0.224  Sum_probs=79.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+++||+++|||+++ +|.++|+.|+++|++|++.+++.....       ...+++...|.++..  .  .+...+   .
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~-------~~~~~l~~~g~~~~~--~--~~~~~~---~   65 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSEN-------PEAQELLEEGIKVIC--G--SHPLEL---L   65 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccch-------hHHHHHHhcCCEEEe--C--CCCHHH---h
Confidence            457899999999986 999999999999999999987654322       223445555543321  1  111111   1


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCC------Ch-hhhhhhhhhccccceEEeccchhhH-HHHHHHHHhhcCCcceE
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANT------PL-KKYDLMNQINARGTYLVKASQGLEI-QSAVNAAVDKFGGIDIL  156 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~id~l  156 (406)
                          .  ..+|++|+++|+....+....      +. .+.+....+.-...+-++-+.+.+. ..++.++++..|+.-.+
T Consensus        66 ----~--~~~d~vV~s~gi~~~~~~~~~a~~~~i~v~~~~el~~~~~~~~~I~VTGT~GKTTTt~ll~~iL~~~g~~~~~  139 (447)
T PRK02472         66 ----D--EDFDLMVKNPGIPYTNPMVEKALEKGIPIITEVELAYLISEAPIIGITGSNGKTTTTTLIGEMLKAGGQHALL  139 (447)
T ss_pred             ----c--CcCCEEEECCCCCCCCHHHHHHHHCCCcEEeHHHHHHHhcCCCEEEEeCCCchHHHHHHHHHHHHHCCCCeEE
Confidence                1  148999999998654332100      00 0000111111112445666666664 77888888887754444


Q ss_pred             ecccc
Q psy6113         157 VNNAS  161 (406)
Q Consensus       157 i~~ag  161 (406)
                      .-|-|
T Consensus       140 ~Gnig  144 (447)
T PRK02472        140 AGNIG  144 (447)
T ss_pred             EcccC
Confidence            44444

>KOG1372|consensus

Probab=97.53  E-value=0.00022  Score=64.78  Aligned_cols=218  Identities=13%  Similarity=0.089  Sum_probs=127.4

Q ss_pred             cCC-cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHH-HHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSG-LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAK-EVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~g-k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~-~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++. |++||||-++-=|.-+|+-|+..|+.|..+-|+....+-.  .|+-... -....++....+..|++|..++.+++
T Consensus        25 ~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~--RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I  102 (376)
T KOG1372|consen   25 FRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTA--RIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI  102 (376)
T ss_pred             cccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchh--hhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence            444 5999999999999999999999999999888876654321  1111111 11233567788899999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+     .++-+.|-|+.....                                                         
T Consensus       103 ~~i-----kPtEiYnLaAQSHVk---------------------------------------------------------  120 (376)
T KOG1372|consen  103 STI-----KPTEVYNLAAQSHVK---------------------------------------------------------  120 (376)
T ss_pred             hcc-----CchhhhhhhhhcceE---------------------------------------------------------
Confidence            887     455566666644322                                                         


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCC--CCC-C--C----CccCCchhhhHhhHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP--LNL-N--P----FWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~--~~~-~--~----~~~~~~~~Y~asKaal~~  235 (406)
                            .+-+--+.+-++...|+..+..+....-...+ -++---|+.  .+- .  |    -++.+.++|+++|..-.-
T Consensus       121 ------vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W  193 (376)
T KOG1372|consen  121 ------VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW  193 (376)
T ss_pred             ------EEeecccceeeccchhhhhHHHHHHhcCcccc-eeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence                  11111223345566677777666533322221 233222221  110 0  0    023456899999976544


Q ss_pred             HHHHHHHh---hcCCCeEEEEecch---hhhhHHHHHHhcCC-----------CcccccccCChhhHHHHHHHhhcC
Q psy6113         236 CALGMAEE---FKGDNIAVNALWPR---TAIYTAAIEMLTGG-----------SADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       236 l~~~la~e---~~~~gI~vn~v~PG---~~~~t~~~~~~~~~-----------~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      .+-.....   ++-.||-.|.=+|-   ..++....+.....           .-.....++.+.|-.++++.++..
T Consensus       194 ivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  194 IVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQ  270 (376)
T ss_pred             EEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhc
Confidence            44333333   35568999988884   11222222222111           011234467788888888777764

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.52  E-value=0.00031  Score=59.23  Aligned_cols=80  Identities=29%  Similarity=0.379  Sum_probs=54.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++++|+++|.|+ ||.|++++..|++.|++ |+++.|+.+++       ++.++.+  .+..+.++  ++.+..   + 
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra-------~~l~~~~--~~~~~~~~--~~~~~~---~-   71 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERA-------EALAEEF--GGVNIEAI--PLEDLE---E-   71 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHH-------HHHHHHH--TGCSEEEE--EGGGHC---H-
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHH-------HHHHHHc--Ccccccee--eHHHHH---H-
Confidence            4789999999998 89999999999999986 99999987652       2233333  12223333  333322   1 


Q ss_pred             HHHHHHhcCCccEEEeccccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISL  106 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~  106 (406)
                            .....|++||+.+....
T Consensus        72 ------~~~~~DivI~aT~~~~~   88 (135)
T PF01488_consen   72 ------ALQEADIVINATPSGMP   88 (135)
T ss_dssp             ------HHHTESEEEE-SSTTST
T ss_pred             ------HHhhCCeEEEecCCCCc
Confidence                  12368999999886543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.46  E-value=0.00051  Score=61.06  Aligned_cols=81  Identities=22%  Similarity=0.365  Sum_probs=49.9

Q ss_pred             cCCcEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeee
Q psy6113           7 LSGLTIFITGA----------------SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC   70 (406)
Q Consensus         7 l~gk~alVTGa----------------s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~   70 (406)
                      |+||.+|||+|                ||-.|.++|++++.+|++|+++.....- .               ....+  .
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~---------------~p~~~--~   62 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL-P---------------PPPGV--K   62 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------TTE--E
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-c---------------ccccc--e
Confidence            57999999988                5789999999999999999998776421 1               01122  2


Q ss_pred             eecCCChHHHHHHHHHHHHhcCCccEEEecccccccCC
Q psy6113          71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        71 ~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~  108 (406)
                      ..++.+.++..+.+.+   .+..-|++|++|++....+
T Consensus        63 ~i~v~sa~em~~~~~~---~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   63 VIRVESAEEMLEAVKE---LLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             EEE-SSHHHHHHHHHH---HGGGGSEEEE-SB--SEEE
T ss_pred             EEEecchhhhhhhhcc---ccCcceeEEEecchhheee
Confidence            3355566555555554   4445599999999876544

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN00106 malate dehydrogenase

Probab=97.43  E-value=0.0019  Score=62.59  Aligned_cols=152  Identities=16%  Similarity=0.160  Sum_probs=91.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..+.+.|||++|.+|..++..|+.++.  .+++++++.....         +.++.......  ...++++.++..    
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~---------a~Dl~~~~~~~--~i~~~~~~~d~~----   81 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV---------AADVSHINTPA--QVRGFLGDDQLG----   81 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee---------EchhhhCCcCc--eEEEEeCCCCHH----
Confidence            346899999999999999999998774  7999999772211         11222222211  222333332222    


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                         +.+...|++|+.||....                                                           
T Consensus        82 ---~~l~~aDiVVitAG~~~~-----------------------------------------------------------   99 (323)
T PLN00106         82 ---DALKGADLVIIPAGVPRK-----------------------------------------------------------   99 (323)
T ss_pred             ---HHcCCCCEEEEeCCCCCC-----------------------------------------------------------
Confidence               233468999999886432                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-----C------CCccCCchhhhHhhHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-----N------PFWFKNHVAYTISKYGMS  234 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-----~------~~~~~~~~~Y~asKaal~  234 (406)
                            +...+...+..|+.....+    .+.+.+.+..+||.++|.-..     .      ...++..-.|+.++.-..
T Consensus       100 ------~g~~R~dll~~N~~i~~~i----~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~  169 (323)
T PLN00106        100 ------PGMTRDDLFNINAGIVKTL----CEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVV  169 (323)
T ss_pred             ------CCCCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHH
Confidence                  1123566777777665554    444566655556666553332     1      111345567888876666


Q ss_pred             HHHHHHHHhhcC
Q psy6113         235 MCALGMAEEFKG  246 (406)
Q Consensus       235 ~l~~~la~e~~~  246 (406)
                      .|...+|.++.-
T Consensus       170 Rl~~~lA~~lgv  181 (323)
T PLN00106        170 RANTFVAEKKGL  181 (323)
T ss_pred             HHHHHHHHHhCC
Confidence            788888888753

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.36  E-value=0.00036  Score=69.54  Aligned_cols=75  Identities=27%  Similarity=0.462  Sum_probs=56.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      ++|.|+ |.+|+.+++.|++++-  +|++.+|+.++++          +.... .+.++.++++|+.|.+++.++++   
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~----------~~~~~~~~~~~~~~~~d~~~~~~l~~~~~---   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAE----------RLAEKLLGDRVEAVQVDVNDPESLAELLR---   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHH----------HHHT--TTTTEEEEE--TTTHHHHHHHHT---
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHH----------HHHhhccccceeEEEEecCCHHHHHHHHh---
Confidence            689999 9999999999999984  8999999976521          22222 56789999999999999888766   


Q ss_pred             HhcCCccEEEeccccc
Q psy6113          89 DKFGGIDILVNNASAI  104 (406)
Q Consensus        89 ~~~g~iD~linnAG~~  104 (406)
                          .-|++||++|..
T Consensus        67 ----~~dvVin~~gp~   78 (386)
T PF03435_consen   67 ----GCDVVINCAGPF   78 (386)
T ss_dssp             ----TSSEEEE-SSGG
T ss_pred             ----cCCEEEECCccc
Confidence                349999999964

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1203|consensus

Probab=97.31  E-value=0.0018  Score=63.96  Aligned_cols=44  Identities=16%  Similarity=0.262  Sum_probs=38.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      ....+-.+++|+||+|++|+-+++.|.++|..|...-|+.++..
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~  117 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAE  117 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhh
Confidence            34566789999999999999999999999999999999887643

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.30  E-value=0.0023  Score=62.01  Aligned_cols=80  Identities=16%  Similarity=0.276  Sum_probs=50.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++.+.+.|||++|.+|..++..|+.++  ..+++++++....+         +.++.+....  ....+.+++.+..+  
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~---------a~Dl~~~~~~--~~v~~~td~~~~~~--   72 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV---------AADLSHIDTP--AKVTGYADGELWEK--   72 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc---------ccchhhcCcC--ceEEEecCCCchHH--
Confidence            456789999999999999999999766  47999999322111         1223322222  22335555433211  


Q ss_pred             HHHHHhcCCccEEEeccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~  104 (406)
                           .....|++|++||..
T Consensus        73 -----~l~gaDvVVitaG~~   87 (321)
T PTZ00325         73 -----ALRGADLVLICAGVP   87 (321)
T ss_pred             -----HhCCCCEEEECCCCC
Confidence                 234678999988863

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.28  E-value=0.0025  Score=60.91  Aligned_cols=80  Identities=26%  Similarity=0.432  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+++++|.++++.+...|++|++++++.++           .+.+...+..   ..+|..+.+..+.+.+..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~---~~~~~~~~~~~~~~~~~~  209 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEG-----------AELVRQAGAD---AVFNYRAEDLADRILAAT  209 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCC---EEEeCCCcCHHHHHHHHc
Confidence            58999999999999999999999999999999887643           2223333432   224555554444433322


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       . .+++|++++++|.
T Consensus       210 -~-~~~~d~vi~~~~~  223 (325)
T cd08253         210 -A-GQGVDVIIEVLAN  223 (325)
T ss_pred             -C-CCceEEEEECCch
Confidence             1 2368999988873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.15  E-value=0.0047  Score=53.96  Aligned_cols=72  Identities=25%  Similarity=0.225  Sum_probs=58.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .+-|.||||-.|..++++..+||+.|+.+.|+..+....               ..+...+.|+.|++++.+.+.     
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------------~~~~i~q~Difd~~~~a~~l~-----   61 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------------QGVTILQKDIFDLTSLASDLA-----   61 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------------ccceeecccccChhhhHhhhc-----
Confidence            467899999999999999999999999999999875431               235567889999998755433     


Q ss_pred             cCCccEEEeccccc
Q psy6113          91 FGGIDILVNNASAI  104 (406)
Q Consensus        91 ~g~iD~linnAG~~  104 (406)
                        +.|++|..-|..
T Consensus        62 --g~DaVIsA~~~~   73 (211)
T COG2910          62 --GHDAVISAFGAG   73 (211)
T ss_pred             --CCceEEEeccCC
Confidence              679999887754

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.07  E-value=0.0017  Score=63.12  Aligned_cols=135  Identities=18%  Similarity=0.181  Sum_probs=80.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHc-C-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKD-G-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~-G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++++|+++||||+|.||..+|++|+++ | .+|++++|+.+++.       ....++.         ..|+.   +    
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~-------~La~el~---------~~~i~---~----  208 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQ-------ELQAELG---------GGKIL---S----  208 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHH-------HHHHHhc---------cccHH---h----
Confidence            689999999999999999999999865 6 48999999866422       2222221         11221   1    


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                         +.+.+...|++|+.++........   .+.       -..+.+.++..-+.++...+       ++-|+.+.+-|++
T Consensus       209 ---l~~~l~~aDiVv~~ts~~~~~~I~---~~~-------l~~~~~viDiAvPRDVd~~v-------~~~~V~v~~gG~V  268 (340)
T PRK14982        209 ---LEEALPEADIVVWVASMPKGVEID---PET-------LKKPCLMIDGGYPKNLDTKV-------QGPGIHVLKGGIV  268 (340)
T ss_pred             ---HHHHHccCCEEEECCcCCcCCcCC---HHH-------hCCCeEEEEecCCCCCCccc-------CCCCEEEEeCCcc
Confidence               123345689999999975432111   111       02456677665555554322       2467788888877


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARG  186 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g  186 (406)
                      ....  ++++ +++.+++.|...
T Consensus       269 ~~p~--~vd~-~l~~~v~~~~~~  288 (340)
T PRK14982        269 EHSL--DIDW-KIMEIAEMDNPQ  288 (340)
T ss_pred             ccCC--CcCc-cHHHHHhccchh
Confidence            4332  1111 344455555443

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=96.97  E-value=0.005  Score=59.88  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=29.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-------CeEEEEecCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDG-------ANIVIAAKTAE   44 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~G-------a~Vvl~~r~~~   44 (406)
                      .++||||+|.+|..++..|+..+       ..|++.+++..
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~   44 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA   44 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence            48999999999999999999855       58999999754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.92  E-value=0.016  Score=69.93  Aligned_cols=179  Identities=11%  Similarity=0.067  Sum_probs=115.2

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+.++.++|++.+++++.+++.+|.++|+.|+++..... ...          ........+-.+.+.-.+.+++..+++
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1820 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSH----------SASPLASAIASVTLGTIDDTSIEAVIK 1820 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccc----------cccccccccccccccccchHHHHHHHH
Confidence            356888999988999999999999999999887632211 000          001111222233455567788888888


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+....+.++.+||-.........                                                        
T Consensus      1821 ~~~~~~~~~~g~i~l~~~~~~~~~-------------------------------------------------------- 1844 (2582)
T TIGR02813      1821 DIEEKTAQIDGFIHLQPQHKSVAD-------------------------------------------------------- 1844 (2582)
T ss_pred             hhhccccccceEEEeccccccccc--------------------------------------------------------
Confidence            888888899999986664321000                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchh--------hhHhhHHHHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVA--------YTISKYGMSMCA  237 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~--------Y~asKaal~~l~  237 (406)
                          ..+.......-...+...|.+.|.+-+.+...+.+.++.++...|-.+.  .+...        -....+++.+|+
T Consensus      1845 ----~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~--~~~~~~~~~~~~~~~~~~a~l~Gl~ 1918 (2582)
T TIGR02813      1845 ----KVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGY--SNGDADSGTQQVKAELNQAALAGLT 1918 (2582)
T ss_pred             ----cccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCcccc--CCccccccccccccchhhhhHHHHH
Confidence                0000000111113455678888887777666666789999988766552  11111        123578999999


Q ss_pred             HHHHHhhcCCCeEEEEecch
Q psy6113         238 LGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG  257 (406)
                      |+++.|+-...+|...+.|.
T Consensus      1919 Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1919 KTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             HhHHHHCCCCeEEEEeCCCC
Confidence            99999998777788888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.91  E-value=0.0032  Score=54.02  Aligned_cols=77  Identities=27%  Similarity=0.410  Sum_probs=51.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++++++++|+|+ +++|+++++.|++.| .+|++.+|+.++.+       +..+++....     +..+.++.++.    
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~-------~~~~~~~~~~-----~~~~~~~~~~~----   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAK-------ALAERFGELG-----IAIAYLDLEEL----   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHH-------HHHHHHhhcc-----cceeecchhhc----
Confidence            467899999998 899999999999996 78999999866422       2222222110     22233343322    


Q ss_pred             HHHHHhcCCccEEEecccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAIS  105 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~  105 (406)
                            ....|++|++.....
T Consensus        79 ------~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 ------LAEADLIINTTPVGM   93 (155)
T ss_pred             ------cccCCEEEeCcCCCC
Confidence                  357899999987643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.86  E-value=0.0035  Score=59.32  Aligned_cols=75  Identities=25%  Similarity=0.355  Sum_probs=51.2

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .++|+++|+|+ +|+|++++..|++.|++|++.+|+.++.+       +..+++...+. ......|     +       
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~-------~la~~~~~~~~-~~~~~~~-----~-------  173 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE-------ELAERFQRYGE-IQAFSMD-----E-------  173 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHhhcCc-eEEechh-----h-------
Confidence            46899999999 59999999999999999999999876432       23344433221 2221111     1       


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                        ......|++||+.+..
T Consensus       174 --~~~~~~DivInatp~g  189 (270)
T TIGR00507       174 --LPLHRVDLIINATSAG  189 (270)
T ss_pred             --hcccCccEEEECCCCC
Confidence              0124689999999875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG4039|consensus

Probab=96.84  E-value=0.015  Score=50.60  Aligned_cols=81  Identities=15%  Similarity=0.160  Sum_probs=59.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .+++++.++|.||++--|..+.+++++.+-  +|+++.|+....++              .+..+.....|.+..++   
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------------t~k~v~q~~vDf~Kl~~---   76 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------------TDKVVAQVEVDFSKLSQ---   76 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------------ccceeeeEEechHHHHH---
Confidence            357788999999999999999999999984  89999998633221              23345555667655544   


Q ss_pred             HHHHHHHhcCCccEEEeccccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISL  106 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~  106 (406)
                          ..+.+.++|+++++-|....
T Consensus        77 ----~a~~~qg~dV~FcaLgTTRg   96 (238)
T KOG4039|consen   77 ----LATNEQGPDVLFCALGTTRG   96 (238)
T ss_pred             ----HHhhhcCCceEEEeeccccc
Confidence                33445689999999997654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.79  E-value=0.0035  Score=59.63  Aligned_cols=39  Identities=38%  Similarity=0.535  Sum_probs=35.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~   45 (406)
                      ++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~  159 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVER  159 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            578999999997 899999999999999 689999998765

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.70  E-value=0.0036  Score=63.41  Aligned_cols=82  Identities=21%  Similarity=0.224  Sum_probs=56.2

Q ss_pred             cccCCcEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeee
Q psy6113           5 GKLSGLTIFITGA----------------SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL   68 (406)
Q Consensus         5 ~~l~gk~alVTGa----------------s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~   68 (406)
                      .+|+||.+|||+|                ||-.|+++|+++..+|++|++++-.... .               ....+.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~---------------~p~~v~  315 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL-A---------------DPQGVK  315 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC-C---------------CCCCce
Confidence            4699999999988                5689999999999999999998643221 0               011122


Q ss_pred             eeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCC
Q psy6113          69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        69 ~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~  108 (406)
                      .+  .+.+   .+++.+.+.+.+. .|++|.+|++....+
T Consensus       316 ~i--~V~t---a~eM~~av~~~~~-~Di~I~aAAVaDyrp  349 (475)
T PRK13982        316 VI--HVES---ARQMLAAVEAALP-ADIAIFAAAVADWRV  349 (475)
T ss_pred             EE--EecC---HHHHHHHHHhhCC-CCEEEEeccccceee
Confidence            22  3444   4444555545454 699999999876544

>KOG2774|consensus

Probab=96.56  E-value=0.0049  Score=55.77  Aligned_cols=148  Identities=20%  Similarity=0.218  Sum_probs=94.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKD-GA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~-Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +--.++|||+-|-+|..+|..|-.+ |. .|++.+-......            +-.   .--++..|+-|..++++++-
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~------------V~~---~GPyIy~DILD~K~L~eIVV  107 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN------------VTD---VGPYIYLDILDQKSLEEIVV  107 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh------------hcc---cCCchhhhhhccccHHHhhc
Confidence            4567999999999999999988865 65 6777655443211            111   12356779988888877654


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .     .+||-|||-.+..+..+..                                                       
T Consensus       108 n-----~RIdWL~HfSALLSAvGE~-------------------------------------------------------  127 (366)
T KOG2774|consen  108 N-----KRIDWLVHFSALLSAVGET-------------------------------------------------------  127 (366)
T ss_pred             c-----cccceeeeHHHHHHHhccc-------------------------------------------------------
Confidence            2     4789888876654322211                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----cC------CchhhhHhhHHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----FK------NHVAYTISKYGMSM  235 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----~~------~~~~Y~asKaal~~  235 (406)
                               ..-...++|+.|.-++++.+..+    + -+|..-|.+.++.|-.    .|      ....|+.||--.+.
T Consensus       128 ---------NVpLA~~VNI~GvHNil~vAa~~----k-L~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL  193 (366)
T KOG2774|consen  128 ---------NVPLALQVNIRGVHNILQVAAKH----K-LKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAEL  193 (366)
T ss_pred             ---------CCceeeeecchhhhHHHHHHHHc----C-eeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHH
Confidence                     12235678999999998877332    2 3444444455444321    11      34679999988777


Q ss_pred             HHHHHHHhh
Q psy6113         236 CALGMAEEF  244 (406)
Q Consensus       236 l~~~la~e~  244 (406)
                      +-..+...+
T Consensus       194 ~GEy~~hrF  202 (366)
T KOG2774|consen  194 LGEYFNHRF  202 (366)
T ss_pred             HHHHHHhhc
Confidence            777776665

>PRK06849 hypothetical protein; Provisional

Probab=96.54  E-value=0.015  Score=58.03  Aligned_cols=83  Identities=20%  Similarity=0.223  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +.|++||||++.++|+.+++.|.++|++|++++.+....          .. ....-.+...+...-.+++...+.+.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~----------~~-~s~~~d~~~~~p~p~~d~~~~~~~L~~i   71 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL----------SR-FSRAVDGFYTIPSPRWDPDAYIQALLSI   71 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH----------HH-HHHhhhheEEeCCCCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999998875431          11 1111111222211223444444555555


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      .++. ++|++|....
T Consensus        72 ~~~~-~id~vIP~~e   85 (389)
T PRK06849         72 VQRE-NIDLLIPTCE   85 (389)
T ss_pred             HHHc-CCCEEEECCh
Confidence            5554 5899998765

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.53  E-value=0.01  Score=57.19  Aligned_cols=80  Identities=25%  Similarity=0.439  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.           +.+...+..   ...|..+.+..+.+.+..
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~  231 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKL-----------ERAKELGAD---YVIDYRKEDFVREVRELT  231 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-----------HHHHHcCCC---eEEecCChHHHHHHHHHh
Confidence            578999999999999999999999999999988876531           222223322   224666665555554433


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .  .+++|++++++|.
T Consensus       232 ~--~~~~d~~i~~~g~  245 (342)
T cd08266         232 G--KRGVDVVVEHVGA  245 (342)
T ss_pred             C--CCCCcEEEECCcH
Confidence            2  2469999999984

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.45  E-value=0.01  Score=57.12  Aligned_cols=75  Identities=24%  Similarity=0.446  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+.+++|+|+++++|+++++.+...|++|+.+.++.++           .+.+...+....   .|.   ++.   .+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~~~~~~---~~~---~~~---~~~~  221 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK-----------LKILKELGADYV---IDG---SKF---SEDV  221 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH-----------HHHHHHcCCcEE---Eec---HHH---HHHH
Confidence            47899999999999999999999999999998876543           222333343211   121   122   2222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       ....++|++++++|.
T Consensus       222 -~~~~~~d~v~~~~g~  236 (332)
T cd08259         222 -KKLGGADVVIELVGS  236 (332)
T ss_pred             -HhccCCCEEEECCCh
Confidence             233479999999984

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd00704 MDH Malate dehydrogenase

Probab=96.43  E-value=0.015  Score=56.40  Aligned_cols=33  Identities=21%  Similarity=0.269  Sum_probs=29.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTA   43 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~   43 (406)
                      .+.||||+|.+|..++..|+..|.       .+++.+++.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            478999999999999999998773       399999986

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.39  E-value=0.35  Score=45.43  Aligned_cols=95  Identities=23%  Similarity=0.295  Sum_probs=60.4

Q ss_pred             CcEEEEecCCchHHHHH--HHHHHHcCCeEEEEecCCCCCCCCccc--HH--HHHHHH-HHcCCeeeeeeecCCChHHHH
Q psy6113           9 GLTIFITGASRGIGKAI--ALKAAKDGANIVIAAKTAEPHPKLPGT--IY--SAAKEV-EDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         9 gk~alVTGas~GIG~ai--a~~La~~Ga~Vvl~~r~~~~~~~~~~~--i~--~~~~~~-~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      -|.+||.|+|+|.|++.  +.+|- .|++-+.+..-....+.-+++  .+  ....+. ...|--..-+..|.-+.+--+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            48899999999999984  44444 566655543222111111111  11  122222 233444566678888888889


Q ss_pred             HHHHHHHHhcCCccEEEeccccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~  104 (406)
                      ..++.+++.+|.+|.+|+.-+..
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp  142 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCc
Confidence            99999999999999999886543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.35  E-value=0.058  Score=52.74  Aligned_cols=117  Identities=15%  Similarity=0.265  Sum_probs=72.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCC--------------cccHHHHHHHHHHcCC--ee
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL--------------PGTIYSAAKEVEDAGG--NC   67 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~--------------~~~i~~~~~~~~~~g~--~~   67 (406)
                      .+|++++++|.|+ ||+|..+|+.|++.|. ++.++|++.-....+              ..+.+.+.+.+.+.+.  ++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            4678899999998 7899999999999998 899999875322111              1123334445554433  44


Q ss_pred             eeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHH
Q psy6113          68 LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAV  147 (406)
Q Consensus        68 ~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (406)
                      ..+..|++. +.++++       +...|++|.+..                                 ..+.+.+++...
T Consensus        99 ~~~~~~~~~-~~~~~~-------~~~~DlVid~~D---------------------------------~~~~r~~in~~~  137 (338)
T PRK12475         99 VPVVTDVTV-EELEEL-------VKEVDLIIDATD---------------------------------NFDTRLLINDLS  137 (338)
T ss_pred             EEEeccCCH-HHHHHH-------hcCCCEEEEcCC---------------------------------CHHHHHHHHHHH
Confidence            445555542 223222       234566666543                                 344566677777


Q ss_pred             hhcCCcceEecccccc
Q psy6113         148 DKFGGIDILVNNASAI  163 (406)
Q Consensus       148 ~~~g~id~li~~ag~~  163 (406)
                      ..++...+.....|..
T Consensus       138 ~~~~ip~i~~~~~g~~  153 (338)
T PRK12475        138 QKYNIPWIYGGCVGSY  153 (338)
T ss_pred             HHcCCCEEEEEecccE
Confidence            7777766665555543

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.35  E-value=0.021  Score=55.53  Aligned_cols=34  Identities=21%  Similarity=0.255  Sum_probs=29.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTAE   44 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~~   44 (406)
                      .+.|+|++|.+|..++..|+..|.       .++++++++.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~   41 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA   41 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc
Confidence            378999999999999999998664       4999998755

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05086 malate dehydrogenase; Provisional

Probab=96.31  E-value=0.014  Score=56.44  Aligned_cols=34  Identities=26%  Similarity=0.460  Sum_probs=27.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHH-c--CCeEEEEecCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAK-D--GANIVIAAKTA   43 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~-~--Ga~Vvl~~r~~   43 (406)
                      +.++|.||+|++|.+++..|.. .  +..+++.+|++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~   37 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP   37 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence            3589999999999999998865 2  34788888874

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.31  E-value=0.017  Score=54.99  Aligned_cols=80  Identities=23%  Similarity=0.399  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+++++|+|+++++|+++++.+...|++|++++++.++           .+.+...+..   ..++..+.+..+++.+ .
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~-----------~~~~~~~g~~---~~~~~~~~~~~~~~~~-~  203 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEK-----------LEACRALGAD---VAINYRTEDFAEEVKE-A  203 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHH-----------HHHHHHcCCC---EEEeCCchhHHHHHHH-H
Confidence            57899999999999999999999999999998886543           2223333432   2234444333333322 2


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .. .+++|++++++|.
T Consensus       204 ~~-~~~~d~vi~~~g~  218 (323)
T cd05276         204 TG-GRGVDVILDMVGG  218 (323)
T ss_pred             hC-CCCeEEEEECCch
Confidence            11 2469999999984

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.27  E-value=0.052  Score=55.78  Aligned_cols=85  Identities=22%  Similarity=0.291  Sum_probs=55.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh--------
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE--------   77 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~--------   77 (406)
                      ...+.+++|+|+ |.+|+..+..+...|++|+++++++++           .+..++.|.+...  .|..+.        
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~r-----------le~aeslGA~~v~--i~~~e~~~~~~gya  227 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEV-----------AEQVESMGAEFLE--LDFEEEGGSGDGYA  227 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCeEEE--eccccccccccchh
Confidence            346889999998 789999999999999999999998764           3344556665332  232221        


Q ss_pred             -----HHHHHHHHHHHHhcCCccEEEeccccc
Q psy6113          78 -----HAVQSAVNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        78 -----~~v~~~~~~i~~~~g~iD~linnAG~~  104 (406)
                           +..++..+.+.+..+..|++|+++|+.
T Consensus       228 ~~~s~~~~~~~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        228 KVMSEEFIKAEMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             hhcchhHHHHHHHHHHhccCCCCEEEECCCCC
Confidence                 111111222222235689999998864

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.26  E-value=0.017  Score=55.02  Aligned_cols=40  Identities=23%  Similarity=0.181  Sum_probs=35.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH   46 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~   46 (406)
                      ++++|.++|.|+ ||.|++++..|++.|+ +|++++|+.++.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka  164 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARA  164 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            467899999998 7899999999999998 799999987653

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.26  E-value=0.0062  Score=45.13  Aligned_cols=38  Identities=32%  Similarity=0.441  Sum_probs=23.8

Q ss_pred             ccCC-cEEEEecCCchHHHH--HHHHHHHcCCeEEEEecCCC
Q psy6113           6 KLSG-LTIFITGASRGIGKA--IALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         6 ~l~g-k~alVTGas~GIG~a--ia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++| |++||+|+|+|.|+|  |+..| ..|++.+.++...+
T Consensus        35 ~~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk~   75 (78)
T PF12242_consen   35 KINGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEKP   75 (78)
T ss_dssp             --TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE----
T ss_pred             CCCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeeccC
Confidence            3456 899999999999999  55555 67888887766543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.25  E-value=0.013  Score=56.66  Aligned_cols=80  Identities=19%  Similarity=0.290  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|+|+++++|.+.++.+...|++|+.++++.++           .+.+.+.|....+   |-.+.+...+.+...
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~-----------~~~~~~lGa~~vi---~~~~~~~~~~~~~~~  203 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK-----------VAYLKKLGFDVAF---NYKTVKSLEETLKKA  203 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCCEEE---eccccccHHHHHHHh
Confidence            58899999999999999998888889999988877653           2334445543222   333323333333333


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .  -+++|+++.+.|.
T Consensus       204 ~--~~gvdvv~d~~G~  217 (325)
T TIGR02825       204 S--PDGYDCYFDNVGG  217 (325)
T ss_pred             C--CCCeEEEEECCCH
Confidence            2  1469999999884

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.17  E-value=0.016  Score=56.33  Aligned_cols=80  Identities=24%  Similarity=0.388  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+++++|.++++.+...|++|+.++++.++           .+.+.+ .|....   .|-.+.++..+.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~-----------~~~~~~~lGa~~v---i~~~~~~~~~~~i~~  216 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK-----------VDLLKNKLGFDDA---FNYKEEPDLDAALKR  216 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHhcCCcee---EEcCCcccHHHHHHH
Confidence            58999999999999999999888899999988877653           223333 444221   232222233333333


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      ...  +++|+++.+.|.
T Consensus       217 ~~~--~gvd~v~d~~g~  231 (338)
T cd08295         217 YFP--NGIDIYFDNVGG  231 (338)
T ss_pred             hCC--CCcEEEEECCCH
Confidence            321  479999999883

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.09  E-value=0.0074  Score=54.46  Aligned_cols=40  Identities=28%  Similarity=0.477  Sum_probs=36.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~   62 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEE   62 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            457899999999996 8999999999999999999988754

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>KOG1198|consensus

Probab=96.01  E-value=0.037  Score=54.24  Aligned_cols=79  Identities=27%  Similarity=0.405  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|+.+||.||++|.|.+.++-....|+..+++.++.+.           .+.++..|...   ..|-.+++-    ++++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-----------~~l~k~lGAd~---vvdy~~~~~----~e~~  218 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-----------LELVKKLGADE---VVDYKDENV----VELI  218 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-----------HHHHHHcCCcE---eecCCCHHH----HHHH
Confidence            58899999999999999999888899655555555553           33445555433   236666333    3333


Q ss_pred             HHh-cCCccEEEeccccc
Q psy6113          88 VDK-FGGIDILVNNASAI  104 (406)
Q Consensus        88 ~~~-~g~iD~linnAG~~  104 (406)
                      .+. .+++|+++-|+|..
T Consensus       219 kk~~~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  219 KKYTGKGVDVVLDCVGGS  236 (347)
T ss_pred             HhhcCCCccEEEECCCCC
Confidence            332 57899999999964

>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=95.96  E-value=0.019  Score=57.05  Aligned_cols=72  Identities=22%  Similarity=0.352  Sum_probs=61.8

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGA  401 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~  401 (406)
                      ...|.+.++++.-.-.++..++.+|.|+|++..+|..+..|+..-+.....||+||.||-..-..|-.+|+.
T Consensus       573 ~e~f~l~L~n~~L~~~k~~q~e~~daT~ti~ra~~~~~l~~~~s~~~~v~~~~~ki~Gn~~~l~~l~~~ld~  644 (655)
T COG2015         573 DENFLLTLRNSVLNYRKGLQSEAADATVTIDRADLLAVLAGGTSMVDLVKSGKAKIEGNRAALEELLGMLDN  644 (655)
T ss_pred             CceEEEEeecceeecccCCCCCCCCceEEEcHHHHHHHHhCCcchHHHHhCCcceEecCHHHHHHHHHHhcC
Confidence            346999999987776777777778999999999999999999999999999999999997766666666654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.96  E-value=0.15  Score=48.03  Aligned_cols=40  Identities=20%  Similarity=0.246  Sum_probs=34.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      .+|++..++|.|+ ||+|..+|+.|++.|. ++.+++.+.-.
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~   66 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVC   66 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEec
Confidence            4678899999988 7999999999999995 89999876543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.87  E-value=0.03  Score=53.47  Aligned_cols=39  Identities=21%  Similarity=0.335  Sum_probs=35.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.||+++|.|. |++|+++|+.|...|++|++.+|+.+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~  185 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSA  185 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3688999999999 66999999999999999999999865

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.87  E-value=0.0075  Score=62.61  Aligned_cols=39  Identities=44%  Similarity=0.622  Sum_probs=35.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ++++|+++|+|+ +|+|++++..|+++|++|++++|+.++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~  414 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYER  414 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            578999999999 599999999999999999999997654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.86  E-value=0.022  Score=53.98  Aligned_cols=79  Identities=24%  Similarity=0.385  Sum_probs=53.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +.+|+.++|.|| ||-+++++..|++.|+ +|+++.|+.++.+       +.++.+.+.+..+..  .+..+.+..+   
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~-------~La~~~~~~~~~~~~--~~~~~~~~~~---  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAE-------ELADLFGELGAAVEA--AALADLEGLE---  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-------HHHHHhhhccccccc--cccccccccc---
Confidence            446899999998 7899999999999995 7999999988643       344444444432111  2222222111   


Q ss_pred             HHHHHhcCCccEEEecccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAIS  105 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~  105 (406)
                              ..|++||+....-
T Consensus       190 --------~~dliINaTp~Gm  202 (283)
T COG0169         190 --------EADLLINATPVGM  202 (283)
T ss_pred             --------ccCEEEECCCCCC
Confidence                    4799999976643

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.81  E-value=0.028  Score=55.22  Aligned_cols=80  Identities=21%  Similarity=0.336  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+++++|...++.+...|++|+.++++.++           .+.+. ..|....+   |-.+.++..+.+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k-----------~~~~~~~lGa~~vi---~~~~~~~~~~~i~~  223 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-----------VDLLKNKLGFDEAF---NYKEEPDLDAALKR  223 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH-----------HHHHHHhcCCCEEE---ECCCcccHHHHHHH
Confidence            58999999999999999998888899999988776553           22232 34543222   32222233333333


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      ..  -+++|+++.+.|.
T Consensus       224 ~~--~~gvD~v~d~vG~  238 (348)
T PLN03154        224 YF--PEGIDIYFDNVGG  238 (348)
T ss_pred             HC--CCCcEEEEECCCH
Confidence            22  1469999999983

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.79  E-value=0.037  Score=53.87  Aligned_cols=77  Identities=25%  Similarity=0.464  Sum_probs=53.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||+||+||+|...++-....|++++++..+.++           .+.+.+.|.....   |..+.+    +.+++.
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k-----------~~~~~~lGAd~vi---~y~~~~----~~~~v~  204 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEK-----------LELLKELGADHVI---NYREED----FVEQVR  204 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH-----------HHHHHhcCCCEEE---cCCccc----HHHHHH
Confidence            8999999999999999999999999776666555442           2255666654332   233333    455555


Q ss_pred             HhcC--CccEEEecccc
Q psy6113          89 DKFG--GIDILVNNASA  103 (406)
Q Consensus        89 ~~~g--~iD~linnAG~  103 (406)
                      +..+  ++|+++...|.
T Consensus       205 ~~t~g~gvDvv~D~vG~  221 (326)
T COG0604         205 ELTGGKGVDVVLDTVGG  221 (326)
T ss_pred             HHcCCCCceEEEECCCH
Confidence            4443  59999999985

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.77  E-value=0.029  Score=54.60  Aligned_cols=78  Identities=15%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |++++|+||++++|.+.++.+...|+ +|+.++++.++           .+.+.+ .|....+   |..+. +..+.+.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~-----------~~~~~~~lGa~~vi---~~~~~-~~~~~i~~  219 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEK-----------CQLLKSELGFDAAI---NYKTD-NVAERLRE  219 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHH-----------HHHHHHhcCCcEEE---ECCCC-CHHHHHHH
Confidence            38999999999999999988888898 79988877653           222222 4543222   22222 22233333


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +. . +++|++++++|.
T Consensus       220 ~~-~-~gvd~vid~~g~  234 (345)
T cd08293         220 LC-P-EGVDVYFDNVGG  234 (345)
T ss_pred             HC-C-CCceEEEECCCc
Confidence            32 1 479999999884

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.72  E-value=0.036  Score=51.43  Aligned_cols=79  Identities=20%  Similarity=0.410  Sum_probs=53.2

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ..|++++|+|+++ +|+++++.+...|.+|++++++.++           .+.+...+...   ..|..+.+..+.+.  
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~---~~~~~~~~~~~~~~--  195 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEK-----------LELAKELGADH---VIDYKEEDLEEELR--  195 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHH-----------HHHHHHhCCce---eccCCcCCHHHHHH--
Confidence            3688999999988 9999999999999999999887543           22233334222   12444443333333  


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                       ....+++|++++++|.
T Consensus       196 -~~~~~~~d~vi~~~~~  211 (271)
T cd05188         196 -LTGGGGADVVIDAVGG  211 (271)
T ss_pred             -HhcCCCCCEEEECCCC
Confidence             2234579999999884

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.69  E-value=0.1  Score=48.16  Aligned_cols=39  Identities=21%  Similarity=0.308  Sum_probs=33.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~   44 (406)
                      .+|++..++|.|. ||+|..+++.|++.|. +++++|.+.-
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V   46 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVV   46 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEE
Confidence            4678899999988 7999999999999997 8999887653

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.65  E-value=0.051  Score=52.78  Aligned_cols=35  Identities=17%  Similarity=0.289  Sum_probs=30.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTAE   44 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~~   44 (406)
                      +.+.|+|++|.+|..++..|+..|.       .+++++.++.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~   44 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQA   44 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCc
Confidence            5689999999999999999998885       6999998653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.60  E-value=0.22  Score=44.89  Aligned_cols=38  Identities=34%  Similarity=0.491  Sum_probs=33.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++++++|.|+ ||+|..+++.|++.|. ++.++|++.
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~   55 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDH   55 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence            4688999999996 7999999999999997 899998874

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.59  E-value=0.048  Score=54.82  Aligned_cols=40  Identities=23%  Similarity=0.341  Sum_probs=35.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      .+++||.++|.|+ ||+|+.++..|+++|+ +++++.|+.++
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~r  217 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEK  217 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence            3688999999999 9999999999999996 79999998664

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.58  E-value=0.046  Score=52.66  Aligned_cols=79  Identities=18%  Similarity=0.343  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|+||++++|.+.++.+...|++|+.++++.++           .+.+++.|.+..   .|-.+++..++ +.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~-----------~~~l~~~Ga~~v---i~~~~~~~~~~-v~~~  207 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDK-----------VAWLKELGFDAV---FNYKTVSLEEA-LKEA  207 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCCEE---EeCCCccHHHH-HHHH
Confidence            58899999999999999988888899999988877653           333444554322   23333322222 2222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      . . +++|+++.+.|.
T Consensus       208 ~-~-~gvd~vld~~g~  221 (329)
T cd08294         208 A-P-DGIDCYFDNVGG  221 (329)
T ss_pred             C-C-CCcEEEEECCCH
Confidence            1 1 469999998883

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.49  E-value=0.062  Score=50.37  Aligned_cols=74  Identities=22%  Similarity=0.302  Sum_probs=54.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .++|+|||+- |+.++++|.++|++|++..++....+.+           ...+  ...+..+.-+.+++.+++.+    
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~-----------~~~g--~~~v~~g~l~~~~l~~~l~~----   63 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLY-----------PIHQ--ALTVHTGALDPQELREFLKR----   63 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccc-----------cccC--CceEEECCCCHHHHHHHHHh----
Confidence            5899999997 9999999999999999998887653321           1222  23445677777777666653    


Q ss_pred             cCCccEEEecccc
Q psy6113          91 FGGIDILVNNASA  103 (406)
Q Consensus        91 ~g~iD~linnAG~  103 (406)
                       .++|++|+.+..
T Consensus        64 -~~i~~VIDAtHP   75 (256)
T TIGR00715        64 -HSIDILVDATHP   75 (256)
T ss_pred             -cCCCEEEEcCCH
Confidence             379999998774

This enzyme was found to be a monomer by gel filtration.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.48  E-value=0.033  Score=57.09  Aligned_cols=39  Identities=36%  Similarity=0.479  Sum_probs=34.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~  367 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAH  367 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            568899999997 699999999999999999999887653

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.44  E-value=0.047  Score=51.98  Aligned_cols=40  Identities=20%  Similarity=0.311  Sum_probs=35.1

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH   46 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~   46 (406)
                      ++++|.++|.|+ ||-+++++..|++.|+ +|+++.|+.++.
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka  164 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA  164 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH
Confidence            467899999998 8999999999999997 788999987653

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.43  E-value=0.061  Score=51.62  Aligned_cols=38  Identities=21%  Similarity=0.396  Sum_probs=34.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ++.+++++|.|. |++|+.++..|...|++|++.+|+.+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~  186 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSA  186 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            567999999998 67999999999999999999999854

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.42  E-value=0.05  Score=47.60  Aligned_cols=39  Identities=21%  Similarity=0.336  Sum_probs=34.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .+|.||.++|.|++.=.|..+++.|.++|++|+++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999966679999999999999999988863

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=95.40  E-value=0.096  Score=50.08  Aligned_cols=102  Identities=16%  Similarity=0.192  Sum_probs=70.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ...+|-||++--|.-+|++|+++|.+.++.+|+..++..          .-...|.+...+.+.+  ++.++++++    
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~----------l~~~LG~~~~~~p~~~--p~~~~~~~~----   70 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDA----------LRASLGPEAAVFPLGV--PAALEAMAS----   70 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHH----------HHHhcCccccccCCCC--HHHHHHHHh----
Confidence            458999999999999999999999999999999876332          2233466666665555  555555544    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhh
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLE  138 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (406)
                         +.++|+||+|.......        ..+..--..|+-+.+.+-+..
T Consensus        71 ---~~~VVlncvGPyt~~g~--------plv~aC~~~GTdY~DiTGEi~  108 (382)
T COG3268          71 ---RTQVVLNCVGPYTRYGE--------PLVAACAAAGTDYADITGEIM  108 (382)
T ss_pred             ---cceEEEecccccccccc--------HHHHHHHHhCCCeeeccccHH
Confidence               67999999997654332        133333445677777665443

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.39  E-value=0.064  Score=51.12  Aligned_cols=80  Identities=24%  Similarity=0.392  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+++++|.++++.+...|++|+++.++.++           .+.+...+.+.   ..+....+....+.. .
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~---~~~~~~~~~~~~~~~-~  203 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEK-----------CAACEALGADI---AINYREEDFVEVVKA-E  203 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCcE---EEecCchhHHHHHHH-H
Confidence            57899999999999999999999999999998887543           12223333221   123333333333222 1


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .. .+++|++|+++|.
T Consensus       204 ~~-~~~~d~~i~~~~~  218 (325)
T TIGR02824       204 TG-GKGVDVILDIVGG  218 (325)
T ss_pred             cC-CCCeEEEEECCch
Confidence            11 1369999999883

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.37  E-value=0.094  Score=51.98  Aligned_cols=77  Identities=18%  Similarity=0.227  Sum_probs=52.1

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+.++.++|.|+ |.+|+..++.+...|++|++++|+.+++           +.+.. .+..   +..+..+.+.+.+.+
T Consensus       164 ~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~-----------~~l~~~~g~~---v~~~~~~~~~l~~~l  228 (370)
T TIGR00518       164 GVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL-----------RQLDAEFGGR---IHTRYSNAYEIEDAV  228 (370)
T ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-----------HHHHHhcCce---eEeccCCHHHHHHHH
Confidence            356777999988 7899999999999999999999876532           22222 2222   223444555443332


Q ss_pred             HHHHHhcCCccEEEeccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~  104 (406)
                             ...|++|+++++.
T Consensus       229 -------~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 -------KRADLLIGAVLIP  241 (370)
T ss_pred             -------ccCCEEEEccccC
Confidence                   3579999998763

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.35  E-value=0.08  Score=53.82  Aligned_cols=134  Identities=16%  Similarity=0.208  Sum_probs=75.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++.+|+++|+|.+ |+|.++|+.|+++|++|++.+......         ...+++.....+.+..... +..       
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~---------~~~~l~~~~~gi~~~~g~~-~~~-------   63 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE---------RVAQIGKMFDGLVFYTGRL-KDA-------   63 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch---------hHHHHhhccCCcEEEeCCC-CHH-------
Confidence            4779999999986 999999999999999999998765421         1122333211222222111 111       


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCC------Ch-hhhhhhhhh-cc--ccceEEeccchhhH-HHHHHHHHhhcCCcc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANT------PL-KKYDLMNQI-NA--RGTYLVKASQGLEI-QSAVNAAVDKFGGID  154 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~------~~-~~~~~~~~~-~~--~~~~~~~~~~~~~~-~~~~~~~~~~~g~id  154 (406)
                          .+...|++|...|+....+....      +. .+.+...++ +.  ...+-++-+.+.+. ...+.++++..|+--
T Consensus        64 ----~~~~~d~vv~spgi~~~~p~~~~a~~~~i~v~~~~~~~~~~~~~~~~~~I~ITGT~GKTTTt~li~~iL~~~g~~~  139 (445)
T PRK04308         64 ----LDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDT  139 (445)
T ss_pred             ----HHhCCCEEEECCCCCCCCHHHHHHHHcCCcEEEhHHHHHHhhhcCCCCEEEEECCCcHHHHHHHHHHHHHHcCCCe
Confidence                11357999999998754332100      00 000111111 11  12445566666664 677777777766544


Q ss_pred             eEecccc
Q psy6113         155 ILVNNAS  161 (406)
Q Consensus       155 ~li~~ag  161 (406)
                      .+..|-|
T Consensus       140 ~~~GniG  146 (445)
T PRK04308        140 VIAGNIG  146 (445)
T ss_pred             EEeCCcc
Confidence            5555554

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.29  E-value=0.069  Score=52.16  Aligned_cols=77  Identities=22%  Similarity=0.324  Sum_probs=51.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..|++++|+|+ +++|...++.+...|+ +|+++++++++           .+...+.|....   .|..+. ++.+   
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~-----------~~~a~~lGa~~v---i~~~~~-~~~~---  228 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRS-----------LSLAREMGADKL---VNPQND-DLDH---  228 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHH-----------HHHHHHcCCcEE---ecCCcc-cHHH---
Confidence            46899999986 8999999988888898 58888887654           223344554332   233332 2222   


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                       +.+..+.+|++|.++|.
T Consensus       229 -~~~~~g~~D~vid~~G~  245 (343)
T PRK09880        229 -YKAEKGYFDVSFEVSGH  245 (343)
T ss_pred             -HhccCCCCCEEEECCCC
Confidence             22233569999999984

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.26  E-value=0.075  Score=51.53  Aligned_cols=73  Identities=18%  Similarity=0.325  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|.+ |+|...++.....|++|+.++|+++++           +..++.|....+   +-++++..+.+-+  
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~-----------e~a~~lGAd~~i---~~~~~~~~~~~~~--  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKL-----------ELAKKLGADHVI---NSSDSDALEAVKE--  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHH-----------HHHHHhCCcEEE---EcCCchhhHHhHh--
Confidence            48999999998 999988888777999999999998863           334455655433   3334444444333  


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                           ..|++|+.++
T Consensus       229 -----~~d~ii~tv~  238 (339)
T COG1064         229 -----IADAIIDTVG  238 (339)
T ss_pred             -----hCcEEEECCC
Confidence                 1899999998

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.19  E-value=0.053  Score=51.64  Aligned_cols=40  Identities=23%  Similarity=0.395  Sum_probs=35.2

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH   46 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~   46 (406)
                      ++++|.++|.|+ ||.+++++..|++.|+ +|+++.|+.++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka  162 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKL  162 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            467999999987 8999999999999997 799999987653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.15  E-value=0.27  Score=47.42  Aligned_cols=37  Identities=22%  Similarity=0.383  Sum_probs=31.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPK   48 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~   48 (406)
                      .+.|.|+ |++|.++|..|+..|  .+|++++|+.++.+.
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~   40 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEG   40 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhH
Confidence            5778886 899999999999999  489999999876543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.08  E-value=0.22  Score=44.90  Aligned_cols=37  Identities=27%  Similarity=0.322  Sum_probs=33.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      .+++||.++|.|| |.+|...++.|.+.|++|+++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            5789999999999 889999999999999999999764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.00  E-value=0.067  Score=50.89  Aligned_cols=37  Identities=24%  Similarity=0.353  Sum_probs=33.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK   41 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r   41 (406)
                      .+++||.++|.|+++=.|++++..|.++|++|.++.|
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            3689999999999877999999999999999998876

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.98  E-value=0.45  Score=48.08  Aligned_cols=39  Identities=33%  Similarity=0.561  Sum_probs=34.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++.+++++|.|+ |++|+.+++.|...|+ +|++.+|+.++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~r  218 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLER  218 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHH
Confidence            578999999987 9999999999999997 79999998754

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.95  E-value=0.092  Score=50.09  Aligned_cols=37  Identities=32%  Similarity=0.483  Sum_probs=33.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ++++++|+|+++++|+++++.+...|++|++++++.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~  180 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSE  180 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence            5789999999999999999999999999999988754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.88  E-value=0.11  Score=49.51  Aligned_cols=38  Identities=29%  Similarity=0.476  Sum_probs=33.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAE   44 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~   44 (406)
                      ++++|+++|.|+ ||-+++++..|+..|+ +|+++.|+.+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~  159 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE  159 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence            578999999998 6669999999999997 8999999865

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.83  E-value=0.2  Score=45.09  Aligned_cols=37  Identities=27%  Similarity=0.503  Sum_probs=33.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKT   42 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~   42 (406)
                      .+|+.++++|.|+ ||+|..+|..|++.|. +|+++|++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3678899999999 7899999999999998 79999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.82  E-value=0.31  Score=50.07  Aligned_cols=83  Identities=18%  Similarity=0.238  Sum_probs=54.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC----------
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD----------   76 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~----------   76 (406)
                      ..+.+++|.|+ |.+|+..+..+...|++|++++++.++           .+..+..|.+.  +..|..+          
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~r-----------le~a~~lGa~~--v~v~~~e~g~~~~gYa~  227 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEV-----------KEQVQSMGAEF--LELDFKEEGGSGDGYAK  227 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCeE--Eecccccccccccccee
Confidence            45678999997 899999999999999999999888764           23334445433  3344321          


Q ss_pred             ---hHHHHHHHHHHHHhcCCccEEEecccc
Q psy6113          77 ---EHAVQSAVNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        77 ---~~~v~~~~~~i~~~~g~iD~linnAG~  103 (406)
                         .+..+...+.+.+.....|++|+++-+
T Consensus       228 ~~s~~~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       228 VMSEEFIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             ecCHHHHHHHHHHHHHHhCCCCEEEECccc
Confidence               233333334444455667888777743

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=94.69  E-value=0.13  Score=49.52  Aligned_cols=79  Identities=20%  Similarity=0.349  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+++++|.++++.+.+.|++|+.++++.++           .+.+.+ .+...   ..|..+.+..+. +.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~-----------~~~~~~~~g~~~---~~~~~~~~~~~~-v~~  209 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEK-----------CRWLVEELGFDA---AINYKTPDLAEA-LKE  209 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHhhcCCce---EEecCChhHHHH-HHH
Confidence            57899999999999999999999999999988876643           222333 33321   123333332222 222


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      .. . +++|++++++|.
T Consensus       210 ~~-~-~~~d~vi~~~g~  224 (329)
T cd05288         210 AA-P-DGIDVYFDNVGG  224 (329)
T ss_pred             hc-c-CCceEEEEcchH
Confidence            22 1 579999999884

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=94.65  E-value=0.75  Score=44.54  Aligned_cols=42  Identities=19%  Similarity=0.268  Sum_probs=35.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHP   47 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~   47 (406)
                      ++=+++.+.|+|+ |++|.++|..|+..|.  .+++.+++.+++.
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~   45 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAE   45 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhH
Confidence            3446788999998 9999999999999996  7999999877643

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.53  E-value=0.093  Score=48.24  Aligned_cols=74  Identities=24%  Similarity=0.366  Sum_probs=53.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .++|.|+ |-+|+.+|+.|.++|++|+++++++++.           .+..+.-.....+..|-++++.++++      -
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~-----------~~~~~~~~~~~~v~gd~t~~~~L~~a------g   63 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERV-----------EEFLADELDTHVVIGDATDEDVLEEA------G   63 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHH-----------HHHhhhhcceEEEEecCCCHHHHHhc------C
Confidence            5677777 6689999999999999999999998752           22222123467788999999877664      1


Q ss_pred             cCCccEEEeccc
Q psy6113          91 FGGIDILVNNAS  102 (406)
Q Consensus        91 ~g~iD~linnAG  102 (406)
                      ....|++|...|
T Consensus        64 i~~aD~vva~t~   75 (225)
T COG0569          64 IDDADAVVAATG   75 (225)
T ss_pred             CCcCCEEEEeeC
Confidence            125677776655

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.50  E-value=0.24  Score=46.16  Aligned_cols=38  Identities=21%  Similarity=0.359  Sum_probs=33.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++++++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            4678899999998 9999999999999997 788887654

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.49  E-value=0.76  Score=44.36  Aligned_cols=33  Identities=33%  Similarity=0.450  Sum_probs=29.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEecCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAKTA   43 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~   43 (406)
                      .+.|+|++|.+|..++..|+..|.  .|++++|+.
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            578999999999999999999996  499999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.48  E-value=0.48  Score=46.35  Aligned_cols=38  Identities=26%  Similarity=0.381  Sum_probs=34.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|+.++++|.|+ ||+|..+|+.|++.|. ++.+++++.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            4678899999999 8999999999999998 899999875

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.36  E-value=0.17  Score=48.71  Aligned_cols=79  Identities=19%  Similarity=0.343  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+++++|.++++.....|++|+.+.++.++           .+.+...+....   .+..+. +..+.+.+.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~v---~~~~~~-~~~~~~~~~  203 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEK-----------AEFLKSLGCDRP---INYKTE-DLGEVLKKE  203 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHH-----------HHHHHHcCCceE---EeCCCc-cHHHHHHHh
Confidence            57899999999999999999888999999998877653           223334443211   232222 222333332


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      ..  +.+|+++++.|.
T Consensus       204 ~~--~~vd~v~~~~g~  217 (329)
T cd08250         204 YP--KGVDVVYESVGG  217 (329)
T ss_pred             cC--CCCeEEEECCcH
Confidence            22  469999998873

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.31  E-value=0.15  Score=41.28  Aligned_cols=58  Identities=24%  Similarity=0.412  Sum_probs=44.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++.           .+++...+  +.++..|.++++..+++
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~-----------~~~~~~~~--~~~i~gd~~~~~~l~~a   58 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPER-----------VEELREEG--VEVIYGDATDPEVLERA   58 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHH-----------HHHHHHTT--SEEEES-TTSHHHHHHT
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHH-----------HHHHHhcc--cccccccchhhhHHhhc
Confidence            4677874 79999999999977799999998753           45555555  66888999999987664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.29  E-value=0.18  Score=49.78  Aligned_cols=79  Identities=22%  Similarity=0.303  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|.+++|+|+ ++||...++.+...|+ +|+.++++.++           .+...+.|...   ..|..+ .+++.+.+.
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~-----------~~~a~~~Ga~~---~i~~~~~~~~~~~~v~  249 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAK-----------FELAKKLGATD---CVNPNDYDKPIQEVIV  249 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHhCCCe---EEcccccchhHHHHHH
Confidence            4889999985 8999999998888898 79888887654           22233445432   223332 223333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +++|++|.++|.
T Consensus       250 ~~~~--~g~d~vid~~G~  265 (368)
T TIGR02818       250 EITD--GGVDYSFECIGN  265 (368)
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3322  379999999984

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02740 Alcohol dehydrogenase-like

Probab=94.25  E-value=0.2  Score=49.72  Aligned_cols=79  Identities=23%  Similarity=0.351  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~   85 (406)
                      .|++++|.|+ +++|...++.+...|+ +|++++++.+++           +..++.|....   .|..+. ++..+.+.
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~-----------~~a~~~Ga~~~---i~~~~~~~~~~~~v~  262 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKF-----------EKGKEMGITDF---INPKDSDKPVHERIR  262 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHH-----------HHHHHcCCcEE---EecccccchHHHHHH
Confidence            4889999986 8999999998889999 699888876642           22334454321   233332 12333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +.+|++|.++|.
T Consensus       263 ~~~~--~g~dvvid~~G~  278 (381)
T PLN02740        263 EMTG--GGVDYSFECAGN  278 (381)
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3322  269999999994

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.15  E-value=0.21  Score=50.10  Aligned_cols=39  Identities=18%  Similarity=0.315  Sum_probs=35.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+.|++++|.|+ |.||+.+++.+...|++|+++++++.+
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R  237 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPIC  237 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhh
Confidence            368999999999 479999999999999999999888765

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=94.12  E-value=0.46  Score=45.06  Aligned_cols=78  Identities=23%  Similarity=0.340  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.|++|++|++..|.-..+----.|++||.++-..++           ++-+.+ .|...   ..|-..+    .+.+.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK-----------~~~l~~~lGfD~---~idyk~~----d~~~~  211 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEK-----------CDFLTEELGFDA---GIDYKAE----DFAQA  211 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHH-----------HHHHHHhcCCce---eeecCcc----cHHHH
Confidence            49999999999999987666555679999998877765           222333 23221   1233333    34444


Q ss_pred             HHHhc-CCccEEEecccc
Q psy6113          87 AVDKF-GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~-g~iD~linnAG~  103 (406)
                      +.+.. .+||+.+-|.|-
T Consensus       212 L~~a~P~GIDvyfeNVGg  229 (340)
T COG2130         212 LKEACPKGIDVYFENVGG  229 (340)
T ss_pred             HHHHCCCCeEEEEEcCCc
Confidence            44444 479999999983

>PRK14968 putative methyltransferase; Provisional

Probab=94.07  E-value=0.35  Score=42.48  Aligned_cols=77  Identities=18%  Similarity=0.171  Sum_probs=49.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCe---eeeeeecCCChHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN---CLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~---~~~~~~Dl~~~~~v~~~   83 (406)
                      .++++++-.|++.|.   ++..+++++.+|+.++++++..       +.+.+.+...+.+   +.++.+|+.+.      
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~-------~~a~~~~~~~~~~~~~~~~~~~d~~~~------   85 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAV-------ECAKCNAKLNNIRNNGVEVIRSDLFEP------   85 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHH-------HHHHHHHHHcCCCCcceEEEecccccc------
Confidence            367889999988876   6677777799999999886542       2233333333322   66777776442      


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                         ..+  +.+|+++.|....
T Consensus        86 ---~~~--~~~d~vi~n~p~~  101 (188)
T PRK14968         86 ---FRG--DKFDVILFNPPYL  101 (188)
T ss_pred             ---ccc--cCceEEEECCCcC
Confidence               111  2688888876643

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.07  E-value=0.2  Score=50.38  Aligned_cols=39  Identities=18%  Similarity=0.323  Sum_probs=35.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+.||+++|.|. |.||+.+|+.|...|++|+++++++.+
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r  247 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC  247 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence            468999999998 689999999999999999999988764

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.04  E-value=1.3  Score=41.15  Aligned_cols=40  Identities=23%  Similarity=0.316  Sum_probs=34.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      .++++++++|.|+ ||+|..+++.|++.|. +++++|.+.-.
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve   60 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVS   60 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCccc
Confidence            4678889999988 7999999999999997 78898887644

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.02  E-value=0.21  Score=47.88  Aligned_cols=80  Identities=20%  Similarity=0.260  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+++++|.++++.+...|++|+++.++.++           .+.+.+.|....   .+..+.+ ..+.+.+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~-----------~~~~~~~g~~~~---~~~~~~~-~~~~i~~~  203 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAG-----------VAELRALGIGPV---VSTEQPG-WQDKVREA  203 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHH-----------HHHHHhcCCCEE---EcCCCch-HHHHHHHH
Confidence            57899999999999999999999999999988776653           233333343221   1222222 22222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .. ..++|+++.+.|.
T Consensus       204 ~~-~~~~d~v~d~~g~  218 (324)
T cd08292         204 AG-GAPISVALDSVGG  218 (324)
T ss_pred             hC-CCCCcEEEECCCC
Confidence            11 1269999999884

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.01  E-value=0.18  Score=48.52  Aligned_cols=78  Identities=17%  Similarity=0.230  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+++++|.|+++++|.++++.+...|++|+.++++.++           .+.+...|....   .|..+. . .+.+...
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~v---~~~~~~-~-~~~~~~~  209 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADA-----------ADYLKKLGAKEV---IPREEL-Q-EESIKPL  209 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHH-----------HHHHHHcCCCEE---EcchhH-H-HHHHHhh
Confidence            36799999999999999999999999999998887654           233344443221   222222 1 1222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       . .+.+|+++++.|.
T Consensus       210 -~-~~~~d~vld~~g~  223 (326)
T cd08289         210 -E-KQRWAGAVDPVGG  223 (326)
T ss_pred             -c-cCCcCEEEECCcH
Confidence             1 2469999998873

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=93.98  E-value=0.34  Score=43.81  Aligned_cols=39  Identities=23%  Similarity=0.352  Sum_probs=34.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .+++||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4689999999998 67899999999999999999976543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=93.94  E-value=0.19  Score=50.68  Aligned_cols=39  Identities=31%  Similarity=0.503  Sum_probs=35.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~   45 (406)
                      ++.+++++|.|+ |.+|+.+++.|...| .+|++.+|+.++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~r  216 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYER  216 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence            578999999997 999999999999999 689999998654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=93.94  E-value=0.24  Score=48.46  Aligned_cols=37  Identities=27%  Similarity=0.390  Sum_probs=33.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .|++++|.|+ +++|...++.+...|++|+++++++++
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~  202 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEK  202 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence            4889999999 999999999999999999998887654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=93.89  E-value=0.26  Score=48.65  Aligned_cols=79  Identities=22%  Similarity=0.323  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~   85 (406)
                      .|.+++|.|+ +++|...++.+...|+ +|+.++++.+++           +.+++.|....   .|..+. ++..+.+.
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~-----------~~~~~lGa~~~---i~~~~~~~~~~~~v~  250 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKF-----------ELAKKFGATDC---VNPKDHDKPIQQVLV  250 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH-----------HHHHHcCCCEE---EcccccchHHHHHHH
Confidence            4889999975 8999999999999999 688888877642           22334454322   233332 23444444


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +++|+++.+.|.
T Consensus       251 ~~~~--~g~d~vid~~g~  266 (368)
T cd08300         251 EMTD--GGVDYTFECIGN  266 (368)
T ss_pred             HHhC--CCCcEEEECCCC
Confidence            4432  479999999884

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=93.86  E-value=0.24  Score=46.97  Aligned_cols=38  Identities=34%  Similarity=0.497  Sum_probs=34.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .|++++|+|+++++|.+++..+...|++|+.++++.++
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~  176 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK  176 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH
Confidence            57899999999999999999999999999998887653

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=93.83  E-value=0.24  Score=47.14  Aligned_cols=77  Identities=26%  Similarity=0.390  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+++++|.++++.+...|++|+.+.++.++           .+.+...|....+.  +  .. +..+.+.+.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~~~~--~--~~-~~~~~i~~~  205 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPER-----------AALLKELGADEVVI--D--DG-AIAEQLRAA  205 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHhcCCcEEEe--c--Cc-cHHHHHHHh
Confidence            57899999999999999999999999999988777643           22233344322211  1  21 222222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                         .+++|+++++.|.
T Consensus       206 ---~~~~d~vl~~~~~  218 (320)
T cd08243         206 ---PGGFDKVLELVGT  218 (320)
T ss_pred             ---CCCceEEEECCCh
Confidence               2469999999883

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=93.80  E-value=0.82  Score=38.67  Aligned_cols=35  Identities=29%  Similarity=0.485  Sum_probs=30.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      .+.|+|++|.+|.++|..|...+.  ++++.++++++
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~   38 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDK   38 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCccc
Confidence            478999999999999999999984  79999998653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=93.80  E-value=0.22  Score=47.73  Aligned_cols=80  Identities=23%  Similarity=0.335  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.++           .+.+...+...   ..|..+.+..+.+.+ .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~---~~~~~~~~~~~~~~~-~  206 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAK-----------TALVRALGADV---AVDYTRPDWPDQVRE-A  206 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCCE---EEecCCccHHHHHHH-H
Confidence            47899999999999999999999999999998877653           22233344321   223334333333222 1


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      . ...++|+++++.|.
T Consensus       207 ~-~~~~~d~vl~~~g~  221 (324)
T cd08244         207 L-GGGGVTVVLDGVGG  221 (324)
T ss_pred             c-CCCCceEEEECCCh
Confidence            1 11359999999873

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.80  E-value=0.22  Score=51.09  Aligned_cols=132  Identities=15%  Similarity=0.105  Sum_probs=74.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++|.++|.|+ |++|.++|+.|+++|++|++.+++....      .....+.+++.|..+.. ..+..          
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~------~~~~~~~l~~~gv~~~~-~~~~~----------   74 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDER------HRALAAILEALGATVRL-GPGPT----------   74 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh------hHHHHHHHHHcCCEEEE-CCCcc----------
Confidence            577899999997 7799999999999999999998765321      11223445555544321 11111          


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCC------Chh-hhhhhhhhc----cccceEEeccchhhH-HHHHHHHHhhcCCc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANT------PLK-KYDLMNQIN----ARGTYLVKASQGLEI-QSAVNAAVDKFGGI  153 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~------~~~-~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~g~i  153 (406)
                          .....|.+|...|+....+....      +.. +.+...+..    -...+-++-+.+.+. ...+.++++..|+-
T Consensus        75 ----~~~~~D~Vv~s~Gi~~~~~~~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~~g~~  150 (480)
T PRK01438         75 ----LPEDTDLVVTSPGWRPDAPLLAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRAAGLR  150 (480)
T ss_pred             ----ccCCCCEEEECCCcCCCCHHHHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHHcCCC
Confidence                12357999999998654332100      000 000111110    001345566666664 77788888777654


Q ss_pred             ceEecc
Q psy6113         154 DILVNN  159 (406)
Q Consensus       154 d~li~~  159 (406)
                      -..+-|
T Consensus       151 ~~~~Gn  156 (480)
T PRK01438        151 AAAVGN  156 (480)
T ss_pred             eEEECC
Confidence            333333

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=93.79  E-value=0.3  Score=46.90  Aligned_cols=80  Identities=21%  Similarity=0.348  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|+|+++++|.++++.+...|++++++.++.++           .+.+...+....   .+..+.+...+.+.+.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~~---~~~~~~~~~~~~~~~~  205 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEK-----------VDFCKKLAAIIL---IRYPDEEGFAPKVKKL  205 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCcEE---EecCChhHHHHHHHHH
Confidence            57899999999999999999999999998887776543           223334444221   2222322122222222


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      .. ...+|+++++.|
T Consensus       206 ~~-~~~~d~~i~~~~  219 (334)
T PTZ00354        206 TG-EKGVNLVLDCVG  219 (334)
T ss_pred             hC-CCCceEEEECCc
Confidence            11 135999999887

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=93.79  E-value=0.18  Score=48.99  Aligned_cols=79  Identities=16%  Similarity=0.252  Sum_probs=51.1

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..|++++|+|+ +++|...++.+...|++ |++++++.++           .+.+.+.|...   ..|..+.+ .+++.+
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~-----------~~~~~~~ga~~---~i~~~~~~-~~~~~~  225 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPER-----------LELAKALGADF---VINSGQDD-VQEIRE  225 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHhCCCE---EEcCCcch-HHHHHH
Confidence            35889999986 89999999999899998 9988877654           22233445422   22444433 333222


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                       +. ...++|++|.+.|.
T Consensus       226 -~~-~~~~~d~vid~~g~  241 (339)
T cd08239         226 -LT-SGAGADVAIECSGN  241 (339)
T ss_pred             -Hh-CCCCCCEEEECCCC
Confidence             21 11369999999884

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=93.77  E-value=0.37  Score=43.81  Aligned_cols=38  Identities=32%  Similarity=0.473  Sum_probs=33.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|+.++++|.|+ ||+|..+++.|++.|. +++++|.+.
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   62 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDV   62 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4678899999997 8999999999999998 699998873

>KOG1205|consensus

Probab=93.70  E-value=0.24  Score=46.86  Aligned_cols=35  Identities=31%  Similarity=0.439  Sum_probs=30.4

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .+|+++..+..+.++.+...||++|+||||||+..
T Consensus        69 ~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~  103 (282)
T KOG1205|consen   69 QLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISL  103 (282)
T ss_pred             eCccCCHHHHHHHHHHHHHhcCCCCEEEecCcccc
Confidence            45677888888999999999999999999999764

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=93.69  E-value=0.28  Score=37.63  Aligned_cols=36  Identities=33%  Similarity=0.570  Sum_probs=30.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEec
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAK   41 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r   41 (406)
                      .++++|+++|.|. ++.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4588999999999 99999999999999 457777655

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=93.68  E-value=0.3  Score=48.18  Aligned_cols=79  Identities=24%  Similarity=0.326  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~   85 (406)
                      .|.+++|.|+ +++|...++.+...|+ +|++++++.++           .+.+++.|....   .|..+. ++..+.+.
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~-----------~~~~~~~Ga~~~---i~~~~~~~~~~~~v~  251 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSK-----------FEQAKKFGVTEF---VNPKDHDKPVQEVIA  251 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHcCCceE---EcccccchhHHHHHH
Confidence            5889999985 8999999998888998 79999887654           223344554221   233321 23444444


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +.+|+++.+.|.
T Consensus       252 ~~~~--~~~d~vid~~G~  267 (369)
T cd08301         252 EMTG--GGVDYSFECTGN  267 (369)
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            4332  369999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=93.65  E-value=0.11  Score=44.97  Aligned_cols=35  Identities=20%  Similarity=0.196  Sum_probs=32.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA   40 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~   40 (406)
                      .+++||.++|.|| |-+|...++.|.+.|++|++++
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            4789999999998 6799999999999999999885

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=93.65  E-value=1.7  Score=36.51  Aligned_cols=31  Identities=29%  Similarity=0.587  Sum_probs=27.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      ++|.|+ +|+|..+++.|++.|. ++.+++.+.
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~   33 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDT   33 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence            678887 8999999999999998 799988764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=93.62  E-value=0.069  Score=42.62  Aligned_cols=38  Identities=16%  Similarity=0.257  Sum_probs=32.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .+++||.++|.|| |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4689999999999 8899999999999999999998874

>PRK08328 hypothetical protein; Provisional

Probab=93.59  E-value=0.26  Score=45.43  Aligned_cols=40  Identities=23%  Similarity=0.414  Sum_probs=34.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      .++++++++|.|+ ||+|.++++.|++.|. +++++|.+.-.
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve   63 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPE   63 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence            4678889999988 7999999999999997 78888877543

>PRK05442 malate dehydrogenase; Provisional

Probab=93.54  E-value=0.3  Score=47.50  Aligned_cols=35  Identities=17%  Similarity=0.302  Sum_probs=29.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTAE   44 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~~   44 (406)
                      +.+.|+|++|.+|..+|..|+..|.       .+++++.++.
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            3678999999999999999998774       6999998653

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.53  E-value=0.22  Score=47.28  Aligned_cols=37  Identities=19%  Similarity=0.322  Sum_probs=34.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      +++||.++|.|.|.=+|+.++..|.++|++|+++.++
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            6899999999999999999999999999999988664

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.53  E-value=0.35  Score=45.70  Aligned_cols=37  Identities=24%  Similarity=0.383  Sum_probs=33.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      +|++++|.|+++++|.++++.+...|++|+.++++.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~  172 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEE  172 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHH
Confidence            5889999999999999999999999999998877654

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.42  E-value=0.62  Score=46.52  Aligned_cols=76  Identities=22%  Similarity=0.382  Sum_probs=53.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+|++|+++|.|+ |-+|.-+|++|+++|. +|+++.|+.++..          +.....++++       ...      
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~----------~La~~~~~~~-------~~l------  229 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAE----------ELAKKLGAEA-------VAL------  229 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHH----------HHHHHhCCee-------ecH------
Confidence            3589999999999 6799999999999995 7889999877532          2233334222       222      


Q ss_pred             HHHHHHhcCCccEEEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAIS  105 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~  105 (406)
                       +++.+.....|++|.+.|...
T Consensus       230 -~el~~~l~~~DvVissTsa~~  250 (414)
T COG0373         230 -EELLEALAEADVVISSTSAPH  250 (414)
T ss_pred             -HHHHHhhhhCCEEEEecCCCc
Confidence             233334456799999887543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.42  E-value=0.27  Score=48.19  Aligned_cols=77  Identities=21%  Similarity=0.328  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+ +++|...++.+...|++|++++|+....        +..+.+++.|...    .|..+. +..+    .
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~--------~~~~~~~~~Ga~~----v~~~~~-~~~~----~  233 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPD--------PKADIVEELGATY----VNSSKT-PVAE----V  233 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHcCCEE----ecCCcc-chhh----h
Confidence            6889999986 9999999988888999999998853211        1223344556542    233332 2222    1


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       ...+.+|++|.++|.
T Consensus       234 -~~~~~~d~vid~~g~  248 (355)
T cd08230         234 -KLVGEFDLIIEATGV  248 (355)
T ss_pred             -hhcCCCCEEEECcCC
Confidence             123579999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.33  E-value=0.9  Score=45.16  Aligned_cols=38  Identities=26%  Similarity=0.425  Sum_probs=33.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .++++++++|.|+ ||+|..+++.|+..|. ++++++++.
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~  169 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDV  169 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3578888999976 8999999999999998 799998874

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.30  E-value=3.3  Score=40.44  Aligned_cols=37  Identities=11%  Similarity=0.217  Sum_probs=29.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCe---EEEEecCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGAN---IVIAAKTAEPH   46 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~---Vvl~~r~~~~~   46 (406)
                      ..+.|.||+|..|+.+++.|.++|+.   +..+.+.....
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g   41 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG   41 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC
Confidence            46899999999999999999998874   46666654443

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.28  E-value=0.23  Score=40.87  Aligned_cols=66  Identities=20%  Similarity=0.417  Sum_probs=46.6

Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcC--CccEE
Q psy6113          20 GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFG--GIDIL   97 (406)
Q Consensus        20 GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g--~iD~l   97 (406)
                      |||...++.+...|++|+++++++++           .+.+++.|....   +|-++.+    +.+++.+..+  ++|++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k-----------~~~~~~~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~v   62 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEK-----------LELAKELGADHV---IDYSDDD----FVEQIRELTGGRGVDVV   62 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHH-----------HHHHHHTTESEE---EETTTSS----HHHHHHHHTTTSSEEEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHH-----------HHHHHhhccccc---ccccccc----cccccccccccccceEE
Confidence            68999999999999999999998754           344556663222   3444444    4555555544  69999


Q ss_pred             Eecccc
Q psy6113          98 VNNASA  103 (406)
Q Consensus        98 innAG~  103 (406)
                      |.++|.
T Consensus        63 id~~g~   68 (130)
T PF00107_consen   63 IDCVGS   68 (130)
T ss_dssp             EESSSS
T ss_pred             EEecCc
Confidence            999994

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=93.27  E-value=0.34  Score=43.15  Aligned_cols=38  Identities=32%  Similarity=0.401  Sum_probs=35.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      +++||.++|.|-|.=+|+-++..|.++|++|.+++.+.
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~   96 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDING   96 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCc
Confidence            79999999999999999999999999999999986544

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=93.26  E-value=0.53  Score=45.68  Aligned_cols=76  Identities=20%  Similarity=0.368  Sum_probs=50.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|+|+++++|.++++.....|++|+.+.++ ++           ...+...+...   ..|..+.+..+.    +
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-----------~~~~~~~g~~~---~~~~~~~~~~~~----l  222 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-----------IPLVKSLGADD---VIDYNNEDFEEE----L  222 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-----------HHHHHHhCCce---EEECCChhHHHH----H
Confidence            48999999999999999999999999998887654 21           12223334321   223333333222    2


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .. .+++|+++++.|.
T Consensus       223 ~~-~~~vd~vi~~~g~  237 (350)
T cd08248         223 TE-RGKFDVILDTVGG  237 (350)
T ss_pred             Hh-cCCCCEEEECCCh
Confidence            22 3579999999884

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK04148 hypothetical protein; Provisional

Probab=93.24  E-value=0.18  Score=42.15  Aligned_cols=57  Identities=12%  Similarity=0.160  Sum_probs=43.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      .+++.+++.|.+  .|.++|+.|++.|++|+.++.++..           .+..+..+  +.++..|+.+++
T Consensus        15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~a-----------V~~a~~~~--~~~v~dDlf~p~   71 (134)
T PRK04148         15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKA-----------VEKAKKLG--LNAFVDDLFNPN   71 (134)
T ss_pred             ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHH-----------HHHHHHhC--CeEEECcCCCCC
Confidence            356789999997  7888999999999999999998763           33333333  567788888765

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.15  E-value=0.35  Score=46.59  Aligned_cols=79  Identities=11%  Similarity=0.234  Sum_probs=48.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++++++||++++|.+.++.....|++|+.++++.++           .+.+++.|....+   |..+.+..++ +.+..
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~-----------~~~~~~~g~~~~i---~~~~~~~~~~-v~~~~  208 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQ-----------VDLLKKIGAEYVL---NSSDPDFLED-LKELI  208 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCcEEE---ECCCccHHHH-HHHHh
Confidence            3555556999999999988887889999988887653           2233344543222   2233222222 22221


Q ss_pred             HhcCCccEEEecccc
Q psy6113          89 DKFGGIDILVNNASA  103 (406)
Q Consensus        89 ~~~g~iD~linnAG~  103 (406)
                      . -.++|+++++.|.
T Consensus       209 ~-~~~~d~vid~~g~  222 (324)
T cd08291         209 A-KLNATIFFDAVGG  222 (324)
T ss_pred             C-CCCCcEEEECCCc
Confidence            1 1369999999883

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=93.13  E-value=0.34  Score=46.80  Aligned_cols=39  Identities=33%  Similarity=0.498  Sum_probs=33.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++.+++++|.|+ |.+|+.+++.|.+.|. +|++++|+.++
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~r  214 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYER  214 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            478999999988 9999999999999874 78899998764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=93.12  E-value=0.4  Score=47.89  Aligned_cols=37  Identities=30%  Similarity=0.418  Sum_probs=32.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .|.+++|+|+++++|.++++.+...|++++++.++.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~  225 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPE  225 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHH
Confidence            4789999999999999999988899999888876554

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PTZ00117 malate dehydrogenase; Provisional

Probab=93.02  E-value=0.89  Score=44.10  Aligned_cols=38  Identities=21%  Similarity=0.260  Sum_probs=32.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPH   46 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~   46 (406)
                      +.+.+.|+|| |.+|..++..++..| +.|++.+++++.+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~   42 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVP   42 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccc
Confidence            5667899997 889999999999999 6899999988764

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=92.96  E-value=0.43  Score=47.45  Aligned_cols=38  Identities=34%  Similarity=0.423  Sum_probs=33.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .|.+++|+|+++++|.+++..+...|+++++++++.++
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~  230 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEK  230 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence            47899999999999999999888999998888776553

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=92.92  E-value=1.6  Score=41.09  Aligned_cols=105  Identities=21%  Similarity=0.211  Sum_probs=70.4

Q ss_pred             cCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCC
Q psy6113          32 DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN  111 (406)
Q Consensus        32 ~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~  111 (406)
                      .+..+++++-+..=.       ++.++.+.+.|.++..+   -++.+-+.++.+++.+.++ +.+.|.            
T Consensus         5 ~~~~~lITGASsGIG-------~~~A~~lA~~g~~liLv---aR~~~kL~~la~~l~~~~~-v~v~vi------------   61 (265)
T COG0300           5 KGKTALITGASSGIG-------AELAKQLARRGYNLILV---ARREDKLEALAKELEDKTG-VEVEVI------------   61 (265)
T ss_pred             CCcEEEEECCCchHH-------HHHHHHHHHCCCEEEEE---eCcHHHHHHHHHHHHHhhC-ceEEEE------------
Confidence            345677776654422       24567777777776554   4678888888888887763 222222            


Q ss_pred             CChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHH
Q psy6113         112 TPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN  180 (406)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~  180 (406)
                                        .+|.++..+..++.+.+.+.++.||+||||||+....   .....+|+++.
T Consensus        62 ------------------~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g---~f~~~~~~~~~  109 (265)
T COG0300          62 ------------------PADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFG---PFLELSLDEEE  109 (265)
T ss_pred             ------------------ECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCcc---chhhCChHHHH
Confidence                              2344556677888888889999999999999976543   56666666653

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=92.90  E-value=0.25  Score=47.69  Aligned_cols=32  Identities=19%  Similarity=0.334  Sum_probs=28.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC--eEEEEecCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA--NIVIAAKTA   43 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~   43 (406)
                      +.|+|++|.+|.++|..|+..+.  .++++|+++
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~   35 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG   35 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence            67999999999999999999885  799999876

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=92.90  E-value=0.38  Score=47.53  Aligned_cols=78  Identities=24%  Similarity=0.383  Sum_probs=49.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+++++++++           .+..++.|....   .|..+.+..++ +.+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r-----------~~~a~~~Ga~~~---i~~~~~~~~~~-i~~  254 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDK-----------LALARELGATAT---VNAGDPNAVEQ-VRE  254 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHH-----------HHHHHHcCCceE---eCCCchhHHHH-HHH
Confidence            5789999985 8999999888888999 68888877654           222334454321   23333322222 222


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +.  .+++|++|.+.|.
T Consensus       255 ~~--~~g~d~vid~~G~  269 (371)
T cd08281         255 LT--GGGVDYAFEMAGS  269 (371)
T ss_pred             Hh--CCCCCEEEECCCC
Confidence            21  2369999999884

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=92.88  E-value=1.3  Score=36.89  Aligned_cols=33  Identities=27%  Similarity=0.548  Sum_probs=28.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKT   42 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~   42 (406)
                      .++++|.|+ +|+|..+++.|++.|. ++.++|.+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence            577888887 8999999999999998 78898765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=92.88  E-value=0.43  Score=45.10  Aligned_cols=78  Identities=22%  Similarity=0.293  Sum_probs=48.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..|++++|.|+ +++|...++.+...|++ |+++++++++           .+..++.|....+   |..+   ..+.+.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r-----------~~~a~~~Ga~~~i---~~~~---~~~~~~  180 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDR-----------RELALSFGATALA---EPEV---LAERQG  180 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHcCCcEec---Cchh---hHHHHH
Confidence            46889999987 79999999988889996 7777766543           2233444543221   2221   112222


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      +.. ....+|++|.+.|.
T Consensus       181 ~~~-~~~g~d~vid~~G~  197 (280)
T TIGR03366       181 GLQ-NGRGVDVALEFSGA  197 (280)
T ss_pred             HHh-CCCCCCEEEECCCC
Confidence            221 12369999999884

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=92.84  E-value=0.4  Score=46.97  Aligned_cols=37  Identities=22%  Similarity=0.370  Sum_probs=31.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      .|++++|+| ++++|.++++.+...|+ +|++++++.++
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~  214 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPER  214 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence            688999997 59999999998888999 89988776543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02827 Alcohol dehydrogenase-like

Probab=92.81  E-value=0.44  Score=47.32  Aligned_cols=79  Identities=22%  Similarity=0.314  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~   85 (406)
                      .|++++|.|+ +++|...++.+...|++ |++++++.++           .+..+..|....   .|..+. ++..+.+.
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~-----------~~~a~~lGa~~~---i~~~~~~~~~~~~v~  257 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEK-----------AEKAKTFGVTDF---INPNDLSEPIQQVIK  257 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH-----------HHHHHHcCCcEE---EcccccchHHHHHHH
Confidence            4899999986 89999999988889985 6677766543           222344454221   233332 23444444


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +++|++|.++|.
T Consensus       258 ~~~~--~g~d~vid~~G~  273 (378)
T PLN02827        258 RMTG--GGADYSFECVGD  273 (378)
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3322  379999999994

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=92.81  E-value=0.54  Score=44.92  Aligned_cols=80  Identities=18%  Similarity=0.250  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+++++|.++++.+...|++|+++.++.++.           +.+...+...   ..+..+....++ +.+.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~-----------~~~~~~g~~~---~~~~~~~~~~~~-~~~~  202 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV-----------EELKALGADE---VIDSSPEDLAQR-VKEA  202 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH-----------HHHHhcCCCE---EecccchhHHHH-HHHH
Confidence            578999999999999999999999999999888876541           2223334321   122223222222 2222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      . ...++|+++++.|.
T Consensus       203 ~-~~~~~d~vl~~~g~  217 (323)
T cd05282         203 T-GGAGARLALDAVGG  217 (323)
T ss_pred             h-cCCCceEEEECCCC
Confidence            1 12369999999883

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=92.80  E-value=1.7  Score=42.88  Aligned_cols=38  Identities=26%  Similarity=0.375  Sum_probs=33.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++++++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4678899999998 8999999999999997 799988765

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=92.79  E-value=0.43  Score=46.25  Aligned_cols=79  Identities=22%  Similarity=0.300  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+.+++|.|+++++|.++++.+.+.|++|+++.+++++           .+.+...+....   .+..+.+..+++. +.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~v---~~~~~~~~~~~~~-~~  229 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEK-----------LELAKELGADAF---VDFKKSDDVEAVK-EL  229 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHH-----------HHHHHHcCCcEE---EcCCCccHHHHHH-HH
Confidence            47899999999999999999999999999999887653           223333443221   2333333222222 11


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      . ..+++|+++++.+
T Consensus       230 ~-~~~~vd~vl~~~~  243 (341)
T cd08297         230 T-GGGGAHAVVVTAV  243 (341)
T ss_pred             h-cCCCCCEEEEcCC
Confidence            1 1246999998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>COG3165 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.79  E-value=0.19  Score=44.44  Aligned_cols=53  Identities=23%  Similarity=0.318  Sum_probs=46.4

Q ss_pred             CCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhh
Q psy6113         349 PSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL  402 (406)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~  402 (406)
                      .++.+|||++.....+.+|..+. ++..+.-+|+|.++||+.++++|..+++.+
T Consensus        63 ~eg~~Dc~v~~~~s~L~~L~~~~-~~~~~~~~g~l~veGD~q~~q~l~~Ll~~~  115 (204)
T COG3165          63 WEGEADCTVRARASVLPKLRDRQ-QLGQLARSGELEVEGDIQLAQNLVALLGSL  115 (204)
T ss_pred             ccCCCCeeeeechhhhHHHHhhc-cchhhccCCceeecchHHHHHHHHHHHHhc
Confidence            45688999999999999999864 566677899999999999999999999864

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=92.73  E-value=0.29  Score=49.69  Aligned_cols=64  Identities=22%  Similarity=0.251  Sum_probs=50.1

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +..+.++|.|+ +.+|+.+++.|.++|++|++++++++.           .+++...+..+..+..|.++++.+++
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~-----------~~~~~~~~~~~~~i~gd~~~~~~L~~  292 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER-----------AEELAEELPNTLVLHGDGTDQELLEE  292 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-----------HHHHHHHCCCCeEEECCCCCHHHHHh
Confidence            45688999999 899999999999999999999988753           33344434446678889998877644

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=92.72  E-value=0.028  Score=48.87  Aligned_cols=87  Identities=21%  Similarity=0.277  Sum_probs=50.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCccc----HHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGT----IYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~----i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ++-+.|- |-+|..+|++|+++|++|++.+|+.++.+++.+.    ..+..+..+    +...+..=+.+.+++++++..
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~----~~dvvi~~v~~~~~v~~v~~~   77 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAE----QADVVILCVPDDDAVEAVLFG   77 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHH----HBSEEEE-SSSHHHHHHHHHC
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhh----cccceEeecccchhhhhhhhh
Confidence            4666776 7899999999999999999999987543211000    000011111    234455567788888888777


Q ss_pred             --HHHhcCCccEEEeccc
Q psy6113          87 --AVDKFGGIDILVNNAS  102 (406)
Q Consensus        87 --i~~~~g~iD~linnAG  102 (406)
                        +.....+=.++|+..-
T Consensus        78 ~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   78 ENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             TTHGGGS-TTEEEEE-SS
T ss_pred             hHHhhccccceEEEecCC
Confidence              6555444445554443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=92.71  E-value=0.41  Score=46.23  Aligned_cols=32  Identities=19%  Similarity=0.359  Sum_probs=28.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEecC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAKT   42 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~   42 (406)
                      .+.|+|++|.+|.++|..|+.+|.  .+++++.+
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~   35 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV   35 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC
Confidence            478899999999999999999984  79999988

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.68  E-value=0.36  Score=45.78  Aligned_cols=39  Identities=33%  Similarity=0.493  Sum_probs=34.9

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +.|.+++|+|+++++|.+++..+...|++|+.++++.++
T Consensus       131 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~  169 (305)
T cd08270         131 LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPAR  169 (305)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            458999999999999999999999999999998887653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=92.67  E-value=0.72  Score=44.59  Aligned_cols=40  Identities=20%  Similarity=0.150  Sum_probs=35.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .++.||++.|.|- |.||+++|+.|...|++|+..+|+.+.
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~  171 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKS  171 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence            4688999999987 789999999999999999999887654

>PRK08223 hypothetical protein; Validated

Probab=92.62  E-value=1.3  Score=42.16  Aligned_cols=39  Identities=26%  Similarity=0.301  Sum_probs=34.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~   44 (406)
                      .+|++..++|.|+ ||+|..+++.|+..|. ++.++|.+.-
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~V   62 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVF   62 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence            4678899999998 7999999999999997 7889887653

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=92.61  E-value=0.51  Score=46.81  Aligned_cols=75  Identities=17%  Similarity=0.395  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|.|+ +++|...++.....|++|++++++.++.          .+..++.|....   .|..+.+.+       
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~----------~~~a~~lGa~~~---i~~~~~~~v-------  236 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKE----------REAIDRLGADSF---LVTTDSQKM-------  236 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHh----------HHHHHhCCCcEE---EcCcCHHHH-------
Confidence            5889999986 8999999998889999999887765431          122233454322   233332222       


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .+..+++|+++.++|.
T Consensus       237 ~~~~~~~D~vid~~G~  252 (375)
T PLN02178        237 KEAVGTMDFIIDTVSA  252 (375)
T ss_pred             HHhhCCCcEEEECCCc
Confidence            2222469999999884

>PLN00203 glutamyl-tRNA reductase

Probab=92.61  E-value=0.35  Score=50.06  Aligned_cols=39  Identities=18%  Similarity=0.415  Sum_probs=35.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++.++.++|.|+ |++|+.+++.|..+|+ +|+++.|+.++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~er  302 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEER  302 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHH
Confidence            488999999999 9999999999999997 79999998765

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=92.60  E-value=0.19  Score=42.52  Aligned_cols=39  Identities=21%  Similarity=0.353  Sum_probs=35.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .+++||.++|.|.+.-.|+.++..|.++|++|.+++++.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            378999999999999999999999999999999987654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.54  E-value=1.6  Score=40.80  Aligned_cols=35  Identities=17%  Similarity=0.194  Sum_probs=29.9

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .++.++..+++..++.+.+.||++|++|||||...
T Consensus        62 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~   96 (261)
T PRK08690         62 RCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAP   96 (261)
T ss_pred             ECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence            34566778889999999999999999999999764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=92.52  E-value=0.32  Score=42.91  Aligned_cols=40  Identities=25%  Similarity=0.334  Sum_probs=34.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ..++.||++.|.|. |.||+++|+.|..-|++|+..+|...
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~   70 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPK   70 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCC
Confidence            45789999999987 88999999999999999999999875

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=92.51  E-value=0.55  Score=45.79  Aligned_cols=77  Identities=23%  Similarity=0.358  Sum_probs=49.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|.+.++.+...|+ +|++++++.++           .+.+.+.|....   .|..+.+..    ++
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~-----------~~~~~~~ga~~~---i~~~~~~~~----~~  232 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEAR-----------RELAEELGATIV---LDPTEVDVV----AE  232 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHhCCCEE---ECCCccCHH----HH
Confidence            5789999985 7999999999999999 78888776553           222233444322   243333322    22


Q ss_pred             HHHhc--CCccEEEecccc
Q psy6113          87 AVDKF--GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~  103 (406)
                      +.+..  +++|+++.+.|.
T Consensus       233 l~~~~~~~~~d~vid~~g~  251 (351)
T cd08233         233 VRKLTGGGGVDVSFDCAGV  251 (351)
T ss_pred             HHHHhCCCCCCEEEECCCC
Confidence            32222  249999999984

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=92.46  E-value=0.7  Score=45.49  Aligned_cols=75  Identities=15%  Similarity=0.328  Sum_probs=48.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|.|+ +++|...++.+...|++|++++.+.++..          ...++.|....+   |..+.+.+.      
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~----------~~~~~~Ga~~vi---~~~~~~~~~------  242 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKED----------EAINRLGADSFL---VSTDPEKMK------  242 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhh----------hHHHhCCCcEEE---cCCCHHHHH------
Confidence            5889999775 89999999988889999988877665421          112334442221   223322222      


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       +..+.+|++|.+.|.
T Consensus       243 -~~~~~~D~vid~~g~  257 (360)
T PLN02586        243 -AAIGTMDYIIDTVSA  257 (360)
T ss_pred             -hhcCCCCEEEECCCC
Confidence             222468999999883

>KOG1201|consensus

Probab=92.40  E-value=0.94  Score=42.94  Aligned_cols=73  Identities=26%  Similarity=0.354  Sum_probs=51.5

Q ss_pred             HHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccc
Q psy6113          56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQ  135 (406)
Q Consensus        56 ~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (406)
                      .+.++.+.|..+..  .|+ +.+...+.++++.+. |...                                +|.++.++
T Consensus        54 ialefa~rg~~~vl--~Di-n~~~~~etv~~~~~~-g~~~--------------------------------~y~cdis~   97 (300)
T KOG1201|consen   54 IALEFAKRGAKLVL--WDI-NKQGNEETVKEIRKI-GEAK--------------------------------AYTCDISD   97 (300)
T ss_pred             HHHHHHHhCCeEEE--Eec-cccchHHHHHHHHhc-Ccee--------------------------------EEEecCCC
Confidence            56666666764433  344 455666666666543 2222                                35566777


Q ss_pred             hhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         136 GLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       136 ~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ..++.+..+.+.+.+|.||++|||||+.+
T Consensus        98 ~eei~~~a~~Vk~e~G~V~ILVNNAGI~~  126 (300)
T KOG1201|consen   98 REEIYRLAKKVKKEVGDVDILVNNAGIVT  126 (300)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEecccccc
Confidence            88899999999999999999999999775

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=92.38  E-value=0.53  Score=46.38  Aligned_cols=79  Identities=18%  Similarity=0.334  Sum_probs=49.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~   85 (406)
                      .|.+++|.|+ +++|...++.+...|+ +|+.++++.++           .+.+++.|....   .|..+. ..+.+.+.
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~-----------~~~~~~~ga~~~---i~~~~~~~~~~~~~~  248 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDK-----------FEKAKEFGATDF---INPKDSDKPVSEVIR  248 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHH-----------HHHHHHcCCCcE---eccccccchHHHHHH
Confidence            5889999975 8999999998888898 68888887654           222233443211   222221 12223333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      +...  +++|++|.+.|.
T Consensus       249 ~~~~--~g~d~vid~~g~  264 (365)
T cd08277         249 EMTG--GGVDYSFECTGN  264 (365)
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3322  479999999884

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=92.29  E-value=0.51  Score=46.02  Aligned_cols=40  Identities=28%  Similarity=0.240  Sum_probs=35.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ..+.|+++.|.|. |.||+++|+.|...|++|++.+|+.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            3689999999987 679999999999999999999988653

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.21  E-value=0.45  Score=45.13  Aligned_cols=39  Identities=21%  Similarity=0.382  Sum_probs=35.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .++.||.++|.|-|.=+|+.++..|.++|++|.++.+..
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T  193 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT  193 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC
Confidence            368999999999999999999999999999999886543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=92.19  E-value=2.2  Score=39.15  Aligned_cols=38  Identities=24%  Similarity=0.400  Sum_probs=32.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++++++|.|+ +|+|..+|+.|++.|. +++++|.+.
T Consensus        17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~   55 (228)
T cd00757          17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDV   55 (228)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            3678899999996 8999999999999998 788887653

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=92.18  E-value=0.35  Score=44.47  Aligned_cols=37  Identities=38%  Similarity=0.481  Sum_probs=33.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC---eEEEEecCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA---NIVIAAKTA   43 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~   43 (406)
                      ++++++++|.|+ ||.|++++..|++.|.   +|++++|+.
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~g   61 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKG   61 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCC
Confidence            688999999999 8999999999999997   499999983

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=92.17  E-value=0.56  Score=46.00  Aligned_cols=79  Identities=20%  Similarity=0.288  Sum_probs=49.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|.|+ +++|...++.+...|++ |+.++++.++           .+.+++.|...   ..|..+.+..+.+ .+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~-----------~~~~~~~Ga~~---~i~~~~~~~~~~i-~~  239 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRK-----------LEWAREFGATH---TVNSSGTDPVEAI-RA  239 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHcCCce---EEcCCCcCHHHHH-HH
Confidence            4889999985 89999999888888985 8888887654           22334445422   1233333222222 22


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      ... ..++|++|.+.|.
T Consensus       240 ~~~-~~g~d~vid~~g~  255 (358)
T TIGR03451       240 LTG-GFGADVVIDAVGR  255 (358)
T ss_pred             HhC-CCCCCEEEECCCC
Confidence            211 1259999999884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.15  E-value=0.67  Score=44.99  Aligned_cols=35  Identities=37%  Similarity=0.613  Sum_probs=31.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      .|.+++|.|+++++|.++++.+...|++|+.++++
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~  211 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGA  211 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCc
Confidence            48899999999999999999999999998887754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=92.14  E-value=0.61  Score=40.39  Aligned_cols=39  Identities=26%  Similarity=0.430  Sum_probs=31.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .++.||.++|.|.|.-+|+.++..|.++|+.|.++....
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T   70 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT   70 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence            368999999999999999999999999999999876654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=92.11  E-value=0.6  Score=45.20  Aligned_cols=37  Identities=24%  Similarity=0.336  Sum_probs=32.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .|++++|.| ++++|.++++.+...|++|++++++.++
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~  199 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDK  199 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHH
Confidence            578999999 7999999999999999999999887653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=92.10  E-value=0.54  Score=47.21  Aligned_cols=38  Identities=18%  Similarity=0.132  Sum_probs=31.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC---eEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA---NIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~   45 (406)
                      .|.+++|.|+++++|...++.+...|+   +|++++++.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r  215 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDER  215 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHH
Confidence            468999999999999998876666554   79988887765

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=92.05  E-value=1.2  Score=40.13  Aligned_cols=38  Identities=29%  Similarity=0.434  Sum_probs=31.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++.+++|.|++ |+|..+++.|+..|. ++.++|.+.
T Consensus        15 ~~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          15 NKLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HHHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCc
Confidence            35778889999874 699999999999998 688887653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=92.04  E-value=0.72  Score=44.48  Aligned_cols=37  Identities=22%  Similarity=0.401  Sum_probs=31.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~   45 (406)
                      |.+++|+|+++++|.++++.+... |++|+.+.++.++
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~  186 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPES  186 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHH
Confidence            889999999999999988766666 9999998777653

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=91.96  E-value=0.79  Score=44.32  Aligned_cols=86  Identities=14%  Similarity=0.197  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|.|+++++|.++++.+...|++|+++.++.+..+       +..+.+...|....+...+.+ ..+..+.+...
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~  217 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLE-------ELKERLKALGADHVLTEEELR-SLLATELLKSA  217 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcch-------hHHHHHHhcCCCEEEeCcccc-cccHHHHHHHH
Confidence            5899999999999999999999999999988877654211       122333344443222211110 00222222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      ..  +.+|+++++.|.
T Consensus       218 ~~--~~~d~vld~~g~  231 (341)
T cd08290         218 PG--GRPKLALNCVGG  231 (341)
T ss_pred             cC--CCceEEEECcCc
Confidence            21  269999999884

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=91.95  E-value=0.7  Score=45.70  Aligned_cols=79  Identities=19%  Similarity=0.342  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~   85 (406)
                      .|.+++|.| .+++|.+++..+...|+ +|++++++.++           .+.+...|..-   ..+..+. +...+.+.
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~-----------~~~a~~lGa~~---~i~~~~~~~~~~~~v~  254 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDK-----------FAKAKELGATE---CINPQDYKKPIQEVLT  254 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHcCCce---EecccccchhHHHHHH
Confidence            478899996 58999999999999999 79998887653           22233344321   1222221 12333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      +...  +++|+++++.|.
T Consensus       255 ~~~~--~~~d~vld~~g~  270 (373)
T cd08299         255 EMTD--GGVDFSFEVIGR  270 (373)
T ss_pred             HHhC--CCCeEEEECCCC
Confidence            3322  479999999884

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=91.86  E-value=0.47  Score=52.86  Aligned_cols=77  Identities=18%  Similarity=0.239  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-Ce-------------EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeec
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG-AN-------------IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD   73 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G-a~-------------Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~D   73 (406)
                      +.|.++|.|+ |.+|+..++.|++.. +.             |++++++.+.+           +++.+.-.++..+.+|
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a-----------~~la~~~~~~~~v~lD  635 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDA-----------KETVEGIENAEAVQLD  635 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHH-----------HHHHHhcCCCceEEee
Confidence            4678999997 899999999999864 33             77788876532           2222211246678999


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEecccc
Q psy6113          74 IRDEHAVQSAVNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        74 l~~~~~v~~~~~~i~~~~g~iD~linnAG~  103 (406)
                      ++|.+++.++++       .+|++|++...
T Consensus       636 v~D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        636 VSDSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             cCCHHHHHHhhc-------CCCEEEECCCc
Confidence            999988777655       48999988764

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=91.85  E-value=0.11  Score=46.01  Aligned_cols=37  Identities=22%  Similarity=0.412  Sum_probs=30.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK   48 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~   48 (406)
                      ++.|.|+ |-+|+.+|..++..|++|++.+++++.+++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~   37 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALER   37 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHh
Confidence            3667888 889999999999999999999998876443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=91.82  E-value=0.49  Score=45.50  Aligned_cols=80  Identities=16%  Similarity=0.241  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+++.+|.++++.+...|++|+.+.++.++           .+.+...|... +  ++..+.+ ..+.+.+.
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~-----------~~~~~~~g~~~-~--~~~~~~~-~~~~~~~~  204 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQK-----------AQRAKKAGAWQ-V--INYREEN-IVERVKEI  204 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHCCCCE-E--EcCCCCc-HHHHHHHH
Confidence            57899999999999999998888999999988776543           22233444322 1  2222222 22222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .. ..++|+++++.|.
T Consensus       205 ~~-~~~~d~vl~~~~~  219 (327)
T PRK10754        205 TG-GKKVRVVYDSVGK  219 (327)
T ss_pred             cC-CCCeEEEEECCcH
Confidence            11 2369999998873

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=91.79  E-value=0.97  Score=42.46  Aligned_cols=37  Identities=24%  Similarity=0.332  Sum_probs=31.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcC----CeEEEEecCCCCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDG----ANIVIAAKTAEPHPK   48 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~G----a~Vvl~~r~~~~~~~   48 (406)
                      +.|.|++|.+|..++..|+..|    .+|++.|+++++++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~   41 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKG   41 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchH
Confidence            4689998899999999999999    689999998876543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=91.66  E-value=1  Score=40.49  Aligned_cols=38  Identities=24%  Similarity=0.454  Sum_probs=31.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++++++|.|+ +|+|..+++.|+..|. ++.++|.+.
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~   55 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRT   55 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence            3577888999986 6699999999999998 688887653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06153 hypothetical protein; Provisional

Probab=91.66  E-value=0.98  Score=44.65  Aligned_cols=88  Identities=22%  Similarity=0.222  Sum_probs=55.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCC---------------CCCcccHHHHHHHHHHcCCeee
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH---------------PKLPGTIYSAAKEVEDAGGNCL   68 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~---------------~~~~~~i~~~~~~~~~~g~~~~   68 (406)
                      .+|++++++|.|+ ||+|..++..|++.|. ++++++.+.=..               .+...+.+.+.+.+...+..+.
T Consensus       172 ~kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~  250 (393)
T PRK06153        172 AKLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIV  250 (393)
T ss_pred             HHHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEE
Confidence            3688999999998 8999999999999997 788887552111               1111233334444555555565


Q ss_pred             eeeecCCChHHHHHHHHHHHHhcCCccEEEeccc
Q psy6113          69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        69 ~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG  102 (406)
                      .+...+ +++.+.        .+...|++|-|..
T Consensus       251 ~~~~~I-~~~n~~--------~L~~~DiV~dcvD  275 (393)
T PRK06153        251 PHPEYI-DEDNVD--------ELDGFTFVFVCVD  275 (393)
T ss_pred             EEeecC-CHHHHH--------HhcCCCEEEEcCC
Confidence            555555 333222        2246788887766

>KOG0024|consensus

Probab=91.58  E-value=1.1  Score=42.88  Aligned_cols=84  Identities=21%  Similarity=0.227  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.++||.|| +-||+..-+.+-.-|+ +|++++-.++++           +..++.|.++....-.-.+.+.+.+.+++
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rl-----------e~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~  236 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRL-----------ELAKKFGATVTDPSSHKSSPQELAELVEK  236 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHH-----------HHHHHhCCeEEeeccccccHHHHHHHHHh
Confidence            4788999998 7899998888888898 799988877653           23344566654433333344555555555


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                      ..... .+|+.|.|.|..
T Consensus       237 ~~g~~-~~d~~~dCsG~~  253 (354)
T KOG0024|consen  237 ALGKK-QPDVTFDCSGAE  253 (354)
T ss_pred             hcccc-CCCeEEEccCch
Confidence            44322 499999999964

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=91.48  E-value=5.3  Score=38.77  Aligned_cols=38  Identities=16%  Similarity=0.181  Sum_probs=32.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH   46 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~   46 (406)
                      +.+.+.|.|+ |.+|..+|..++..|. .|++++++++..
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~   43 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIP   43 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence            3467889995 7799999999999994 899999988763

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=91.44  E-value=0.83  Score=43.68  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=32.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +.+++|.|+++++|.++++.....|++|++++++.++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~  183 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQ  183 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            4689999999999999999888899999998887654

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>KOG1196|consensus

Probab=91.44  E-value=1.8  Score=41.08  Aligned_cols=79  Identities=25%  Similarity=0.377  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +|++++|.||++-.|.-.-+--.-.|+.||..+-+.++.           ..+... |-...   .|--++..+.+++.+
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv-----------~ll~~~~G~d~a---fNYK~e~~~~~aL~r  218 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKV-----------DLLKTKFGFDDA---FNYKEESDLSAALKR  218 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhh-----------hhhHhccCCccc---eeccCccCHHHHHHH
Confidence            689999999999999765554445699999888777752           223333 32211   133344445444444


Q ss_pred             HHHhc-CCccEEEecccc
Q psy6113          87 AVDKF-GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~-g~iD~linnAG~  103 (406)
                         .+ .+||+.+-|.|.
T Consensus       219 ---~~P~GIDiYfeNVGG  233 (343)
T KOG1196|consen  219 ---CFPEGIDIYFENVGG  233 (343)
T ss_pred             ---hCCCcceEEEeccCc
Confidence               23 379999999983

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=91.44  E-value=2.4  Score=42.02  Aligned_cols=38  Identities=21%  Similarity=0.403  Sum_probs=33.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++.+++|.|+ ||+|..+++.|+..|. ++++++.+.
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~   75 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDT   75 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            4678899999988 7999999999999997 899998774

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=91.41  E-value=0.62  Score=45.24  Aligned_cols=33  Identities=18%  Similarity=0.286  Sum_probs=29.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTA   43 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~   43 (406)
                      .+.|+|++|.+|.++|..|+..|.       .+++.+.+.
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            478999999999999999999884       699999865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=91.35  E-value=1.2  Score=36.66  Aligned_cols=90  Identities=20%  Similarity=0.310  Sum_probs=54.8

Q ss_pred             EEEEecCCchHHHHHHHHHHH-cCCeEEE-EecCCCC-CCCCcccHHH-------HHHHHHHcCCeeeeeeecCCChHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAK-DGANIVI-AAKTAEP-HPKLPGTIYS-------AAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~-~Ga~Vvl-~~r~~~~-~~~~~~~i~~-------~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      .++|.|++|-+|+.+++.+.+ .+.+++. ++|+.+. ..+-.+.+..       ....+++.-.+ .=+..|.|.++.+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-~DVvIDfT~p~~~   80 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-ADVVIDFTNPDAV   80 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--SEEEEES-HHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-CCEEEEcCChHHh
Confidence            478999999999999999999 6777664 4666521 1110000000       00111111111 1255799999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~  103 (406)
                      ...++.+.++  ++.+++-..|.
T Consensus        81 ~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   81 YDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHH--T-EEEEE-SSS
T ss_pred             HHHHHHHHhC--CCCEEEECCCC
Confidence            9999999887  78888888885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG1208|consensus

Probab=91.33  E-value=1.3  Score=42.73  Aligned_cols=92  Identities=20%  Similarity=0.229  Sum_probs=64.0

Q ss_pred             cCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCC
Q psy6113          32 DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN  111 (406)
Q Consensus        32 ~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~  111 (406)
                      .|-.+++++.+..-.       .+++.++...|.++..   -.+|.+..+++++++.+....-++.+.            
T Consensus        34 ~~~~~vVTGansGIG-------~eta~~La~~Ga~Vv~---~~R~~~~~~~~~~~i~~~~~~~~i~~~------------   91 (314)
T KOG1208|consen   34 SGKVALVTGATSGIG-------FETARELALRGAHVVL---ACRNEERGEEAKEQIQKGKANQKIRVI------------   91 (314)
T ss_pred             CCcEEEEECCCCchH-------HHHHHHHHhCCCEEEE---EeCCHHHHHHHHHHHHhcCCCCceEEE------------
Confidence            455677777766322       2567777777865544   456667888888888764444333332            


Q ss_pred             CChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         112 TPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                                        ..+.++...+++.++.....++++|++|||||+.
T Consensus        92 ------------------~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~  125 (314)
T KOG1208|consen   92 ------------------QLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVM  125 (314)
T ss_pred             ------------------ECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccc
Confidence                              2345677888899999999999999999999965

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=91.33  E-value=0.7  Score=45.01  Aligned_cols=37  Identities=27%  Similarity=0.294  Sum_probs=30.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~   45 (406)
                      .|++++|+|+ +++|.+.++.+...|++ |+.++++.++
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~  197 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEK  197 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence            5889999975 99999999999899997 6777776653

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=91.20  E-value=1  Score=43.63  Aligned_cols=78  Identities=19%  Similarity=0.324  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++++|+| .+++|.++++.+...|.+|+.+.++.++           .+.+...|..   ...+..++.+..+.+...
T Consensus       165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~-----------~~~~~~~g~~---~~i~~~~~~~~~~~~~~~  229 (345)
T cd08260         165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDK-----------LELARELGAV---ATVNASEVEDVAAAVRDL  229 (345)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHH-----------HHHHHHhCCC---EEEccccchhHHHHHHHH
Confidence            578999999 6899999999999999999988777653           2233334431   112333322333333333


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      ..  +++|+++.+.|
T Consensus       230 ~~--~~~d~vi~~~g  242 (345)
T cd08260         230 TG--GGAHVSVDALG  242 (345)
T ss_pred             hC--CCCCEEEEcCC
Confidence            22  27999999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=91.14  E-value=0.42  Score=46.41  Aligned_cols=41  Identities=22%  Similarity=0.378  Sum_probs=34.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ...+++|++.|.|.+ -+|.++|+.|.+.|.+|++..|+..+
T Consensus        12 ~~~L~gktIgIIG~G-smG~AlA~~L~~sG~~Vvv~~r~~~~   52 (330)
T PRK05479         12 LSLIKGKKVAIIGYG-SQGHAHALNLRDSGVDVVVGLREGSK   52 (330)
T ss_pred             hhhhCCCEEEEEeeH-HHHHHHHHHHHHCCCEEEEEECCchh
Confidence            456889999999874 69999999999999999987776543

>PLN03139 formate dehydrogenase; Provisional

Probab=91.10  E-value=0.48  Score=47.14  Aligned_cols=38  Identities=21%  Similarity=0.253  Sum_probs=34.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .++.||++.|.|. |.||+.+|+.|...|++|+..+|+.
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4689999999996 7799999999999999999988874

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=91.01  E-value=0.33  Score=49.33  Aligned_cols=40  Identities=23%  Similarity=0.286  Sum_probs=35.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ..+.||+++|.|.+ .||+.+|++|...|++|+++++++.+
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~  289 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC  289 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            36899999999986 59999999999999999999887654

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.89  E-value=0.43  Score=45.67  Aligned_cols=39  Identities=18%  Similarity=0.309  Sum_probs=35.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ++.||.+.|.|.|+=+|+.+|..|.++|++|.+..|+..
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            789999999999999999999999999999999876543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=90.83  E-value=0.23  Score=45.70  Aligned_cols=74  Identities=24%  Similarity=0.381  Sum_probs=51.3

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      ++++.+.+.|.++...   -+..+-++++.+++.+  +...                                ....+++
T Consensus        21 A~A~~l~~~G~~vvl~---aRR~drL~~la~~~~~--~~~~--------------------------------~~~~DVt   63 (246)
T COG4221          21 ATARALAEAGAKVVLA---ARREERLEALADEIGA--GAAL--------------------------------ALALDVT   63 (246)
T ss_pred             HHHHHHHHCCCeEEEE---eccHHHHHHHHHhhcc--CceE--------------------------------EEeeccC
Confidence            4667777777765443   3556667777666532  1111                                1234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      +...+...+..+.+.||+||+||||||+...
T Consensus        64 D~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g   94 (246)
T COG4221          64 DRAAVEAAIEALPEEFGRIDILVNNAGLALG   94 (246)
T ss_pred             CHHHHHHHHHHHHHhhCcccEEEecCCCCcC
Confidence            7778889999999999999999999997753

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=90.82  E-value=0.7  Score=47.74  Aligned_cols=39  Identities=28%  Similarity=0.417  Sum_probs=33.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKL   49 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~   49 (406)
                      +.+.|.|+ |-+|..+|..|++.|+.|++.+|+.+.+++.
T Consensus         6 ~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~~   44 (503)
T TIGR02279         6 VTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALARA   44 (503)
T ss_pred             cEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            44677787 7899999999999999999999998876543

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=90.82  E-value=0.78  Score=43.74  Aligned_cols=47  Identities=21%  Similarity=0.278  Sum_probs=36.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAK   58 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~   58 (406)
                      ++.|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+....+
T Consensus         7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~   53 (286)
T PRK07819          7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLE   53 (286)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHH
Confidence            4666677 7899999999999999999999998876554444443333

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=90.82  E-value=1.5  Score=42.46  Aligned_cols=79  Identities=22%  Similarity=0.343  Sum_probs=50.8

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ..+++++|.|+++++|.++++.+...|++|+.+. +.++           .+.++..|....   .+..+.+..+. +.+
T Consensus       153 ~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~-----------~~~~~~~g~~~v---~~~~~~~~~~~-l~~  216 (339)
T cd08249         153 SKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKN-----------FDLVKSLGADAV---FDYHDPDVVED-IRA  216 (339)
T ss_pred             CCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-Cccc-----------HHHHHhcCCCEE---EECCCchHHHH-HHH
Confidence            4689999999999999999999999999988776 3332           122333443221   23333322222 233


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      ...  +++|+++++.|.
T Consensus       217 ~~~--~~~d~vl~~~g~  231 (339)
T cd08249         217 ATG--GKLRYALDCIST  231 (339)
T ss_pred             hcC--CCeeEEEEeecc
Confidence            222  569999998873

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=90.71  E-value=1.6  Score=38.40  Aligned_cols=31  Identities=32%  Similarity=0.515  Sum_probs=27.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      ++|.|+ +|+|..+++.|++.|. +++++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            677786 8999999999999998 699998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.68  E-value=0.46  Score=45.43  Aligned_cols=38  Identities=34%  Similarity=0.454  Sum_probs=34.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA-KTA   43 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~-r~~   43 (406)
                      +++||+++|.|-++-+|+.+|..|.++|+.|.+.. |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            68999999999999999999999999999999884 553

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=90.65  E-value=1.1  Score=43.04  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=33.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~   45 (406)
                      |.+++|.|+++++|.++++.+...| ++|++++++.++
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~  187 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPES  187 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhh
Confidence            8899999999999999999999999 999998887654

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	406
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		2e-62
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		1e-50
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		8e-48
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		5e-11
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		6e-11
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-10
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		8e-10
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-09
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		4e-09
1qnd_A	123	Sterol Carrier Protein-2, Nmr, 20 Structures Length		6e-09
2c0l_B	122	Tpr Domain Of Human Pex5p In Complex With Human Msc		6e-09
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		6e-09
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		2e-08
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-08
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-08
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-08
1c44_A	123	Sterol Carrier Protein 2 (Scp2) From Rabbit Length		4e-08
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-08
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-06
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-08
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		8e-08
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-07
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		2e-07
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-07
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		1e-06
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		1e-06
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-06
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		2e-06
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		7e-04
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-06
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-06
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-06
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		3e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-06
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		4e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-06
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		5e-06
1ikt_A	120	Liganded Sterol Carrier Protein Type 2 (Scp-2) Like		5e-06
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		6e-06
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		6e-06
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		2e-04
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		6e-06
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		8e-06
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		9e-06
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		9e-06
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-05
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-05
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-05
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-05
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-05
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-05
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		2e-05
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-05
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-05
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-05
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-05
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-05
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-05
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		3e-05
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		4e-05
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-05
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		4e-05
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-05
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		6e-05
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-05
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		6e-05
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		7e-05
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		7e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		7e-05
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		7e-05
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		8e-05
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		8e-05
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-04
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-04
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		1e-04
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-04
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-04
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-04
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-04
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-04
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-04
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		2e-04
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-04
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		3e-04
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-04
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		4e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-04
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-04
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		4e-04
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		4e-04
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-04
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		5e-04
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-04
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-04
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-04
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-04
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		7e-04
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		7e-04
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		9e-04

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 119/200 (59%), Positives = 149/200 (74%), Gaps = 5/200 (2%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I +AV  A+ KFGGIDILVNNASAISLT+T +TP K+ DLM  +N RGTYL S+ C+PY
Sbjct: 115 QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPY 174
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           LKKS  AHILNISPPLNLNP WFK H AYTI+KYGMSM  LGMAEEFKG+ IAVNALWP+
Sbjct: 175 LKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGE-IAVNALWPK 233
Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHID 317
           TAI+TAA++ML G   +++   RK +I+ADAAY I    P S TG F+ID+ +LK + I+
Sbjct: 234 TAIHTAAMDMLGGPGIESQC--RKVDIIADAAYSIF-QKPKSFTGNFVIDENILKEEGIE 290
Query: 318 -LEQYSYVPNGAAEGSWHID 336
             + Y+  P    +  + +D
Sbjct: 291 NFDVYAIKPGHPLQPDFFLD 310

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score =  197 bits (501), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/192 (50%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++++AV A VD FGGIDILVNNASAI L  T +TP K++DL  Q+NARG+++ +Q CLP+
Sbjct: 76  QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNARGSFVCAQACLPH 135
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           L ++ + HIL ++PP +LNP W+  H  YT++K G S+  LG+A EF    +A+NALWPR
Sbjct: 136 LLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAEFGPQGVAINALWPR 195
Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
           T I T AI  L G  A   A  R+PEI ADAA+ +L+       GQFLIDDEVL    I 
Sbjct: 196 TVIATDAINXLPGVDA---AACRRPEIXADAAHAVLTREAAGFHGQFLIDDEVLAQAGIT 252
Query: 317 DLEQYSYVPNGA 328
           DL  Y+  P  A
Sbjct: 253 DLSGYAVDPQRA 264

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score =  187 bits (476), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 123/181 (67%), Gaps = 4/181 (2%)
Query: 147 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHI 206
           V++FGGIDI VNNASAI+L      PLK++DLMN I  RGTY VSQ C+P++K  ++ HI
Sbjct: 88  VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHI 147
Query: 207 LNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIE 266
           L +SPP+ L P W +    Y ++KYGM++CALG+AEE +   IA N LWPRT + TAA++
Sbjct: 148 LTLSPPIRLEPKWLR-PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ 206
Query: 267 MLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQ-FLIDDEVLKAQHIDLEQYSYVP 325
            L GG  +A A SRKPE+ ADAAY +L + P S TG   L +D +L++   DL  Y  VP
Sbjct: 207 NLLGGD-EAMARSRKPEVYADAAYVVL-NKPSSYTGNTLLCEDVLLESGVTDLSVYDCVP 264
Query: 326 N 326
Sbjct: 265 G 265

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
           +  A+  FG +DILVNNA  +       T  + ++L+N ++ +G++  +Q   PY+KK N
Sbjct: 93  IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN 152
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT 262
           +  I+  S   N   +     V YT +K G+   A  +A E   +N+  N + P     T
Sbjct: 153 YGRIIMTSS--NSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP-----T 205
Query: 263 AAIEMLTGGSADAKATSRKPEIMADAAYYI 292
           AA  M  G   D      KP+++A    Y+
Sbjct: 206 AASRMTEGILPDILFNELKPKLIAPVVAYL 235

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 89  DKFGGIDILVNNASAISLTDTANTPLKKY-DLMNQINARGTYLVKASQGLEIQSAVNAAV 147
           D+   +D+     SA +L +TA T    Y D + ++ A       A +G ++ +A+ A +
Sbjct: 27  DRVAALDL-----SAETLEETARTHWHAYADKVLRVRAD-----VADEG-DVNAAIAATM 75
Query: 148 DKFGGIDILVNNASAISLTDTA---NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA 204
           ++FG ID+LVNNA     ++      TP++++D +  +N RG +L  +  LP++      
Sbjct: 76  EQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG 135
Query: 205 HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            I+NI+   +L    F    AYT SK  +      +A ++ G  I  NA+ P
Sbjct: 136 VIVNIASVASL--VAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCP 185

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I + V+A V  FGG+D LV NA  + L    +T ++ +D +  IN RG +L ++   P 
Sbjct: 89  QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPR 148
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           + +     I+N+S              AY +SK G+   +   A E +   I  N L P 
Sbjct: 149 MIERGGGAIVNLSSL--AGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPA 206
Query: 258 ---TAIYTAAIEMLTG--GSADAKATSRK-------PEIMADAAYYILSSNPPSLTGQFL 305
              T +   A+ M  G  G+  A++   +       PE MA    ++LS +   +TG   
Sbjct: 207 FVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQ 266
Query: 306 IDD 308
           I D
Sbjct: 267 IAD 269

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53  IYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANT 112
           I + A E+ DAGG  L  ++D+ D H+V +   AAVD +G ID+LVNNA  + L+  A  
Sbjct: 41  IEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAV 100
Query: 113 PLKKYDLMNQINARG 127
            + +++ M  +N +G
Sbjct: 101 KVDEWERMIDVNIKG 115

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 144 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH 203
            AAVD +G ID+LVNNA  + L+  A   + +++ M  +N +G        LP ++    
Sbjct: 73  QAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRS 132
Query: 204 AHILNISP--PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             I+NI     L++ P        Y  +K+ +   + G+ +E    NI V  + P
Sbjct: 133 GQIINIGSIGALSVVP----TAAVYCATKFAVRAISDGLRQE--STNIRVTCVNP 181

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           S+G  ++  V+ AV + G IDILVNNA         + P +K+D +  +N    +  +  
Sbjct: 65  SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            LP++KK     I+NI+    L      N  AY  +K+G+       A E  G  I  NA
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 254 L---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV 310
           +   W RT +    I  L    A+     ++      AA  +LS   PSL  QF+  +++
Sbjct: 183 ICPGWVRTPLVEKQISAL----AEKNGVDQET-----AARELLSEKQPSL--QFVTPEQL 231

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           S+G  ++  V+ AV + G IDILVNNA         + P +K+D +  +N    +  +  
Sbjct: 65  SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            LP++KK     I+NI+    L      N  AY  +K+G+       A E  G  I  NA
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 254 L---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV 310
           +   W R+ +    I  L    A+     ++      AA  +LS   PSL  QF+  +++
Sbjct: 183 ICPGWVRSPLVEKQISAL----AEKNGVDQET-----AARELLSEKQPSL--QFVTPEQL 231

>pdb|1QND|A Chain A, Sterol Carrier Protein-2, Nmr, 20 Structures Length = 123

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 327 GAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS 386
           G  E +W +D+K               D T+TM + +F+AL  GK+ P SAF  GKLKI+
Sbjct: 44  GGKEATWVVDVKNGKGSVLPNSDK-KADCTITMADSDFLALMTGKMNPQSAFFQGKLKIT 102
Query: 387 GNLQKAMKLEKL 398
           GN+  AMKL+ L
Sbjct: 103 GNMGLAMKLQNL 114

>pdb|2C0L|B Chain B, Tpr Domain Of Human Pex5p In Complex With Human Mscp2 Length = 122

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 327 GAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS 386
           G  E +W +D+K               D T+TM + +F+AL  GK+ P SAF  GKLKI+
Sbjct: 43  GGKEATWVVDVKNGKGSVLPNSDK-KADCTITMADSDFLALMTGKMNPQSAFFQGKLKIT 101
Query: 387 GNLQKAMKLEKL 398
           GN+  AMKL+ L
Sbjct: 102 GNMGLAMKLQNL 113

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           S+G  ++  V+ AV + G IDILVNNA         + P +K+D +  +N    +  +  
Sbjct: 65  SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            LP++KK     I+NI+    L      N  AY  +K+G+       A E  G  I  NA
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 254 L---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV 310
           +   W R  +    I  L    A+     ++      AA  +LS   PSL  QF+  +++
Sbjct: 183 ICPGWVRAPLVEKQISAL----AEKNGVDQET-----AARELLSEKQPSL--QFVTPEQL 231

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 5   GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEP-------HPKLPGTIYSAA 57
           G L G   FITGA+R               +I IA     P        P  P  +   A
Sbjct: 11  GSLQGRVAFITGAARGQGRSHAVRLAAEGADI-IACDICAPVSASVTYAPASPEDLDETA 69
Query: 58  KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
           + VED G   L  ++D+RD+ A++  V   +++FG +D++V NA  +S         +++
Sbjct: 70  RLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQW 129
Query: 118 DLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
           D +  +N  GT+         +++ V A ++   G  I+V ++SA
Sbjct: 130 DTVIGVNLTGTWRT-------LRATVPAMIEAGNGGSIVVVSSSA 167

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           EI        D+FGG DILVNNA    +    + P++++D +  +N   ++   +  +P 
Sbjct: 90  EIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPP 149
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            KK     I+NI+    L    FK+  AY  +K+G+      +A E     + VN++ P
Sbjct: 150 XKKKGWGRIINIASAHGLVASPFKS--AYVAAKHGIXGLTKTVALEVAESGVTVNSICP 206

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E++  + A  +KFG +D +VN A           PL ++  + ++N  GTY V ++    
Sbjct: 85  EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL--- 254
           L++S++  I+NI   L +      N  AY  SK G++     +A+E+    I VN +   
Sbjct: 145 LRESDNPSIINIG-SLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPG 203
Query: 255 WPRTAIYTAAIE-------MLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID 307
           W RT +  A          ML          +  PE +   A ++ S     +TGQ +  
Sbjct: 204 WYRTKMTEAVFSDPEKLDYML---KRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFV 260
Query: 308 D 308
           D
Sbjct: 261 D 261

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 33/197 (16%)
Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 190
           V  ++   + +A+  A+D  GG D+L  NA   ++    +   +++D    +NARG +L 
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 191 SQ-KCLPYLKKSNHAHILN-------ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
           +Q  C  +L  +    I+N       +  PL  +         Y+ SK+ +      +A 
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAH---------YSASKFAVFGWTQALAR 175
Query: 243 EFKGDNIAVNALWP---------RTAIYTAAIEMLTGGSADAKATS-------RKPEIMA 286
           E    NI VN + P         R  I+ A +  +T  +  A+  S        +PE +A
Sbjct: 176 EMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVA 235
Query: 287 DAAYYILSSNPPSLTGQ 303
           D   ++ S     +TGQ
Sbjct: 236 DVVVFLASDAARFMTGQ 252

>pdb|1C44|A Chain A, Sterol Carrier Protein 2 (Scp2) From Rabbit Length = 123

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 327 GAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS 386
           G  E +W +D+K               D T+TM + + +AL  GK+ P SAF  GKLKI+
Sbjct: 44  GGKEATWVVDVKNGKGSVLPNSDK-KADCTITMADSDLLALMTGKMNPQSAFFQGKLKIT 102
Query: 387 GNLQKAMKLEKL 398
           GN+  AMKL+ L
Sbjct: 103 GNMGLAMKLQNL 114

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 13  FITGASRXXXXXXXXXXXXXXXNIVI--AAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            +TGASR                +VI  A K A             A ++E AGG  L  
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAE--------EVAGKIEAAGGKALTA 82
Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY- 129
             D+ D  AV+     A + FGG+D+LVNNA    LT  A T    +D +  +N +GT+ 
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFN 142
Query: 130 -LVKASQGLEI 139
            L +A+Q L +
Sbjct: 143 TLREAAQRLRV 153

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
           A + FGG+D+LVNNA    LT  A T    +D +  +N +GT+   ++    L+      
Sbjct: 99  AEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRII 158
Query: 206 ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             + S    L+P    ++  Y  +K G+      +++E +G +I VNA+ P
Sbjct: 159 NXSTSQVGLLHP----SYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAP 205

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 190
           V  S   + +S V     K+G +D+LVNNA   +  +    P + +D +  +N +G +L 
Sbjct: 80  VDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLC 139
Query: 191 SQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
           S+  +P  +++    I+N +     +     +  AY  SK  +S      A +   + I 
Sbjct: 140 SKYVIPVXRRNGGGSIINTTSYTATSA--IADRTAYVASKGAISSLTRAXAXDHAKEGIR 197
Query: 251 VNALWPRT 258
           VNA+ P T
Sbjct: 198 VNAVAPGT 205

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
           A +  GG+DILVNNA           P+ K++ +  +N    +  +   LP ++K     
Sbjct: 77  AAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGR 136
Query: 206 ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL---WPRTAIYT 262
           I+NI+    L      N  AY  +K+G+       A E  G  I  NA+   W RT +  
Sbjct: 137 IINIASAHGLVA--SVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVE 194
Query: 263 AAIEMLTGGSA-DAKATSRK-------------PEIMADAAYYILSSNPPSLTGQFL 305
             IE ++     D +A +R+             PE +  AA ++ S+    +TG  L
Sbjct: 195 KQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQMTGTTL 251

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 7   LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG    ITGAS                 + +AA+ ++        +   A E+   GG 
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSD-------ALQVVADEIAGVGGK 82
Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            LP   D+     V+  ++    + GGIDI V NA  +S+    + PL+++  +   N  
Sbjct: 83  ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVT 142
Query: 127 GTYLVKASQGLEIQSAVNAAVDK-FGG 152
           G +L         Q+A  A VD+  GG
Sbjct: 143 GVFLTA-------QAAARAMVDQGLGG 162

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 119 LMNQINARGTYLVKASQGLEI-QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 177
           ++ +I  RG   V     +E  +  V  A+D FG ID++VNNA  +     A    + +D
Sbjct: 79  VVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWD 138
Query: 178 LMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA 237
           ++++++ RG++ V++    ++KK  +  I+  S    +  +       Y+ +K G+   A
Sbjct: 139 IIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGI--YGNFGQANYSAAKLGLLGLA 196
Query: 238 LGMAEEFKGDNIAVNALWP 256
             +A E +  NI  N + P
Sbjct: 197 NSLAIEGRKSNIHCNTIAP 215

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           ++ +   +DK+G IDILVNNA  +     A    +++D + Q++  GT+ +S+   PY  
Sbjct: 383 EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFV 442
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           +     I+NI+    +  +       Y+ SK G+   +  MA E   +NI VN + P 
Sbjct: 443 EKQFGRIINITSTSGI--YGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 182
           INA G Y+   +    IQ+ V     + G IDILVNNA  I           ++  +  I
Sbjct: 83  INAHG-YVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDI 141
Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
           +    ++VS+  +P + K  H  I+NI     ++    +   AY  +K G+ M    +A 
Sbjct: 142 DLNAPFIVSKAVIPSMIKKGHGKIINICS--MMSELGRETVSAYAAAKGGLKMLTKNIAS 199
Query: 243 EFKGDNIAVNALWP 256
           E+   NI  N + P
Sbjct: 200 EYGEANIQCNGIGP 213

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 119 LMNQINARGTYLVKASQGLEI-QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 177
           ++ +I  RG   V     +E  +  V  A+D FG ID++VNNA  +     +    + +D
Sbjct: 58  VVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD 117
Query: 178 LMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA 237
           ++ +++ RG++ V++    + KK N+  I+  +    +  +       Y+ +K G+   A
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGI--YGNFGQANYSAAKLGLLGLA 175
Query: 238 LGMAEEFKGDNIAVNALWP 256
             +  E + +NI  N + P
Sbjct: 176 NTLVIEGRKNNIHCNTIAP 194

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 7   LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G T F+TG SR                + +    A    +      +   E+E AGG 
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQ------AVVSEIEQAGGR 82
Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D RD  A++ A+   V+  GG+DILVN+A          T +  +D +  +N R
Sbjct: 83  AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFR 142
Query: 127 GTYL 130
             ++
Sbjct: 143 APFV 146

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 13  FITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
           FITG                  + VIA+++      LP  + +A K     G  CLP  +
Sbjct: 31  FITGGGSGIGFRIAEIFMRHGCHTVIASRS------LPRVLTAARKLAGATGRRCLPLSM 84
Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
           D+R   AV +AV+ A+ +FG IDIL+N A+   L          +  +  I+  GT+
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTF 141

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           + +AV+ A+ +FG IDIL+N A+   L          +  +  I+  GT+ VS+      
Sbjct: 92  VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKF 151
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
            + +   I+NI+  L       + H     +K  +      +A E+   NI VN+L P  
Sbjct: 152 FRDHGGVIVNITATLGNRGQALQVHAGS--AKAAVDAMTRHLAVEWGPQNIRVNSLAPGP 209
Query: 259 AIYTAAIEMLTG--GSADAKATS-------RKPEIMADAAYYILSSNPPSLTGQFLIDD 308
              T  +  L G   S   K T+        K EI A +  Y+ S     +TG  L+ D
Sbjct: 210 ISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEI-AHSVLYLASPLASYVTGAVLVAD 267

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILN 208
           K+G IDILVNNA     +    TP + +  +  +N  G+YL+++  +P +    H  I+N
Sbjct: 78  KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIIN 137
Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD---NIAVNALWP---RTAIYT 262
           I+   +      KN  AY  SK+ +    LG+      D    I  NA+ P    T +  
Sbjct: 138 IASVQSYAA--TKNAAAYVTSKHAL----LGLTRSVAIDYAPKIRCNAVCPGTIMTPMVI 191
Query: 263 AAIEMLTGGSADAKATSRK---------------PEIMADAAYYILSSNPPSLTGQFLID 307
            A +M  G   D  A  RK               PE +A+   ++ S     +TG  L  
Sbjct: 192 KAAKMEVG--EDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTV 249
Query: 308 D 308
           D
Sbjct: 250 D 250

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
           AV A  + FG +  LVNNA    +       L+++ L+   N  G +L  +  +P L + 
Sbjct: 68  AVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR 127
Query: 202 NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIY 261
               I+N+      NP  FK   AY  SK+G+   A     + +  N+ V  + P     
Sbjct: 128 GGGTIVNVGSLAGKNP--FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLP----- 180
Query: 262 TAAIEMLTGGSADAKATSRKPEIMADAAYYILS 294
             +++    G+   +A   KPE +A A  + L 
Sbjct: 181 -GSVDTGFAGNTPGQAWKLKPEDVAQAVLFALE 212

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
           V   +++FG ID LVNNA             + YD    +N  G + ++Q+      K  
Sbjct: 87  VREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQG 146
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             HI++I+  L   P         +++K G++     +A EF    + VNA+ P
Sbjct: 147 SGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNAVSP 200

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNI 209
           GGIDILVNNAS +      +  L  +  +  +N  GT++V++     ++ +  A  +++I
Sbjct: 79  GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISI 138
Query: 210 SPPLNLNPFWFK--NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP--------RTA 259
           +     N F+    N  AY  +K G+      +A E    NI  NA+ P        + +
Sbjct: 139 AS----NTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS 194
Query: 260 IYTAA---IEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
            +  A   +EML      A     +PE +AD   ++ S +   +TGQ L
Sbjct: 195 PHNEAFGFVEML-----QAMKGKGQPEHIADVVSFLASDDARWITGQTL 238

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 137 LEIQSA---VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           LE ++A   V+ A +  GG+D LVNNA     T       + ++ + + N    +  +++
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTRE 121
Query: 194 CLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
            +  + K+    I+NI+  + +  NP        Y  SK G+      +A+E+    I V
Sbjct: 122 AVKLMMKARFGRIVNITSVVGILGNP----GQANYVASKAGLIGFTRAVAKEYAQRGITV 177
Query: 252 NALWPRTAIYTAAIEMLTGGSADA------KATSRKPEIMADAAYYILSSNPPSLTGQFL 305
           NA+ P   I T   E L     +A           +PE +A+A  +++S     +TGQ L
Sbjct: 178 NAVAP-GFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTL 236
Query: 306 IDD 308
             D
Sbjct: 237 CVD 239

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 148 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL 207
           + FG +D+ VNNA++  L          +D    INA+     +Q+    ++K+   HI+
Sbjct: 78  ETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV 137
Query: 208 NISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM 267
           +IS   ++   + +N+    +SK  +      +A E     I VNA+    AI T A++ 
Sbjct: 138 SISSLGSIR--YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAV-SGGAIDTDALKH 194
Query: 268 LTGGS---ADAKATS---RKPEI--MADAAYYILSSNPPSLTGQFLIDD 308
                    DA+  +   R  EI  M D   +++SS    + GQ +I D
Sbjct: 195 FPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVD 243

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK--- 199
           +  AV+ FGG+D+LVNNA  +     ANT  +++D +  ++ +G +   +    Y +   
Sbjct: 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLS 164
Query: 200 ---KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
              K+    I+N S    L     + +  Y+ +K G++   L  A E     + VNA+ P
Sbjct: 165 KAGKAVDGRIINTSSGAGLQGSVGQGN--YSAAKAGIATLTLVGAAEMGRYGVTVNAIAP 222
Query: 257 --RTAI-YTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKA 313
             RT +  T   EM+   + D    +  PE ++    ++ S+    +TG+     EV   
Sbjct: 223 SARTRMTETVFAEMMA--TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVF---EVEGG 277
Query: 314 QHIDLEQYSYVPN 326
           +    E +++ P 
Sbjct: 278 KIRVAEGWAHGPQ 290

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I++    A  +FGG+DILVNNA    +      PL+ +D +  +N    +  ++  LP 
Sbjct: 65  QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG 124
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           ++  N   I+NI+    L         AY  +K+G+      +  E    N+  NA+ P
Sbjct: 125 MRARNWGRIINIASVHGL--VGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICP 181

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 129 YLVKASQGLEI----QSAVNAAVDKF----GGIDILVNNASAISLTDTANTPLKKYDLMN 180
           Y VKA  G+E+    + ++N A ++      GIDILVNNA            L  ++ + 
Sbjct: 55  YGVKA-HGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVL 113
Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
           ++N  GT+LV+Q  L  + K     I+NIS  +          V Y+ +K G+      +
Sbjct: 114 KVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG--NVGQVNYSTTKAGLIGFTKSL 171
Query: 241 AEEFKGDNIAVNALWP 256
           A+E    N+ VNA+ P
Sbjct: 172 AKELAPRNVLVNAVAP 187

>pdb|1IKT|A Chain A, Liganded Sterol Carrier Protein Type 2 (Scp-2) Like Domain Of Human Multifunctional Enzyme Type 2 (Mfe-2) Length = 120

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 306 IDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFI 365
           I  EV+K  +   E +     G     W IDLK+              D T+ +++++F+
Sbjct: 22  IGPEVVKKVNAVFE-WHITKGGNIGAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFM 80
Query: 366 ALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLM 399
            +  GKL P  AF +G+LK  GN+  + KL+ ++
Sbjct: 81  EVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMIL 114

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           Q  V  A ++FG +D LVNNA   +        ++++  + +IN  G ++  +  +P +K
Sbjct: 67  QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            +    I+NIS    L      +  +Y  SK+G+   +   A E   D I VN++ P
Sbjct: 127 DAGGGSIVNISSAAGLMGLALTS--SYGASKWGVRGLSKLAAVELGTDRIRVNSVHP 181

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 7   LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           ++G    +TGASR                + I  +  +       T+   A+E +  GG 
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLD-------TLRVVAQEAQSLGGQ 55
Query: 67  CLPCIVDIRDEHAVQSAVNAA-VDKFGGIDILVNNASA--ISLTDTAN-----TPLKKYD 118
           C+P + D   E  V+S       ++ G +D+LVNNA A   ++ +T N     TP   +D
Sbjct: 56  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115
Query: 119 LMNQINARGTY---------LVKASQGL 137
            +N +  RG Y         +V A QGL
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGL 143

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 130 LVKASQGLEIQSAVNAA-VDKFGGIDILVNNASA--ISLTDTAN-----TPLKKYDLMNQ 181
           +  +SQ  E++S       ++ G +D+LVNNA A   ++ +T N     TP   +D +N 
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119
Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA 241
           +  RG Y  S      +  +    I+ IS P +L    +  +V Y + K      A   A
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ---YMFNVPYGVGKAACDKLAADCA 176
Query: 242 EEFKGDNIAVNALWP 256
            E +   ++  +LWP
Sbjct: 177 HELRRHGVSCVSLWP 191

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           Q  V  A ++FG +D LVNNA   +        ++++  + +IN  G ++  +  +P +K
Sbjct: 67  QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            +    I+NIS    L      +  +Y  SK+G+   +   A E   D I VN++ P
Sbjct: 127 DAGGGSIVNISSAAGLMGLALTS--SYGASKWGVRGLSKLAAVELGTDRIRVNSVHP 181

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 118 DLMNQINARGTYLVKAS-----QGLEIQSAVNAAVDKF-GGIDILVNNASAISLTDTANT 171
           D + Q  ++G + V+AS        E Q  +N   + F G ++ILVNNA  +   +  + 
Sbjct: 47  DCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY 105
Query: 172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKY 231
            ++ Y L+  IN    Y +S    P+LK S   +++ IS         ++    Y  +K 
Sbjct: 106 TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKG 163
Query: 232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM 267
            M      +A E+  DNI VN + P   I T+ +EM
Sbjct: 164 AMDQLTRCLAFEWAKDNIRVNGVGP-GVIATSLVEM 198

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           +Q  + ++AV+ AV  FGG+ +LVNNA  +++    +  L ++  +  +N  G +L  + 
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRA 122
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            +  +K++    I+NIS    L       H  YT +K+ +       A E     I VN+
Sbjct: 123 VVKPMKEAGRGSIINISSIEGLAGT-VACH-GYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 254 LWP 256
           + P
Sbjct: 181 IHP 183

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 118 DLMNQINARGTYLVKAS-----QGLEIQSAVNAAVDKF-GGIDILVNNASAISLTDTANT 171
           D + Q  ++G + V+AS        E Q  +N   + F G ++ILVNNA  +   +  + 
Sbjct: 48  DCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY 106
Query: 172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKY 231
            ++ Y L+  IN    Y +S    P+LK S   +++ IS         ++    Y  +K 
Sbjct: 107 TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKG 164
Query: 232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM 267
            M      +A E+  DNI VN + P   I T+ +EM
Sbjct: 165 AMDQLTRCLAFEWAKDNIRVNGVGP-GVIATSLVEM 199

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 6   KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKL------PGTIYSAAKE 59
           +L G   FITGA+R               +IV A       P L      P  +    + 
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIV-AIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNN------ASAISLTDTANTP 113
           VE+ G   +    D+RD  ++Q+ V+ A+ +FG IDILV+N         +SLTD   + 
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSD 161
Query: 114 LKKYDLMNQINA 125
           + + +L+   +A
Sbjct: 162 ILQTNLIGAWHA 173

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 139 IQSAVNAAVDKFGGIDILVNN------ASAISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
           +Q+ V+ A+ +FG IDILV+N         +SLTD      +++  + Q N  G +   +
Sbjct: 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTD------QQWSDILQTNLIGAWHACR 175
Query: 193 KCLP-YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
             LP  +++     ++ +S  + L     ++H  Y  SK+G+    L +A E    NI V
Sbjct: 176 AVLPSMIERGQGGSVIFVSSTVGLRGAPGQSH--YAASKHGVQGLMLSLANEVGRHNIRV 233
Query: 252 NALWP 256
           N++ P
Sbjct: 234 NSVNP 238

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 18/193 (9%)
Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG- 127
           P +V       +  A+  ++ K  G  +LVN A +    +         ++  QI A G 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGK-AGCKVLVNYARSAKAAE---------EVSKQIEAYGG 51
Query: 128 ---TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
              T+    S+  ++++ +  A+D +G ID++VNNA     T        ++D +  +N 
Sbjct: 52  QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNL 111
Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAEE 243
            G +L +Q     + K     I+NI+  + L       N+ A      G S  A   A E
Sbjct: 112 TGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTA---ARE 168
Query: 244 FKGDNIAVNALWP 256
               NI VN + P
Sbjct: 169 GASRNINVNVVCP 181

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++ + V  A+ +FG +D+++NNA   +   +    L  ++ +   N  G +L S++ + Y
Sbjct: 79  DVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 198 LKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             +++   +++N+S    + P+    H  Y  SK GM +    +A E+    I VN + P
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVH--YAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 257 RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                    E        A   S        KPE +A  A ++ SS    +TG  L  D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 151 GGIDILVNNASAISLTDTANT-PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNI 209
           G  D+LVNNA         +T    ++D +  +N +  YL+ +   P +  +   HI+NI
Sbjct: 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINI 164
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLT 269
           S     NP    +  AYT SK+G++      AEE +   + V+ + P + + T   E   
Sbjct: 165 SSLAGKNP--VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGS-VRT---EFGV 218
Query: 270 GGSADAKATSR-KPEIMADAAYYILSSNPPSLTGQFLI 306
           G SA   A    +P+ +AD    + +    S   + L+
Sbjct: 219 GLSAKKSALGAIEPDDIADVVALLATQADQSFISEVLV 256

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++ + V  A+ +FG +D+++NNA   +   +    L  ++ +   N  G +L S++ + Y
Sbjct: 79  DVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 198 LKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             +++   +++N+S    + P+    H  Y  SK GM +    +A E+    I VN + P
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVH--YAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 257 RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                    E        A   S        KPE +A  A ++ SS    +TG  L  D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD-TANTPLKKYDLMNQINARG 186
           T +   S   ++++ V A  ++FG ID   NNA      + T +    ++D +  IN RG
Sbjct: 68  TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRG 127
Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
            +L  +K L  +++     ++N +    +      N   Y  +K+G+       A E+  
Sbjct: 128 VFLGLEKVLKIMREQGSGMVVNTASVGGIR--GIGNQSGYAAAKHGVVGLTRNSAVEYGR 185
Query: 247 DNIAVNALWPRTAIYTAAIE 266
             I +NA+ P  AI+T  +E
Sbjct: 186 YGIRINAIAP-GAIWTPMVE 204

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++ + V  A+ +FG +D+++NNA   +   +    L  ++ +   N  G +L S++ + Y
Sbjct: 79  DVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 198 LKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             +++   +++N+S    + P+    H  Y  SK GM +    +A E+    I VN + P
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVH--YAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 257 RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                    E        A   S        KPE +A  A ++ SS    +TG  L  D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 6   KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G T  +TG+SR               NIV+    A        ++ + A+E + AG 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST------SLDATAEEFKAAGI 55
Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
           N +    D+++   V++ V  A+D FG IDILVNNA     T       K +D +   N 
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNL 115
Query: 126 RGTYL 130
           +  YL
Sbjct: 116 KSAYL 120

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++++ V  A+D FG IDILVNNA     T       K +D +   N +  YL ++     
Sbjct: 69  DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI 128
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + K     I+NI+    +          Y  SK G+      +A+EF    I  NA+ P
Sbjct: 129 MLKQKSGKIINITSIAGI--IGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAP 185

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 93  GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGL--EIQSAVNAAVDKF 150
           G  ++VN A++    +     +KK       N      VKA+ G+  +I      AV  F
Sbjct: 53  GCKVIVNYANSTESAEEVVAAIKK-------NGSDAACVKANVGVVEDIVRMFEEAVKIF 105
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL-NI 209
           G +DI+ +N+  +S     +   +++D +  IN RG + V+++   +L+      ++ +I
Sbjct: 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTA 263
           +      P     H  Y+ SK  +   A  MA +     I VN + P   +T +Y A
Sbjct: 166 TGQAKAVP----KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA 218

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           +Q  + ++AV+ AV  FGG+ +LVNNA  +++    +  L ++  +  +N  G +L  + 
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRA 122
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            +   K++    I+NIS    L       H  YT +K+ +       A E     I VN+
Sbjct: 123 VVKPXKEAGRGSIINISSIEGLAGT-VACH-GYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 254 LWP 256
           + P
Sbjct: 181 IHP 183

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNI 209
           GGIDILVNNAS +      +  L  +  +  +N  GT++V++      + +  A  +++I
Sbjct: 79  GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQXRAAGKAGRVISI 138
Query: 210 SPPLNLNPFWFK--NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP--------RTA 259
           +     N F+    N  AY  +K G+      +A E    NI  NA+ P        + +
Sbjct: 139 AS----NTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS 194
Query: 260 IYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
            +  A   +      A     +PE +AD   ++ S +   +TGQ L
Sbjct: 195 PHNEAFGFVE--XLQAXKGKGQPEHIADVVSFLASDDARWITGQTL 238

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 93  GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGL--EIQSAVNAAVDKF 150
           G  ++VN A++    +     +KK       N      VKA+ G+  +I      AV  F
Sbjct: 53  GCKVIVNYANSTESAEEVVAAIKK-------NGSDAACVKANVGVVEDIVRMFEEAVKIF 105
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL-NI 209
           G +DI+ +N+  +S     +   +++D +  IN RG + V+++   +L+      ++ +I
Sbjct: 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTA 263
           +      P     H  Y+ SK  +   A  MA +     I VN + P   +T +Y A
Sbjct: 166 TGQAKAVP----KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA 218

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +++      V+++G ID LVNNA        ++   + +D     N +GT+ ++Q     
Sbjct: 72  DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           +++ +  HI  I+         F++   Y +SK+G       M    +  N+ +  + P 
Sbjct: 132 MERQHSGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQP- 188
Query: 258 TAIYT 262
            A+YT
Sbjct: 189 GAVYT 193

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
           +D+LVNNA  I+        L ++  +  +N    +++S+     +       I+ I+  
Sbjct: 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASM 166
Query: 213 LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS 272
           L+      +N  AY  SK+ +      +A E+ G  + VNAL P   +      +     
Sbjct: 167 LSFQGG--RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDE 224
Query: 273 ADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
             A+ T+R        PE M   A ++ S     + GQ L  D
Sbjct: 225 RAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVD 267

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +++    A+++FG +  + + A       + N PL+ ++ + ++N  G++LV++K    L
Sbjct: 67  VEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL 126
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP-- 256
           ++     ++       L  F   +   Y   K G+   A  +A E     + VN L P  
Sbjct: 127 EEGG--SLVLTGSVAGLGAFGLAH---YAAGKLGVVGLARTLALELARKGVRVNVLLPGL 181
Query: 257 -----RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD 308
                   +   A E   G S   +A   +PE +A AA ++LS     +TGQ L  D
Sbjct: 182 IQTPMTAGLPPWAWEQEVGASPLGRAG--RPEEVAQAALFLLSEESAYITGQALYVD 236

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL--KKYDLMNQINARG 186
           ++V  +  + +++ ++  +D FG +DI+ NNA+     D   T +    +D    +NARG
Sbjct: 62  HVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARG 121
Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
           T L+ +  +P L  +    I+NIS       +      AY  +K  +      +A ++  
Sbjct: 122 TMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMST--AYACTKAAIETLTRYVATQYGR 179
Query: 247 DNIAVNALWPRTAIYTAAIEM-LTGGSADAKATSR------KPEIMADAAYYILSSNPPS 299
             +  NA+ P   + T  +E+ L     D  AT        +P  +A+   ++ S     
Sbjct: 180 HGVRCNAIAPGL-VRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAF 238
Query: 300 LTGQFLIDDEVLKAQHIDLEQ 320
           +TGQ +  D  L A    L Q
Sbjct: 239 ITGQVIAADSGLLAHLPGLPQ 259

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 13/214 (6%)
Query: 104 ISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI 163
           I++ D    P  +  + N      T     SQ  ++++     +  FG  DILVNNA   
Sbjct: 34  IAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY 93
Query: 164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK-- 221
            L        +++    +IN    +L+++  +P +K++    I+N++       +W K  
Sbjct: 94  PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTS----TTYWLKIE 149
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTA----AIEMLTGGSAD 274
            +  Y  +K         +A +   D I VNA+ P   RTA   A    A+  +      
Sbjct: 150 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQ 209
Query: 275 AKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD 308
           A    + P  +  AA ++ S +   +TGQ L  D
Sbjct: 210 AIPRLQVPLDLTGAAAFLASDDASFITGQTLAVD 243

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 2   INTGKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIA------AKTAEPHPKLPGTIYS 55
           + TG+++G   FI+GA+R               +I+           A PH   P  +  
Sbjct: 8   VMTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPH-STPEDLAE 66
Query: 56  AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            A  V+D     +   VD+RD  A++SAV++ V++ G +DI+V NA
Sbjct: 67  TADLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANA 112

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 5   GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAE----PHP-KLPGTIYSAAKE 59
           G L+G   FITGA+R               +I+      +    P+P   P  + +  K 
Sbjct: 9   GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKL 68
Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           VED G   +    D+RD  ++ +A+ A +D+ G +DI+V NA
Sbjct: 69  VEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANA 110

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 147 VDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLK----KS 201
           + KFG +DILVNNA        A     +++D +  +N RG YL++ K +P+ K    K 
Sbjct: 78  LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKG 137
Query: 202 NHAHILNIS------PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
               ILN++      P  NL   W+     + +S          +A E     I V AL 
Sbjct: 138 QECVILNVASTGAGRPRPNLA--WYNATKGWVVS------VTKALAIELAPAKIRVVALN 189
Query: 256 P---RTAIYTAAI----EMLTGGSADAKATSR--KPEIMADAAYYILSSNPPSLTGQFL 305
           P    T + T  +    E +     D+    R  KP+ +A+AA ++ S     +TG  L
Sbjct: 190 PVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVAL 248

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLT--DTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           Q+ V+A V +FG ID LVNNA   S+   D  +   + +D +  +N RGT   +Q  L  
Sbjct: 95  QATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKA 154
Query: 198 LKKSN---HAHILNIS--PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
              S+      I+NI+    +  +P      + Y  SK G++  + G+A       IAV 
Sbjct: 155 XLASDARASRSIINITSVSAVXTSP----ERLDYCXSKAGLAAFSQGLALRLAETGIAVF 210
Query: 253 ALWP 256
            + P
Sbjct: 211 EVRP 214

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 33/184 (17%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           ++ + AA+D+FG I +LVNNA         + P+  ++   ++N    + +SQ   P+++
Sbjct: 77  EAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQ 135
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA 259
           K+    ILNIS     N        +Y  SK  ++     +A +     I VNA+ P  A
Sbjct: 136 KAGGGAILNISSMAGENT--NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP-GA 192
Query: 260 IYTAAIEMLTGGSADAKATSRKPEI------------------MADAAYYILSSNPPSLT 301
           I T           DA AT   PEI                  +A+AA ++ S     ++
Sbjct: 193 IKT-----------DALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWIS 241
Query: 302 GQFL 305
           GQ L
Sbjct: 242 GQVL 245

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
            DIL+NNA          T  + +D    +NA+  + + Q+ L  L+  +++ I+NIS  
Sbjct: 92  FDILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFFIIQQALSRLR--DNSRIINISSA 149
Query: 213 LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS 272
                    + +AY+ +K  ++     +A++     I VNA+ P         E+L+   
Sbjct: 150 AT--RISLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPX 207
Query: 273 ADAKATS-----RKPEI--MADAAYYILSSNPPSLTGQFLID 307
               AT+     R  E+  +AD A ++ S +   +TGQ LID
Sbjct: 208 XKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQ-LID 248

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
           AV++FGGID++  NA        A    ++ + +  +N  GT+   Q CL  L  S    
Sbjct: 82  AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGR 141
Query: 206 IL---NISPPLNLNPFWFKNHVAYTISKYGMSMCA-LGM----AEEFKGDNIAVNALWP 256
           ++   +I+ P+   P W         S YG +  A LG     A E     I VNA+ P
Sbjct: 142 VVLTSSITGPITGYPGW---------SHYGATKAAQLGFMRTAAIELAPHKITVNAIMP 191

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN--QINARGTYLVS 191
           SQ  E+++   A ++++G +D+LVNNA      DT    +K+ D  +   +N  G +L S
Sbjct: 88  SQESEVEALFAAVIERWGRLDVLVNNAGITR--DTLLLRMKRDDWQSVLDLNLGGVFLCS 145
Query: 192 QKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI 249
           +     + K     I+NI+  +    NP        Y+ +K G+      +A+E     I
Sbjct: 146 RAAAKIMLKQRSGRIINIASVVGEMGNP----GQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 250 AVNALWP 256
            VNA+ P
Sbjct: 202 TVNAVAP 208

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 11/179 (6%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           ++ V  AV +FGG+D   NNA A+ ++ + ++  ++ +      N    +L ++  +P +
Sbjct: 73  EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAI 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
                   L  +     +   F     Y  SK G+      +A E     I VNAL P  
Sbjct: 133 AALGGGS-LTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGG 191
Query: 259 AIYTAAIEMLTGGSADAK-------ATSR--KPEIMADAAYYILSSNPPSLTGQFLIDD 308
               A    L G + + +       A  R  +PE +A+AA Y+ S     +TG  L+ D
Sbjct: 192 TDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLAD 250

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +  V  AV+  GG+DILV+NA+      +  +   + +D +  +N + T L+++  +P +
Sbjct: 79  ERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEM 138
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           +K     +L +S     +P  F N   Y +SK  +      +A E    NI VN L P
Sbjct: 139 EKRGGGSVLIVSSVGAYHP--FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAP 194

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 5   GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIV---IAAK--TAEPH-PKLPGTIYSAAK 58
           GKL G   FITGA+R               +I+   IA K  +  P+ P  P  +    +
Sbjct: 7   GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVR 66
Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKY 117
            VE A    +  +VD RD   ++  V+  V   G +DI+V NA   +     + TP    
Sbjct: 67  LVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFR 126
Query: 118 DLMNQINARGTY 129
           D+M+ IN  GT+
Sbjct: 127 DVMD-INVTGTW 137

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
           S  D AN+ L++   +    I  +G   V++    ++ + V +A+ +FG +D+++NNA  
Sbjct: 40  SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
            +   +    L  ++ +   N  G +L S++ + Y  +++    ++N+S      P+   
Sbjct: 96  ANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
            H  Y  SK GM +    +A E+    I VN + P         E        A   S  
Sbjct: 156 VH--YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                 +PE +A  A ++ SS    +TG  L  D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 145 AAVDKF--GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK-CLPYLKKS 201
           AA D F   G DILVNNA  I   D+       +D +  +N +  +  +Q      L K 
Sbjct: 70  AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG 129
Query: 202 NHAHILNISPPLNLNPFWFKNHV---AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
               ++NI+  L+     F+  +   +YT +K+G++     +A E+    I VNA+ P  
Sbjct: 130 RSGKVVNIASLLS-----FQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGY 184
Query: 259 AIYTAAIEMLTGGSADAKAT-SRKP-------EIMADAAYYILSSNPPSLTGQFL 305
            I T   E L   +A  KA   R P       E +A AA ++ S+    + G  L
Sbjct: 185 -IETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAIL 238

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
           V  A    G +D+LVNNA+  +        L ++  + ++N      +S      ++K  
Sbjct: 68  VEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG 127
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT 262
              I+N++    L  F  + + AY  SK G+      +A +     I VNA+ P  AI T
Sbjct: 128 GGAIVNVASVQGL--FAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP-GAIAT 184
Query: 263 AAIEMLTGGSADAKATSR------------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
            A+      S D + T R            KPE +A+A  ++ S     +TG  L  D
Sbjct: 185 EAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVD 242

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 6   KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G T  ITG++R                + IA    E        I  AA  +     
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIA---- 57
Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                 +D+ D+ ++   V   +D++G IDILVNNA+   L        + YD +  IN 
Sbjct: 58  ------LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINV 111
Query: 126 RGTYLV 131
            GT  +
Sbjct: 112 SGTLFM 117

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS----NHAHILN 208
           +DILVNNA         + P+  ++ + Q+N    +   Q+ LP L++S    N A ++N
Sbjct: 106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVIN 165
Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           I     ++    + + AY  SK  +   +  +A+E  G++I VN + P
Sbjct: 166 IGSVAGISAMGEQAY-AYGPSKAALHQLSRMLAKELVGEHINVNVIAP 212

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           + +AV + V+  GG+DILVNNA  + L    +     +  M   N  G   +++  LP+L
Sbjct: 71  VDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHL 130
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
            +S    +   S    +N    +N   Y  +K+G++  +  + +E     + V  + P T
Sbjct: 131 LRSKGTVVQMSSIAGRVN---VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGT 187

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
           S  D AN+ L++   +    I  +G   V++    ++ + V +A+ +FG +D+++NNA  
Sbjct: 40  SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
            +   +    L  ++ +   N  G +L S++ + Y  +++    ++N+S      P+   
Sbjct: 96  ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
            H  Y  SK GM +    +A E+    I VN + P         E        A   S  
Sbjct: 156 VH--YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                 +PE +A  A ++ SS    +TG  L  D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
           S  D AN+ L++   +    I  +G   V++    ++ + V +A+ +FG +D+++NNA  
Sbjct: 40  SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
            +   +    L  ++ +   N  G +L S++ + Y  +++    ++N+S      P+   
Sbjct: 96  ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
            H  Y  SK GM +    +A E+    I VN + P         E        A   S  
Sbjct: 156 VH--YAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                 +PE +A  A ++ SS    +TG  L  D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
           S  D AN+ L++   +    I  +G   V++    ++ + V +A+ +FG +D+++NNA  
Sbjct: 40  SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
            +   +    L  ++ +   N  G +L S++ + Y  +++    ++N+S      P+   
Sbjct: 96  ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
            H  Y  SK GM +    +A E+    I VN + P         E        A   S  
Sbjct: 156 VH--YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
                 +PE +A  A ++ SS    +TG  L  D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTY 188
           L   +Q  ++++ V+  + +FG +D +VNNA           T  + +  + ++N  GTY
Sbjct: 60  LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 119
Query: 189 LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN 248
            +++  LPYL+KS   +++NIS    +        V Y  +K  ++     +A +     
Sbjct: 120 TLTKLALPYLRKS-QGNVINISS--LVGAIGQAQAVPYVATKGAVTAMTKALALDESPYG 176
Query: 249 IAVNALWPRTAIYTAAIEMLTGGSADAKATSRK 281
           + VN + P   I+T   E L     D +A+ R+
Sbjct: 177 VRVNCISPGN-IWTPLWEELAALMPDPRASIRE 208

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 93  GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL-VKASQGLEIQSAVNAAVDKFG 151
           G  ++VN  S+    +     LKK      + A+G  +    S+  E+ +  + AV  FG
Sbjct: 45  GASVVVNYGSSSKAAEEVVAELKK------LGAQGVAIQADISKPSEVVALFDKAVSHFG 98
Query: 152 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL-NIS 210
           G+D +++N+      D      + +D +  +N RG + V+Q+ L + ++     +  +I+
Sbjct: 99  GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA 158
Query: 211 PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             +   P    NH  Y  SK  +       A +     + VN + P
Sbjct: 159 AVMTGIP----NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP 200

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Query: 5   GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVE--- 61
           G L G    +TG +                N+VIA++  E        + SAA E++   
Sbjct: 14  GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE-------RLKSAADELQANL 66
Query: 62  --DAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
                   +P   +IR+E  V + V + +D FG I+ LVNN     L+   +   K +  
Sbjct: 67  PPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHA 126
Query: 120 MNQINARGT-YLVKA 133
           + + N  GT Y+ KA
Sbjct: 127 VLETNLTGTFYMCKA 141

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           ++S V  A D  GGIDI + NA   ++         ++D +   N  GT+       P +
Sbjct: 86  LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGM 145
Query: 199 KKSNHAHILNISPPLNLNP-FWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            K N+  I+ +S  L  +  F   ++V+      G++ CA   A +  G  I VNA+ P
Sbjct: 146 IKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCA---AHDLVGYGITVNAVAP 201

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 187
           T++V  S   +I S+      + G + ILVNNA  +  +D   T   + +   ++N    
Sbjct: 84  TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAH 143
Query: 188 YLVSQKCLPYLKKSNHAHILNIS 210
           +  ++  LP + K+NH HI+ ++
Sbjct: 144 FWTTKAFLPAMTKNNHGHIVTVA 166

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 153 IDILVNNAS-AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISP 211
           IDILVNNA  A+ +       ++ ++ M   N +G   +++  LP + + NH HI+NI  
Sbjct: 75  IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGS 134
Query: 212 PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
                P+   N   Y  +K  +   +L +  +  G  + V  + P
Sbjct: 135 TAGSWPYAGGN--VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKC-LPYLKK 200
           A   A+   G +D+LVNNA+ + +        + +D    +N R  + VSQ      + +
Sbjct: 66  ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 125
Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
                I+N+S    +    F N + Y+ +K  M+M    MA E     I VN++ P T +
Sbjct: 126 GVPGSIVNVSS--MVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP-TVV 182
Query: 261 YTAAIEMLTGGSAD----AKATSRKP-------EIMADAAYYILSSNPPSLTGQFLIDD 308
            T   +M    SAD     K   R P       E + ++  ++LS    S +G  ++ D
Sbjct: 183 LT---DMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVD 238

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           I++ + A  D+FGG+DILVNNA+            +++  + + N    + +S+  L  +
Sbjct: 73  IEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            K     I+N+     +          Y  +K G+      MA E     + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 21/136 (15%)
Query: 142 AVNAAVDKFGGIDILVNNASAI--SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           A    VD FG +D++  NA     +  DT  TP +  ++++ +N +GT    Q CL  L 
Sbjct: 109 AARTVVDAFGALDVVCANAGIFPEARLDTM-TPEQLSEVLD-VNVKGTVYTVQACLAPLT 166
Query: 200 KSNHAHIL---NISPPLNLNPFWFKNHVAYTISKYGMSMCA-LGM----AEEFKGDNIAV 251
            S    ++   +I+ P+   P W         S YG S  A LG     A E     + V
Sbjct: 167 ASGRGRVILTSSITGPVTGYPGW---------SHYGASKAAQLGFMRTAAIELAPRGVTV 217
Query: 252 NALWPRTAIYTAAIEM 267
           NA+ P   +    ++M
Sbjct: 218 NAILPGNILTEGLVDM 233

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 52  TIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN 111
           T  + A E+  AGG+ +   VD+ D   V +AV  A    GG D++VNNA     T   +
Sbjct: 38  TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIES 97
Query: 112 TPLKKYDLMNQINARGTYLVKASQGLEIQSAVNA 145
              +  D +  IN +G           IQ+AV A
Sbjct: 98  ITPEIVDKVYNINVKGVI-------WGIQAAVEA 124

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 149 KFGGIDILVNNASAI-----SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH 203
           KFG +DILVNNA A      S T TA + ++ YD    +N R    +++K +P+L  S  
Sbjct: 83  KFGKLDILVNNAGAAIPDSQSKTGTAQS-IESYDATLNLNLRSVIALTKKAVPHL-SSTK 140
Query: 204 AHILNIS---PPLNLNP-FWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             I+NIS     L+  P F +     Y+I+K  +       A +     I VN++ P
Sbjct: 141 GEIVNISSIASGLHATPDFPY-----YSIAKAAIDQYTRNTAIDLIQHGIRVNSISP 192

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 93  GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGG 152
           G  + +   +   L +T    LK      +INA    + +AS   +I   +N  + KFG 
Sbjct: 50  GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI---INTTLAKFGK 106
Query: 153 IDILVNNASAISLTDTANT--PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS 210
           IDILVNNA A     TANT  P++ Y    ++N +    ++QK   +L K+    I+N+S
Sbjct: 107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVS 165
Query: 211 PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             +   P     +  Y  +K  +       A +     + VN++ P
Sbjct: 166 -SIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSP 210

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           I++ + A  D+FGG+DILVNNA             +++  + + N    + +S+  L  +
Sbjct: 73  IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            K     I+N+     +          Y  +K G+      MA E     + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           I++ + A  D+FGG+DILVNNA             +++  + + N    + +S+  L  +
Sbjct: 73  IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            K     I+N+     +          Y  +K G+      MA E     + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           I++ + A  D+FGG+DILVNNA             +++  + + N    + +S+  L  +
Sbjct: 73  IEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            K     I+N+     +          Y  +K G+      MA E     + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS 210
           G ++ILVNNA  +   +  +   K Y+++   N    Y +SQ   P LK S + +++ +S
Sbjct: 98  GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLS 157
Query: 211 PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
                +     +   Y+ SK  ++     +A E+  DNI VN++ P
Sbjct: 158 SIAGFSA--LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5   GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIV-IAAKTAEPHPKLPGT----IYSAAKE 59
           GK+ G   FITGA+R               +I+ I         KLP +    +    ++
Sbjct: 24  GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQ 83
Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS 105
           VE  G   +   VD+RD  A+Q+AV+  V + G +DI++ NA+  S
Sbjct: 84  VEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALAS 129

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +++++++    ++G I +LVNNA   S     +  + ++  +  +N  G Y  S+  +PY
Sbjct: 67  QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 126
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN---IAVNAL 254
           + +S    I+NIS          KN  AY  SK+ +    +G+ +    D    +  NA+
Sbjct: 127 MIRSRDPSIVNISSV--QASIITKNASAYVTSKHAV----IGLTKSIALDYAPLLRCNAV 180
Query: 255 WPRT 258
            P T
Sbjct: 181 CPAT 184

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +++++++    ++G I +LVNNA   S     +  + ++  +  +N  G Y  S+  +PY
Sbjct: 60  QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN---IAVNAL 254
           + +S    I+NIS          KN  AY  SK+ +    +G+ +    D    +  NA+
Sbjct: 120 MIRSRDPSIVNISS--VQASIITKNASAYVTSKHAV----IGLTKSIALDYAPLLRCNAV 173
Query: 255 WPRT 258
            P T
Sbjct: 174 CPAT 177

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 24/178 (13%)
Query: 145 AAVDK-FGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCL---PYLK 199
           +AVD+ FG +D LVNNA  +      +   +++ +   ++N  G+ L + + +     L 
Sbjct: 96  SAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEAVRRXSRLY 155
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA 259
                 I+N+S    +     + +V Y  SK  +    +G+A E   + I VNA+ P   
Sbjct: 156 SGQGGAIVNVSSXAAILGSATQ-YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRP--- 211
Query: 260 IYTAAIEM---LTGGSADA---------KATSRKPEIMADAAYYILSSNPPSLTGQFL 305
                IE     +GG  D             +  PE +ADA  Y+LS +   +TG  L
Sbjct: 212 ---GIIETDLHASGGLPDRAREXAPSVPXQRAGXPEEVADAILYLLSPSASYVTGSIL 266

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	406
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-87
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-82
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-79
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	8e-63
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-38
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-31
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-30
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-12
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	4e-30
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-15
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	6e-30
3imf_A	257	Short chain dehydrogenase; structural genomics, in	7e-30
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-14
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-29
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-29
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	4e-29
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-29
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-28
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-28
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-28
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-28
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-28
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-28
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-20
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	7e-28
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-28
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	9e-28
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-27
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-13
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-27
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-27
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-27
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-27
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-17
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-27
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-27
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-27
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	6e-27
1xhl_A	297	Short-chain dehydrogenase/reductase family member	6e-27
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	7e-27
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	7e-27
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	5e-15
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-26
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-13
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-26
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-26
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-14
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-26
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-26
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-12
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-26
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-13
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-26
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-26
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-26
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-26
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-26
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	5e-17
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	5e-26
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-07
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-26
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	6e-26
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-12
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-26
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	8e-26
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	6e-16
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	8e-26
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	8e-26
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	6e-12
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	8e-26
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-11
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	9e-26
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	9e-26
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-17
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	9e-26
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-25
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-25
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-15
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-25
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-25
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-21
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-25
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-25
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-25
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-11
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-25
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-08
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-25
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-16
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	3e-25
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	7e-17
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-25
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-25
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-14
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-25
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-16
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-25
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-25
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-25
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-13
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-25
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-14
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-25
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-25
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	6e-14
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	5e-25
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	6e-25
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	6e-25
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	6e-18
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	7e-25
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-16
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	7e-25
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-13
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	9e-25
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	6e-18
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	9e-25
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	9e-25
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-24
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-24
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	6e-21
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-24
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-24
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-17
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-24
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-24
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-24
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-11
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-24
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-17
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-24
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-14
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-24
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-15
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-24
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-17
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-24
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-17
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-24
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-13
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-24
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-24
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	8e-24
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	9e-24
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-14
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	9e-24
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-20
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-23
1pz4_A	116	Sterol carrier protein 2; alpha and beta, lipid bi	1e-23
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-23
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-09
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-23
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-04
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-23
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-23
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-23
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	5e-15
2qzt_A	111	Sterol carrier protein 2-like 2; mosquito, fatty a	2e-23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	5e-06
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-23
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	8e-05
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-23
3rih_A	293	Short chain dehydrogenase or reductase; structural	7e-10
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-23
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	8e-05
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	4e-23
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	5e-15
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-23
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-17
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	4e-23
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-11
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-23
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-16
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	5e-23
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-08
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	7e-23
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-07
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	7e-23
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-04
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-23
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-04
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	8e-23
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-23
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-04
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	9e-23
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	6e-13
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-22
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	6e-16
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-22
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-04
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-22
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-04
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-22
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-05
1ikt_A	120	Estradiol 17 beta-dehydrogenase 4; ALFA-beta fold,	1e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-12
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-22
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-04
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-22
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-22
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	7e-10
1xq1_A	266	Putative tropinone reducatse; structural genomics,	3e-22
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-14
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-22
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-22
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-22
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	6e-13
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-22
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-10
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	6e-22
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	7e-22
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	7e-07
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	7e-22
1c44_A	123	Protein (sterol carrier protein 2); non specific l	7e-22
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	8e-22
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-11
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-21
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-18
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-21
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-05
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-21
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-10
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-21
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-21
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-21
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-21
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-11
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-21
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-15
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	6e-21
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	7e-21
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	4e-19
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	8e-21
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	5e-11
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	9e-21
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	9e-06
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	9e-21
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	9e-21
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-20
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	7e-16
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-20
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-10
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-20
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-04
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-20
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-04
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-20
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-05
3cnu_A	116	Predicted coding region AF_1534; structural GE MCS	2e-20
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-20
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-12
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	6e-20
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	7e-20
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-14
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	9e-20
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-19
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-19
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-14
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-19
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-14
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-19
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-16
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	6e-19
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	8e-19
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	9e-19
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-18
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	6e-15
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-18
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-13
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-18
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-04
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-18
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	7e-04
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-18
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-04
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-17
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-17
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-14
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-13
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-17
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	8e-12
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-16
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-04
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-16
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	5e-16
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-15
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-15
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-08
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-15
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-15
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-15
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	7e-06
3bkr_A	126	Sterol carrier protein-2 like-3; mosquito, fatty a	7e-15
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	6e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-08
2cfu_A	658	SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1	5e-07
2yhe_A	668	SEC-alkyl sulfatase; hydrolase, inversion, metallo	1e-06
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	1e-04
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	5e-04

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  266 bits (682), Expect = 1e-87
 Identities = 124/330 (37%), Positives = 168/330 (50%), Gaps = 77/330 (23%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +  LSG T+FITGASRGI           G  I + A                A++    
Sbjct: 1   SLTLSGKTLFITGASRGI-----------GLAIALRA----------------ARD---- 29

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                                        G ++ +    A S       P   +     +
Sbjct: 30  -----------------------------GANVAIA---AKSAVANPKLPGTIHSAAAAV 57

Query: 124 NARGTYLVKA-------SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
           NA G    +         +  ++++AV A VD FGGIDILVNNASAI L  T +TP+K++
Sbjct: 58  NAAG---GQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRF 114

Query: 177 DLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC 236
           DLM Q+NARG+++ +Q CLP+L ++ + HIL ++PP +LNP W+  H  YT++K GMS+ 
Sbjct: 115 DLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLV 174

Query: 237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN 296
            LG+A EF    +A+NALWPRT I T AI ML G  A A    R+PEIMADAA+ +L+  
Sbjct: 175 TLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAA---CRRPEIMADAAHAVLTRE 231

Query: 297 PPSLTGQFLIDDEVLKAQHI-DLEQYSYVP 325
                GQFLIDDEVL    I DL  Y+  P
Sbjct: 232 AAGFHGQFLIDDEVLAQAGITDLSGYAVDP 261

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  252 bits (647), Expect = 3e-82
 Identities = 116/328 (35%), Positives = 155/328 (47%), Gaps = 71/328 (21%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
            +  L G T+FI+G SRGI           G  I                    A +   
Sbjct: 3   GSMSLRGKTMFISGGSRGI-----------GLAIAKRV----------------AAD--- 32

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
                                         G ++ +    A S       P   Y    +
Sbjct: 33  ------------------------------GANVALV---AKSAEPHPKLPGTIYTAAKE 59

Query: 123 INARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 178
           I   G      +     G  + +AV   V++FGGIDI VNNASAI+L      PLK++DL
Sbjct: 60  IEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDL 119

Query: 179 MNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL 238
           MN I  RGTY VSQ C+P++K  ++ HIL +SPP+ L P W      Y ++KYGM++CAL
Sbjct: 120 MNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL-RPTPYMMAKYGMTLCAL 178

Query: 239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPP 298
           G+AEE +   IA N LWPRT + TAA++ L GG   A A SRKPE+ ADAAY +L+  P 
Sbjct: 179 GIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDE-AMARSRKPEVYADAAYVVLNK-PS 236

Query: 299 SLTGQFLIDDEVLKAQHI-DLEQYSYVP 325
           S TG  L+ ++VL    + DL  Y  VP
Sbjct: 237 SYTGNTLLCEDVLLESGVTDLSVYDCVP 264

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  247 bits (631), Expect = 3e-79
 Identities = 129/248 (52%), Positives = 161/248 (64%), Gaps = 15/248 (6%)

Query: 83  AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG----TYLVKASQGLE 138
           A+ AA D   G +I++    A +           Y    +I A G      +V      +
Sbjct: 62  ALKAAKD---GANIVIA---AKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ 115

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           I +AV  A+ KFGGIDILVNNASAISLT+T +TP K+ DLM  +N RGTYL S+ C+PYL
Sbjct: 116 ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYL 175

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
           KKS  AHILNISPPLNLNP WFK H AYTI+KYGMSM  LGMAEEFK   IAVNALWP+T
Sbjct: 176 KKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKT 234

Query: 259 AIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI-D 317
           AI+TAA++ML G     ++  RK +I+ADAAY I    P S TG F+ID+ +LK + I +
Sbjct: 235 AIHTAAMDMLGG--PGIESQCRKVDIIADAAYSIFQK-PKSFTGNFVIDENILKEEGIEN 291

Query: 318 LEQYSYVP 325
            + Y+  P
Sbjct: 292 FDVYAIKP 299

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  204 bits (521), Expect = 8e-63
 Identities = 95/131 (72%), Positives = 111/131 (84%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           + NTG+L+G T+FITGASRGIGKAIALKAAKDGANIVIAAKTA+PHPKL GTIY+AA+E+
Sbjct: 37  LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEI 96

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
           E  GG  LPCIVD+RDE  + +AV  A+ KFGGIDILVNNASAISLT+T +TP K+ DLM
Sbjct: 97  EAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLM 156

Query: 121 NQINARGTYLV 131
             +N RGTYL 
Sbjct: 157 MNVNTRGTYLA 167

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  137 bits (348), Expect = 3e-38
 Identities = 68/316 (21%), Positives = 115/316 (36%), Gaps = 78/316 (24%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
             ++G    +TGASRGIG+ IAL+  K GA + I  +  +       T+   A+E +  G
Sbjct: 1   APMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLD-------TLRVVAQEAQSLG 53

Query: 65  GNCLPCIVDIRDEHAVQSAVN-AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           G C+P + D   E  V+S       ++ G +D+LVNNA    +    NT           
Sbjct: 54  GQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNA-YAGVQTILNT----------- 101

Query: 124 NARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
             R     +                                      TP   +D +N + 
Sbjct: 102 --RNKAFWE--------------------------------------TPASMWDDINNVG 121

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAE 242
            RG Y  S      +  +    I+ IS P +L   F    +V Y + K      A   A 
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF----NVPYGVGKAACDKLAADCAH 177

Query: 243 EFKGDNIAVNALWP---RTAIYTAAI-------EMLTGGSADAKATSRKPEIMADAAYYI 292
           E +   ++  +LWP   +T +    +       + +      A +++   E+        
Sbjct: 178 ELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVA- 236

Query: 293 LSSNPPS--LTGQFLI 306
           L+++P    L+G+ L 
Sbjct: 237 LATDPNILSLSGKVLP 252

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  119 bits (302), Expect = 2e-31
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 7/137 (5%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIV---IAAKTAEPHPKLPGTIYSA---A 57
            GKL G   FITGA+RG G+A A++ A +GA+I+   IA K     P  P +        
Sbjct: 6   AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65

Query: 58  KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
           + VE A    +  +VD RD   ++  V+  V   G +DI+V NA   +     +   + +
Sbjct: 66  RLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDF 125

Query: 118 DLMNQINARGTYL-VKA 133
             +  IN  GT+  V A
Sbjct: 126 RDVMDINVTGTWNTVMA 142

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  118 bits (297), Expect = 1e-30
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 7/140 (5%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA---- 56
               G L G   FITGA+RG G++ A++ A +GA+I+     A     +     S     
Sbjct: 7   AGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLD 66

Query: 57  --AKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 114
             A+ VED G   L  ++D+RD+ A++  V   +++FG +D++V NA  +S         
Sbjct: 67  ETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTD 126

Query: 115 KKYDLMNQINARGTYL-VKA 133
           +++D +  +N  GT+  ++A
Sbjct: 127 EQWDTVIGVNLTGTWRTLRA 146

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 66.0 bits (162), Expect = 2e-12
 Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 4/153 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            ++  V   +++FG +D++V NA  +S         +++D +  +N  GT+   +  +P 
Sbjct: 91  ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPA 150

Query: 198 LKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + ++ +   I+ +S    L       +  Y+ SK+G++     +A E     I VN++ P
Sbjct: 151 MIEAGNGGSIVVVSSSAGLKA--TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHP 208

Query: 257 RTAIYTAAIEMLTGGSADAKATSRKPEIMADAA 289
             ++ T  IE        A+  S          
Sbjct: 209 -YSVETPMIEPEAMMEIFARHPSFVHSFPPMPV 240

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  115 bits (291), Expect = 4e-30
 Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
            G L+   + I+G    +G  +A + A+ GA++V+AA+T E        +   AK+V D 
Sbjct: 6   GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVER-------LEDVAKQVTDT 58

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQ 122
           G   L    DI D+  V   V+  +  +G +D+++NNA  + S+   ANT  +      +
Sbjct: 59  GRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT 166
           +   G   +       IQ    A  +  G +   VN  S +   
Sbjct: 119 LTVFGALRL-------IQGFTPALEESKGAV---VNVNSMVVRH 152

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 22/186 (11%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           ++   V+  +  +G +D+++NNA  + S+   ANT  +      ++   G   + Q   P
Sbjct: 74  QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            L++S  A ++N++  +  +      + AY ++K  +   +  +A E     I VN++ P
Sbjct: 134 ALEESKGA-VVNVNSMVVRHSQA--KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP 190

Query: 257 RTAIYTAAIEMLTGGSADAKATSR-----------------KPEIMADAAYYILSSNPPS 299
              I+   ++      A    TS                    + +A A  ++ S     
Sbjct: 191 -GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASG 249

Query: 300 LTGQFL 305
           +TGQ L
Sbjct: 250 ITGQAL 255

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  116 bits (292), Expect = 6e-30
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA--AKTAEPHPKLPGTIYSA---AKE 59
           G++    + +TG +RG G++ A+K A++GA+I++       E +     T         E
Sbjct: 6   GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           VE  G       VD+RD  AV   +  AV +FG +D++V NA  I     A+ P++ +  
Sbjct: 66  VEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA-GI-CPLGAHLPVQAFAD 123

Query: 120 MNQINARGTYL-VKA 133
              ++  G    V A
Sbjct: 124 AFDVDFVGVINTVHA 138

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  114 bits (289), Expect = 7e-30
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +  +    + ITG S G+GK +A + AK+GA +VI  +T E        +  A  E+E  
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK-------LEEAKLEIEQF 53

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
            G  L   +D+R+   +Q  +    +KFG IDIL+NNA+   +    +  +  ++ +  I
Sbjct: 54  PGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINI 113

Query: 124 NARGTYLV 131
              GT+  
Sbjct: 114 VLNGTFYC 121

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 71.4 bits (176), Expect = 2e-14
 Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 14/182 (7%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +IQ  +    +KFG IDIL+NNA+   +    +  +  ++ +  I   GT+  SQ    Y
Sbjct: 69  DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKY 128

Query: 198 LKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD-NIAVNALW 255
             +     +I+N+      +       +    +K G+      +A E+     I VNA+ 
Sbjct: 129 WIEKGIKGNIINMVATYAWDAGPG--VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIA 186

Query: 256 PRTAIYT--AAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLI 306
           P   I     A ++        +            PE +A  AYY+ S     + G  + 
Sbjct: 187 P-GPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMT 245

Query: 307 DD 308
            D
Sbjct: 246 MD 247

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  114 bits (288), Expect = 2e-29
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 11/141 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA------- 56
           TG++ G   F+TGA+RG G++ A++ A++GA+I+           +  T   A       
Sbjct: 6   TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLA 65

Query: 57  --AKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTP 113
             A  V+      +   VD+RD  A+++AV++ V++ G +DI+V NA           T 
Sbjct: 66  ETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTS 125

Query: 114 LKKYDLMNQINARGTYL-VKA 133
            + +  M  IN  G +  VKA
Sbjct: 126 EEDWTEMIDINLAGVWKTVKA 146

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  113 bits (285), Expect = 3e-29
 Identities = 60/315 (19%), Positives = 104/315 (33%), Gaps = 82/315 (26%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L      +TG ++ IG A     A+ GA ++IA                A +++   G 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEA-------MATKAVEDLRMEGH 62

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
           +    ++D+ +  +VQ+AV +  ++ G +DILV  A                        
Sbjct: 63  DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACA------------------------ 98

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
                                     GI I  +   A  +TD       ++     IN  
Sbjct: 99  --------------------------GICI--SEVKAEDMTD------GQWLKQVDINLN 124

Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
           G +   Q     + +     I+ I     L     +   AY  SK G+      +A E+ 
Sbjct: 125 GMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA 184

Query: 246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADAAYYILS 294
              I  NA+ P T I T    +   G    +               +P+ +A    + L+
Sbjct: 185 PHGIRANAVAP-TYIET---TLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQF-LA 239

Query: 295 SNPPS-LTGQFLIDD 308
           S+  S +TG  +  D
Sbjct: 240 SDAASLMTGAIVNVD 254

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  113 bits (286), Expect = 4e-29
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA--AKTAEPHPKLPGTIYSA---AK 58
            GK+ G   FITGA+RG G++ A+  A++GA+I+     K  +       T        +
Sbjct: 23  AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVR 82

Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKY 117
           +VE  G   +   VD+RD  A+Q+AV+  V + G +DI++ NA+ A   T       K +
Sbjct: 83  QVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTW 142

Query: 118 DLMNQINARGTYL-VKA 133
             M  +N  G ++  + 
Sbjct: 143 RDMIDVNLNGAWITARV 159

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  113 bits (286), Expect = 6e-29
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M+      G   FITG   G+GK +    +  GA  VIA++  +        + + A+++
Sbjct: 18  MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD-------VLKATAEQI 70

Query: 61  EDA-GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
               G        D+RD   VQ+ V+  +   G  +I++NNA+   ++ T       +  
Sbjct: 71  SSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKT 130

Query: 120 MNQINARGTYLV 131
           +  I   GT  V
Sbjct: 131 ITDIVLNGTAFV 142

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  112 bits (282), Expect = 1e-28
 Identities = 52/308 (16%), Positives = 94/308 (30%), Gaps = 77/308 (25%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G   G    +TG   G+G+ IA   + +G ++VI  +  +           A +     G
Sbjct: 29  GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAA------AGEIGGRTG 82

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                 + D+ D   V +   A   +F  +D+LVN                         
Sbjct: 83  NIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVN------------------------- 117

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                              NA      G      N   + L +      ++++ +   N 
Sbjct: 118 -------------------NA------GS-----NVPPVPLEEV---TFEQWNGIVAANL 144

Query: 185 RGTYLVSQKCLPYLKKSNHA--HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
            G +L +Q     +K        I+N        P    N   YT +K+ ++      A 
Sbjct: 145 TGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP--NSAPYTATKHAITGLTKSTAL 202

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----KPEIMADAAYYILSSNP 297
           + +  +IA   +       T     ++ G   A            E +A+A  Y ++S P
Sbjct: 203 DGRMHDIACGQIDI-GNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVY-MASLP 260

Query: 298 PS--LTGQ 303
            S  +   
Sbjct: 261 LSANVLTM 268

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  111 bits (281), Expect = 1e-28
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 14/138 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA--AKTAEPHPKLPGTIYSA---AK 58
            G L+G   FITGA+RG G+A A++ A DGA+I+           P    T        K
Sbjct: 8   EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVK 67

Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKK 116
            VED G   +    D+RD  ++ +A+ A +D+ G +DI+V NA  + +S  D        
Sbjct: 68  LVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDG------ 121

Query: 117 YDLMNQINARGTYL-VKA 133
           +  +  +N  G Y  +K 
Sbjct: 122 WHDVIDVNLTGVYHTIKV 139

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  112 bits (283), Expect = 2e-28
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 8/136 (5%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA------AK 58
            +L G   FITGA+RG G+  A++ A+DGA+I +A       P L     S        +
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADI-VAIDLCRQQPNLDYAQGSPEELKETVR 100

Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
            VE+ G   +    D+RD  ++Q+ V+ A+ +FG IDILV+N    +  +  +   +++ 
Sbjct: 101 LVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWS 160

Query: 119 LMNQINARGTYL-VKA 133
            + Q N  G +   +A
Sbjct: 161 DILQTNLIGAWHACRA 176

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  110 bits (278), Expect = 3e-28
 Identities = 66/316 (20%), Positives = 110/316 (34%), Gaps = 88/316 (27%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  I +TGA+RGIG A A   A  GA++V+  +T            ++  EV D    
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTE-----------ASLAEVSDQ--- 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                  I+     Q  + A       +++    A                         
Sbjct: 58  -------IKSAGQPQPLIIA-------LNLENATAQ------------------------ 79

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINAR 185
                      + +        +FG +D L++NAS I   T     P + +  +  +N  
Sbjct: 80  -----------QYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVN 128

Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEE 243
            T+++++  LP LK+S  A I   S  +       W     AY +SK+        +A+E
Sbjct: 129 ATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW----GAYGVSKFATEGLMQTLADE 184

Query: 244 FKG-DNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRK-PEIMADAAYYILSSNPP 298
            +G   +  N++ P   RT        M      D    +   PE +     Y++  +  
Sbjct: 185 LEGVTAVRANSINPGATRT-------GMRAQAYPDENPLNNPAPEDIMPVYLYLMGPDST 237

Query: 299 SLTGQFLIDDEVLKAQ 314
            + GQ       L AQ
Sbjct: 238 GINGQ------ALNAQ 247

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  110 bits (278), Expect = 4e-28
 Identities = 58/322 (18%), Positives = 108/322 (33%), Gaps = 89/322 (27%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
              +  L+     +TG   GIG+A A   AK+GA +V+A                     
Sbjct: 19  YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA--------------------- 57

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISL--TDTANTPLKKYD 118
                       D+ ++     A     ++ G        A  + +  +           
Sbjct: 58  ------------DVNED-----AAVRVANEIGS------KAFGVRVDVSSAK-------- 86

Query: 119 LMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 178
                              + +S V     K+G +D+LVNNA   +  +    P + +D 
Sbjct: 87  -------------------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDR 127

Query: 179 MNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL 238
           +  +N +G +L S+  +P ++++    I+N +     +     +  AY  SK  +S    
Sbjct: 128 IMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA--DRTAYVASKGAISSLTR 185

Query: 239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------------KPEIMA 286
            MA +   + I VNA+ P   I +     +   + D                    E +A
Sbjct: 186 AMAMDHAKEGIRVNAVAP-GTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIA 244

Query: 287 DAAYYILSSNPPSLTGQ-FLID 307
           +A  ++ S      TG    +D
Sbjct: 245 EAMLFLASDRSRFATGSILTVD 266

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  109 bits (274), Expect = 7e-28
 Identities = 20/128 (15%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           +S   I +TGA  G+G+A+ +   + G  + +  +  +             ++    G  
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQR----------LQQQELLLGNA 50

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +  + D+     V  A  AAV+  G  +++++ A             ++   + + N  
Sbjct: 51  VIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLV 110

Query: 127 GT-YLVKA 133
            T  + + 
Sbjct: 111 STILVAQQ 118

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 88.4 bits (220), Expect = 2e-20
 Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 8/169 (4%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++  A  AAV+  G  +++++ A             ++   + + N   T LV+Q+ +  
Sbjct: 63  DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRL 122

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           + +     + N+            N   Y  SK+GM      +  E K   + +  L+P 
Sbjct: 123 IGERG-GVLANVLSSAAQVG--KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYP- 178

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPS-LTGQFL 305
           + I +   E          +    PE  A      L +     +T  F+
Sbjct: 179 SGIRS---EFWDNTDHVDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI 224

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  109 bits (276), Expect = 7e-28
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 10/134 (7%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI---AAKTAEPHPKLPGTIYSAA 57
           +     L    I I G  + +G   A   A +  N+V+    AK ++   KL        
Sbjct: 3   LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKL-------K 55

Query: 58  KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
            E+ED G        D+ +E  V    + A  +FG +DI +N    +       T   ++
Sbjct: 56  DELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEF 115

Query: 118 DLMNQINARGTYLV 131
           D M+ IN +  Y  
Sbjct: 116 DAMDTINNKVAYFF 129

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  110 bits (276), Expect = 7e-28
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 6/131 (4%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           +     L     FITG   GIG  IA    + G + VIA+++     ++      A K  
Sbjct: 19  LFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLP---RVLTA---ARKLA 72

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
              G  CLP  +D+R   AV +AV+ A+ +FG IDIL+N A+   L          +  +
Sbjct: 73  GATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTV 132

Query: 121 NQINARGTYLV 131
             I+  GT+ V
Sbjct: 133 MDIDTSGTFNV 143

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  109 bits (276), Expect = 9e-28
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA------AK 58
               G T  ITG +RG+G++ A+  A+ GA+I       E    +   + +A        
Sbjct: 6   ADFEGKTALITGGARGMGRSHAVALAEAGADI-AICDRCENSDVVGYPLATADDLAETVA 64

Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            VE  G  C+   VD++D  A++S V  A D  GGIDI + NA
Sbjct: 65  LVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNA 107

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  110 bits (277), Expect = 1e-27
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 2/131 (1%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
            +  G L G    +TG + GIGKAI  +  + G+N+VIA++  E        +   A   
Sbjct: 10  YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL--QANLP 67

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                  +P   +IR+E  V + V + +D FG I+ LVNN     L+   +   K +  +
Sbjct: 68  PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 127

Query: 121 NQINARGTYLV 131
            + N  GT+ +
Sbjct: 128 LETNLTGTFYM 138

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 18/208 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E+ + V + +D FG I+ LVNN     L+   +   K +  + + N  GT+ + +     
Sbjct: 86  EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS 145

Query: 198 LKKSNHAHILNIS-PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             K +   I+NI  P     P      V    ++ G+      +A E+    I +N + P
Sbjct: 146 WMKEHGGSIVNIIVPTKAGFPL----AVHSGAARAGVYNLTKSLALEWACSGIRINCVAP 201

Query: 257 RTAIYTA-AIEMLTGGSADAKATSRK---------PEIMADAAYYILSSNPPSLTGQFLI 306
              IY+  A+E            S +         PE ++    ++LS     +TGQ + 
Sbjct: 202 -GVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVD 260

Query: 307 DD--EVLKAQHIDLEQYSYVPNGAAEGS 332
            D    L     ++  +   P GA + S
Sbjct: 261 VDGGRSLYTHSYEVPDHDNWPKGAGDLS 288

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  109 bits (274), Expect = 1e-27
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
             +L G +  ITG++RGIG+A A    ++GA + IA    E           A +   + 
Sbjct: 3   MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIE----------RARQAAAEI 52

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           G       +D+  + ++ +A+ A V+  GG+DILVNNA+   L        + Y+ +  I
Sbjct: 53  GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAI 112

Query: 124 NARGTYL 130
           N  GT  
Sbjct: 113 NVAGTLF 119

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  109 bits (274), Expect = 2e-27
 Identities = 54/292 (18%), Positives = 99/292 (33%), Gaps = 73/292 (25%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            + S  T+ ITG+S GIG+  A+  A++GAN+ I  +++E   +L  T     + +  +G
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSE---RLEET----RQIILKSG 54

Query: 65  ---GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 121
                    + D+  E      +N+ + +FG ID+LVN                      
Sbjct: 55  VSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVN---------------------- 92

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 181
                                 NA                    T   +  +  Y    +
Sbjct: 93  ----------------------NAGAAIPDAF-----------GTTGTDQGIDIYHKTLK 119

Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLN-LNPFWFKNHVAYTISKYGMSMCALGM 240
           +N +    +++K  P+L  S    I+N+S  +         + + Y I+K  +       
Sbjct: 120 LNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQP--DFLYYAIAKAALDQYTRST 176

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYI 292
           A +     I VN++ P   + T             +A+ +    MA     I
Sbjct: 177 AIDLAKFGIRVNSVSP-GMVET---GFTNAMGMPDQASQKFYNFMASHKECI 224

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  109 bits (274), Expect = 2e-27
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 7/126 (5%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            LSG    ITGAS GIGK +AL  A+ GA + +AA+ ++            A E+   GG
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQV-------VADEIAGVGG 81

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             LP   D+     V+  ++    + GGIDI V NA  +S+    + PL+++  +   N 
Sbjct: 82  KALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNV 141

Query: 126 RGTYLV 131
            G +L 
Sbjct: 142 TGVFLT 147

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  108 bits (271), Expect = 3e-27
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 12/131 (9%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M    + +G  + +TG  RGIG  I       GA +VI  K                + +
Sbjct: 1   MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDES-----------GGRAL 49

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDL 119
           E      +  + D+  E  V++ V+  + +FG +D +VNNA           T  + +  
Sbjct: 50  EQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQ 109

Query: 120 MNQINARGTYL 130
           + ++N  GTY 
Sbjct: 110 LLELNLLGTYT 120

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 19/188 (10%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
           +Q  ++++ V+  + +FG +D +VNNA           T  + +  + ++N  GTY +++
Sbjct: 64  TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK 123

Query: 193 KCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
             LPYL+KS    ++NIS  +          V Y  +K  ++     +A +     + VN
Sbjct: 124 LALPYLRKSQGN-VINISSLVGAIGQA--QAVPYVATKGAVTAMTKALALDESPYGVRVN 180

Query: 253 ALWPRTAIYTAAIEMLTGGSADAKATSR------------KPEIMADAAYYILSSNPPSL 300
            + P   I+T   E L     D +A+ R            +P  +  AA + L+S     
Sbjct: 181 CISP-GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF-LASEANFC 238

Query: 301 TGQ-FLID 307
           TG   L+ 
Sbjct: 239 TGIELLVT 246

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  107 bits (270), Expect = 4e-27
 Identities = 73/321 (22%), Positives = 112/321 (34%), Gaps = 87/321 (27%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
            +  L G    ITGA  G G+ +A + AK GA +VI                        
Sbjct: 3   GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVI------------------------ 38

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
                    VD                + G        A A++  D              
Sbjct: 39  ---------VDRDKA-----GAERVAGEIGD------AALAVA-ADI------------- 64

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQ 181
                      S+  ++ +AV AA+ KFG +DILVNNA       +      +++D +  
Sbjct: 65  -----------SKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113

Query: 182 INARGTYLVSQKCLPYLKK----SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA 237
           +N RG YL++ K +P+ K+         ILN++      P    N   Y  +K  +    
Sbjct: 114 VNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP--NLAWYNATKGWVVSVT 171

Query: 238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSAD---AKATSR-------KPEIMAD 287
             +A E     I V AL P  A  T  +    G  ++    K           KP+ +A+
Sbjct: 172 KALAIELAPAKIRVVALNP-VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAE 230

Query: 288 AAYYILSSNPPSLTGQFLIDD 308
           AA ++ S     +TG  L  D
Sbjct: 231 AAAFLCSPQASMITGVALDVD 251

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  107 bits (270), Expect = 5e-27
 Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 12/129 (9%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T +L      ITGA  GIG   +   A+ GA +V+A                 A      
Sbjct: 6   TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPET----------DLAGAAASV 55

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLMN 121
           G   +  +VD+ +E +V++ ++  +D FG +DI+ NNA  S  +        +  +D   
Sbjct: 56  GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTF 115

Query: 122 QINARGTYL 130
            +NARGT L
Sbjct: 116 TVNARGTML 124

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  107 bits (270), Expect = 5e-27
 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           + K +G    +TGA   IG A AL+ A++G  I +     E        +  A   V + 
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNRE-------ALEKAEASVREK 54

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQ 122
           G      + D+  E AV   V++ V  FG ID L NNA    +     + P   +  +  
Sbjct: 55  GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114

Query: 123 INARGTYLV 131
           IN  G + V
Sbjct: 115 INVTGAFHV 123

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  107 bits (270), Expect = 6e-27
 Identities = 56/318 (17%), Positives = 97/318 (30%), Gaps = 88/318 (27%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           KL+G    ITG + G+G+A+  +   +GA + +  K+AE             +     GG
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAE----------RLRELEVAHGG 51

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
           N +  + D+R     + A    +  FG ID L+                           
Sbjct: 52  NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIP-------------------------- 85

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD-TANTPLKKYDLMNQINA 184
                             NA +  +              L D   +     +D +  +N 
Sbjct: 86  ------------------NAGIWDYSTA-----------LADLPEDKIDAAFDDIFHVNV 116

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
           +G     + CLP L  S    ++         P        YT +K+ +      MA E 
Sbjct: 117 KGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNG--GGPLYTATKHAVVGLVRQMAFEL 173

Query: 245 KGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSR------------KPEIMADAA 289
              ++ VN + P    T +   +   L+  S  +   +               E    A 
Sbjct: 174 -APHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAY 232

Query: 290 YYILSSNPPS--LTGQFL 305
            +  ++   S   TG  L
Sbjct: 233 VF-FATRGDSLPATGALL 249

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  108 bits (271), Expect = 6e-27
 Identities = 53/292 (18%), Positives = 99/292 (33%), Gaps = 75/292 (25%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            + SG ++ ITG+S GIG++ A+  AK+GA + I  +  +   +L  T     +++  AG
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED---RLEET----KQQILKAG 74

Query: 65  G---NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 121
                    + D+ +       +N  + KFG IDILVN                      
Sbjct: 75  VPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVN---------------------- 112

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 181
                                 NA  +   G                 + P++ Y    +
Sbjct: 113 ----------------------NAGANLADGTANT-------------DQPVELYQKTFK 137

Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLN-LNPFWFKNHVAYTISKYGMSMCALGM 240
           +N +    ++QK   +L K+    I+N+S  +          +  Y  +K  +       
Sbjct: 138 LNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIVAGPQAHS--GYPYYACAKAALDQYTRCT 194

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYI 292
           A +     + VN++ P  A+ T     +        A+ +    +      I
Sbjct: 195 AIDLIQHGVRVNSVSP-GAVAT---GFMGAMGLPETASDKLYSFIGSRKECI 242

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  107 bits (270), Expect = 7e-27
 Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 10/128 (7%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
                    ITGA  GIG+A AL  A DG  +    +T          +   A E+  AG
Sbjct: 24  MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRT-------EVEEVADEIVGAG 76

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS--LTDTANTPLKKYDLMNQ 122
           G  +    D+ DE  +++AV   V KFG +DI+V NA  I+       +    ++D    
Sbjct: 77  GQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANA-GINGVWAPIDDLKPFEWDETIA 135

Query: 123 INARGTYL 130
           +N RGT+L
Sbjct: 136 VNLRGTFL 143

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  107 bits (269), Expect = 7e-27
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 14/132 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKE 59
            G+L G    +TG+ RGIG A+A+   + GA +V+    + K AE              E
Sbjct: 13  PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAE----------KVVSE 62

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           ++  G + +    DIR    +    + AV  FG +DI V+N+  +S     +   +++D 
Sbjct: 63  IKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDR 122

Query: 120 MNQINARGTYLV 131
           +  +N RG + V
Sbjct: 123 VFSLNTRGQFFV 134

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 73.8 bits (182), Expect = 5e-15
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 121 NQINARGT--YLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
           ++I A G+    +KA   Q  EI    + AV  FG +DI V+N+  +S     +   +++
Sbjct: 61  SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF 120

Query: 177 DLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC 236
           D +  +N RG + V+++   +L +     I+  S   + + F    H  Y+ SK  +   
Sbjct: 121 DRVFSLNTRGQFFVAREAYRHLTEG--GRIVLTSSNTSKD-FSVPKHSLYSGSKGAVDSF 177

Query: 237 ALGMAEEFKGDNIAVNALWP 256
               +++     I VNA+ P
Sbjct: 178 VRIFSKDCGDKKITVNAVAP 197

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  106 bits (267), Expect = 2e-26
 Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 14/135 (10%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSA 56
           M+ +  L+G T F+TG SRGIG AIA + A +GA + +    AA+ A+          + 
Sbjct: 23  MMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQ----------AV 72

Query: 57  AKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK 116
             E+E AGG  +    D RD  A++ A+   V+  GG+DILVN+A          T +  
Sbjct: 73  VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVAD 132

Query: 117 YDLMNQINARGTYLV 131
           +D +  +N R  ++ 
Sbjct: 133 FDEVMAVNFRAPFVA 147

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 69.5 bits (171), Expect = 2e-13
 Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 9/122 (7%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            I+ A+   V+  GG+DILVN+A          T +  +D +  +N R  ++  +    +
Sbjct: 95  AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRH 154

Query: 198 LKKSNHAHILNIS---PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
           L       I+ I      L   P        Y+ SK  ++    G+A +     I VN +
Sbjct: 155 LGDG--GRIITIGSNLAELVPWP----GISLYSASKAALAGLTKGLARDLGPRGITVNIV 208

Query: 255 WP 256
            P
Sbjct: 209 HP 210

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  106 bits (267), Expect = 2e-26
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
             +L G    +TGAS GIG+A AL  A++GA +V+ A+           +     E+   
Sbjct: 3   MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA-------LAELTDEIAGG 55

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS--LTDTANTPLKKYDLMN 121
           GG       D+ DE   ++ V  AV +FGG+D   NNA      + + ++  ++ +    
Sbjct: 56  GGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNA-GALGAMGEISSLSVEGWRETL 114

Query: 122 QINARGTYL 130
             N    +L
Sbjct: 115 DTNLTSAFL 123

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  106 bits (266), Expect = 2e-26
 Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 14/133 (10%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAK 58
            +  L G    +TGA RGIG+ +A++  + G  +++    + ++AE              
Sbjct: 23  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAE----------EVVA 72

Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
            ++  G +      ++     +      AV  FG +DI+ +N+  +S     +   +++D
Sbjct: 73  AIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFD 132

Query: 119 LMNQINARGTYLV 131
            +  IN RG + V
Sbjct: 133 RVFTINTRGQFFV 145

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 17/184 (9%)

Query: 121 NQINARGT--YLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
             I   G+    VKA      +I      AV  FG +DI+ +N+  +S     +   +++
Sbjct: 72  AAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEF 131

Query: 177 DLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS---PPLNLNPFWFKNHVAYTISKYGM 233
           D +  IN RG + V+++   +L+      ++ +          P     H  Y+ SK  +
Sbjct: 132 DRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVP----KHAVYSGSKGAI 185

Query: 234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYIL 293
              A  MA +     I VN + P   I T   +M      +               Y  +
Sbjct: 186 ETFARCMAIDMADKKITVNVVAP-GGIKT---DMYHAVCREYIPNGENLSNEEVDEYAAV 241

Query: 294 SSNP 297
             +P
Sbjct: 242 QWSP 245

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  105 bits (264), Expect = 2e-26
 Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 19/133 (14%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T +L      ITG + GIG+AIA + A +GA+I IA     P          A   + + 
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP---------EAEAAIRNL 52

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YD 118
           G   L    D+     V++     +  FG  DILVNNA  I        P  +     + 
Sbjct: 53  GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNA-GI----YPLIPFDELTFEQWK 107

Query: 119 LMNQINARGTYLV 131
              +IN    +L+
Sbjct: 108 KTFEINVDSGFLM 120

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  105 bits (264), Expect = 3e-26
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 15/135 (11%)

Query: 2   INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA----AKTAEPHPKLPGTIYSAA 57
           ++  + +  TI + GA R IG+A A++ A++GAN+V+     A+ A           +A 
Sbjct: 1   MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAA----------TAV 50

Query: 58  KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKK 116
            E+E  G + L    D+ +   V++A++AA DKFG I  LV+ A  +      A      
Sbjct: 51  AEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAF 110

Query: 117 YDLMNQINARGTYLV 131
           +  +  +N    +L 
Sbjct: 111 WHQVLDVNLTSLFLT 125

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 66.0 bits (162), Expect = 2e-12
 Identities = 45/199 (22%), Positives = 76/199 (38%), Gaps = 21/199 (10%)

Query: 121 NQINARGT--YLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKK 175
            +I   G     +KA  +   E+++A++AA DKFG I  LV+ A  +      A      
Sbjct: 51  AEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAF 110

Query: 176 YDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS--PPLNLNPFWFKNHVAYTISKYGM 233
           +  +  +N    +L ++  LP + K     I+  S     +         +AY  SK  +
Sbjct: 111 WHQVLDVNLTSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGP---GALAYATSKGAV 165

Query: 234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMA 286
                G+A+E  G  I VNA+ P   I T   +  T      +             E +A
Sbjct: 166 MTFTRGLAKEV-GPKIRVNAVCP-GMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVA 223

Query: 287 DAAYYILSSNPPSLTGQFL 305
               ++ S +   +TG   
Sbjct: 224 GLVAFLASDDAAYVTGACY 242

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  105 bits (264), Expect = 3e-26
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           +    I ITGAS GIG+ IA +    GA I++ A+       +       A E+ DAGG 
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAI-------ATEIRDAGGT 54

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            L  ++D+ D H+V +   AAVD +G ID+LVNNA  + L+  A   + +++ M  +N +
Sbjct: 55  ALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIK 114

Query: 127 GT-YLVKA 133
           G  + + A
Sbjct: 115 GVLWGIGA 122

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 68.7 bits (169), Expect = 3e-13
 Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 20/167 (11%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            + +   AAVD +G ID+LVNNA  + L+  A   + +++ M  +N +G        LP 
Sbjct: 67  SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI 126

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           ++      I+NI     L+         Y  +K+ +   + G+ +E    NI V      
Sbjct: 127 MEAQRSGQIINIGSIGALSV--VPTAAVYCATKFAVRAISDGLRQE--STNIRV------ 176

Query: 258 TAIYTAAIE-----MLTGGSADAKATSRK-----PEIMADAAYYILS 294
           T +    +E      +T     A   + +     P  +A A   ++ 
Sbjct: 177 TCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIE 223

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  105 bits (264), Expect = 3e-26
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 7/131 (5%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M     L+G T  +TG++RG+G A A   A  GA +++    A         +  +   +
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL-------LAESVDTL 53

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
              G +      D+ DE A+++A +    +   +DIL+NNA            L+ +  +
Sbjct: 54  TRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKV 113

Query: 121 NQINARGTYLV 131
              N    +LV
Sbjct: 114 IDTNLTSAFLV 124

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  105 bits (264), Expect = 3e-26
 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 6/125 (4%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    ITGA++GIG  IA   A  GA +V++ +                   E  G +
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAA------RRALGEQFGTD 71

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                +D+ +  A       A + FGG+D+LVNNA         +T  + +D    +N R
Sbjct: 72  VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLR 131

Query: 127 GTYLV 131
              L+
Sbjct: 132 APALL 136

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  105 bits (264), Expect = 3e-26
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 6/126 (4%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
                TI +TG +RGIG A     A  GAN+ +  ++A    +         K  ++ G 
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE------VTEKVGKEFGV 64

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                  D+ +   V   +       G I  L+ NA    +        + +  +  +N 
Sbjct: 65  KTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNV 124

Query: 126 RGTYLV 131
            G +  
Sbjct: 125 FGVFNT 130

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  104 bits (262), Expect = 4e-26
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 8/125 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L    + +TGA  GIG+AIA K A + + +V      +        +    +E+   G  
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLED-------RLNQIVQELRGMGKE 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINA 125
            L    D+  +  V+  V    + +  ID+L NNA     +T  A    + ++ +  +N 
Sbjct: 58  VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117

Query: 126 RGTYL 130
              + 
Sbjct: 118 YSAFY 122

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  104 bits (262), Expect = 4e-26
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 8/128 (6%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +      T+ + GA   IG  IA K A +G  +    +  E    L         E+E A
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPL-------VAEIEAA 54

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           GG  +   +D R+E  V + +  A D    +++ + N  A        T  + +  + ++
Sbjct: 55  GGRIVARSLDARNEDEVTAFL-NAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEM 113

Query: 124 NARGTYLV 131
                ++ 
Sbjct: 114 ACWAGFVS 121

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 79.2 bits (196), Expect = 5e-17
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 13/191 (6%)

Query: 118 DLMNQINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
            L+ +I A G       + A    E+ + +  A D    +++ + N  A        T  
Sbjct: 46  PLVAEIEAAGGRIVARSLDARNEDEVTAFL-NAADAHAPLEVTIFNVGANVNFPILETTD 104

Query: 174 KKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGM 233
           + +  + ++     ++  ++    +       I       +L         A+  +K+G+
Sbjct: 105 RVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG--GSGFAAFASAKFGL 162

Query: 234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----KPEIMADA 288
              A  MA E    NI V  L   + + TA +           A +       P  +A A
Sbjct: 163 RAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGA 222

Query: 289 AYYILSSNPPS 299
            +  L   P S
Sbjct: 223 YWQ-LYQQPKS 232

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  104 bits (261), Expect = 5e-26
 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T +L+G T  +TGA++GIGKAIA + A DGA ++++   AE           A       
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAE----------GAKAAAASI 50

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G        DI D  +V++         GGIDILVNNA
Sbjct: 51  GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNA 88

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 25/131 (19%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGTYLVSQ 192
            +++         GGIDILVNNA +I                 +  +  +N  GT++V++
Sbjct: 66  SVKALFAEIQALTGGIDILVNNA-SI----VPFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120

Query: 193 KCLPY-LKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----AEEFK 245
                         +++I+        P    N  AY  +K G+    +G     A E  
Sbjct: 121 AGTDQMRAAGKAGRVISIASNTFFAGTP----NMAAYVAAKGGV----IGFTRALATELG 172

Query: 246 GDNIAVNALWP 256
             NI  NA+ P
Sbjct: 173 KYNITANAVTP 183

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  104 bits (262), Expect = 6e-26
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TG SRG+G  IA   A+ G ++V+A++  E   +      +A K  E  G  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE------AAQKLTEKYGVE 72

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D+ +   V+  + A  +KFG +D +VN A           PL ++  + ++N  
Sbjct: 73  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 132

Query: 127 GTYLV 131
           GTY V
Sbjct: 133 GTYYV 137

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  104 bits (261), Expect = 6e-26
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 14/130 (10%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +       +TG+  GIG+A A   A++GA +V+A   AE          + AK++   GG
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAE-------AAEAVAKQIVADGG 58

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLM 120
             +   VD+ D  + ++  +  + +FGGID LVNNA AI         L       Y   
Sbjct: 59  TAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNA-AIF-GGMKLDFLLTIDPEYYKKF 116

Query: 121 NQINARGTYL 130
             +N  G   
Sbjct: 117 MSVNLDGALW 126

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 64.8 bits (159), Expect = 4e-12
 Identities = 46/202 (22%), Positives = 71/202 (35%), Gaps = 28/202 (13%)

Query: 122 QINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-- 175
           QI A G    +  V  S     ++  +  + +FGGID LVNNA AI         L    
Sbjct: 52  QIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNA-AIF-GGMKLDFLLTID 109

Query: 176 ---YDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISK 230
              Y     +N  G    ++     + K     I+N S       +         Y ++K
Sbjct: 110 PEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN-------YYGLAK 162

Query: 231 YGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPE 283
            G++     ++ E  G NI +NA+ P   I T A    T                   P+
Sbjct: 163 VGINGLTQQLSRELGGRNIRINAIAP-GPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPD 221

Query: 284 IMADAAYYILSSNPPSLTGQFL 305
            +     ++LS     +TGQ  
Sbjct: 222 DLVGMCLFLLSDEASWITGQIF 243

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  104 bits (262), Expect = 7e-26
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 10/128 (7%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           N   L+G    +TGA  GIG A+A + A +G +++ A    +          +A      
Sbjct: 23  NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGD----------AADAAATK 72

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
            G     C VD+ DE  + + V+A V  FGG+D LV NA  + L    +T ++ +D +  
Sbjct: 73  IGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIA 132

Query: 123 INARGTYL 130
           IN RG +L
Sbjct: 133 INLRGAWL 140

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  103 bits (259), Expect = 8e-26
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              ITGASRGIG+AIA   A+DG  + + A++ +   K+      A + +++ G      
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKI------AHELMQEQGVEVFYH 57

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT-Y 129
            +D+    +V+      +++FG +D++V NA             +++  M ++N  G   
Sbjct: 58  HLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWR 117

Query: 130 LVKA 133
            +KA
Sbjct: 118 TLKA 121

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 75.6 bits (187), Expect = 6e-16
 Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 24/165 (14%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            ++      +++FG +D++V NA             +++  M ++N  G +   +  L  
Sbjct: 66  SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDS 125

Query: 198 LKKSNHAHILNIS-----PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
           LK++    ++  S                    Y  +K+           E    ++   
Sbjct: 126 LKRTGGLALVTTSDVSARL--------IPYGGGYVSTKWAARALVRTFQIE--NPDVRF- 174

Query: 253 ALWPRTAIYTAAIE---MLTGGSADAKATSRKPEIMADAAYYILS 294
                  +   A++     +      +    KP+ +A+A   +L 
Sbjct: 175 -----FELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLK 214

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  103 bits (260), Expect = 8e-26
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 10/127 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T +L G    +TG + G+G  +      +GA +  +               +  +   + 
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEA----------AGQQLAAEL 50

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           G   +    D+  E      + A   + G +++LVNNA  +   D     L+ +  + +I
Sbjct: 51  GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKI 110

Query: 124 NARGTYL 130
           N    ++
Sbjct: 111 NTESVFI 117

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  104 bits (262), Expect = 8e-26
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 11/129 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G    +TG+S GIG A+A   A+ GA++ I   +     K       A    +  G 
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK-------AEHLQKTYGV 83

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA---NTPLKKYDLMNQ 122
           +      +I D  +V+  ++     FG ID+ V NA  ++ T            ++ +  
Sbjct: 84  HSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANA-GVTWTQGPEIDVDNYDSWNKIIS 142

Query: 123 INARGTYLV 131
           ++  G Y  
Sbjct: 143 VDLNGVYYC 151

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 64.5 bits (158), Expect = 6e-12
 Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 21/130 (16%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTA---NTPLKKYDLMNQINARGTYLVSQKC 194
            ++  ++     FG ID+ V NA  ++ T            ++ +  ++  G Y  S   
Sbjct: 97  SVEETISQQEKDFGTIDVFVANA-GVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNI 155

Query: 195 LPYLKKSNHAHILNIS--------PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
               KK+    ++  S         P             Y  +K   +  A  +A E+  
Sbjct: 156 GKIFKKNGKGSLIITSSISGKIVNIPQ--------LQAPYNTAKAACTHLAKSLAIEW-A 206

Query: 247 DNIAVNALWP 256
               VN + P
Sbjct: 207 PFARVNTISP 216

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  103 bits (260), Expect = 8e-26
 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 8/131 (6%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
              L G    ITGAS GIG+A A   A +GA + IAA+  E    L         E+  A
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRAL-------GDELTAA 54

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           G       +D+ D   V +AV + V+  GG+DILVNNA  + L    +     +  M   
Sbjct: 55  GAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDT 114

Query: 124 NARGT-YLVKA 133
           N  G  Y+ +A
Sbjct: 115 NLLGLMYMTRA 125

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 62.9 bits (154), Expect = 2e-11
 Identities = 32/169 (18%), Positives = 67/169 (39%), Gaps = 21/169 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            + +AV + V+  GG+DILVNNA  + L    +     +  M   N  G   +++  LP+
Sbjct: 70  GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPH 129

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           L + +   ++ +S          +N   Y  +K+G++  +  + +E     + V      
Sbjct: 130 LLR-SKGTVVQMSSIAGRVN--VRNAAVYQATKFGVNAFSETLRQEVTERGVRV------ 180

Query: 258 TAIYTAAIE-----MLTGGSADAKATSR-------KPEIMADAAYYILS 294
             I     +      +T  +       R       + + +A+A  Y ++
Sbjct: 181 VVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVT 229

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  103 bits (260), Expect = 9e-26
 Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              +TGA +GIGKAIAL+  KDG  + IA            T  + A E+  AGG+ +  
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDA-------TAKAVASEINQAGGHAVAV 56

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
            VD+ D   V +AV  A    GG D++VNNA     T   +   +  D +  IN +G   
Sbjct: 57  KVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIW 116

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  103 bits (260), Expect = 9e-26
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
             +  +L G    ITGA  GIGK IA+  A  GA++V++   A+              E+
Sbjct: 3   NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD-------AANHVVDEI 55

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
           +  GG    C  DI  E  + +  + A+ K G +DILVNNA         + P+  +   
Sbjct: 56  QQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA-GGGGPKPFDMPMADFRRA 114

Query: 121 NQINARGTYLV 131
            ++N    + +
Sbjct: 115 YELNVFSFFHL 125

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 79.1 bits (196), Expect = 5e-17
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 17/196 (8%)

Query: 122 QINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 177
           +I   G          +   E+ +  + A+ K G +DILVNNA         + P+  + 
Sbjct: 54  EIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA-GGGGPKPFDMPMADFR 112

Query: 178 LMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA 237
              ++N    + +SQ   P ++K+    IL I+     N     N  +Y  SK   S   
Sbjct: 113 RAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK--NINMTSYASSKAAASHLV 170

Query: 238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAY 290
             MA +    NI VN + P  AI T A++ +     + K           +P+ +A+AA 
Sbjct: 171 RNMAFDLGEKNIRVNGIAP-GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL 229

Query: 291 YILSSNPPS-LTGQFL 305
           + L S   S ++GQ L
Sbjct: 230 F-LCSPAASWVSGQIL 244

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  104 bits (261), Expect = 9e-26
 Identities = 55/318 (17%), Positives = 86/318 (27%), Gaps = 87/318 (27%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T +L+     ITGA+ GIG A A +   +GA + I  +  +               + + 
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKD----------VLDAAIAEI 73

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           GG  +    D  +   +         + G ID+L  NA   S+        ++YD     
Sbjct: 74  GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133

Query: 124 NARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
           N +G           +Q A+         +   V   S    T T               
Sbjct: 134 NVKGVLFT-------VQKALPLLARG-SSV---VLTGSTAGSTGTPA------------- 169

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
                                                     Y  SK  +   A     +
Sbjct: 170 ---------------------------------------FSVYAASKAALRSFARNWILD 190

Query: 244 FKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYY 291
            K   I +N L P    T                               + E +A AA +
Sbjct: 191 LKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALF 250

Query: 292 ILSSNPPS-LTGQFLIDD 308
            L+S+  S +TG  L  D
Sbjct: 251 -LASDDSSFVTGAELFVD 267

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  104 bits (261), Expect = 1e-25
 Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 11/127 (8%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            K       +TGA  G+G+A+A+  A  G  + +A +  +             +   + G
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDA----------LQETAAEIG 73

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQI 123
            + L    D+ D  +V++   A V+KFG +D+L NNA +        +    ++  +   
Sbjct: 74  DDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133

Query: 124 NARGTYL 130
           N  G +L
Sbjct: 134 NLTGPFL 140

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  103 bits (260), Expect = 1e-25
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 14/132 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKE 59
           +  L+G     TGA RGIG+ IA++  + GA++V+    ++K AE              E
Sbjct: 16  SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAE----------EVVAE 65

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           ++  G   +    DI     V +  + AV  FGG+D +++N+      D      + +D 
Sbjct: 66  LKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDK 125

Query: 120 MNQINARGTYLV 131
           +  +N RG + V
Sbjct: 126 VFNLNTRGQFFV 137

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 16/181 (8%)

Query: 118 DLMNQINARGT--YLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
           +++ ++   G     ++A  S+  E+ +  + AV  FGG+D +++N+      D      
Sbjct: 61  EVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQ 120

Query: 174 KKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS---PPLNLNPFWFKNHVAYTISK 230
           + +D +  +N RG + V+Q+ L + ++     I+  S     +   P    NH  Y  SK
Sbjct: 121 ELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIP----NHALYAGSK 174

Query: 231 YGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRKPEIMAD 287
             +       A +     + VN + P   +T ++         G        +  E +A+
Sbjct: 175 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN 234

Query: 288 A 288
            
Sbjct: 235 M 235

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  104 bits (261), Expect = 1e-25
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 9/130 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L G  + +TGAS+GIG+ +A   AK GA++V+ A++ E    L            + G 
Sbjct: 25  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKE---TL----QKVVSHCLELGA 77

Query: 66  -NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
            +       + D    +  V  A    GG+D+L+ N    +  +  +  +       ++N
Sbjct: 78  ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN 137

Query: 125 ARGT-YLVKA 133
                 L  A
Sbjct: 138 FLSYVVLTVA 147

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  103 bits (259), Expect = 2e-25
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 13/131 (9%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
                 LS   I ITGAS+ +G   AL+  + G  ++I+ +T            ++  E+
Sbjct: 19  FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH----------ASVTEL 68

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
             AG   L    D   E  + + ++    +   +  +V+NAS   L +T       +  M
Sbjct: 69  RQAGAVALYG--DFSCETGIMAFIDLLKTQTSSLRAVVHNAS-EWLAETPGEEADNFTRM 125

Query: 121 NQINARGTYLV 131
             ++    YL+
Sbjct: 126 FSVHMLAPYLI 136

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 91.9 bits (229), Expect = 2e-21
 Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 23/196 (11%)

Query: 121 NQINARGTYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 178
            ++   G   +    S    I + ++    +   +  +V+NAS   L +T       +  
Sbjct: 66  TELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNAS-EWLAETPGEEADNFTR 124

Query: 179 MNQINARGTYLVSQKCLPYLKKSNHAHILNIS--PPLNLNPFWFKNHVAYTISKYGMSMC 236
           M  ++    YL++  C P L  S  A I++IS       +      H+AY  +K G+   
Sbjct: 125 MFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS----KHIAYCATKAGLESL 180

Query: 237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAA 289
            L  A  F    + VN + P   +     +     +  A A ++         E++  + 
Sbjct: 181 TLSFAARF-APLVKVNGIAP-ALLMF---QPKDDAAYRANALAKSALGIEPGAEVIYQSL 235

Query: 290 YYILSSNPPSLTGQFL 305
            Y+L S    +TG  L
Sbjct: 236 RYLLDS--TYVTGTTL 249

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  102 bits (258), Expect = 2e-25
 Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 14/130 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED- 62
           + +L G    ITG + GIG AIA K  ++GA ++I  + ++             ++    
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD-----------VGEKAAKS 49

Query: 63  --AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                       D  DE       +A    FG +  LVNNA          T   ++  +
Sbjct: 50  VGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKL 109

Query: 121 NQINARGTYL 130
             +N  G + 
Sbjct: 110 LAVNLDGVFF 119

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  102 bits (257), Expect = 2e-25
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 10/124 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG T+ ITG +RG+G   A +A   GA +V+A    E            A    + G  
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDE----------EGAATARELGDA 52

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                +D+  E   Q  V  A ++FG +D LVNNA   +        ++++  + +IN  
Sbjct: 53  ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT 112

Query: 127 GTYL 130
           G ++
Sbjct: 113 GVFI 116

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  103 bits (258), Expect = 2e-25
 Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 10/130 (7%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M     LSG    +TG S+GIG AIA    K GA + IA               +A   V
Sbjct: 4   MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVM----------AAQAVV 53

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                      VD+    +V +A+  A+D  GG D+L  NA   ++    +   +++D  
Sbjct: 54  AGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFN 113

Query: 121 NQINARGTYL 130
             +NARG +L
Sbjct: 114 FDVNARGVFL 123

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 62.2 bits (152), Expect = 3e-11
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 23/187 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            + +A+  A+D  GG D+L  NA   ++    +   +++D    +NARG +L +Q    +
Sbjct: 72  SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRH 131

Query: 198 LKKSNHA-HILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA- 253
              SN    I+N +        P        Y+ SK+ +      +A E    NI VN  
Sbjct: 132 FLASNTKGVIVNTASLAAKVGAP----LLAHYSASKFAVFGWTQALAREMAPKNIRVNCV 187

Query: 254 --------LWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPP 298
                   +  R  I+ A +  +T  +  A+  S        +PE +AD   ++ S    
Sbjct: 188 CPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAAR 247

Query: 299 SLTGQFL 305
            +TGQ +
Sbjct: 248 FMTGQGI 254

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  102 bits (258), Expect = 2e-25
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G+LSG TI +TGA+ GIG+A     A++GA++V   +               A+ V    
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREER----------LLAEAVAALE 51

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              +  + D+ D  AV++    A+++FG +  + + A
Sbjct: 52  AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFA 88

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 40/193 (20%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
            S    +++    A+++FG +  + + A  +      +          ++ + ++N  G+
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFA-GV----AHSALSWNLPLEAWEKVLRVNLTGS 115

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGM----AE 242
           +LV++K    L++     ++       L           Y   K G+    +G+    A 
Sbjct: 116 FLVARKAGEVLEEGG--SLVLTGSVAGLGAF----GLAHYAAGKLGV----VGLARTLAL 165

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYIL 293
           E     + VN L P   I T    M  G    A              +PE +A AA + L
Sbjct: 166 ELARKGVRVNVLLP-GLIQT---PMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALF-L 220

Query: 294 SSNPPS-LTGQFL 305
            S   + +TGQ L
Sbjct: 221 LSEESAYITGQAL 233

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  102 bits (257), Expect = 3e-25
 Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 10/132 (7%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           +     L      +T ++ GIG AIA + A+DGA++V++++  E        +      +
Sbjct: 6   VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN-------VDRTVATL 58

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS--LTDTANTPLKKYD 118
           +  G +    +  +      +  V  AV+  GG+DILV+NA A++    +  +   + +D
Sbjct: 59  QGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNA-AVNPFFGNIIDATEEVWD 117

Query: 119 LMNQINARGTYL 130
            +  +N + T L
Sbjct: 118 KILHVNVKATVL 129

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 76.8 bits (190), Expect = 3e-16
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 16/182 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAIS--LTDTANTPLKKYDLMNQINARGTYLVSQKCL 195
           + +  V  AV+  GG+DILV+NA A++    +  +   + +D +  +N + T L+++  +
Sbjct: 77  DRERLVAMAVNLHGGVDILVSNA-AVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVV 135

Query: 196 PYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
           P ++K     +L +S     +P  F N   Y +SK  +      +A E    NI VN L 
Sbjct: 136 PEMEKRGGGSVLIVSSVGAYHP--FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLA 193

Query: 256 PRTAIYTAAIEMLTGGSADAKATSR--------KPEIMADAAYYILSSNPPS-LTGQFLI 306
           P   I T   ++L    A  +             PE  A    + L S   S +TG+ ++
Sbjct: 194 P-GLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSF-LCSEDASYITGETVV 251

Query: 307 DD 308
             
Sbjct: 252 VG 253

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  102 bits (257), Expect = 3e-25
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
             LSG    +TGASRGIG AIA K    GA +V+ A+  E    +        +E+  AG
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAV-------EREIVAAG 77

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G       D+    A+ +     +   G  D+LVNNA
Sbjct: 78  GEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNA 114

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 78.8 bits (195), Expect = 7e-17
 Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 14/174 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK--YDLMNQINARGTYLVSQKCL 195
            I +     +   G  D+LVNNA  +         +K   +D +  +N +  YL+ +   
Sbjct: 92  AIAAFATGVLAAHGRCDVLVNNA-GVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFA 150

Query: 196 PYLKKSNHAHILNIS--PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
           P +  +   HI+NIS     N       +  AYT SK+G++      AEE +   + V+ 
Sbjct: 151 PAMIAAKRGHIINISSLAGKNPVA----DGAAYTASKWGLNGLMTSAAEELRQHQVRVSL 206

Query: 254 LWPRTAIYTAAIEMLTGGSADAKATSR-KPEIMADAAYYILSSNPPSLTGQFLI 306
           + P  ++ T   E   G SA   A    +P+ +AD    + +    S   + L+
Sbjct: 207 VAP-GSVRT---EFGVGLSAKKSALGAIEPDDIADVVALLATQADQSFISEVLV 256

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  102 bits (257), Expect = 3e-25
 Identities = 59/318 (18%), Positives = 99/318 (31%), Gaps = 90/318 (28%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            +SG    ITG+S GIG AIA   AK+GA+IV+ A                         
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVA------------------------- 38

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS--LTDTANTPLKKYDLMNQI 123
                    R    +  A  +  +KFG           ++  +                 
Sbjct: 39  ---------RQVDRLHEAARSLKEKFGV------RVLEVAVDVATPE------------- 70

Query: 124 NARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
                          + + V +    FGG DILVNNA   S         +K+    ++ 
Sbjct: 71  --------------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELL 116

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
                 +++  +P ++      I++ +    + P W++    Y ++K  + M +  +A E
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYE--PIYNVTKAALMMFSKTLATE 174

Query: 244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------------------KPEIM 285
              DNI VN + P   I T                                     PE +
Sbjct: 175 VIKDNIRVNCINP-GLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEEL 233

Query: 286 ADAAYYILSSNPPSLTGQ 303
           A+   ++ S       G 
Sbjct: 234 ANFFVFLCSERATYSVGS 251

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  102 bits (257), Expect = 3e-25
 Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 9/124 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G T  +TG++ GIG  IA   A+ GANIV+                 A  E+   G  
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA---------PALAEIARHGVK 52

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D+ D   +++    A  +FGG+DILVNNA    +      PL+ +D +  +N  
Sbjct: 53  AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS 112

Query: 127 GTYL 130
             + 
Sbjct: 113 AVFH 116

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 72.2 bits (178), Expect = 1e-14
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 26/188 (13%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I++    A  +FGG+DILVNNA    +      PL+ +D +  +N    +  ++  LP 
Sbjct: 65  QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG 124

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM----AEEFKGDNIAVNA 253
           ++  N   I+NI+    L     K   AY  +K+G+    +G+      E    N+  NA
Sbjct: 125 MRARNWGRIINIASVHGLVGSTGK--AAYVAAKHGV----VGLTKVVGLETATSNVTCNA 178

Query: 254 LWP---RTAIYTAAIEMLTGGSADAKATSRK-------------PEIMADAAYYILSSNP 297
           + P    T +    I+       D                    PE + +   ++ S   
Sbjct: 179 ICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG 238

Query: 298 PSLTGQFL 305
             + G   
Sbjct: 239 SQVRGAAW 246

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  102 bits (256), Expect = 3e-25
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 11/131 (8%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           + +       ITGAS+GIG  IA   A DG  +V+ A++ +        +     E+  +
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQ-------NLEKVHDEIMRS 54

Query: 64  GGNCLPCIV---DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
             +    IV   DI D     + +     K+G +DILVN A A+ +  + + P+  +  +
Sbjct: 55  NKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAA-AMFMDGSLSEPVDNFRKI 113

Query: 121 NQINARGTYLV 131
            +IN    Y +
Sbjct: 114 MEINVIAQYGI 124

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 78.0 bits (193), Expect = 1e-16
 Identities = 31/185 (16%), Positives = 71/185 (38%), Gaps = 15/185 (8%)

Query: 118 DLMNQINARGTYLVKA-------SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN 170
            + ++I     ++ +        +   +  + +     K+G +DILVN A A+ +  + +
Sbjct: 46  KVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAA-AMFMDGSLS 104

Query: 171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISK 230
            P+  +  + +IN    Y + +     +K   + +I N++         F +   Y  +K
Sbjct: 105 EPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG--FADGGIYGSTK 162

Query: 231 YGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-KPEIMADAA 289
           + +   A  +  E     I V  L P   + T   +M        K     +P+ + +  
Sbjct: 163 FALLGLAESLYRELAPLGIRVTTLCP-GWVNT---DMAKKAGTPFKDEEMIQPDDLLNTI 218

Query: 290 YYILS 294
             +L+
Sbjct: 219 RCLLN 223

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  103 bits (258), Expect = 3e-25
 Identities = 48/329 (14%), Positives = 98/329 (29%), Gaps = 94/329 (28%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           +          ITG +R IG +IA++  + G  +V+  + +E           AA+ +  
Sbjct: 5   SHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE----------GAAQRLVA 54

Query: 63  A-----GGNCLPCIVDIRDEHAV----QSAVNAAVDKFGGIDILVNNASAISLTDTANTP 113
                  G+ + C  D+    ++    +  ++ +   FG  D+LVNNA            
Sbjct: 55  ELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNA------------ 102

Query: 114 LKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGI--DILVNNASAISLTDTANT 171
                                                        +      +    A  
Sbjct: 103 --------------------------------------SAYYPTPLLPGDDTNGAADAKP 124

Query: 172 PLKKYDLMNQINARGTYLVSQKCLPYLK-----KSNHAHILNISPPLNLNPFWFKNHVAY 226
              +   +   NA     + +            +S +  ++N+   +   P        Y
Sbjct: 125 IDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP--LPGFCVY 182

Query: 227 TISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK----- 281
           T++K+ +       A E    +I VNA+ P          +      + +   R+     
Sbjct: 183 TMAKHALGGLTRAAALELAPRHIRVNAVAP------GLSLLPPAMPQETQEEYRRKVPLG 236

Query: 282 -----PEIMADAAYYILSSNPPSLTGQFL 305
                   +ADA  +++S +   +TG  L
Sbjct: 237 QSEASAAQIADAIAFLVSKDAGYITGTTL 265

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  102 bits (257), Expect = 3e-25
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 15/125 (12%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIA-----AKTAEPHPKLPGTIYSAAKEVEDAGG 65
              +TG ++GIG+ I+ K A DG +I +A      + A              K +E A  
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAA----------ETIKLIEAADQ 53

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             +   +D+ D+    SA++ A +K GG D+LVNNA    +        +    +  +N 
Sbjct: 54  KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNV 113

Query: 126 RGTYL 130
              + 
Sbjct: 114 FSVFF 118

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  102 bits (257), Expect = 3e-25
 Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 15/130 (11%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  + ITG+S+GIG A A   A+ GA + +  + A  +             +   GG+
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID------ETIASMRADGGD 58

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMN 121
                 D+    A Q  V+  V KFGGID+L+NNA  +        PL +     YD + 
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGL----VGRKPLPEIDDTFYDAVM 114

Query: 122 QINARGTYLV 131
             N R   + 
Sbjct: 115 DANIRSVVMT 124

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 40/191 (20%), Positives = 66/191 (34%), Gaps = 35/191 (18%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGTYLVSQ 192
             Q  V+  V KFGGID+L+NNA  +        PL +     YD +   N R   + ++
Sbjct: 71  ACQQLVDEFVAKFGGIDVLINNAGGL----VGRKPLPEIDDTFYDAVMDANIRSVVMTTK 126

Query: 193 KCLPYLKKSNHAH-----ILNIS--PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
             LP+L  +  A      +++                   Y  +K  +        +   
Sbjct: 127 FALPHLAAAAKASGQTSAVISTGSIAGHTGG---GPGAGLYGAAKAFLHNVHKNWVDFHT 183

Query: 246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILSSN 296
            D +  N + P   + T         + D +               E MA A  +  +S+
Sbjct: 184 KDGVRFNIVSP-GTVDT---AFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLF-FASH 238

Query: 297 PPS--LTGQFL 305
             S  +TGQ L
Sbjct: 239 LASGYITGQVL 249

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  102 bits (257), Expect = 4e-25
 Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 14/129 (10%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKEVED 62
            +     +TGASRGIG AIA + A DG  +VI     A  AE            A ++E 
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAE----------EVAGKIEA 74

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
           AGG  L    D+ D  AV+     A + FGG+D+LVNNA  + LT  A T    +D +  
Sbjct: 75  AGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134

Query: 123 INARGTYLV 131
           +N +GT+  
Sbjct: 135 VNLKGTFNT 143

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 69.9 bits (172), Expect = 8e-14
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            ++     A + FGG+D+LVNNA  + LT  A T    +D +  +N +GT+   ++    
Sbjct: 91  AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQR 150

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           L+      I+N+S           ++  Y  +K G+      +++E +G +I VNA+ P
Sbjct: 151 LRVG--GRIINMSTSQVGLL--HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAP 205

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  102 bits (256), Expect = 4e-25
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 10/127 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +G+L+G    ++G +RG+G +       +GA +V      E                 + 
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDE----------EGKAMAAEL 51

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                   +D+      ++AV+ AV  FGG+ +LVNNA  +++    +  L ++  +  +
Sbjct: 52  ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDV 111

Query: 124 NARGTYL 130
           N  G +L
Sbjct: 112 NLTGVFL 118

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  102 bits (256), Expect = 4e-25
 Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 17/137 (12%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSA 56
           +          + +TG SRGIG A+   AA+ G  + +      + A+          + 
Sbjct: 18  LYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAAD----------AV 67

Query: 57  AKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDT--ANTPL 114
              + ++GG  +    D+ +   + +  +A   +FG +D LVNNA  I           +
Sbjct: 68  VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNA-GIVDYPQRVDEMSV 126

Query: 115 KKYDLMNQINARGTYLV 131
           ++ + M ++N  G+ L 
Sbjct: 127 ERIERMLRVNVTGSILC 143

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 70.7 bits (174), Expect = 6e-14
 Identities = 48/204 (23%), Positives = 82/204 (40%), Gaps = 25/204 (12%)

Query: 121 NQINARG--TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT--ANTPLK 174
             I   G     +        +I +  +A   +FG +D LVNNA  I           ++
Sbjct: 69  AAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNA-GIVDYPQRVDEMSVE 127

Query: 175 KYDLMNQINARGTYLVSQKCLPYLKKSNHAH---ILNISPPLNLNPFWFKNHVAYTISKY 231
           + + M ++N  G+ L + + +  + +        I+N+S    +       +V Y  SK 
Sbjct: 128 RIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG-SATQYVDYAASKA 186

Query: 232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM-LTGGSADAKATSRK--------- 281
            +    +G+A E   + I VNA+ P   I T   ++  +GG  D                
Sbjct: 187 AIDTFTIGLAREVAAEGIRVNAVRP-GIIET---DLHASGGLPDRAREMAPSVPMQRAGM 242

Query: 282 PEIMADAAYYILSSNPPSLTGQFL 305
           PE +ADA  Y+LS +   +TG  L
Sbjct: 243 PEEVADAILYLLSPSASYVTGSIL 266

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  102 bits (257), Expect = 5e-25
 Identities = 43/336 (12%), Positives = 86/336 (25%), Gaps = 97/336 (28%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--- 62
             +     +TGA++ +G++IA     +G  + +    +           + A  +     
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA----------AEANALSATLN 55

Query: 63  --AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                + +    D+ +      +                                     
Sbjct: 56  ARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT------------------------- 90

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA---------------ISL 165
                                 V A    +G  D+LVNNAS+                 +
Sbjct: 91  -----------------RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 133

Query: 166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYL------KKSNHAHILNISPPLNLNPFW 219
            D         DL    NA   Y + +     +       +  +  I+N+   +   P  
Sbjct: 134 GDREAMETATADLFG-SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP-- 190

Query: 220 FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATS 279
              +  YT++K  +       A E     I VN + P          ++           
Sbjct: 191 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP------GLSVLVDDMPPAVWEGH 244

Query: 280 RK----------PEIMADAAYYILSSNPPSLTGQFL 305
           R              ++D   ++ SS    +TG  +
Sbjct: 245 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCV 280

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  101 bits (255), Expect = 6e-25
 Identities = 56/316 (17%), Positives = 89/316 (28%), Gaps = 83/316 (26%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LS     +TG S GIG A      + GA +   A+  E             +  E A   
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGE-----------RLRAAESA--- 51

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                  +R          +  D                + D                  
Sbjct: 52  -------LRQRFPGARLFASVCD----------------VLDAL---------------- 72

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                      ++++   A     G   ILVNNA    ++  A T  + +    Q+    
Sbjct: 73  -----------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFS 121

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
                +  LP L+    A I+ ++  L   P    + VA + ++ G+      MA EF  
Sbjct: 122 VIHPVRAFLPQLESRADAAIVCVNSLLASQPEP--HMVATSAARAGVKNLVRSMAFEFAP 179

Query: 247 DNIAVNALWP------RTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADAA 289
             + VN +        +      A E      A   A              KP   A A 
Sbjct: 180 KGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI 239

Query: 290 YYILSSNPPSLTGQFL 305
            ++ S      TG  +
Sbjct: 240 LFLASPLSAYTTGSHI 255

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  101 bits (254), Expect = 6e-25
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G  + +TGA +GIG+         GA +V  ++T                 +      
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA-----------DLDSLVRECPG 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
             P  VD+ D  A +     A+   G +D+LVNNA+   L        + +D   ++N R
Sbjct: 54  IEPVCVDLGDWEATE----RALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLR 109

Query: 127 GTYLV 131
               V
Sbjct: 110 AVIQV 114

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 81.8 bits (203), Expect = 6e-18
 Identities = 44/179 (24%), Positives = 66/179 (36%), Gaps = 18/179 (10%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
           A   A+   G +D+LVNNA+   L        + +D   ++N R    VSQ     L   
Sbjct: 66  ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125

Query: 202 NHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
                I+N+S   +       NH  Y  +K  + M    MA E     I VNA+ P T +
Sbjct: 126 GVPGAIVNVSSQCSQRAVT--NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP-TVV 182

Query: 261 YTAAIEMLTGGSADAKATSR-----------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
            T    M     +D                 + E + +A  ++LS      TG  L  +
Sbjct: 183 MT---SMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVE 238

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  101 bits (255), Expect = 7e-25
 Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 11/129 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
               T  +TG   GIGK +A      GA+++I  +  +        +  A +E+E  G N
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDK-------LAGAVQELEALGAN 61

Query: 67  ---CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQ 122
                    DI +E     AV+A     G +  +V+ A  + ++        + +     
Sbjct: 62  GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121

Query: 123 INARGTYLV 131
           +N  GT  V
Sbjct: 122 LNVNGTMYV 130

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 77.2 bits (191), Expect = 4e-16
 Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 12/180 (6%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E   AV+A     G +  +V+ A  + ++        + +     +N  GT  V +    
Sbjct: 77  ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAR 136

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            + +      + IS     N        AY ++K  +       A+E     + VN++ P
Sbjct: 137 EMVRGGGGSFVGISSIAASNTHR--WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRP 194

Query: 257 RTAIYTAAIEMLTGGSADAKATSR--------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
              I T  +  +T  +  +   +         + E +A+ A ++LS     +TGQ +  D
Sbjct: 195 -GLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVD 253

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  101 bits (254), Expect = 7e-25
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L+     +TGA+ GIG+AIA   AK GA++V+    +E          + A  +  AGG
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG-------AEAVAAAIRQAGG 61

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
             +    ++ DE   ++ + AA+D+FG I +LVNNA         + P+  ++   ++N 
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNA-GGGGPKPFDMPMSDFEWAFKLNL 120

Query: 126 RGTYLV 131
              + +
Sbjct: 121 FSLFRL 126

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             ++ + AA+D+FG I +LVNNA         + P+  ++   ++N    + +SQ   P+
Sbjct: 75  HREAVIKAALDQFGKITVLVNNA-GGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPH 133

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           ++K+    ILNIS     N        +Y  SK  ++     +A +     I VNA+ P 
Sbjct: 134 MQKAGGGAILNISSMAGENT--NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP- 190

Query: 258 TAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFL 305
            AI T A+  +     +             + + +A+AA ++ S     ++GQ L
Sbjct: 191 GAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVL 245

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  100 bits (252), Expect = 9e-25
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 15/125 (12%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            SGL   +TGA +GIG+         GA +V   +T                 +      
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS-----------DLVSLAKECPG 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
             P  VD+ D  A +     A+   G +D+LVNNA+ + +        + +D    +N R
Sbjct: 54  IEPVCVDLGDWDATE----KALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR 109

Query: 127 GTYLV 131
             + V
Sbjct: 110 SVFQV 114

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 81.4 bits (202), Expect = 6e-18
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 18/179 (10%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY-LKK 200
           A   A+   G +D+LVNNA+ + +        + +D    +N R  + VSQ      + +
Sbjct: 66  ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 125

Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
                I+N+S  +    F   N + Y+ +K  M+M    MA E     I VN++ P T +
Sbjct: 126 GVPGSIVNVSSMVAHVTFP--NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP-TVV 182

Query: 261 YTAAIEMLTGGSADAKATSR-----------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
            T   +M    SAD +   +           + E + ++  ++LS    S +G  ++ D
Sbjct: 183 LT---DMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVD 238

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  101 bits (255), Expect = 9e-25
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 13/102 (12%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKE---- 59
           +G+L      +TG   GIG+A A+  A++GA++ I    AE            A++    
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE---------EEDAQQVKAL 94

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +E+ G   +    D+ DE   +S V+ A +  GG+DIL   A
Sbjct: 95  IEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVA 136

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  102 bits (256), Expect = 9e-25
 Identities = 43/336 (12%), Positives = 86/336 (25%), Gaps = 97/336 (28%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--- 62
             +     +TGA++ +G++IA     +G  + +    +           + A  +     
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA----------AEANALSATLN 92

Query: 63  --AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                + +    D+ +      +                                     
Sbjct: 93  ARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT------------------------- 127

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA---------------ISL 165
                                 V A    +G  D+LVNNAS+                 +
Sbjct: 128 -----------------RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 170

Query: 166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYL------KKSNHAHILNISPPLNLNPFW 219
            D         DL    NA   Y + +     +       +  +  I+N+   +   P  
Sbjct: 171 GDREAMETATADLFG-SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP-- 227

Query: 220 FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATS 279
              +  YT++K  +       A E     I VN + P          ++           
Sbjct: 228 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP------GLSVLVDDMPPAVWEGH 281

Query: 280 RK----------PEIMADAAYYILSSNPPSLTGQFL 305
           R              ++D   ++ SS    +TG  +
Sbjct: 282 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCV 317

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  101 bits (254), Expect = 1e-24
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AG 64
            +   T  ITG++ GIG AIA   AK GANIV+    A    +      +   EV   + 
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIR------TVTDEVAGLSS 75

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           G  L    D+     +   +    D+FGG DILVNNA    +    + P++++D +  +N
Sbjct: 76  GTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN 135

Query: 125 ARGTYL 130
              ++ 
Sbjct: 136 LSSSFH 141

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  100 bits (251), Expect = 1e-24
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 14/128 (10%)

Query: 11  TIFITGASRGIGKAIALKAAKDGAN-------IVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
            + ITGA +GIG+AIAL+ A+   +       +V++++TA    K+       + E    
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-------SLECRAE 56

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           G        DI D   V+      V+++G ID LVNNA        ++   + +D     
Sbjct: 57  GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNT 116

Query: 124 NARGTYLV 131
           N +GT+ +
Sbjct: 117 NLKGTFFL 124

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 90.0 bits (224), Expect = 6e-21
 Identities = 32/171 (18%), Positives = 67/171 (39%), Gaps = 10/171 (5%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +++      V+++G ID LVNNA        ++   + +D     N +GT+ ++Q     
Sbjct: 72  DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131

Query: 198 LKKSNHAHILNIS--PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
           +++ +  HI  I+             +   Y +SK+G       M    +  N+ +  + 
Sbjct: 132 MERQHSGHIFFITSVAATKAFR----HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQ 187

Query: 256 PRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI 306
           P  A+YT    M      + +A    PE +A            ++  + ++
Sbjct: 188 P-GAVYT---PMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEIIL 234

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  100 bits (251), Expect = 2e-24
 Identities = 63/317 (19%), Positives = 112/317 (35%), Gaps = 86/317 (27%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI----AAKTAEPHPKLPGTIYSAAKE 59
              L G    +TGASRGIG+AIA + A DGA + I      + AE              E
Sbjct: 2   NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAE----------ETVYE 51

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           ++  GG+      ++   H V++  ++  ++                             
Sbjct: 52  IQSNGGSAFSIGANLESLHGVEALYSSLDNEL---------------------------- 83

Query: 120 MNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 179
                                             DIL+NNA          T  + +D M
Sbjct: 84  -------------------------QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM 118

Query: 180 NQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG 239
             +NA+  + + Q+ L  L+ +  + I+NIS           + +AY+++K  ++     
Sbjct: 119 VSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRIS--LPDFIAYSMTKGAINTMTFT 174

Query: 240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADA 288
           +A++     I VNA+ P   + T   +M     +D                 + E +AD 
Sbjct: 175 LAKQLGARGITVNAILP-GFVKT---DMNAELLSDPMMKQYATTISAFNRLGEVEDIADT 230

Query: 289 AYYILSSNPPSLTGQFL 305
           A ++ S +   +TGQ +
Sbjct: 231 AAFLASPDSRWVTGQLI 247

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  100 bits (251), Expect = 2e-24
 Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 11/128 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+   I +TGAS GIG+  A+  A+ GA +++  +  E   KL       A  + +  G 
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEE---KL----RQVASHINEETGR 62

Query: 67  ---CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQ 122
                   +        Q         +  +D +++NA  +  +   +    + +  + Q
Sbjct: 63  QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQ 122

Query: 123 INARGTYL 130
           +N   T++
Sbjct: 123 VNVNATFM 130

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 79.9 bits (198), Expect = 3e-17
 Identities = 31/181 (17%), Positives = 67/181 (37%), Gaps = 17/181 (9%)

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYL 189
           +        Q         +  +D +++NA  +  +   +    + +  + Q+N   T++
Sbjct: 71  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130

Query: 190 VSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGD 247
           ++Q  LP L KS+   ++  S  +       W     AY  SK+        +A+E+   
Sbjct: 131 LTQALLPLLLKSDAGSLVFTSSSVGRQGRANW----GAYAASKFATEGMMQVLADEY-QQ 185

Query: 248 NIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQF 304
            + VN + P   RTA+  +A         +     + P  +     +++  +    TG  
Sbjct: 186 RLRVNCINPGGTRTAMRASAFP------TEDPQKLKTPADIMPLYLWLMGDDSRRKTGMT 239

Query: 305 L 305
            
Sbjct: 240 F 240

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  100 bits (251), Expect = 2e-24
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 10/130 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T + +   + ITG   G+G+A A++ A +GA + +   ++E        + ++   V + 
Sbjct: 8   TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE-------GLEASKAAVLET 60

Query: 64  G--GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLM 120
                 L  + D+ DE  V++ V A  ++FG ID   NNA        T +    ++D +
Sbjct: 61  APDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV 120

Query: 121 NQINARGTYL 130
             IN RG +L
Sbjct: 121 VSINLRGVFL 130

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  100 bits (252), Expect = 2e-24
 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 26/165 (15%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            + +     ITG+S GIG+A A+  A++GA + I  + AE        +    +++  AG
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAE-------RLEETRQQILAAG 54

Query: 65  G---NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK----- 116
               N    + D+  +      ++  + KFG +DILVNNA   ++ D+ +          
Sbjct: 55  VSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNA-GAAIPDSQSKTGTAQSIES 113

Query: 117 YDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
           YD    +N R    +        + AV       G I   VN +S
Sbjct: 114 YDATLNLNLRSVIAL-------TKKAVPHLSSTKGEI---VNISS 148

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  100 bits (252), Expect = 2e-24
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 6/98 (6%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
             + +     +TG  RGIG  IA   A  G +I I                    E+   
Sbjct: 24  MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVA------PVIAELSGL 77

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G   +    D+ D  + Q+ V+A V +FG ID LVNNA
Sbjct: 78  GARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA 115

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 42/210 (20%), Positives = 75/210 (35%), Gaps = 31/210 (14%)

Query: 118 DLMNQINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
            ++ +++  G          +     Q+ V+A V +FG ID LVNNA    +        
Sbjct: 69  PVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA---GIASIVRDDF 125

Query: 174 KK-----YDLMNQINARGTYLVSQKCLPYLKKSNHAH---ILNISPPLNLNPFWFKNHVA 225
                  +D +  +N RGT   +Q  L  +  S+      I+NI+    +        + 
Sbjct: 126 LDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT--SPERLD 183

Query: 226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR----- 280
           Y +SK G++  + G+A       IAV  + P   I +   +M    S             
Sbjct: 184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRP-GIIRS---DMTAAVSGKYDGLIESGLVP 239

Query: 281 -----KPEIMADAAYYILSSNPPSLTGQFL 305
                +PE + +    +        TG  +
Sbjct: 240 MRRWGEPEDIGNIVAGLAGGQFGFATGSVI 269

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  100 bits (251), Expect = 2e-24
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G T  +TG S+GIG AI  + A  GA +   ++  +        +    +   + G N
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK-------ELDECLEIWREKGLN 71

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINA 125
               + D+         +      F G ++ILVNNA  +   +  +   K Y+++   N 
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNF 131

Query: 126 RGTYLV 131
              Y +
Sbjct: 132 EAAYHL 137

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 138 EIQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E    +      F G ++ILVNNA  +   +  +   K Y+++   N    Y +SQ   P
Sbjct: 84  ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 143

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            LK S + +++ +S     +     +   Y+ SK  ++     +A E+  DNI VN++ P
Sbjct: 144 LLKASQNGNVIFLSSIAGFSA--LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 99.9 bits (250), Expect = 2e-24
 Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 6/127 (4%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
              L G  + ITG+S G+GK++A++ A + A +V+  ++ E          S  +E++  
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN------SVLEEIKKV 55

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           GG  +    D+  E  V + V +A+ +FG +D+++NNA   +   +    L  ++ +   
Sbjct: 56  GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDT 115

Query: 124 NARGTYL 130
           N  G +L
Sbjct: 116 NLTGAFL 122

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 71.4 bits (176), Expect = 2e-14
 Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 24/202 (11%)

Query: 121 NQINARG--TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
            +I   G     VK   +   ++ + V +A+ +FG +D+++NNA   +   +    L  +
Sbjct: 50  EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDW 109

Query: 177 DLMNQINARGTYLVSQKCLPYLKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSM 235
           + +   N  G +L S++ + Y  +++    ++N+S      P  +   V Y  SK GM +
Sbjct: 110 NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--WPLFVHYAASKGGMKL 167

Query: 236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----------KPEI 284
               +A E+    I VN + P  AI T    +     AD +  +            +PE 
Sbjct: 168 MTETLALEYAPKGIRVNNIGP-GAINT---PINAEKFADPEQRADVESMIPMGYIGEPEE 223

Query: 285 MADAAYYILSSNPPS-LTGQFL 305
           +A  A + L+S+  S +TG  L
Sbjct: 224 IAAVAAW-LASSEASYVTGITL 244

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 99.5 bits (249), Expect = 3e-24
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 13/126 (10%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G  +G  + +TG +RGIG+AIA   A++GA + +     E             +  E  G
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----------GKEVAEAIG 50

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           G       D+ DE      V  A    G +D+LVNNA+  +        L ++  + ++N
Sbjct: 51  GAFFQV--DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVN 108

Query: 125 ARGTYL 130
                 
Sbjct: 109 LTAPMH 114

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 74.8 bits (185), Expect = 2e-15
 Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E    V  A    G +D+LVNNA+  +        L ++  + ++N      +S      
Sbjct: 63  ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAARE 122

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           ++K     I+N++    L       + AY  SK G+      +A +     I VNA+ P 
Sbjct: 123 MRKVGGGAIVNVASVQGLFAEQ--ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP- 179

Query: 258 TAIYTAAIEMLTGGSADAKATSR------------KPEIMADAAYYILSSNPPS-LTGQ- 303
            AI T A+      S D + T R            KPE +A+A  + L+S   S +TG  
Sbjct: 180 GAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF-LASEKASFITGAI 238

Query: 304 FLID 307
             +D
Sbjct: 239 LPVD 242

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 99.5 bits (249), Expect = 3e-24
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 8/126 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G T  +TG SRGIG  I  + A  GA++   ++  +        +     +    G  
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-------LNDCLTQWRSKGFK 59

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINA 125
               + D+      Q  +N   + F G ++ILVNNA  +   +  +  ++ Y L+  IN 
Sbjct: 60  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF 119

Query: 126 RGTYLV 131
              Y +
Sbjct: 120 EAAYHL 125

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 79.4 bits (197), Expect = 4e-17
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 15/180 (8%)

Query: 138 EIQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E Q  +N   + F G ++ILVNNA  +   +  +  ++ Y L+  IN    Y +S    P
Sbjct: 72  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 131

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           +LK S   +++ IS               Y  +K  M      +A E+  DNI VN + P
Sbjct: 132 FLKASERGNVVFISSVSGALA--VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 189

Query: 257 ---RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPS-LTGQFL 305
               T++    I+         K   R       +P+ +A    + L     S +TGQ +
Sbjct: 190 GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAF-LCFPAASYVTGQII 248

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 98.8 bits (247), Expect = 4e-24
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 16/134 (11%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M          + ITGASRGIG+A A      G  + + A+  +   +L        + +
Sbjct: 1   MEGMKG----AVLITGASRGIGEATARLLHAKGYRVGLMARDEK---RL--------QAL 45

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                  LP   D+R+E     AV A  + FG +  LVNNA    +       L+++ L+
Sbjct: 46  AAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLV 105

Query: 121 NQINARGT-YLVKA 133
              N  G    ++ 
Sbjct: 106 LDTNLTGAFLGIRH 119

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 14/160 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +   AV A  + FG +  LVNNA    +       L+++ L+   N  G +L  +  +P 
Sbjct: 64  DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP- 256
           L +     I+N+      NP  FK   AY  SK+G+   A     + +  N+ V  + P 
Sbjct: 124 LLRRGGGTIVNVGSLAGKNP--FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181

Query: 257 --RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILS 294
              T                A      PE +A A  + L 
Sbjct: 182 SVDT-------GFAGNTPGQAWKLK--PEDVAQAVLFALE 212

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 99.2 bits (248), Expect = 4e-24
 Identities = 67/324 (20%), Positives = 105/324 (32%), Gaps = 93/324 (28%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TG++ GIG  IA   A  GA+IV+                            
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLN--------------------------- 34

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                    D   ++        + G                         DL       
Sbjct: 35  ------GFGDAAEIEKVRAGLAAQHGV------KVLYDGA-----------DL------- 64

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                  S+G  ++  V+ AV + G IDILVNNA         + P +K+D +  +N   
Sbjct: 65  -------SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSA 117

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM----AE 242
            +  +   LP++KK     I+NI+    L     K   AY  +K+G+    +G     A 
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANK--SAYVAAKHGV----VGFTKVTAL 171

Query: 243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------------------KPEI 284
           E  G  I  NA+ P   + T  +E      A+     +                   PE 
Sbjct: 172 ETAGQGITANAICPGW-VRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230

Query: 285 MADAAYYILSSNPPSLTGQFLIDD 308
           +   A ++ S     +TG  +  D
Sbjct: 231 LGGTAVFLASDAAAQITGTTVSVD 254

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 99.5 bits (249), Expect = 6e-24
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 22/106 (20%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI--------AAKTAEPHPKLPGTIYS 55
           + KL G  + ITG   GIG+A+++  AK+GANI I        A +T +           
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQ----------- 90

Query: 56  AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
               VE  G  C+    D+ DE   +  V   V + G ++ILVNN 
Sbjct: 91  ---YVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNV 133

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 98.3 bits (246), Expect = 8e-24
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 9/121 (7%)

Query: 13  FITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
            +TGAS G G AIA +    G  +     +AE   +       A           L    
Sbjct: 6   IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEET------ARTHWHAYADKVLRVRA 59

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNA---SAISLTDTANTPLKKYDLMNQINARGTY 129
           D+ DE  V +A+ A +++FG ID+LVNNA             TP++++D +  +N RG +
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119

Query: 130 L 130
           L
Sbjct: 120 L 120

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 98.8 bits (247), Expect = 9e-24
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 9/131 (6%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M     L+G T  +TGA  GIG+AIA   A+ GA+++   +T              A E+
Sbjct: 23  MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVK--------EVADEI 74

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
            D GG+    + D+ D     +     +     +D+LVNNA  I+        L ++  +
Sbjct: 75  ADGGGSAEAVVADLADLEGAANVA-EELAATRRVDVLVNNAGIIARAPAEEVSLGRWREV 133

Query: 121 NQINARGTYLV 131
             +N    +++
Sbjct: 134 LTVNLDAAWVL 144

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 70.3 bits (173), Expect = 8e-14
 Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 2/115 (1%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
            V   +     +D+LVNNA  I+        L ++  +  +N    +++S+     +   
Sbjct: 96  NVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH 155

Query: 202 NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
               I+ I+  L+      +N  AY  SK+ +      +A E+ G  + VNAL P
Sbjct: 156 GSGRIVTIASMLSF--QGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAP 208

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 98.1 bits (245), Expect = 9e-24
 Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVI--AAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           G  I +TG SRGIGK+I         + V+   A++  P            K  E  G  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP----------LKKLKEKYGDR 51

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDT-ANTPLKKYDLMNQINA 125
               + DI ++  ++  VNAAV   G ID LV NA  +          +  +  +  IN 
Sbjct: 52  FFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF 111

Query: 126 RGT-YLVKA 133
                LV  
Sbjct: 112 FSIVSLVGI 120

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 48/228 (21%), Positives = 80/228 (35%), Gaps = 27/228 (11%)

Query: 106 LTDTANTPLKKYDLMNQINARGTYLV-KASQGLEIQSAVNAAVDKFGGIDILVNNASAIS 164
           +   A +      L  +   R  Y+V   ++   ++  VNAAV   G ID LV NA  + 
Sbjct: 31  VYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLE 90

Query: 165 LTDT-ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS--PPLNLNPFWFK 221
                    +  +  +  IN      +    LP LKK+ + +++ +S          W  
Sbjct: 91  PVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-NGNVVFVSSDACNMYFSSW-- 147

Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKAT 278
              AY  SK  ++  A+ +A E     +   A+ P    T +     E +   S  A+  
Sbjct: 148 --GAYGSSKAALNHFAMTLANE--ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQL 203

Query: 279 SR-----------KPEIMADA-AYYILSSNPPSLTGQFL-IDDEVLKA 313
                           + A   A   L   P  + GQ+L  +D  L  
Sbjct: 204 KMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALAD 251

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 98.9 bits (247), Expect = 1e-23
 Identities = 58/325 (17%), Positives = 104/325 (32%), Gaps = 92/325 (28%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-- 63
            +      +TGA++ IG+AIA+K  + G  +VI    +            AA  + D   
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSA----------EAAVSLADELN 69

Query: 64  ---GGNCLPCIVDIRDEH----AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK 116
                  + C  D+ + +    + +  +N+    FG  D+LVNNASA        TPL +
Sbjct: 70  KERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASA-----FYPTPLVQ 124

Query: 117 YDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
            D  +  N +                                                + 
Sbjct: 125 GDHEDNSNGKTV--------------------------------------------ETQV 140

Query: 177 DLMNQINARGTYLVSQKCLPYLK------KSNHAHILNISPPLNLNPFWFKNHVAYTISK 230
             +   NA   +L++       K       S++  I+N+   +   P        Y + K
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP--CMAFSLYNMGK 198

Query: 231 YGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK--------- 281
           + +       A E     I VN + P          +      + K   R+         
Sbjct: 199 HALVGLTQSAALELAPYGIRVNGVAP------GVSLLPVAMGEEEKDKWRRKVPLGRREA 252

Query: 282 -PEIMADAAYYILSSNPPSLTGQFL 305
             E +ADA  +++S +   +TG  +
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSII 277

>1pz4_A Sterol carrier protein 2; alpha and beta, lipid binding protein; HET: PLM; 1.35A {Aedes aegypti} SCOP: d.106.1.1 PDB: 2ksh_A 2ksi_A* Length = 116

 Score = 93.9 bits (233), Expect = 1e-23
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 320 QYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFM 379
           ++     G    +W +DLK               +ATLTM +    A+  G L    A  
Sbjct: 37  KFRITQGGKVVKNWVMDLKNVKLVESDDAA----EATLTMEDDIMFAIGTGALPAKEAMA 92

Query: 380 TGKLKISGNLQKAMKLEKLMGALK 403
             K+++ G ++    LE  + +LK
Sbjct: 93  QDKMEVDGQVELIFLLEPFIASLK 116

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 10/101 (9%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M     L G    +TGASRGIGKAIA   A+ GA ++  A +             A    
Sbjct: 1   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSES----------GAQAIS 50

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +  G N     +++ +  ++++ + A  D+FGG+DILVNNA
Sbjct: 51  DYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA 91

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 26/136 (19%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNAS------AISLTDTANTPLKKYDLMNQINARG 186
            +    I++ + A  D+FGG+DILVNNA        + + +      +++  + + N   
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTS 117

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM---- 240
            + +S+  L  + K     I+N+   +    N         Y  +K G+    +G     
Sbjct: 118 IFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA----GQANYAAAKAGV----IGFTKSM 169

Query: 241 AEEFKGDNIAVNALWP 256
           A E     + VN + P
Sbjct: 170 AREVASRGVTVNTVAP 185

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 98.0 bits (245), Expect = 1e-23
 Identities = 59/296 (19%), Positives = 96/296 (32%), Gaps = 72/296 (24%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G    +TG SRGIG+ IA    + GA + I A+ AE            A  +  A G+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA-------CADTATRLS-AYGD 78

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
           C     D+  E   +    A  +    +DILVNNA         + P+  ++ + Q+N  
Sbjct: 79  CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVT 138

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
             +     Q L      +A+ +    +   +N  S   +                     
Sbjct: 139 SVFSC--IQQLLPLLRRSASAENPARV---INIGSVAGI---------------SAMGEQ 178

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
            Y                                    AY  SK  +   +  +A+E  G
Sbjct: 179 AY------------------------------------AYGPSKAALHQLSRMLAKELVG 202

Query: 247 DNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRK----PEIMADAAYYILSS 295
           ++I VN + P    + +            AD+ +        PE MA  A   L+ 
Sbjct: 203 EHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAIS-LAG 257

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 98.6 bits (246), Expect = 2e-23
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
               G    +TG + GIG A A + A+ GA +V++             +  A   +   G
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQP-------ALEQAVNGLRGQG 79

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
            +    + D+R    +    + A    GG+D++ +NA  +     A      +  +  I+
Sbjct: 80  FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDID 139

Query: 125 ARG 127
             G
Sbjct: 140 LWG 142

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 97.2 bits (243), Expect = 2e-23
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 14/129 (10%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIA----AKTAEPHPKLPGTIYSAAKEVED 62
                  +TG+SRG+GKA A++ A++G NIVI      K A             A+E+E 
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAAL----------ETAEEIEK 51

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
            G   L    ++     ++       + FG +D+ VNNA++  L          +D    
Sbjct: 52  LGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMN 111

Query: 123 INARGTYLV 131
           INA+     
Sbjct: 112 INAKALLFC 120

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 73.7 bits (182), Expect = 5e-15
 Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 17/201 (8%)

Query: 121 NQINARG--TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
            +I   G    +VKA   Q  +I+       + FG +D+ VNNA++  L          +
Sbjct: 47  EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHW 106

Query: 177 DLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC 236
           D    INA+     +Q+    ++K+   HI++IS   ++     +N+    +SK  +   
Sbjct: 107 DWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY--LENYTTVGVSKAALEAL 164

Query: 237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK---------PEIMAD 287
              +A E     I VNA+    AI T A++       D    +R+          + M D
Sbjct: 165 TRYLAVELSPKQIIVNAVSG-GAIDTDALKHF-PNREDLLEDARQNTPAGRMVEIKDMVD 222

Query: 288 AAYYILSSNPPSLTGQFLIDD 308
              +++SS    + GQ +I D
Sbjct: 223 TVEFLVSSKADMIRGQTIIVD 243

>2qzt_A Sterol carrier protein 2-like 2; mosquito, fatty acid, palmitic acid, cholesterol, lipid transport; HET: PLM; 1.70A {Aedes aegypti} PDB: 3bdq_A* Length = 111

 Score = 93.0 bits (231), Expect = 2e-23
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 3/76 (3%)

Query: 324 VPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKL 383
           +   +    W +DLK      G        D T+T+  ++ +A+    L    A   GK+
Sbjct: 39  IKTASGVEQWIVDLKQLKVDQGVFAS---PDVTVTVGLEDMLAISGKTLTVGDALKQGKI 95

Query: 384 KISGNLQKAMKLEKLM 399
           ++SG+   A KL +++
Sbjct: 96  ELSGDADLAAKLAEVI 111

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 97.3 bits (243), Expect = 3e-23
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
                    +TGA+ GIG  IA +  K+G  + + A+  E             KE+ +AG
Sbjct: 18  ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-------LKELREAG 70

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                   D+R    +++ V A V+++G +D+LVNNA
Sbjct: 71  VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNA 107

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 32/196 (16%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
               EI++ V A V+++G +D+LVNNA       TA    + +  + + N  G + V+++
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 140

Query: 194 CLPYLK--KSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----AEEFK 245
            L      +     I+NI+             +   Y+ SK+G+    +G       E  
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVV----HAAPYSASKHGV----VGFTKALGLELA 192

Query: 246 GDNIAVNALWP---RT----AIYTAAIEMLTGGSADAKATSR---------KPEIMADAA 289
              I VNA+ P    T    ++     ++    + +A              +P  +A+  
Sbjct: 193 RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV 252

Query: 290 YYILSSNPPSLTGQFL 305
            Y++     ++T Q L
Sbjct: 253 AYLIGPGAAAVTAQAL 268

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 97.3 bits (243), Expect = 3e-23
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 7/96 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
                   +TGA RGIG+ IA   AK  ++++  ++T +    +         E++  G 
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV-------VDEIKSFGY 93

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                  D+  +  +   +N  + +   +DILVNNA
Sbjct: 94  ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA 129

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 43.3 bits (103), Expect = 8e-05
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 28/154 (18%)

Query: 118 DLMNQINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
            ++++I + G     Y    S+  EI   +N  + +   +DILVNNA  I    T +   
Sbjct: 83  SVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA-GI----TRDNLF 137

Query: 174 KK-----YDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAY 226
            +     ++ + + N    + ++Q     +  + +  I+NIS  + L  N         Y
Sbjct: 138 LRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV----GQANY 193

Query: 227 TISKYGMSMCALGM----AEEFKGDNIAVNALWP 256
           + SK G+    +G     A+E    NI VNA+ P
Sbjct: 194 SSSKAGV----IGFTKSLAKELASRNITVNAIAP 223

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 97.7 bits (244), Expect = 3e-23
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            LS  ++ +TG ++GIG+ IA   A+ GAN+ +AA++      +       A+  E   G
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSV------TAELGELGAG 91

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           N +   +D+ D  +   A    VD FG +D++  NA
Sbjct: 92  NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANA 127

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 44/195 (22%), Positives = 64/195 (32%), Gaps = 40/195 (20%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
            S       A    VD FG +D++  NA  I         L          +  +N +GT
Sbjct: 100 VSDPGSCADAARTVVDAFGALDVVCANA-GI----FPEARLDTMTPEQLSEVLDVNVKGT 154

Query: 188 YLVSQKCLPYLKKSNHAHILNISP---PLNLNPFWFKNHVAYTISKYGMSMCALGM---- 240
               Q CL  L  S    ++  S    P+   P W      Y  SK       LG     
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW----SHYGASKAAQ----LGFMRTA 206

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYY 291
           A E     + VNA+ P   I T   E L     +  +             P  +   A +
Sbjct: 207 AIELAPRGVTVNAILP-GNILT---EGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAF 262

Query: 292 ILSSNPPS-LTGQFL 305
            L+++    +TGQ +
Sbjct: 263 -LATDEAGYITGQAI 276

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 96.4 bits (241), Expect = 4e-23
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 6/96 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G T  +TG+SRG+GKAIA K    GANIV+    A           + A+E + AG 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLD------ATAEEFKAAGI 55

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           N +    D+++   V++ V  A+D FG IDILVNNA
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNA 91

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 42.8 bits (102), Expect = 8e-05
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 24/135 (17%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
                ++++ V  A+D FG IDILVNNA  I    T +T + K     +D +   N +  
Sbjct: 64  VKNPEDVENMVKTAMDAFGRIDILVNNA-GI----TRDTLMLKMSEKDWDDVLNTNLKSA 118

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----A 241
           YL ++     + K     I+NI+    +  N         Y  SK G+    +G     A
Sbjct: 119 YLCTKAVSKIMLKQKSGKIINITSIAGIIGNA----GQANYAASKAGL----IGFTKSIA 170

Query: 242 EEFKGDNIAVNALWP 256
           +EF    I  NA+ P
Sbjct: 171 KEFAAKGIYCNAVAP 185

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 96.4 bits (241), Expect = 4e-23
 Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 10/126 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G    +TGA  GIG  I    A  GA +++  + A                 E    
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAA---------LDRAAQELGAA 58

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                + D+ D  A+ +A  A  +    + ILVN+A    L D   T    +  +  +N 
Sbjct: 59  VAARIVADVTDAEAMTAAA-AEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNV 117

Query: 126 RGTYLV 131
            G +  
Sbjct: 118 DGMFWA 123

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 73.3 bits (181), Expect = 5e-15
 Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 30/230 (13%)

Query: 93  GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA--SQGLEIQSAVNAAVDKF 150
           G  +++ +  A +L   A           ++ A     + A  +    + +A  A  +  
Sbjct: 35  GARLILIDREAAALDRAAQ----------ELGAAVAARIVADVTDAEAMTAAA-AEAEAV 83

Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS 210
             + ILVN+A    L D   T    +  +  +N  G +  S+     +       I+N+ 
Sbjct: 84  APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLG 143

Query: 211 PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTG 270
                     +   +Y  SK  +      +A E+ G  + VNAL P   + T   EM   
Sbjct: 144 SMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAP-GYVAT---EMTLK 199

Query: 271 GSADAKATSR-----------KPEIMADAAYYILSSNPPS-LTGQFLIDD 308
                +               +P  +A AA + L+S   S +TG  L  D
Sbjct: 200 MRERPELFETWLDMTPMGRCGEPSEIAAAALF-LASPAASYVTGAILAVD 248

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 96.4 bits (241), Expect = 4e-23
 Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 16/127 (12%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G+L G  I +T A++GIG+A AL  A++GA ++                    +E+E   
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINES-----------KLQELEKYP 50

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           G     ++D+  +  +        ++   +D+L N A  +      +   K +D    +N
Sbjct: 51  G-IQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLN 105

Query: 125 ARGTYLV 131
            R  YL+
Sbjct: 106 VRSMYLM 112

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 33/184 (17%), Positives = 67/184 (36%), Gaps = 21/184 (11%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           +  ++   ++   +D+L N A  +      +   K +D    +N R  YL+ +  LP + 
Sbjct: 62  KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKML 121

Query: 200 KSNHAHILNIS---PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
                +I+N+S     +        N   Y+ +K  +      +A +F    I  N + P
Sbjct: 122 AQKSGNIINMSSVASSVKGVV----NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177

Query: 257 RTAIYTAAIEMLTGGSADAKATSR------------KPEIMADAAYYILSSNPPSLTGQ- 303
            T + T +++       + +                  E +A    Y+ S     +TG  
Sbjct: 178 GT-VDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNP 236

Query: 304 FLID 307
            +ID
Sbjct: 237 VIID 240

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 96.5 bits (241), Expect = 4e-23
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
             L G ++ +TG ++GIG+ IA   A+ GAN+ +A ++              A   +   
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDAC------VADLDQLGS 59

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G  +    D+ D     +    AV++FGGID++  NA
Sbjct: 60  GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANA 96

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 46/194 (23%), Positives = 71/194 (36%), Gaps = 38/194 (19%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
            S   +  +    AV++FGGID++  NA  +      + PL        + +  +N  GT
Sbjct: 69  VSDRAQCDALAGRAVEEFGGIDVVCANA-GV----FPDAPLATMTPEQLNGIFAVNVNGT 123

Query: 188 YLVSQKCLPYLKKSNHAHILNISP---PLNLNPFWFKNHVAYTISKYGMSMCALGM---- 240
           +   Q CL  L  S    ++  S    P+   P W      Y  +K       LG     
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGW----SHYGATKAAQ----LGFMRTA 175

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYY 291
           A E     I VNA+ P   I T   E L     +  A+            PE +   A +
Sbjct: 176 AIELAPHKITVNAIMPG-NIMT---EGLLENGEEYIASMARSIPAGALGTPEDIGHLAAF 231

Query: 292 ILSSNPPSLTGQFL 305
           + +     +TGQ +
Sbjct: 232 LATKEAGYITGQAI 245

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 96.5 bits (241), Expect = 5e-23
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 17/126 (13%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            + +     +TG S GIG A+     + GA +V  +   +           +   V D  
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEK-----------SDVNVSDH- 57

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                   D+ +E  V+ AV     K+G IDILVNNA     +    TP + +  +  +N
Sbjct: 58  ---FKI--DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVN 112

Query: 125 ARGTYL 130
             G+YL
Sbjct: 113 VNGSYL 118

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 78.7 bits (195), Expect = 1e-16
 Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 20/187 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E++ AV     K+G IDILVNNA     +    TP + +  +  +N  G+YL+++  +P 
Sbjct: 67  EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP- 256
           +    H  I+NI+   +       N  AY  SK+ +      +A ++    I  NA+ P 
Sbjct: 127 MLAIGHGSIINIASVQSYAATK--NAAAYVTSKHALLGLTRSVAIDY-APKIRCNAVCPG 183

Query: 257 --RTAIYTAAIEMLTGGSADAKATSR-------------KPEIMADAAYYILSSNPPSLT 301
              T +   A +M  G   +A                  +PE +A+   ++ S     +T
Sbjct: 184 TIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFIT 243

Query: 302 GQ-FLID 307
           G    +D
Sbjct: 244 GACLTVD 250

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 96.5 bits (241), Expect = 5e-23
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
                   IT  ++G+GK +  K    G ++ +   +          + +  +  +D   
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT------TAMETMKETYKDVEE 57

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                  D+  +  +   V  A+  FG ID L+NNA
Sbjct: 58  RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNA 93

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 52.9 bits (128), Expect = 4e-08
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 26/138 (18%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKY-----DLMNQINARG 186
            ++  ++   V  A+  FG ID L+NNA   +         L  Y     + M Q N   
Sbjct: 66  VTKKEDLHKIVEEAMSHFGKIDFLINNAGPYV----FERKKLVDYEEDEWNEMIQGNLTA 121

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPP----LNLNPFWFKNHVAYTISKYGMSMCALGM-- 240
            + + +  +P ++K N   I+N                    A+  +K G+    + +  
Sbjct: 122 VFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI----YRSAFAAAKVGL----VSLTK 173

Query: 241 --AEEFKGDNIAVNALWP 256
             A E     I  N + P
Sbjct: 174 TVAYEEAEYGITANMVCP 191

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 96.2 bits (240), Expect = 7e-23
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
               T F+TG S GIG A+A   A  G  +   A+ A+        + +A   +  AG +
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN-------VSAAVDGLRAAGHD 74

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                 D+     V +AV AAV++FG I ILVN+A
Sbjct: 75  VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSA 109

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 32/196 (16%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           +   E+ +AV AAV++FG I ILVN+A      +TA+     +  +   N  G + V+++
Sbjct: 83  TSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTRE 142

Query: 194 CLPYLK--KSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----AEEFK 245
            L      ++    I+NI+         +       YT SK+G+    +G       E  
Sbjct: 143 VLRAGGMREAGWGRIVNIASTGGKQGVMY----AAPYTASKHGV----VGFTKSVGFELA 194

Query: 246 GDNIAVNALWP------RTAIYTAAIEMLTGGSAD---AKATSR-------KPEIMADAA 289
              I VNA+ P                   G +      +  ++        PE +A   
Sbjct: 195 KTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLV 254

Query: 290 YYILSSNPPSLTGQFL 305
            Y+++    S+T Q L
Sbjct: 255 GYLVTDAAASITAQAL 270

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 95.6 bits (239), Expect = 7e-23
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           KL G    +TG++RGIG+AIA K A  G+ ++I   + E    +      A +     G 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAV------AEEIANKYGV 57

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                 +++  E ++  A     +   GIDILVNNA
Sbjct: 58  KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNA 93

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 26/136 (19%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNAS------AISLTDTANTPLKKYDLMNQINARG 186
                 I  A     +   GIDILVNNA        + ++         ++ + ++N  G
Sbjct: 66  LLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSL------LDWEEVLKVNLTG 119

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM---- 240
           T+LV+Q  L  + K     I+NIS  +    N       V Y+ +K G+    +G     
Sbjct: 120 TFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV----GQVNYSTTKAGL----IGFTKSL 171

Query: 241 AEEFKGDNIAVNALWP 256
           A+E    N+ VNA+ P
Sbjct: 172 AKELAPRNVLVNAVAP 187

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 95.2 bits (238), Expect = 8e-23
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGASRGIG+AIA+  AK GAN+V+     E              E++  G +
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN------EVVDEIKKLGSD 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            +    D+ +   V + V   VD FG +DILVNNA
Sbjct: 56  AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNA 90

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 24/135 (17%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
            +   ++ + V   VD FG +DILVNNA  +    T +  L +     +D +   N +G 
Sbjct: 63  VANAEDVTNMVKQTVDVFGQVDILVNNA-GV----TKDNLLMRMKEEEWDTVINTNLKGV 117

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----A 241
           +L ++    ++ +  H  I+NI+  + +  NP        Y  +K G+    +G+    A
Sbjct: 118 FLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP----GQANYVAAKAGV----IGLTKTSA 169

Query: 242 EEFKGDNIAVNALWP 256
           +E    NI VNA+ P
Sbjct: 170 KELASRNITVNAIAP 184

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 95.7 bits (239), Expect = 8e-23
 Identities = 50/316 (15%), Positives = 87/316 (27%), Gaps = 87/316 (27%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G   G    + G + G+G A   +  + GA ++                           
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVL--------------------------- 36

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                 +    +       +    ++FG          A+     ++             
Sbjct: 37  ------LTGRNES-----NIARIREEFGP------RVHAL----RSD------------- 62

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                    +   EI     AA    G ID+L  NA    L          YD    +N 
Sbjct: 63  --------IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNT 114

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
           +G +   Q+  P +++     I+  S   +           Y+ SK  +   A  +A E 
Sbjct: 115 KGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHP--GMSVYSASKAALVSFASVLAAEL 170

Query: 245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------------KPEIMADAAYYI 292
               I VN++ P   I T    +     A+                    + +A A  + 
Sbjct: 171 LPRGIRVNSVSP-GFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLF- 228

Query: 293 LSSNPPSLTGQFLIDD 308
           L+      TG  L  D
Sbjct: 229 LAFEATFTTGAKLAVD 244

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 96.1 bits (240), Expect = 8e-23
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L      +TGASRGIG+AIAL+ A+ GA ++  A T      +           + AG  
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGI-------GAAFKQAGLE 78

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
               ++++ D  AV + V + + +FG +++LVNNA
Sbjct: 79  GRGAVLNVNDATAVDALVESTLKEFGALNVLVNNA 113

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 28/154 (18%)

Query: 118 DLMNQINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
            +       G      ++  +    + + V + + +FG +++LVNNA  I    T +   
Sbjct: 67  GIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNA-GI----TQDQLA 121

Query: 174 KK-----YDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAY 226
            +     +D +   N +  + +S+  L  + K+    I+NI+  +    NP      V Y
Sbjct: 122 MRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP----GQVNY 177

Query: 227 TISKYGMSMCALGM----AEEFKGDNIAVNALWP 256
             +K G+     GM    A E     I VN + P
Sbjct: 178 AAAKAGV----AGMTRALAREIGSRGITVNCVAP 207

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 95.8 bits (239), Expect = 9e-23
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           ++G  + ITGA  GIG+  A + AK  + +V+              +   A + +  G  
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH-------GLEETAAKCKGLGAK 81

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
               +VD  +   + S+      + G + ILVNNA  +  +D   T   + +   ++N  
Sbjct: 82  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL 141

Query: 127 GT-YLVKA 133
              +  KA
Sbjct: 142 AHFWTTKA 149

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 67.7 bits (166), Expect = 6e-13
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 8/129 (6%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I S+      + G + ILVNNA  +  +D   T   + +   ++N    +  ++  LP 
Sbjct: 94  DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 153

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG---DNIAVNAL 254
           + K+NH HI+ ++             +AY  SK+        + +E        +    L
Sbjct: 154 MTKNNHGHIVTVASAAGHVS--VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 211

Query: 255 WP---RTAI 260
            P    T  
Sbjct: 212 CPNFVNTGF 220

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 95.7 bits (239), Expect = 1e-22
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 18/126 (14%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
             L    + +TGAS GIG+AIA +   +G+ ++  +                    +   
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH------------------DPGE 45

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                   D+ +   V+++++    ++G I +LVNNA   S     +  + ++  +  +N
Sbjct: 46  AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVN 105

Query: 125 ARGTYL 130
             G Y 
Sbjct: 106 LFGYYY 111

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 76.1 bits (188), Expect = 6e-16
 Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 20/187 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +++++++    ++G I +LVNNA   S     +  + ++  +  +N  G Y  S+  +PY
Sbjct: 60  QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP- 256
           + +S    I+NIS           N  AY  SK+ +      +A ++    +  NA+ P 
Sbjct: 120 MIRSRDPSIVNISSVQASIITK--NASAYVTSKHAVIGLTKSIALDY-APLLRCNAVCPA 176

Query: 257 --RTAIYTAAIEMLTGGSADAKATSR-------------KPEIMADAAYYILSSNPPSLT 301
              T +   A E+  G                       KP+ +A A  ++ S     +T
Sbjct: 177 TIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFIT 236

Query: 302 GQ-FLID 307
           G    +D
Sbjct: 237 GTCLYVD 243

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L+     +TGASRGIG  +A   A  GA +V  A +     K           +++ G 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF-------ENSMKEKGF 54

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                +++I D  ++Q+       +   IDILVNNA
Sbjct: 55  KARGLVLNISDIESIQNFFAEIKAENLAIDILVNNA 90

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 30/155 (19%)

Query: 118 DLMNQINARG----TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS------AISLTD 167
              N +  +G      ++  S    IQ+       +   IDILVNNA        + +++
Sbjct: 44  KFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSE 103

Query: 168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVA 225
                  ++  +   N    + +S++C+  + K     I++I   +    NP        
Sbjct: 104 ------DEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP----GQTN 153

Query: 226 YTISKYGMSMCALGM----AEEFKGDNIAVNALWP 256
           Y  +K G+    +G     A E    NI VN + P
Sbjct: 154 YCAAKAGV----IGFSKSLAYEVASRNITVNVVAP 184

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 95.3 bits (238), Expect = 1e-22
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 13/101 (12%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M     L+G    +TGA+ GIG+AIA      GA + +     +             +  
Sbjct: 22  MFK---LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRED----------KLKEIA 68

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            D G +      ++ D  +++     A  +  GIDILVNNA
Sbjct: 69  ADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNA 109

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNAS------AISLTDTANTPLKKYDLMNQINARG 186
            S    I+     A  +  GIDILVNNA        + + D      + +D +  +N   
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD------QDWDDVLAVNLTA 135

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM---- 240
              ++++ +  + +  +  I+NI+  + +  NP        Y  +K G+    +G     
Sbjct: 136 ASTLTRELIHSMMRRRYGRIINITSIVGVVGNP----GQTNYCAAKAGL----IGFSKAL 187

Query: 241 AEEFKGDNIAVNALWP 256
           A+E    NI VN + P
Sbjct: 188 AQEIASRNITVNCIAP 203

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 95.3 bits (238), Expect = 1e-22
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L+     +TGASRGIG+AIAL+ A  GA + +   ++       G        +  AGG
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA------GAADEVVAAIAAAGG 78

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                  D+  E  V++   A ++++G +D+LVNNA
Sbjct: 79  EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNA 114

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
            SQ  E+++   A ++++G +D+LVNNA  I    T +T L +     +  +  +N  G 
Sbjct: 87  VSQESEVEALFAAVIERWGRLDVLVNNA-GI----TRDTLLLRMKRDDWQSVLDLNLGGV 141

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----A 241
           +L S+     + K     I+NI+  +    NP        Y+ +K G+    +G+    A
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNP----GQANYSAAKAGV----IGLTKTVA 193

Query: 242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILS 294
           +E     I VNA+ P   I T   +M T   A  K           +   +A    + L+
Sbjct: 194 KELASRGITVNAVAP-GFIAT---DM-TSELAAEKLLEVIPLGRYGEAAEVAGVVRF-LA 247

Query: 295 SNPPS--LTGQFL 305
           ++P +  +TGQ +
Sbjct: 248 ADPAAAYITGQVI 260

>1ikt_A Estradiol 17 beta-dehydrogenase 4; ALFA-beta fold, protein-triton X-100 complex, hydrophobic tunnel; HET: OXN; 1.75A {Homo sapiens} SCOP: d.106.1.1 Length = 120

 Score = 91.2 bits (226), Expect = 1e-22
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 320 QYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFM 379
           ++     G     W IDLK+GSG   +G      D T+ +++++F+ +  GKL P  AF 
Sbjct: 35  EWHITKGGNIGAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFMEVVLGKLDPQKAFF 94

Query: 380 TGKLKISGNLQKAMKLEKLMGALKSKL 406
           +G+LK  GN+  + KL+ ++    +KL
Sbjct: 95  SGRLKARGNIMLSQKLQMILKDY-AKL 120

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 94.6 bits (236), Expect = 2e-22
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 14/131 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
                   + ITGAS GIG+AIA + +++G  +++ A+  E   +L        K +   
Sbjct: 11  GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE---RL--------KAL--N 57

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
             N L   VD+ D++   +A+  A   +G  D +VNNA  + L         ++  M  +
Sbjct: 58  LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDV 117

Query: 124 NARGT-YLVKA 133
           N  G    ++A
Sbjct: 118 NVLGLLNGMQA 128

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 21/170 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
              +A+  A   +G  D +VNNA  + L         ++  M  +N  G     Q  L  
Sbjct: 73  TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP 132

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           +K  N   I+NIS         F +H AY  +K+ +   +  + EE    N+ V      
Sbjct: 133 MKARNCGTIINISSIAGKKT--FPDHAAYCGTKFAVHAISENVREEVAASNVRV------ 184

Query: 258 TAIYTAAIE-----MLTGGSADAKATSRK--------PEIMADAAYYILS 294
             I  +A++       T         + +         + +A A  +   
Sbjct: 185 MTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQ 234

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 94.1 bits (235), Expect = 2e-22
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
               +  +TGASRGIG++IAL+ A++G N+ +    ++   +      +  +E++  G +
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE------AVVEEIKAKGVD 55

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                 ++ D   V++ +   V +FG +D+LVNNA
Sbjct: 56  SFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA 90

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 24/135 (17%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
            +   E+++ +   V +FG +D+LVNNA  I    T +  L +     +D +   N +G 
Sbjct: 63  VADADEVKAMIKEVVSQFGSLDVLVNNA-GI----TRDNLLMRMKEQEWDDVIDTNLKGV 117

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----A 241
           +   QK  P + +     I+N+S  +    NP        Y  +K G+    +G+    A
Sbjct: 118 FNCIQKATPQMLRQRSGAIINLSSVVGAVGNP----GQANYVATKAGV----IGLTKSAA 169

Query: 242 EEFKGDNIAVNALWP 256
            E     I VNA+ P
Sbjct: 170 RELASRGITVNAVAP 184

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 94.9 bits (237), Expect = 2e-22
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 10/130 (7%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           +T +L      ITG + GIG+  A    + GA +VIA    +   K+          +  
Sbjct: 10  STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV-------CNNIG- 61

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLM 120
           +         D+  +  V++ V+  + K G +DI+  N    + +         + +  +
Sbjct: 62  SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRV 121

Query: 121 NQINARGTYL 130
             IN  G +L
Sbjct: 122 MDINVYGAFL 131

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 94.6 bits (236), Expect = 3e-22
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G     T+FITGA+ G G+A A + A+ G ++V+  +  E    L       A E+  A 
Sbjct: 17  GSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQAL-------AGELS-AK 68

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQI 123
              LP  +D+RD  A+ +AV+   ++F  +  L+NNA  A+      +  L  +D M   
Sbjct: 69  TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128

Query: 124 NARGT-YLVKA 133
           N +G  Y  + 
Sbjct: 129 NIKGLLYSTRL 139

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 58.4 bits (142), Expect = 7e-10
 Identities = 33/170 (19%), Positives = 65/170 (38%), Gaps = 21/170 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
            + +AV+   ++F  +  L+NNA  A+      +  L  +D M   N +G    ++  LP
Sbjct: 83  AMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLP 142

Query: 197 YLKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
            L      A I+N+       P  +     Y  +K  +   +L +  + +G  + V    
Sbjct: 143 RLIAHGAGASIVNLGSVAGKWP--YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRV---- 196

Query: 256 PRTAIYTAAIE-----MLTGGSADAKATSRK------PEIMADAAYYILS 294
             T +     E     +  GG       +        PE +A+  ++I++
Sbjct: 197 --TNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMN 244

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 94.1 bits (235), Expect = 3e-22
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L   T+ +TG ++GIG AI  + A  GA I   A+           +     + +  G  
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE-------LNECLSKWQKKGFQ 64

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINA 125
               + D       +  +      FGG +DIL+NN  AI    T +   + +      N 
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 124

Query: 126 RGTYLV 131
              Y +
Sbjct: 125 ESAYHL 130

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 72.1 bits (178), Expect = 2e-14
 Identities = 47/184 (25%), Positives = 70/184 (38%), Gaps = 27/184 (14%)

Query: 138 EIQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E +  +      FGG +DIL+NN  AI    T +   + +      N    Y +SQ   P
Sbjct: 77  EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP 136

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            LK S   +I+ +S    +          Y+ +K  ++  A  +A E+  D I  NA+ P
Sbjct: 137 LLKASGCGNIIFMSSIAGV--VSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAP 194

Query: 257 RTAIYTAAIEMLTGGSADAKATSRKP--------EIMA-------DAAYYILSSNPPSLT 301
              I T   E +          SRKP        E+ +        AA YI        T
Sbjct: 195 -AVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI--------T 245

Query: 302 GQFL 305
           GQ +
Sbjct: 246 GQTI 249

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 93.8 bits (234), Expect = 4e-22
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 13/127 (10%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
              ++G    +TGA++GIG+A A      GA + +     E   +       AA   +  
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQC-----KAALHEQFE 56

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
               L    D+ D+  ++      VD FG +DILVNNA  +          K ++   QI
Sbjct: 57  PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNA-GV-------NNEKNWEKTLQI 108

Query: 124 NARGTYL 130
           N      
Sbjct: 109 NLVSVIS 115

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 93.4 bits (233), Expect = 5e-22
 Identities = 50/307 (16%), Positives = 91/307 (29%), Gaps = 81/307 (26%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            I ITG++ GIG A+    A+ G  ++   +                 ++   GG     
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQAD----------IEADLSTPGG----- 47

Query: 71  IVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
                     ++AV A +D+ GG +D LV  A                            
Sbjct: 48  ---------RETAVAAVLDRCGGVLDGLVCCA---------------------------- 70

Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK--YDLMNQINARGT 187
                                 G+ + VN     +L D     L +        + +   
Sbjct: 71  -------------GVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD 247
                  LP ++                       H+AY  SKY ++  A     ++ G 
Sbjct: 118 TQPGAAELPMVEAMLAGDEARAIELAEQQGQ---THLAYAGSKYAVTCLARRNVVDWAGR 174

Query: 248 NIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILSSNPP 298
            + +N + P  A+ T  ++         ++T R         +P  +A+A  ++L     
Sbjct: 175 GVRLNVVAP-GAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQAS 233

Query: 299 SLTGQFL 305
            + G  L
Sbjct: 234 FIHGSVL 240

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 93.4 bits (233), Expect = 5e-22
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
             +  +     + ITGAS+GIG  +          +V  +++ +                
Sbjct: 20  FQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK---------------- 63

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
             A  +      DI         V   +++FG ID LVNNA             + YD  
Sbjct: 64  PSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHN 123

Query: 121 NQINARGTYLV 131
             +N  G + +
Sbjct: 124 LGVNVAGFFHI 134

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 67.6 bits (166), Expect = 6e-13
 Identities = 30/119 (25%), Positives = 51/119 (42%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
                V   +++FG ID LVNNA             + YD    +N  G + ++Q+    
Sbjct: 82  TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAE 141

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + K    HI++I+  L   P         +++K G++     +A EF    + VNA+ P
Sbjct: 142 MLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSP 200

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 94.4 bits (235), Expect = 6e-22
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 8/102 (7%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA-EPHPKLPGTIYSAAKE 59
           M+ + K     I ITGAS G G+  A   A  G   V A  +  +   +    + + A  
Sbjct: 1   MVMSKK----IILITGASSGFGRLTAEALAGAGHR-VYA--SMRDIVGRNASNVEAIAGF 53

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             D   +     +D++ + +V  A++  + + G ID+L++NA
Sbjct: 54  ARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNA 95

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 58.6 bits (142), Expect = 9e-10
 Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           +  A++  + + G ID+L++NA  +          +++  +  IN   T  V++  LP++
Sbjct: 74  VDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHM 133

Query: 199 KKSNHAHILNISP---PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
           ++  H  ++ IS         P+       Y  +K  M   A+  A E     I  + + 
Sbjct: 134 RRQKHGLLIWISSSSSAGGTPPYL----APYFAAKAAMDAIAVQYARELSRWGIETSIIV 189

Query: 256 P---RTAIYTAAIEMLTGGSADAKATSRKP 282
           P    +     A   +    A        P
Sbjct: 190 PGAFTSGTNHFAHSGVPDDHARQAEYEAGP 219

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 93.5 bits (233), Expect = 6e-22
 Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 18/166 (10%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M+   +  G +  ++G + G+G+A   +   DG  +VIA   AE                
Sbjct: 22  MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAE----------KGKALA 71

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-----SAISLTDTANTPLK 115
           ++ G        ++  E +V +A+ AA         +V +        I   D +   + 
Sbjct: 72  DELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMG 131

Query: 116 KYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
            +     +   GTY V     L   S   A   + G    LV  AS
Sbjct: 132 GFTKTIDLYLNGTYNVAR---LVAASIAAAEPRENGERGALVLTAS 174

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 93.0 bits (232), Expect = 7e-22
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L    + ITGA+ GIG+A     AK+GA +V       P            +  E  G 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP----------LREAAEAVGA 51

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           + +    D+ D  +V+     A+   G +D +V+ A
Sbjct: 52  HPVVM--DVADPASVERGFAEALAHLGRLDGVVHYA 85

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 49.0 bits (118), Expect = 7e-07
 Identities = 32/161 (19%), Positives = 63/161 (39%), Gaps = 26/161 (16%)

Query: 106 LTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL 165
             D    PL++      + A    ++  +    ++     A+   G +D +V+ A  I  
Sbjct: 34  ACDIEEGPLRE--AAEAVGAHP-VVMDVADPASVERGFAEALAHLGRLDGVVHYA-GI-- 87

Query: 166 TDTANTPLKK-----YDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFW 219
             T +    K     ++L+ ++N  G++LV++     +++ N   I+  +  + L N   
Sbjct: 88  --TRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-- 143

Query: 220 FKNHVAYTISKYGMSMCALGM----AEEFKGDNIAVNALWP 256
                 Y  S  G+    +G+    A E     I VN L P
Sbjct: 144 --GQANYAASMAGV----VGLTRTLALELGRWGIRVNTLAP 178

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 93.4 bits (233), Expect = 7e-22
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 9/129 (6%)

Query: 6   KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
            L G  + +TGAS  +G+G   A   A+ GA + I   +     +         KE+E  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAE------ENVKELEKT 70

Query: 64  GG-NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
            G         +    + +  V   V  FG ID  + NA A + +   +  ++ ++ + Q
Sbjct: 71  YGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130

Query: 123 INARGTYLV 131
           ++  GT+  
Sbjct: 131 VDLNGTFHC 139

>1c44_A Protein (sterol carrier protein 2); non specific lipid transfer protein, fatty acid binding, fatty acyl COA binding, lipid binding protein; 1.80A {Oryctolagus cuniculus} SCOP: d.106.1.1 PDB: 1qnd_A 2c0l_B Length = 123

 Score = 89.3 bits (221), Expect = 7e-22
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 325 PNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLK 384
             G  E +W +D+K G GS          D T+TM + + +AL  GK+ P SAF  GKLK
Sbjct: 42  GPGGKEATWVVDVKNGKGSVLPNSDKKA-DCTITMADSDLLALMTGKMNPQSAFFQGKLK 100

Query: 385 ISGNLQKAMKLEKLMG-ALKSKL 406
           I+GN+  AMKL+ L     K+KL
Sbjct: 101 ITGNMGLAMKLQNLQLQPGKAKL 123

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 93.5 bits (233), Expect = 8e-22
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 9/125 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG- 64
           +       +TGAS GIG A+A    + G  +V  A+T          I   A E + AG 
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVG-------NIEELAAECKSAGY 81

Query: 65  -GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
            G  +P   D+ +E  + S  +A   +  G+DI +NNA         +     +  M  +
Sbjct: 82  PGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNV 141

Query: 124 NARGT 128
           N    
Sbjct: 142 NVLAL 146

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 62.7 bits (153), Expect = 3e-11
 Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 21/172 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I S  +A   +  G+DI +NNA         +     +  M  +N     + +++    
Sbjct: 97  DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 156

Query: 198 LKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF--KGDNIAVNA 253
           +K+ N    HI+NI+               Y+ +KY ++    G+ +E      +I    
Sbjct: 157 MKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRA-- 214

Query: 254 LWPRTAIYTAAIE-----MLTGGSADAKATSR------KPEIMADAAYYILS 294
               T I    +E      L     +  A +       KPE +A+A  Y+LS
Sbjct: 215 ----TCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLS 262

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 92.6 bits (231), Expect = 1e-21
 Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 18/131 (13%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
             +     G    +TGA+ GIG A+       GA + +A +                   
Sbjct: 20  FQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA---------------- 63

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
                  L    D+R+         A     G +DI+VNNA  IS      T    + L 
Sbjct: 64  --GIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS 121

Query: 121 NQINARGTYLV 131
             +N    + +
Sbjct: 122 LGVNVEAPFRI 132

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 81.8 bits (203), Expect = 8e-18
 Identities = 36/184 (19%), Positives = 63/184 (34%), Gaps = 14/184 (7%)

Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
            +         A     G +DI+VNNA  IS      T    + L   +N    + + + 
Sbjct: 76  REAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRA 135

Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
            +P +  +    I+N++    L P     H  Y ++K  ++     M  +     I +NA
Sbjct: 136 AIPLMAAAGGGAIVNVASCWGLRPGP--GHALYCLTKAALASLTQCMGMDHAPQGIRINA 193

Query: 254 LWP---RTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILSSNPPSLT 301
           + P    T +              A A            +PE +AD   ++ S     L 
Sbjct: 194 VCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLC 253

Query: 302 GQFL 305
           G  +
Sbjct: 254 GSLV 257

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + +TGASRGIGKAIAL   K G  +++    +    +        +K++E  GG  +  
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE------EVSKQIEAYGGQAITF 56

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             D+  E  V++ +  A+D +G ID++VNNA
Sbjct: 57  GGDVSKEADVEAMMKTAIDAWGTIDVVVNNA 87

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 24/135 (17%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 187
            S+  ++++ +  A+D +G ID++VNNA  I    T +T L +     +D +  +N  G 
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNA-GI----TRDTLLIRMKKSQWDEVIDLNLTGV 114

Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----A 241
           +L +Q     + K     I+NI+  + L  N         Y  +K G+    +G     A
Sbjct: 115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNI----GQANYAAAKAGV----IGFSKTAA 166

Query: 242 EEFKGDNIAVNALWP 256
            E    NI VN + P
Sbjct: 167 REGASRNINVNVVCP 181

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 92.2 bits (230), Expect = 1e-21
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 5   GKLSGLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           G L G  + +T A+  GIG   A +A  +GA++VI+        +         +  +  
Sbjct: 18  GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGET------RDQLADLG 71

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            G     + D+    AV + +   V+K G +D+LVNNA
Sbjct: 72  LGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNA 109

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 60.6 bits (148), Expect = 1e-10
 Identities = 34/183 (18%), Positives = 72/183 (39%), Gaps = 25/183 (13%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            + + +   V+K G +D+LVNNA     T   +   +++D +  +        ++  L Y
Sbjct: 87  AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRY 146

Query: 198 LKKSNHA-HILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----AEEFKGDNIA 250
            +  +H   I+N +  L          +   Y  +K G+    + +    A E     + 
Sbjct: 147 FRGVDHGGVIVNNASVLGWRAQH----SQSHYAAAKAGV----MALTRCSAIEAVEFGVR 198

Query: 251 VNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPS-LTG 302
           +NA+ P +      +E  +      +  S        +P  +A    + L+S+  S +TG
Sbjct: 199 INAVSP-SIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAF-LASDYSSYMTG 256

Query: 303 QFL 305
           + +
Sbjct: 257 EVV 259

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 92.2 bits (230), Expect = 1e-21
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
             +L      +TGA  GIG+A++++ A +GA +           +    +     +    
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGI-DILVNNA 101
            GN      D+ +  A +  +      F     ++V+ A
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA 100

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 93.2 bits (232), Expect = 2e-21
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--AG 64
            +G T F+TG + G+G  +  +    G  + IA    +       +I  A   +E   +G
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQD-------SIDKALATLEAEGSG 58

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
              +   +D+      + A +    +FG + IL NNA          +    +D +  +N
Sbjct: 59  PEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVN 118

Query: 125 ARG 127
             G
Sbjct: 119 LHG 121

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 91.6 bits (228), Expect = 3e-21
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 16/132 (12%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            + GL   ITG + G+G A A +    GA+ V+                    + +  G 
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS----------GGEAQAKKLGN 58

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA------SAISLTDTANTPLKKYDL 119
           NC+    D+  E  VQ+A+  A  KFG +D+ VN A         +L       L+ +  
Sbjct: 59  NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQR 118

Query: 120 MNQINARGTYLV 131
           +  +N  GT+ V
Sbjct: 119 VLDVNLMGTFNV 130

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 91.1 bits (227), Expect = 3e-21
 Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 12/126 (9%)

Query: 10  LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
           + + +TGA+ G G+ I  +  + G  ++   +  E   +L        +  ++ G N   
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQE---RL-------QELKDELGDNLYI 50

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQINARGT 128
             +D+R+  A++  + +   ++  IDILVNNA  A+ +       ++ ++ M   N +G 
Sbjct: 51  AQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGL 110

Query: 129 -YLVKA 133
            Y+ +A
Sbjct: 111 VYMTRA 116

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
            I+  + +   ++  IDILVNNA  A+ +       ++ ++ M   N +G   +++  LP
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
            + + NH HI+NI       P  +     Y  +K  +   +L +  +  G  + V
Sbjct: 120 GMVERNHGHIINIGSTAGSWP--YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRV 172

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 90.7 bits (226), Expect = 4e-21
 Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 18/124 (14%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            +     +TG S+GIGKA+     ++  + VI     +                  +  N
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ----------------SFSAEN 45

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                 D+  +  + + ++    K    D +  NA  +      +  ++    +  +N  
Sbjct: 46  LKFIKADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVW 103

Query: 127 GTYL 130
            +  
Sbjct: 104 SSIY 107

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 74.1 bits (183), Expect = 3e-15
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 25/188 (13%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           +I + ++    K    D +  NA  +      +  ++    +  +N   +    +     
Sbjct: 58  DITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENN 115

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP- 256
           LK    A I+              N  AYT+SK  ++     +A +     I VN + P 
Sbjct: 116 LKVG--ASIVFNGSDQCFIAKP--NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPG 171

Query: 257 --RTAIYTAAIEMLTGGSADAKATSR-------------KPEIMADAAYYILSSNPPS-L 300
              T +Y   I+        +   ++             +P+ +A+   + L S+    +
Sbjct: 172 TVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIF-LLSDKSKFM 230

Query: 301 TGQ-FLID 307
           TG    ID
Sbjct: 231 TGGLIPID 238

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 90.5 bits (225), Expect = 6e-21
 Identities = 55/321 (17%), Positives = 100/321 (31%), Gaps = 87/321 (27%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAK---DGANIVIAAKTAEPHPKLPGTIYSAAKEVE 61
             L      +TGASRG G+A+A + A+    G+ ++++A++     +L   + +     +
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGA-----Q 56

Query: 62  DAGGNCLPCIVDIRDEHAVQSAVNAAVDKFG----GIDILVNNASAISLTDTANTPLKKY 117
                 +    D+  E  VQ  ++A  +          +L+NNA+  +L D +   L   
Sbjct: 57  QPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAA--TLGDVSKGFLNVN 114

Query: 118 DLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 177
           DL                     + VN            +N  S + LT           
Sbjct: 115 DL---------------------AEVNNYWA--------LNLTSMLCLT----------- 134

Query: 178 LMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSM 235
                            L   + S      ++NIS    L P  +K    Y   K    M
Sbjct: 135 --------------SGTLNAFQDSPGLSKTVVNISSLCALQP--YKGWGLYCAGKAARDM 178

Query: 236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----------KPEI 284
               +A E    ++ V +  P   +     ++    S D +  S+               
Sbjct: 179 LYQVLAAE--EPSVRVLSYAP-GPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGT 235

Query: 285 MADAAYYILSSNPPSLTGQFL 305
            A     +L       +G  +
Sbjct: 236 SAQKLLGLLQK-DTFQSGAHV 255

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 90.0 bits (224), Expect = 7e-21
 Identities = 16/132 (12%), Positives = 33/132 (25%), Gaps = 20/132 (15%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           ++  G      I + G S  +G  +         N +                       
Sbjct: 14  LVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISID-------------------F 54

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDL 119
            +         +    E  ++S +     K   +D  V  A        +++  LK    
Sbjct: 55  RENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKG 114

Query: 120 MNQINARGTYLV 131
           M  +N    +  
Sbjct: 115 MIDMNLYSAFAS 126

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 85.0 bits (211), Expect = 4e-19
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 12/182 (6%)

Query: 118 DLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKY 176
           D     NA  ++ +K S   EI+S +     K   +D  V  A        +++  LK  
Sbjct: 53  DFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSV 112

Query: 177 DLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC 236
             M  +N    +  +      L +      +       LN       +AY  +K      
Sbjct: 113 KGMIDMNLYSAFASAHIGAKLLNQG--GLFVLTGASAALNRTS--GMIAYGATKAATHHI 168

Query: 237 ALGMAEEFKG--DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-KPEIMADAAYYIL 293
              +A E  G         + P   + T          +DA          +A+  +   
Sbjct: 169 IKDLASENGGLPAGSTSLGILP-VTLDT---PTNRKYMSDANFDDWTPLSEVAEKLFEWS 224

Query: 294 SS 295
           ++
Sbjct: 225 TN 226

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 89.9 bits (224), Expect = 8e-21
 Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 13/88 (14%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +T      G   AL+ ++ G  +    ++ +              E+E            
Sbjct: 6   VTNVKHFGGMGSALRLSEAGHTVACHDESFK-----------QKDELEAFAETYPQL--K 52

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              E      + A    +G +D+LV+N 
Sbjct: 53  PMSEQEPAELIEAVTSAYGQVDVLVSND 80

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 61.8 bits (151), Expect = 5e-11
 Identities = 33/196 (16%), Positives = 64/196 (32%), Gaps = 26/196 (13%)

Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQIN 183
             +K     E    + A    +G +D+LV+N            P+ K     Y    +  
Sbjct: 49  PQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAP----EFQPIDKYAVEDYRGAVEAL 104

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
               + +       +KK    HI+ I+      P  +K    YT ++ G    A  +++E
Sbjct: 105 QIRPFALVNAVASQMKKRKSGHIIFITSATPFGP--WKELSTYTSARAGACTLANALSKE 162

Query: 244 FKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADAA 289
               NI V A+ P    +   +           + +  +              + + +  
Sbjct: 163 LGEYNIPVFAIGPNYLHSED-SPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELV 221

Query: 290 YYILSSNPPSLTGQFL 305
            ++ S +   LTGQ  
Sbjct: 222 AFLASGSCDYLTGQVF 237

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 90.0 bits (224), Expect = 9e-21
 Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 14/130 (10%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L      +TGAS G+G A+    A++GA ++                 +  +   + G 
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP----------AGEEPAAELGA 53

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA----SAISLTDTANTPLKKYDLMN 121
                  D+ +E    +A+  A  +FG +  LVN A        L  +    L  +    
Sbjct: 54  AVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTV 113

Query: 122 QINARGTYLV 131
            +N  GT+ +
Sbjct: 114 AVNLIGTFNM 123

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 45.7 bits (109), Expect = 9e-06
 Identities = 36/188 (19%), Positives = 61/188 (32%), Gaps = 32/188 (17%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA----SAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           +  +A+  A  +FG +  LVN A        L  +    L  +     +N  GT+ + + 
Sbjct: 67  DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRL 126

Query: 194 CLPYLKKSNHAH------ILNISPPLNLNPFWFKN--HVAYTISKYGMSMCALGMAEEFK 245
               + +           I+N +     +          AY  SK G++   L  A E  
Sbjct: 127 AAEVMSQGEPDADGERGVIVNTASIAAFDG----QIGQAAYAASKGGVAALTLPAARELA 182

Query: 246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKAT--------SR--KPEIMADAAYYILSS 295
              I V  + P     T    M+ G   D +           R  + E  A    +I  +
Sbjct: 183 RFGIRVVTIAP-GIFDT---PMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN 238

Query: 296 NPPSLTGQ 303
               L G+
Sbjct: 239 --TMLNGE 244

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 90.4 bits (225), Expect = 9e-21
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 14/101 (13%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M  + K       +TGAS G G+AIA  A   G  ++  A+  E          +    V
Sbjct: 1   MSESAK----VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTE----------ALDDLV 46

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                      +D+ D   +       + ++G +D+LVNNA
Sbjct: 47  AAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNA 87

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 89.9 bits (224), Expect = 9e-21
 Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 75/305 (24%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G T  +TG++ GIGKAIA     +GAN++I                           
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLING------------------------- 41

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                    R E  V   +     ++    +    A    L                   
Sbjct: 42  ---------RREENVNETIKEIRAQYPDAILQPVVAD---LGTEQ--------------- 74

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
                                ++K+  +DIL+NN       +  + P + +  + ++N  
Sbjct: 75  ----------------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIM 118

Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
               +++  L  + +     ++ I+    + P        Y+ +K      +  +AE   
Sbjct: 119 SGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM--AHYSATKTMQLSLSRSLAELTT 176

Query: 246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
           G N+ VN + P  +  T  +E +       +  +   E       ++  + P S+  + +
Sbjct: 177 GTNVTVNTIMP-GSTLTEGVETMLNSLYPNEQLTI-EEAEKR---FMKENRPTSIIQRLI 231

Query: 306 IDDEV 310
             +E+
Sbjct: 232 RPEEI 236

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 89.5 bits (223), Expect = 1e-20
 Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 20/123 (16%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +T A    G A      +DG  +V    +                E E+ G         
Sbjct: 6   VTHARHFAGPAAVEALTQDGYTVVCHDASFA------DAAERQRFESENPGT-------I 52

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGT 128
              E   +  V+A +     ID +V+N   I        PL+         M +  +   
Sbjct: 53  ALAEQKPERLVDATLQHGEAIDTIVSND-YIP-RPMNRLPLEGTSEADIRQMFEALSIFP 110

Query: 129 YLV 131
            L+
Sbjct: 111 ILL 113

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 75.6 bits (187), Expect = 7e-16
 Identities = 32/200 (16%), Positives = 64/200 (32%), Gaps = 24/200 (12%)

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----Y 176
           +    G     A    + +  V+A +     ID +V+N   I        PL+       
Sbjct: 45  ESENPG---TIALAEQKPERLVDATLQHGEAIDTIVSND-YIP-RPMNRLPLEGTSEADI 99

Query: 177 DLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC 236
             M +  +    L+ Q  +  L+ +  A ++ I+  +   P     +  Y  ++      
Sbjct: 100 RQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP--LAYNPLYGPARAATVAL 157

Query: 237 ALGMAEEFKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSR-------KPEIMA 286
               A+    D I + A+ P       Y    +         +           +P+ M 
Sbjct: 158 VESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMG 217

Query: 287 DAAYYILSSNPPS-LTGQFL 305
               + L+S   + + GQF 
Sbjct: 218 ALITF-LASRRAAPIVGQFF 236

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 89.5 bits (223), Expect = 1e-20
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 17/126 (13%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
             SG  +++TGA +GIG A AL   + GA +    +                        
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----------------QEQY 46

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                ++D+ D   V       + +   +D LVN A  + +  T     + +     +N 
Sbjct: 47  PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNV 106

Query: 126 RGTYLV 131
            G + +
Sbjct: 107 GGAFNL 112

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 60.6 bits (148), Expect = 1e-10
 Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 6/151 (3%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           ++       + +   +D LVN A  + +  T     + +     +N  G + + Q+ +  
Sbjct: 60  QVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQ 119

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
            ++     I+ ++      P       AY  SK  +   AL +  E  G  +  N + P 
Sbjct: 120 FRRQRGGAIVTVASDAAHTPRI--GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSP- 176

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADA 288
            +  T   +M         A  ++     + 
Sbjct: 177 GSTDT---DMQRTLWVSDDAEEQRIRGFGEQ 204

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 89.5 bits (223), Expect = 2e-20
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            +    F+TG   G+G AI+ +    G  + ++      H        +      DAG +
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVS------TWLMHERDAGRD 76

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                VD+ D  + +      +  FG +D+L+NNA
Sbjct: 77  FKAYAVDVADFESCERCAEKVLADFGKVDVLINNA 111

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 10/78 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGTYLVSQ 192
             +      +  FG +D+L+NNA  I    T +    K     +D + + +    + V++
Sbjct: 89  SCERCAEKVLADFGKVDVLINNA-GI----TRDATFMKMTKGDWDAVMRTDLDAMFNVTK 143

Query: 193 KCLPYLKKSNHAHILNIS 210
           + +  + +     I+NI 
Sbjct: 144 QFIAGMVERRFGRIVNIG 161

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 89.1 bits (222), Expect = 2e-20
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           +S    ++TG   GIG +I  +  KDG  +V       P            ++ +  G +
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV------KWLEDQKALGFD 64

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                 ++ D  + + A +    + G ID+LVNNA
Sbjct: 65  FYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNA 99

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGTYLVSQ 192
             + A +    + G ID+LVNNA  I    T +   +K     +  +   N    + V++
Sbjct: 77  STKQAFDKVKAEVGEIDVLVNNA-GI----TRDVVFRKMTREDWQAVIDTNLTSLFNVTK 131

Query: 193 KCLPYLKKSNHAHILNIS 210
           + +  + +     I+NIS
Sbjct: 132 QVIDGMVERGWGRIINIS 149

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 88.7 bits (221), Expect = 2e-20
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              ITGASRGIG+AIAL+ A+DG  + I         +        A+E    G   +  
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAE------EVAEEARRRGSPLVAV 56

Query: 71  I-VDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           +  ++ +  A  + V+ A +  GG+D LVNNA
Sbjct: 57  LGANLLEAEAATALVHQAAEVLGGLDTLVNNA 88

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 43.2 bits (103), Expect = 6e-05
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 24/145 (16%)

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YD 177
                       +     + V+ A +  GG+D LVNNA  I    T +T L +     ++
Sbjct: 51  SPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNA-GI----TRDTLLVRMKDEDWE 105

Query: 178 LMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSM 235
            + + N    +  +++ +  + K+    I+NI+  + +  NP        Y  SK G+  
Sbjct: 106 AVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP----GQANYVASKAGL-- 159

Query: 236 CALGM----AEEFKGDNIAVNALWP 256
             +G     A+E+    I VNA+ P
Sbjct: 160 --IGFTRAVAKEYAQRGITVNAVAP 182

>3cnu_A Predicted coding region AF_1534; structural GE MCSG, PSI-2, protein structure initiative, midwest center F structural genomics; 1.90A {Archaeoglobus fulgidus dsm 4304} PDB: 3bn8_A* Length = 116

 Score = 85.0 bits (210), Expect = 2e-20
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 330 EGSWHIDLKT-GSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGN 388
              ++++ K+ G+     G  SS    T+      ++A+ +G+  P S FM GK +I GN
Sbjct: 38  GEEFYVEYKSDGTCEFKEGVHSSP-TFTVVAPPDFWLAVLKGQEDPVSGFMMGKYRIEGN 96

Query: 389 LQKAMKLEKLMGALKSKL 406
           + +A +L  ++   + K 
Sbjct: 97  IMEAQRLAGVIKKFQGKF 114

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 88.5 bits (220), Expect = 5e-20
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 14/135 (10%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDG---ANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           +L+  T+ ITGAS GIGKA AL+  +       +++AA+  E   +L        K ++ 
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEEL-------KKTIDQ 82

Query: 63  A--GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDL 119
                      +DI     ++  +     +F  IDILVNNA  A+          +    
Sbjct: 83  EFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQD 142

Query: 120 MNQINARGT-YLVKA 133
           +   N      + +A
Sbjct: 143 VFDTNVTALINITQA 157

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 20/169 (11%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           +I+  +     +F  IDILVNNA  A+          +    +   N      ++Q  LP
Sbjct: 101 KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLP 160

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
             +  N   I+N+      +   +     Y  SK+ +      + +E     I V     
Sbjct: 161 IFQAKNSGDIVNLGSIAGRDA--YPTGSIYCASKFAVGAFTDSLRKELINTKIRV----- 213

Query: 257 RTAIYTAAIE------MLTGGSADAKATSR-----KPEIMADAAYYILS 294
              I    +E         G    AK   +       + +AD   Y  S
Sbjct: 214 -ILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATS 261

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 89.0 bits (221), Expect = 6e-20
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSA---AKEVE 61
           G + G  + +TGA  GIG+A AL  A +GA +V+                +A     E+ 
Sbjct: 23  GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT 82

Query: 62  DAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDT--ANTPLKKYDL 119
            AGG  +    ++ D       +  AV+ FGG+D+LVNNA  I + D   ANT  +++D 
Sbjct: 83  AAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNA-GI-VRDRMIANTSEEEFDA 140

Query: 120 MNQINARGTYLV 131
           +  ++ +G +  
Sbjct: 141 VIAVHLKGHFAT 152

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 87.3 bits (217), Expect = 7e-20
 Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 7/97 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
            L+   +    A  GIG   + +  K      +     E    L      A  +  +   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL------AELKAINPKV 55

Query: 66  NCLPCIVDIRDEHA-VQSAVNAAVDKFGGIDILVNNA 101
           N      D+    A  +  +    D+   +DIL+N A
Sbjct: 56  NITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 29/181 (16%), Positives = 49/181 (27%), Gaps = 23/181 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E +  +    D+   +DIL+N A  +             +    IN  G    +   L +
Sbjct: 70  ESKKLLKKIFDQLKTVDILINGAGILDDHQ--------IERTIAINFTGLVNTTTAILDF 121

Query: 198 LKKSNHAH---ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
             K        I NI      N         Y+ SK  +      +A+      +   ++
Sbjct: 122 WDKRKGGPGGIIANICSVTGFNAIHQV--PVYSASKAAVVSFTNSLAKLAPITGVTAYSI 179

Query: 255 WP---RTAIYTAAIEMLTGGSADAKATSR----KPEIMADAAYYILSSNPPSLTGQFLID 307
            P   RT +       L      A+          E         + +N     G     
Sbjct: 180 NPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK---NGAIWKL 236

Query: 308 D 308
           D
Sbjct: 237 D 237

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 86.8 bits (216), Expect = 9e-20
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 17/101 (16%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           MI+   L+G T  ITGAS GIG AIA    K G+ ++I+    E                
Sbjct: 9   MID---LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEE----------KLKSLG 55

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                N    + ++ ++       +  + K   +DILV NA
Sbjct: 56  NALKDNYTIEVCNLANK----EECSNLISKTSNLDILVCNA 92

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 87.3 bits (216), Expect = 2e-19
 Identities = 57/351 (16%), Positives = 108/351 (30%), Gaps = 97/351 (27%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
                  +TG ++GIG  I  + + +G  +V+  +            + A ++++++   
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVT-------KGHEAVEKLKNSNHE 62

Query: 67  CLPCIV-DIRDEHA-VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
            +     D+ D  A + S  +     FG +DILVNNA  ++         K   +++ I 
Sbjct: 63  NVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAG-VAGFSVDADRFKA--MISDIG 119

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                LVK  +  E Q  ++   +                            +   +IN 
Sbjct: 120 EDSEELVKIYEKPEAQELMSETYELA--------------------------EECLKINY 153

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-------------------------- 218
            G   V++  +P L+ S+   I+N+S       +                          
Sbjct: 154 NGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVN 213

Query: 219 ---------------WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAI 260
                          W     AYT SK  ++     +A +       VN + P   +T  
Sbjct: 214 MLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTE- 270

Query: 261 YTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVL 311
                  +  G       +   E  A+    I        +G F    E+ 
Sbjct: 271 -------MNYGIG-----NYTAEEGAEHVVRIALFPDDGPSGFFYDCSELS 309

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 15/128 (11%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L      +TGA+ G+G  I    ++D   +    +  E               + +  G 
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHI-VYALGRNPE-----------HLAALAEIEG- 49

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
             P   DI  E   +  V   +     +D LV+ A+    T      + ++     +N  
Sbjct: 50  VEPIESDIVKEVLEEGGV-DKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVI 108

Query: 127 GT-YLVKA 133
               L + 
Sbjct: 109 VPAELSRQ 116

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 69.9 bits (172), Expect = 7e-14
 Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 13/162 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +  V   +     +D LV+ A+    T      + ++     +N      +S++ LP 
Sbjct: 62  LEEGGV-DKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPA 120

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           L+ +    ++ I+      P     +  Y  SK+ +   A    +E   + I V+ + P 
Sbjct: 121 LRAA-SGCVIYINSGAGNGP--HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSP- 176

Query: 258 TAIYTAAIEMLTGGSADAKATSR-----KPEIMADAAYYILS 294
               T    ML G         R     +P+ +A+A  +++ 
Sbjct: 177 GPTNT---PMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVID 215

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 18/122 (14%)

Query: 10  LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
           + + ITGA+ G+G A A      G +++++ + A             A+   + G   LP
Sbjct: 1   MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGA----------LAELAREVGARALP 48

Query: 70  CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
              D+ DE   +    A +++ G +D+LV+                  + M   +     
Sbjct: 49  A--DLADELEAK----ALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA 102

Query: 130 LV 131
            V
Sbjct: 103 FV 104

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 20/159 (12%), Positives = 39/159 (24%), Gaps = 17/159 (10%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
              A +++ G +D+LV+                  + M   +      V    L + +  
Sbjct: 56  EAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFV----LKHARFQ 111

Query: 202 NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RT 258
             A  +                 AY  +K  +        +E   + + +  +      T
Sbjct: 112 KGARAVFFGAYPRYVQ--VPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVAT 169

Query: 259 AIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNP 297
                    L          +  PE  A      L   P
Sbjct: 170 G--------LWAPLGGPPKGALSPEEAARKVLEGLFREP 200

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 85.5 bits (212), Expect = 2e-19
 Identities = 10/129 (7%), Positives = 31/129 (24%), Gaps = 16/129 (12%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
                   + + G    +G             +                        E +
Sbjct: 2   AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE---------------EAS 46

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDT-ANTPLKKYDLMNQ 122
               +       ++    +A    +     +D ++  A   +  +  + +  K  DLM +
Sbjct: 47  ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWK 106

Query: 123 INARGTYLV 131
            +   + + 
Sbjct: 107 QSIWTSTIS 115

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 76.6 bits (189), Expect = 4e-16
 Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 12/168 (7%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDT-ANTPLKKYDLMNQINARGTYLVSQKCLPYLKK 200
           A    +     +D ++  A   +  +  + +  K  DLM + +   + + S     +LK+
Sbjct: 66  AEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE 125

Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG--DNIAVNALWPRT 258
                +        L+       + Y ++K  +      +A +  G     A  A+ P  
Sbjct: 126 G--GLLTLAGAKAALDG--TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLP-V 180

Query: 259 AIYTAAIEMLTGGSADAKATSR-KPEIMADAAYYILSSNPPSLTGQFL 305
            + T    M      +A  +S    E + +  +  ++ N    +G  +
Sbjct: 181 TLDT---PMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLI 225

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 85.7 bits (213), Expect = 3e-19
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--AG 64
           + G    +T  S G+G A AL+ A++GA +++ ++  E        + +AA  +    +G
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNRE-------KLEAAASRIASLVSG 57

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                   DIR+   +           GG DILV + 
Sbjct: 58  AQVDIVAGDIREPGDIDRLF-EKARDLGGADILVYST 93

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 87.3 bits (217), Expect = 6e-19
 Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TGA+RGIG  IA   A+DGA +V           + G      +  +  GG 
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAID--------VDGAAEDLKRVADKVGGT 262

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNA 101
            L    D+  + AV        +  GG +DILVNNA
Sbjct: 263 ALTL--DVTADDAVDKITAHVTEHHGGKVDILVNNA 296

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 87.5 bits (217), Expect = 8e-19
 Identities = 68/302 (22%), Positives = 106/302 (35%), Gaps = 71/302 (23%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
             G    +TGA  G+G+  AL  A+ GA +V                      V D GG 
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVV----------------------VNDLGGT 54

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                   R    V   +  A    GG  +    A   S+ D                  
Sbjct: 55  HSGDGASQRAADIVVDEIRKA----GGEAV----ADYNSVIDG----------------- 89

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                           +  A+  FG +DILVNNA  +       T  + ++L+N ++ +G
Sbjct: 90  -------------AKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKG 136

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGMSMCALGMAEEF 244
           ++  +Q   PY+KK N+  I+  S    +    + N   V YT +K G+   A  +A E 
Sbjct: 137 SFKCTQAAFPYMKKQNYGRIIMTSSNSGI----YGNFGQVNYTAAKMGLIGLANTVAIEG 192

Query: 245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQF 304
             +N+  N + P     TAA  M  G   D      KP+++A    Y+   +        
Sbjct: 193 ARNNVLCNVIVP-----TAASRMTEGILPDILFNELKPKLIAPVVAYLCHESCEDNGSYI 247

Query: 305 LI 306
             
Sbjct: 248 ES 249

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 84.7 bits (210), Expect = 9e-19
 Identities = 61/318 (19%), Positives = 116/318 (36%), Gaps = 60/318 (18%)

Query: 8   SGLTIFITGASRGIGKAIALK-AAKDGANIVIAA---KTAEPHPKLPGTIYSAAKEVEDA 63
                 +TG ++GIG AI          ++V+ A      +          +A ++++  
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQ----------AAVQQLQAE 52

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK-KYDLMNQ 122
           G +     +DI D  ++++  +    ++GG+D+LVNNA  I+      TP   + ++  +
Sbjct: 53  GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA-GIAFKVADPTPFHIQAEVTMK 111

Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 182
            N  GT  V               +        +VN +S +S+    +   +        
Sbjct: 112 TNFFGTRDV-----------CTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 160

Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
                  ++++ L  L                  P       AY ++K G+++ +   A 
Sbjct: 161 T------ITEEELVGLMNKFVEDTKKGVHQKEGWPSS-----AYGVTKIGVTVLSRIHAR 209

Query: 243 EF----KGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYY--IL 293
           +     KGD I +NA  P   RT         + G  A     ++ PE  A+   Y  +L
Sbjct: 210 KLSEQRKGDKILLNACCPGWVRTD--------MAGPKA-----TKSPEEGAETPVYLALL 256

Query: 294 SSNPPSLTGQFLIDDEVL 311
             +     GQF+ +  V 
Sbjct: 257 PPDAEGPHGQFVSEKRVE 274

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 83.7 bits (208), Expect = 1e-18
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 16/118 (13%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           +TG SRGIG+AIA      G  + IA++  E             +  +  G   LP  ++
Sbjct: 7   VTGGSRGIGRAIAEALVARGYRVAIASRNPE-------------EAAQSLGAVPLPTDLE 53

Query: 74  IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
             D    +  V  A++  GG+ +LV+ A+            +++  +  ++    +L+
Sbjct: 54  KDD---PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLL 108

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 72.9 bits (180), Expect = 6e-15
 Identities = 23/119 (19%), Positives = 50/119 (42%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           + +  V  A++  GG+ +LV+ A+            +++  +  ++    +L++Q   P+
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPH 115

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           + ++    +L I               AYT +K  +      +A+E+    I VN L P
Sbjct: 116 MAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 84.7 bits (210), Expect = 1e-18
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 5/133 (3%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVI--AAKTAEPHPKLPGTIYSAAK 58
           M +  +  G  + +TGA  G+G+A AL  A+ GA +V+       +   K         +
Sbjct: 1   MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE 60

Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
           E+   GG  +     +      +  V  A+D FG ID++VNNA  +     +    + +D
Sbjct: 61  EIRRRGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD 117

Query: 119 LMNQINARGTYLV 131
           ++ +++ RG++ V
Sbjct: 118 IIQRVHLRGSFQV 130

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 70.5 bits (173), Expect = 1e-13
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 12/168 (7%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           +  V  A+D FG ID++VNNA  +     +    + +D++ +++ RG++ V++    ++K
Sbjct: 80  EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 139

Query: 200 KSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           K N+  I+  +    +    + N     Y+ +K G+   A  +  E + +NI  N + P 
Sbjct: 140 KQNYGRIIMTASASGI----YGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP- 194

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
                A   M      +    + KPE +A    + L        G   
Sbjct: 195 ----NAGSRMTETVMPEDLVEALKPEYVAPLVLW-LCHESCEENGGLF 237

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 18/98 (18%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
                  ++ +TG +RGIG AIA + A DG  + +                +        
Sbjct: 10  KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAV----------------THRGSGAPK 53

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
           G   +    D+ D  AV  A  A  +  G +++LV+NA
Sbjct: 54  GLFGVEV--DVTDSDAVDRAFTAVEEHQGPVEVLVSNA 89

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 26/136 (19%)

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNAS------AISLTDTANTPLKKYDLMNQINARG 186
            +    +  A  A  +  G +++LV+NA        + +T+      +K++ +   N  G
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANLTG 115

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM---- 240
            + V+Q+    ++++    ++ I     L        N   Y  SK G+    +GM    
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG----NQANYAASKAGV----IGMARSI 167

Query: 241 AEEFKGDNIAVNALWP 256
           A E    N+  N + P
Sbjct: 168 ARELSKANVTANVVAP 183

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 19/160 (11%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           ++      +TG + G+G A   +    GA +V+     E               V D G 
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE-------------DVVADLGD 52

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA----SAISLTDTANTPLKKYDLMN 121
                  D+ DE AV SA+    +  G + I+VN A    +   L+      L  +  + 
Sbjct: 53  RARFAAADVTDEAAVASAL-DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIV 111

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
            IN  G++ V      E  +             +++N AS
Sbjct: 112 DINLVGSFNV-LRLAAERIAKTEPVGPNAEERGVIINTAS 150

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 39/198 (19%), Positives = 69/198 (34%), Gaps = 51/198 (25%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA----SAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
            + SA+    +  G + I+VN A    +   L+      L  +  +  IN  G++ V + 
Sbjct: 66  AVASAL-DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRL 124

Query: 194 CLPYLKKSNHAH--------ILNISPPLNLNPFWFKNHVA----------YTISKYGMSM 235
               + K+            I+N +             VA          Y+ SK G+  
Sbjct: 125 AAERIAKTEPVGPNAEERGVIINTAS------------VAAFDGQIGQAAYSASKGGVVG 172

Query: 236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKAT--------SR--KPEIM 285
             L +A +     I V  + P     T    +L     +A+A+        SR   P+  
Sbjct: 173 MTLPIARDLASHRIRVMTIAPGL-FDT---PLLASLPEEARASLGKQVPHPSRLGNPDEY 228

Query: 286 ADAAYYILSSNPPSLTGQ 303
              A +I+ +  P L G+
Sbjct: 229 GALAVHIIEN--PMLNGE 244

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 82.2 bits (204), Expect = 4e-18
 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 18/95 (18%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
               ++ +TG +RGIG AIA   A  G  + I                +        G  
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAI----------------TYRSGEPPEGFL 62

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            + C  DI D   V+ A     +  G +++L+ NA
Sbjct: 63  AVKC--DITDTEQVEQAYKEIEETHGPVEVLIANA 95

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 24/130 (18%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL-----KKYDLMNQINARGTYLVSQ 192
           +++ A     +  G +++L+ NA  +    T +  L     + +  + + N  GT+ V +
Sbjct: 73  QVEQAYKEIEETHGPVEVLIANA-GV----TKDQLLMRMSEEDFTSVVETNLTGTFRVVK 127

Query: 193 KCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGM----AEEFKG 246
           +    + ++    ++ IS  + L  +         Y  SK G+    +G     A E   
Sbjct: 128 RANRAMLRAKKGRVVLISSVVGLLGSA----GQANYAASKAGL----VGFARSLARELGS 179

Query: 247 DNIAVNALWP 256
            NI  N + P
Sbjct: 180 RNITFNVVAP 189

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 80.8 bits (200), Expect = 1e-17
 Identities = 15/126 (11%), Positives = 40/126 (31%), Gaps = 16/126 (12%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           +S   + + G    +G AI     K+G  ++    +A                 +     
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND---------------QADSNI 45

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINA 125
            +    +  ++        A+  +   +D +   A      + ++   +K  DLM + + 
Sbjct: 46  LVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSV 105

Query: 126 RGTYLV 131
             + + 
Sbjct: 106 WSSAIA 111

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 73.5 bits (181), Expect = 4e-15
 Identities = 21/157 (13%), Positives = 53/157 (33%), Gaps = 10/157 (6%)

Query: 142 AVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK 200
              A+  +   +D +   A      + ++   +K  DLM + +   + + ++    +LK 
Sbjct: 62  EQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP 121

Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG--DNIAVNALWPRT 258
                +        + P    + + Y ++K  +      +A +  G  DN AV  + P  
Sbjct: 122 G--GLLQLTGAAAAMGP--TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP-V 176

Query: 259 AIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSS 295
            + T         +  +  T      +++      + 
Sbjct: 177 TLDTPMNRKWMPNADHSSWT--PLSFISEHLLKWTTE 211

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 82.8 bits (205), Expect = 3e-17
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 9/129 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV----ED 62
                + ITGA  G+GK  +L+ AK GA +V+       + +  G    AA  V      
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQ--GGNSKAADVVVDEIVK 63

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
            GG  +    ++ D       V  AV  FG + +++NNA  +          K Y L+  
Sbjct: 64  NGGVAVADYNNVLD---GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVID 120

Query: 123 INARGTYLV 131
           ++  G + V
Sbjct: 121 VHLNGAFAV 129

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 76.3 bits (188), Expect = 4e-15
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKE 59
              T  L    + ITGA  G+GK  A   AK GA +V+   K A               E
Sbjct: 314 GAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT----------KTVDE 363

Query: 60  VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
           ++ AGG   P   D+  +   ++ +   +DK+G IDILVNNA  +     A    +++D 
Sbjct: 364 IKAAGGEAWPDQHDVAKD--SEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDS 421

Query: 120 MNQINARGTYLV 131
           + Q++  GT+ +
Sbjct: 422 VQQVHLIGTFNL 433

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 73.2 bits (180), Expect = 4e-14
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 12/168 (7%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
           ++ +   +DK+G IDILVNNA  +     A    +++D + Q++  GT+ +S+   PY  
Sbjct: 383 EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFV 442

Query: 200 KSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           +     I+NI+    +  N         Y+ SK G+   +  MA E   +NI VN + P 
Sbjct: 443 EKQFGRIINITSTSGIYGNF----GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP- 497

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
                A   M      +        + +A    Y L ++   +TG+  
Sbjct: 498 ----HAETAMTLSIMREQDKNLYHADQVAPLLVY-LGTDDVPVTGETF 540

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 12/168 (7%)

Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
              V  AV  FG + +++NNA  +          K Y L+  ++  G + V++   PY +
Sbjct: 79  DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQ 138

Query: 200 KSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           K  +  I+N S P  L    + N     Y  +K  +   A  +A+E    NI  NA+ P 
Sbjct: 139 KQKYGRIVNTSSPAGL----YGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAP- 193

Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
                A   M              PE +A    Y LSS    LTGQF 
Sbjct: 194 ----LARSRMTESIMPPPMLEKLGPEKVAPLVLY-LSSAENELTGQFF 236

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 79.1 bits (196), Expect = 4e-17
 Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 25/152 (16%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            I ITGAS G+G  +A     +G    +  ++     KL     +    + +  G     
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSES---KL----STVTNCLSNNVG-YRAR 54

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG-TY 129
             D+     V+               +V++A +           ++   + + N      
Sbjct: 55  --DLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAIN 109

Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
           +++          V    D+   +   V   S
Sbjct: 110 VLRE--------LVKRYKDQPVNV---VMIMS 130

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 63.7 bits (156), Expect = 8e-12
 Identities = 20/161 (12%), Positives = 51/161 (31%), Gaps = 13/161 (8%)

Query: 141 SAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
             V    ++       +V++A +           ++   + + N      V ++ +   K
Sbjct: 60  QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYK 119

Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP--- 256
                +++ I       P        Y   K+ +      +  E KG  + + A++P   
Sbjct: 120 DQP-VNVVMIMSTAAQQP--KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGM 176

Query: 257 RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNP 297
            T  +  +      G +   ++    E  A   +  L++  
Sbjct: 177 ATEFWETS------GKSLDTSSFMSAEDAALMIHGALANIG 211

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 76.9 bits (190), Expect = 3e-16
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 24/125 (19%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           +  +TG + G+G+A AL     G  +V+                    ++   G + +  
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVL-------------------DLRREGEDLIYV 44

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA----SAISLTDTANTPLKKYDLMNQINAR 126
             D+  E  V+ AV  A +    +  +V+ A    +   L       L+ +  + ++N  
Sbjct: 45  EGDVTREEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLL 103

Query: 127 GTYLV 131
           GT+ V
Sbjct: 104 GTFNV 108

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 33/188 (17%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA----SAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
           +++ AV  A +    +  +V+ A    +   L       L+ +  + ++N  GT+ V + 
Sbjct: 53  DVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111

Query: 194 CLPYLKKSNHAH------ILNISPPLNLNPFWFKN--HVAYTISKYGMSMCALGMAEEFK 245
               ++++          I+N +                AY  SK G+    L  A E  
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEG----QIGQAAYAASKGGVVALTLPAARELA 167

Query: 246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKAT--------SR--KPEIMADAAYYILSS 295
           G  I V  + P     T    +L G    AKA+         R  +PE  A    +IL +
Sbjct: 168 GWGIRVVTVAPGL-FDT---PLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN 223

Query: 296 NPPSLTGQ 303
             P L G+
Sbjct: 224 --PMLNGE 229

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 76.6 bits (189), Expect = 3e-16
 Identities = 53/306 (17%), Positives = 100/306 (32%), Gaps = 80/306 (26%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           ++ +TGA+RGIG  +  +  KD     I A   +            A E++    + +  
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV---------EKATELKSIKDSRVHV 55

Query: 71  I-VDIRDEHAVQSAVNAAVDKFG--GIDILVNNASAISLTDTANTPLKKYDLMN--QINA 125
           + + +  + ++ + V+   +  G  G+ +L+NNA  + L+   NT   +  +     +N 
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNA-GVLLSYGTNTEPNRAVIAEQLDVNT 114

Query: 126 RGTYLV-KASQGLEIQSAVNAAVDKFGGIDILVNNASAI--SLTDTANTPLKKYDLMNQI 182
               L+ +    L   +A   + D+       V   S+   S+TD               
Sbjct: 115 TSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD--------------- 159

Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
                                          N +       +AY +SK  ++M    +A 
Sbjct: 160 -------------------------------NTSGSAQFPVLAYRMSKAAINMFGRTLAV 188

Query: 243 EFKGDNIAVNAL---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPS 299
           + K DN+ V      W +T         L G +A         E          +    S
Sbjct: 189 DLKDDNVLVVNFCPGWVQTN--------LGGKNAA-----LTVEQSTAELISSFNKLDNS 235

Query: 300 LTGQFL 305
             G+F 
Sbjct: 236 HNGRFF 241

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 76.2 bits (188), Expect = 5e-16
 Identities = 40/294 (13%), Positives = 78/294 (26%), Gaps = 75/294 (25%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            I I+G + GIG A        G  IV                      + DA       
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGID-------------------IRDAEVIA--- 40

Query: 71  IVDIRDEHAVQSAVNAAVDK-FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
             D+      + A+   + K   G+D LV  A     T            +  +N  G  
Sbjct: 41  --DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL-------GNVVSVNYFGAT 91

Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 189
            +  +    ++     A          V  +S                         +  
Sbjct: 92  ELMDAFLPALKKGHQPAA---------VVISSV-----------------------ASAH 119

Query: 190 VSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI 249
           ++    P                +         ++AY  SK  +++     A  +    +
Sbjct: 120 LAFDKNPLALALEAGEEAKARAIVEHAGE-QGGNLAYAGSKNALTVAVRKRAAAWGEAGV 178

Query: 250 AVNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILS 294
            +N + P  A  T  ++         ++ ++         +P  MA    +++S
Sbjct: 179 RLNTIAP-GATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMS 231

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 75.1 bits (185), Expect = 1e-15
 Identities = 53/319 (16%), Positives = 97/319 (30%), Gaps = 107/319 (33%)

Query: 11  TIFITGASRGIGKAIA---LKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
           +I ITG +RG+G  +    L   +   ++    +  E   +L        +++     N 
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL--------EDLAKNHSNI 74

Query: 68  LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 127
               +D+R+      A +  V                                       
Sbjct: 75  HILEIDLRNF----DAYDKLVADI------------------------------------ 94

Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN--QINAR 185
                              V K  G+++L NNA  I+      T ++  +L++  Q N  
Sbjct: 95  -----------------EGVTKDQGLNVLFNNA-GIAPKSARITAVRSQELLDTLQTNTV 136

Query: 186 GTYLVSQKCLPYLKKS-----------NHAHILNISPPL-----NLNPFWFKNHVAYTIS 229
              ++++ CLP LKK+             A I+N+S  L     N +   +    AY  S
Sbjct: 137 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY----AYRTS 192

Query: 230 KYGMSMCALGMAEEFKGDNIAVNAL---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMA 286
           K  ++     ++ +     I   +L   W +T         + G SA             
Sbjct: 193 KSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD--------MGGSSAP-----LDVPTST 239

Query: 287 DAAYYILSSNPPSLTGQFL 305
                 +S       G F+
Sbjct: 240 GQIVQTISKLGEKQNGGFV 258

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 74.9 bits (185), Expect = 2e-15
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 22/95 (23%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           +    + +  ASRGIG+A+A   +++GA + I A+  E               ++ +G  
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE--------------LLKRSGHR 62

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
            + C  D+R        ++   +K   +DILV NA
Sbjct: 63  YVVC--DLRK------DLDLLFEKVKEVDILVLNA 89

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 37/205 (18%), Positives = 69/205 (33%), Gaps = 31/205 (15%)

Query: 123 INARGTYLVKASQG----LEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 178
           I AR   L+K S       +++  ++   +K   +DILV NA             + +  
Sbjct: 48  ICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKE 107

Query: 179 MNQINARGTYLVSQKCLPYLKKSNHAHILNIS--------PPLNLNPFWFKNHVAYTISK 230
                      + +  LP +K+     I+ I+          L               ++
Sbjct: 108 AIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYT----------SNSAR 157

Query: 231 YGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPE 283
             ++     ++ E     I VN + P     T  ++ L       +  S+       KPE
Sbjct: 158 MALTGFLKTLSFEVAPYGITVNCVAP-GWTETERVKELLSEEKKKQVESQIPMRRMAKPE 216

Query: 284 IMADAAYYILSSNPPSLTGQ-FLID 307
            +A    ++ S     LTGQ  ++D
Sbjct: 217 EIASVVAFLCSEKASYLTGQTIVVD 241

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 17/124 (13%), Positives = 42/124 (33%), Gaps = 29/124 (23%)

Query: 8   SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
           + + I + GAS  +G A+  +  K  A ++ A + +                        
Sbjct: 2   NAMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDVT-------------------- 40

Query: 68  LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 127
               VDI +  +++       ++ G +D +V+   + + +       +K  +       G
Sbjct: 41  ----VDITNIDSIK----KMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGG 92

Query: 128 TYLV 131
              +
Sbjct: 93  QINL 96

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 72.3 bits (178), Expect = 5e-15
 Identities = 19/162 (11%), Positives = 50/162 (30%), Gaps = 12/162 (7%)

Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
           ++    ++ G +D +V+   + + +       +K  +       G   +    +  L   
Sbjct: 48  SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND- 106

Query: 202 NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIY 261
                   +  +  +P       +  ++   ++  A   A E     I +N + P   + 
Sbjct: 107 -KGSFTLTTGIMMEDP--IVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSP-NVLE 161

Query: 262 TAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQ 303
            +  ++      +       P   A  A     S   + TG+
Sbjct: 162 ESWDKL------EPFFEGFLPVPAAKVARAFEKSVFGAQTGE 197

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 75.1 bits (185), Expect = 3e-15
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGAN--IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
            + ITG S GIG  +A++ A D +    V A  T     K  G ++ AA+ +    G+  
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYA--TLR-DLKTQGRLWEAARALACPPGSLE 60

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
              +D+RD  +V +A     +  G +D+LV NA
Sbjct: 61  TLQLDVRDSKSVAAARERVTE--GRVDVLVCNA 91

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 25/174 (14%), Positives = 49/174 (28%), Gaps = 27/174 (15%)

Query: 139 IQSAVNAAVDKFGGIDILVNNA-----SAISLTDTANTPLKKYDLMNQ--INARGTYLVS 191
           + +A     +  G +D+LV NA       +              + +   +N  GT  + 
Sbjct: 72  VAAARERVTE--GRVDVLVCNAGLGLLGPLEALGED-------AVASVLDVNVVGTVRML 122

Query: 192 QKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKY---GMSMCALGMAEEFKGDN 248
           Q  LP +K+     +L       L    F +   Y  SK+   G+      +A       
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSVGGLMGLPFND--VYCASKFALEGLCES---LAVLLLPFG 177

Query: 249 IAVNALWP---RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPS 299
           + ++ +      TA     +             +        A    +      
Sbjct: 178 VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQ 231

>3bkr_A Sterol carrier protein-2 like-3; mosquito, fatty acid, palmitic acid, cholesterol, lipid binding protein; HET: PLM; 1.40A {Aedes aegypti} PDB: 3bks_A* Length = 126

 Score = 69.7 bits (170), Expect = 7e-15
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 7/80 (8%)

Query: 326 NGAAEGSWHIDLKTGSGSSGR-------GKPSSTVDATLTMTEKNFIALFEGKLKPTSAF 378
            G    S  +D      S            P+  +DA++T+ + +F  +   +    +  
Sbjct: 43  EGKVVRSVVLDFNDLKISEIELAVTSTADYPAERIDASITIDDNDFYLVATKETSFAALI 102

Query: 379 MTGKLKISGNLQKAMKLEKL 398
             GK+ I+GN Q  + L++ 
Sbjct: 103 EQGKVDITGNKQAFLTLDEK 122

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 61.9 bits (151), Expect = 6e-11
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 14/95 (14%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            +  T+ ITGA+ G+G   A + A+ GA +++A +                       G 
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTR----------KGEAAARTMAGQ 63

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                +D++D     S+V    D   G D+L+NNA
Sbjct: 64  VEVRELDLQD----LSSVRRFADGVSGADVLINNA 94

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 15/97 (15%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           + G    +   +  +G   A   A +GA +V+  +  +           AA  V      
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA-------AADSVNKRFKV 169

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASA 103
            +    +  D+ +   AV  A         +    + 
Sbjct: 170 NV-TAAETADDASRAEAVKGA-------HFVFTAGAI 198

>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* Length = 658

 Score = 50.8 bits (120), Expect = 5e-07
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 332 SWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQK 391
           ++ ++LK    ++ RG  S     T+++   +   L   ++        GKLK SGN   
Sbjct: 573 NYLLELKNSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKLKSSGN--- 629

Query: 392 AMKLEKLMGAL 402
            + L +L G L
Sbjct: 630 PLLLGQLFGML 640

>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} Length = 668

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 332 SWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQK 391
              + L+ G  +   G  +   D T+ +T+     +   KL   +A   G +K+ G+   
Sbjct: 582 DIALTLRNGVLTQRVGSLNPKADVTVKLTKPTLDQIAARKLDLPTAIKQGTVKLDGD--- 638

Query: 392 AMKLEKLMGAL 402
             KL +  G L
Sbjct: 639 GKKLGEFFGLL 649

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 47/320 (14%), Positives = 91/320 (28%), Gaps = 38/320 (11%)

Query: 14  ITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHPKLPGTI-----YSAAKEVEDAGGNC 67
           + GAS G G A  + AA   GA+ +             GT       +  K  + AG   
Sbjct: 66  VIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYS 125

Query: 68  LPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                D   + A    +     + GG +D++V + ++       +  +K+  L       
Sbjct: 126 KSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTY 185

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
               +  ++   IQ+++  A  +     I V       L   A   L+   ++       
Sbjct: 186 TATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDA---LEGAGVL------- 235

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
                         ++ A  +  S       +    H A   +K  +   A  +      
Sbjct: 236 --------------ADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAK 281

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------KPEIMADAAYYILSSNPPSL 300
                N    + ++ T A   +           +        E   +    +        
Sbjct: 282 HGGGANVAVLK-SVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQ 340

Query: 301 TGQFLIDDEVLKAQHIDLEQ 320
            GQ    DE  + +  D E 
Sbjct: 341 DGQPAEVDEQNRLRLDDWEL 360

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* Length = 405

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 6/117 (5%)

Query: 9   GLTIFITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHPKLPGTIYSAA-----KEVED 62
              + + GAS G G A  + AA   GA+ +            PGT          K    
Sbjct: 47  PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ 106

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
            G        D   +   Q  ++A     G +D ++ + ++   T      +    L
Sbjct: 107 KGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSAL 163

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	406
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.98
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.91
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.89
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.87
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.86
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.86
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.86
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.86
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.85
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.85
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.85
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.84
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.84
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.83
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.83
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.83
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.82
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.82
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.81
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.81
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.81
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.8
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.8
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.8
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.8
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.79
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.79
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.79
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.79
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.79
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.79
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.79
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.79
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.78
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.78
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.78
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.78
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.78
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.78
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.77
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.77
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.77
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.77
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.77
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.76
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.75
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.75
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.74
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.74
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.74
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.73
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.73
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.73
1ikt_A	120	Estradiol 17 beta-dehydrogenase 4; ALFA-beta fold,	99.73
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.72
2cx7_A	130	Sterol carrier protein 2; sterol transfer, SCP-2,	99.72
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.72
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.71
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.7
1c44_A	123	Protein (sterol carrier protein 2); non specific l	99.7
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.69
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.69
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.69
3bkr_A	126	Sterol carrier protein-2 like-3; mosquito, fatty a	99.68
1pz4_A	116	Sterol carrier protein 2; alpha and beta, lipid bi	99.68
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.67
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.67
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.65
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.65
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.65
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.64
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.63
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.63
2qzt_A	111	Sterol carrier protein 2-like 2; mosquito, fatty a	99.62
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.62
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.61
3cnu_A	116	Predicted coding region AF_1534; structural GE MCS	99.61
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.61
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.6
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.56
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.52
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.45
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.44
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.43
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.42
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.41
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.4
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.38
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.38
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.35
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.29
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.18
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.09
2yhe_A	668	SEC-alkyl sulfatase; hydrolase, inversion, metallo	98.52
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.92
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.89
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.82
2cfu_A	658	SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1	98.74
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.72
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.51
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.47
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.42
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.39
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.34
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.32
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.32
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.23
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.23
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.06
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.06
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.02
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.02
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.0
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.98
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.98
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.95
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.94
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.93
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.92
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.91
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.89
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.81
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.73
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.7
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.69
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.63
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.6
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.55
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.54
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.51
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.5
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.5
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.49
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.4
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.4
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.38
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.37
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.36
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.32
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.25
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.2
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.15
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.13
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.12
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.11
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.11
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.03
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.01
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.0
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.98
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.93
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.91
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.91
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.87
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.81
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.76
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.7
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.69
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.68
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.67
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.66
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.62
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.61
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.61
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.6
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.6
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.57
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.55
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.54
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.53
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.52
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.51
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.47
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.43
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.43
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.42
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.38
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.37
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.37
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.35
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.33
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.29
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.24
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.24
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.18
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.14
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.13
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.11
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.09
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.09
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.02
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.02
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.02
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.92
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.91
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.9
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	95.86
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.83
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.75
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	95.74
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.72
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	95.64
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	95.61
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.57
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.56
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.52
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.51
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.51
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.45
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.41
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.39
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.38
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.38
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.29
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.25
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.24
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.19
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.17
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.12
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	95.07
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	94.64
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	94.61
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	94.56
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	94.56
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	94.49
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	94.41
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.4
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	94.4
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	94.39
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.31
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.23
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	94.07
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	94.05
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	94.0
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	93.93
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	93.85
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	93.79
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	93.62
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	93.58
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	93.55
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	93.49
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.49
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	93.39
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	93.37
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	93.21
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	93.16
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	93.12
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.11
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	93.06
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	93.04
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	93.02
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	92.88
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	92.78
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	92.76
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	92.74
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	92.73
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	92.68
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	92.52
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	92.5
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	92.49
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	92.48
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	92.47
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	92.4
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	92.37
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	92.35
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	92.34
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	92.31
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	92.18
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	92.17

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.5e-56  Score=414.05  Aligned_cols=243  Identities=24%  Similarity=0.304  Sum_probs=216.5

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |+++.+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++.+.+.++.++.+|++|++++
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~-------~~~~~~~l~~~g~~~~~~~~Dv~~~~~v   73 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL-------LAESVDTLTRKGYDAHGVAFDVTDELAI   73 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH-------HHHHHHHHHHTTCCEEECCCCTTCHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEeeCCCHHHH
Confidence            788889999999999999999999999999999999999998764       4567888888899999999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.++||+||+||||||+....++.                                                  
T Consensus        74 ~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~--------------------------------------------------  103 (255)
T 4g81_D           74 EAAFSKLDAEGIHVDILINNAGIQYRKPMV--------------------------------------------------  103 (255)
T ss_dssp             HHHHHHHHHTTCCCCEEEECCCCCCCCCGG--------------------------------------------------
T ss_pred             HHHHHHHHHHCCCCcEEEECCCCCCCCChh--------------------------------------------------
Confidence            999999999999999999999987654433                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                               +++.++|++++++|+.|+|+++|+++|+|.++ ++|+|||+||..+..+  .++..+|++||+|+.+|||+
T Consensus       104 ---------~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~--~~~~~~Y~asKaal~~ltr~  172 (255)
T 4g81_D          104 ---------ELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA--RPTVAPYTAAKGGIKMLTCS  172 (255)
T ss_dssp             ---------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB--CTTCHHHHHHHHHHHHHHHH
T ss_pred             ---------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC--CCCchhHHHHHHHHHHHHHH
Confidence                     89999999999999999999999999999765 6799999999999987  58899999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||.||+++|||||+|+||+ +.|++.+.....+        ..|..|+.+|||||++++||+|+.++|+||+.+ +|||+
T Consensus       173 lA~ela~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          173 MAAEWAQFNIQTNAIGPGY-ILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHHHGGGTEEEEEEEECS-BCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhcccCeEEEEEeeCC-CCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence            9999999999999999996 6666555443321        236678899999999999999999999999999 88887


Q ss_pred             HH
Q psy6113         311 LK  312 (406)
Q Consensus       311 ~~  312 (406)
                      +.
T Consensus       252 ~A  253 (255)
T 4g81_D          252 LA  253 (255)
T ss_dssp             GG
T ss_pred             Ee
Confidence            63

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2e-55  Score=409.42  Aligned_cols=239  Identities=21%  Similarity=0.292  Sum_probs=212.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.++++..+.++.++++|++|++++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~-------~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~   75 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDR-------LNQIVQELRGMGKEVLGVKADVSKKKDVEEFV   75 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            58999999999999999999999999999999999998765       55678888889999999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+.....                                                        
T Consensus        76 ~~~~~~~G~iDiLVNNAGi~~~~~--------------------------------------------------------   99 (254)
T 4fn4_A           76 RRTFETYSRIDVLCNNAGIMDGVT--------------------------------------------------------   99 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTC--------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCcccCCCC--------------------------------------------------------
Confidence            999999999999999999764322                                                        


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                        ++.+++.++|++++++|+.|+|+++|+++|+|+++++|+|||+||.++..+  .++..+|++||+|+.+|||+||.||
T Consensus       100 --~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~--~~~~~~Y~asKaal~~ltr~lA~el  175 (254)
T 4fn4_A          100 --PVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG--GFAGAPYTVAKHGLIGLTRSIAAHY  175 (254)
T ss_dssp             --CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS--SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC--CCCChHHHHHHHHHHHHHHHHHHHh
Confidence              223899999999999999999999999999999999999999999999987  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+||+ +.|++........          ..+..|+.+|||||++++||+|+.++|+||+.+ +|||++
T Consensus       176 a~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          176 GDQGIRAVAVLPGT-VKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             GGGTEEEEEEEECS-BCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhCeEEEEEEeCC-CCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence            99999999999996 6665432222111          124467889999999999999999999999999 777764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=7.3e-55  Score=402.43  Aligned_cols=236  Identities=28%  Similarity=0.360  Sum_probs=206.2

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.|..+|+||++|||||++|||+++|++|+++|++|++++|+.+         +++.+++.+.+.++.++.+|++|++++
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~---------~~~~~~~~~~g~~~~~~~~Dv~d~~~v   71 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP---------DETLDIIAKDGGNASALLIDFADPLAA   71 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC---------HHHHHHHHHTTCCEEEEECCTTSTTTT
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH---------HHHHHHHHHhCCcEEEEEccCCCHHHH
Confidence            78888999999999999999999999999999999999999754         246778888899999999999999988


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++     +|+||+||||||+....++                                                   
T Consensus        72 ~~~~~-----~g~iDiLVNNAGi~~~~~~---------------------------------------------------   95 (247)
T 4hp8_A           72 KDSFT-----DAGFDILVNNAGIIRRADS---------------------------------------------------   95 (247)
T ss_dssp             TTSST-----TTCCCEEEECCCCCCCCCG---------------------------------------------------
T ss_pred             HHHHH-----hCCCCEEEECCCCCCCCCc---------------------------------------------------
Confidence            77653     5889999999998655443                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                              .+++.++|++++++|+.|+|+++|+++|+|++++ +|+|||+||..+..+  .++.++|++||+|+.+|||+
T Consensus        96 --------~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g--~~~~~~Y~asKaav~~ltr~  165 (247)
T 4hp8_A           96 --------VEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG--GIRVPSYTAAKHGVAGLTKL  165 (247)
T ss_dssp             --------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CSSCHHHHHHHHHHHHHHHH
T ss_pred             --------ccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC--CCCChHHHHHHHHHHHHHHH
Confidence                    3899999999999999999999999999998774 799999999999987  47899999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||.||+++|||||+|+||+ +.|++.+......        ..|..|+.+|||||++++||+|+.++|+||+.+ +|||+
T Consensus       166 lA~Ela~~gIrVNaV~PG~-i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          166 LANEWAAKGINVNAIAPGY-IETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             HHHHHGGGTEEEEEEEECS-BCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhcCeEEEEEeeCC-CCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECccc
Confidence            9999999999999999996 6666655443321        246788999999999999999999999999999 88887


Q ss_pred             HH
Q psy6113         311 LK  312 (406)
Q Consensus       311 ~~  312 (406)
                      +.
T Consensus       245 ~A  246 (247)
T 4hp8_A          245 LA  246 (247)
T ss_dssp             GG
T ss_pred             cc
Confidence            63

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.4e-52  Score=394.03  Aligned_cols=233  Identities=23%  Similarity=0.307  Sum_probs=200.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++   +..++.+.++.++++|++|++++++++
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~-------l~---~~~~~~g~~~~~~~~Dv~~~~~v~~~~   94 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV-------LD---AAIAEIGGGAVGIQADSANLAELDRLY   94 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HH---HHHHHHCTTCEEEECCTTCHHHHHHHH
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HH---HHHHHcCCCeEEEEecCCCHHHHHHHH
Confidence            47999999999999999999999999999999999998654       22   333445788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+....++                                                       
T Consensus        95 ~~~~~~~G~iDiLVNNAG~~~~~~~-------------------------------------------------------  119 (273)
T 4fgs_A           95 EKVKAEAGRIDVLFVNAGGGSMLPL-------------------------------------------------------  119 (273)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCT-------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999998655444                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+++.++|++++++|+.|+|+++|+++|+|+++  |+||++||..+..+  .+++.+|++||+|+.+|||+||.||
T Consensus       120 ----~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~--~~~~~~Y~asKaav~~ltr~lA~El  191 (273)
T 4fgs_A          120 ----GEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTG--TPAFSVYAASKAALRSFARNWILDL  191 (273)
T ss_dssp             ----TSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ----hhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccC--CCCchHHHHHHHHHHHHHHHHHHHh
Confidence                389999999999999999999999999999764  89999999999887  5889999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC-------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS-------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++|||||+|+||+ +.|++........             ..|..|+.+|||||++++||+|+.++|+||+.| +|||.
T Consensus       192 a~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          192 KDRGIRINTLSPGP-TETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             TTSCEEEEEEEECS-BCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cccCeEEEEEeeCC-CCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence            99999999999996 6665544332221             125678899999999999999999999999999 77765


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       271 s  271 (273)
T 4fgs_A          271 A  271 (273)
T ss_dssp             T
T ss_pred             h
Confidence            3

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.7e-52  Score=384.44  Aligned_cols=226  Identities=26%  Similarity=0.292  Sum_probs=194.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .-|+||++|||||++|||+++|++|+++|++|++++|+.+.+++.             .+.++..+.+|++|++++++++
T Consensus         7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~~~~   73 (242)
T 4b79_A            7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-------------RHPRIRREELDITDSQRLQRLF   73 (242)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-------------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-------------hcCCeEEEEecCCCHHHHHHHH
Confidence            347999999999999999999999999999999999998876542             2457889999999999987766


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                          ++||+||+||||||+..+  .                                                       
T Consensus        74 ----~~~g~iDiLVNNAGi~~~--~-------------------------------------------------------   92 (242)
T 4b79_A           74 ----EALPRLDVLVNNAGISRD--R-------------------------------------------------------   92 (242)
T ss_dssp             ----HHCSCCSEEEECCCCCCG--G-------------------------------------------------------
T ss_pred             ----HhcCCCCEEEECCCCCCC--c-------------------------------------------------------
Confidence                468999999999997532  1                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+++.++|++++++|+.|+|+++|+++|+|++++ |+|||+||..+..+  .++.++|++||+|+.+|||+||.||
T Consensus        93 ----~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~--~~~~~~Y~asKaav~~ltr~lA~El  165 (242)
T 4b79_A           93 ----EEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFG--SADRPAYSASKGAIVQLTRSLACEY  165 (242)
T ss_dssp             ----GGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSC--CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCC--CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence                2788999999999999999999999999998764 99999999999987  4789999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~  312 (406)
                      +++|||||+|+||+ ++|++.+......        ..|..|+.+|||||++++||+|+.++|+||+.+ +|||++.
T Consensus       166 a~~gIrVNaV~PG~-i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          166 AAERIRVNAIAPGW-IDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             GGGTEEEEEEEECS-BCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhcCeEEEEEEeCC-CCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECccHhh
Confidence            99999999999996 6776665543322        236678899999999999999999999999999 8888763

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.7e-52  Score=389.94  Aligned_cols=235  Identities=23%  Similarity=0.301  Sum_probs=203.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..        +..+++.+.+.++.++.+|+++++++++++
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~--------~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v   74 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG--------AFLDALAQRQPRATYLPVELQDDAQCRDAV   74 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH--------HHHHHHHHHCTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH--------HHHHHHHhcCCCEEEEEeecCCHHHHHHHH
Confidence            589999999999999999999999999999999999987752        345567777889999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+..... .                                                      
T Consensus        75 ~~~~~~~G~iDiLVNnAGi~~~~~-~------------------------------------------------------   99 (258)
T 4gkb_A           75 AQTIATFGRLDGLVNNAGVNDGIG-L------------------------------------------------------   99 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCC-T------------------------------------------------------
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCC-c------------------------------------------------------
Confidence            999999999999999999753221 2                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.++|+++|+++|+|++++ |+|||+||..+..+  .++..+|++||+|+.+|||++|.||
T Consensus       100 -----~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~--~~~~~~Y~asKaav~~ltr~lA~el  171 (258)
T 4gkb_A          100 -----DAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTG--QGNTSGYCASKGAQLALTREWAVAL  171 (258)
T ss_dssp             -----TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHC--CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccC--CCCchHHHHHHHHHHHHHHHHHHHh
Confidence                 778899999999999999999999999998765 99999999999877  4789999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC----C--------cccc-cccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG----S--------ADAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~----~--------~~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++|||||+|+||+ +.|++.+.....    +        ..|. .|+.+|||||++++||+|+.++|+||+.+ +|||+
T Consensus       172 a~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          172 REHGVRVNAVIPAE-VMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             GGGTCEEEEEEECS-BCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cccCeEEEEEecCC-CCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence            99999999999996 566544332111    0        1133 47889999999999999999999999999 88887


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      +
T Consensus       251 T  251 (258)
T 4gkb_A          251 T  251 (258)
T ss_dssp             T
T ss_pred             c
Confidence            5

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=6.7e-51  Score=381.56  Aligned_cols=235  Identities=19%  Similarity=0.228  Sum_probs=201.8

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.++++|+||++|||||++|||+++|++|+++|++|++++|+.++..                 .+..++++|+++++++
T Consensus         3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----------------~~~~~~~~Dv~~~~~v   65 (261)
T 4h15_A            3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-----------------PEELFVEADLTTKEGC   65 (261)
T ss_dssp             CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------------CTTTEEECCTTSHHHH
T ss_pred             chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-----------------CcEEEEEcCCCCHHHH
Confidence            34567899999999999999999999999999999999999865321                 2245788999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.++||+||+||||||+.....                                                    
T Consensus        66 ~~~~~~~~~~~G~iDilVnnAG~~~~~~----------------------------------------------------   93 (261)
T 4h15_A           66 AIVAEATRQRLGGVDVIVHMLGGSSAAG----------------------------------------------------   93 (261)
T ss_dssp             HHHHHHHHHHTSSCSEEEECCCCCCCCS----------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCccCC----------------------------------------------------
Confidence            9999999999999999999999764321                                                    


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                           .++.+++.++|++++++|+.++|+++|+++|+|++++.|+|||+||..+..+.+ .+...|++||+|+.+|+|+|
T Consensus        94 -----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~-~~~~~Y~asKaal~~lt~~l  167 (261)
T 4h15_A           94 -----GGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP-ESTTAYAAAKAALSTYSKAM  167 (261)
T ss_dssp             -----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-TTCHHHHHHHHHHHHHHHHH
T ss_pred             -----CCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC-CccHHHHHHHHHHHHHHHHH
Confidence                 123488999999999999999999999999999999999999999999987741 36789999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcC--------------------CCcccccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTG--------------------GSADAKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      |.||+++|||||+|+||+ ++|++......                    ....|..|+.+|||||++++||+|+.++|+
T Consensus       168 A~Ela~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~i  246 (261)
T 4h15_A          168 SKEVSPKGVRVVRVSPGW-IETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASI  246 (261)
T ss_dssp             HHHHGGGTEEEEEEEECC-BCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHhhhhCeEEEEEeCCC-cCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            999999999999999996 66665433210                    112366788999999999999999999999


Q ss_pred             cceEE-EehhHH
Q psy6113         301 TGQFL-IDDEVL  311 (406)
Q Consensus       301 tG~~i-~d~g~~  311 (406)
                      ||+.+ +|||++
T Consensus       247 tG~~i~VDGG~v  258 (261)
T 4h15_A          247 TGAEYTIDGGTV  258 (261)
T ss_dssp             CSCEEEESTTCS
T ss_pred             cCcEEEECCcCc
Confidence            99999 787764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.4e-50  Score=375.39  Aligned_cols=229  Identities=21%  Similarity=0.303  Sum_probs=197.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|++|||||++|||+++|++|+++|++|++++|+.++           .+++.+.+.++.++++|++|+++++++++++.
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~-----------~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~   70 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKR-----------SADFAKERPNLFYFHGDVADPLTLKKFVEYAM   70 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHTTCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHhcCCEEEEEecCCCHHHHHHHHHHHH
Confidence            4999999999999999999999999999999998542           34555667789999999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      ++||+||+||||||+....++.                                                          
T Consensus        71 ~~~g~iDiLVNNAG~~~~~~~~----------------------------------------------------------   92 (247)
T 3ged_A           71 EKLQRIDVLVNNACRGSKGILS----------------------------------------------------------   92 (247)
T ss_dssp             HHHSCCCEEEECCCCCCCCGGG----------------------------------------------------------
T ss_pred             HHcCCCCEEEECCCCCCCCCcc----------------------------------------------------------
Confidence            9999999999999987554433                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +++.++|++++++|+.|+|+++|+++|+|++++ |+|||+||..+..+  .++..+|++||+|+.+|||+||.||++ |
T Consensus        93 -~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~ela~-~  167 (247)
T 3ged_A           93 -SLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQS--EPDSEAYASAKGGIVALTHALAMSLGP-D  167 (247)
T ss_dssp             -TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHTT-T
T ss_pred             -cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccC--CCCCHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence             899999999999999999999999999999875 99999999999987  488999999999999999999999997 9


Q ss_pred             eEEEEecchhhhhHHHHHHhcCC--CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHHHHh
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGG--SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLKAQ  314 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~--~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~~~  314 (406)
                      ||||+|+||+ ++|++.+.....  ...|..|+.+|||||++++||+|+  +|+||+.+ +|||++...
T Consensus       168 IrVN~I~PG~-i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VDGG~s~r~  233 (247)
T 3ged_A          168 VLVNCIAPGW-INVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVDGGMSKRM  233 (247)
T ss_dssp             SEEEEEEECS-BCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTGGGCC
T ss_pred             CEEEEEecCc-CCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEECcCHHHhC
Confidence            9999999997 555443322211  123677889999999999999984  69999999 788776543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.7e-48  Score=377.97  Aligned_cols=273  Identities=65%  Similarity=1.039  Sum_probs=246.6

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .++.+|+||++|||||++|||+++|++|+++|++|++++|+.++.+++.+.+++..+++...+.++.++.+|++|+++++
T Consensus        38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence            45678999999999999999999999999999999999999999888888898999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|+||+||||||+....+..                                                   
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~---------------------------------------------------  146 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISLTNTL---------------------------------------------------  146 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCTT---------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcc---------------------------------------------------
Confidence            99999999999999999999987554433                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                              +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+.+++++..|++||+|+++|+++++
T Consensus       147 --------~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la  218 (346)
T 3kvo_A          147 --------DTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMA  218 (346)
T ss_dssp             --------TCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence                    889999999999999999999999999999998899999999999877555788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehhHHHHhcc-cccC
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI-DLEQ  320 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~~~~~~~-~~~~  320 (406)
                      .|++ +||+||+|+||+++.|++.+.+...  .+..+..+|+|+|++++||+++ ++++||++++|+|+++..++ |++.
T Consensus       219 ~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~--~~~~r~~~pedvA~~v~~L~s~-~~~itG~~ivdgg~~~~~g~~~~~~  294 (346)
T 3kvo_A          219 EEFK-GEIAVNALWPKTAIHTAAMDMLGGP--GIESQCRKVDIIADAAYSIFQK-PKSFTGNFVIDENILKEEGIENFDV  294 (346)
T ss_dssp             HHTT-TTCEEEEEECSBCBCCHHHHHHCC----CGGGCBCTHHHHHHHHHHHTS-CTTCCSCEEEHHHHHHHTTCCCGGG
T ss_pred             HHhc-CCcEEEEEeCCCccccHHHHhhccc--cccccCCCHHHHHHHHHHHHhc-CCCCCceEEECCcEehhceeecccc
Confidence            9999 9999999999976888887766544  3567788999999999999999 99999999999999999888 8888


Q ss_pred             ccccCCCCCCcceEEec
Q psy6113         321 YSYVPNGAAEGSWHIDL  337 (406)
Q Consensus       321 ~~~~~~~~~~g~w~~dl  337 (406)
                      |...+.....-.|+++-
T Consensus       295 y~~~~~~~~~~d~~~~~  311 (346)
T 3kvo_A          295 YAIKPGHPLQPDFFLDE  311 (346)
T ss_dssp             GBSSTTSCCCBCTTCC-
T ss_pred             cCcCCCCccCCccccCC
Confidence            98888776666677653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.1e-49  Score=373.22  Aligned_cols=241  Identities=17%  Similarity=0.171  Sum_probs=206.0

Q ss_pred             CcccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~~~~~v   80 (406)
                      |++|+||++|||||++  |||+++|++|+++|++|++++|+.+.       ++++.+++++.+ .++.++++|+++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERS-------RKELEKLLEQLNQPEAHLYQIDVQSDEEV   73 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGG-------HHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence            6789999999999865  99999999999999999999998765       345566666655 4789999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.++||+||+||||||+....+..                                                  
T Consensus        74 ~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~--------------------------------------------------  103 (256)
T 4fs3_A           74 INGFEQIGKDVGNIDGVYHSIAFANMEDLR--------------------------------------------------  103 (256)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCGGGGT--------------------------------------------------
T ss_pred             HHHHHHHHHHhCCCCEEEeccccccccccc--------------------------------------------------
Confidence            999999999999999999999986543322                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                           .++.+.+.++|..++++|+.+++.+++++.|+|++  +|+|||+||..+..+  .+++..|++||+|+.+|+|+|
T Consensus       104 -----~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~--~~~~~~Y~asKaal~~ltr~l  174 (256)
T 4fs3_A          104 -----GRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFA--VQNYNVMGVAKASLEANVKYL  174 (256)
T ss_dssp             -----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSC--CTTTHHHHHHHHHHHHHHHHH
T ss_pred             -----cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccC--cccchhhHHHHHHHHHHHHHH
Confidence                 12237889999999999999999999999998865  489999999999987  588999999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |.||+++|||||+|+||+ +.|++.+.....        ...|..|+.+|||||++++||+|+.++|+||+.| +|||+.
T Consensus       175 A~Ela~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          175 ALDLGPDNIRVNAISAGP-IRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             HHHHGGGTEEEEEEEECC-CCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCccCeEEEEEecCC-CCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence            999999999999999996 566544322211        1236678899999999999999999999999999 787765

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=9.3e-48  Score=363.74  Aligned_cols=260  Identities=57%  Similarity=0.888  Sum_probs=227.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+.++.+++.+.+++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            57899999999999999999999999999999999999998888777788888888888999999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|++|+||||||+....+..                                                      
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~------------------------------------------------------  107 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTL------------------------------------------------------  107 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcc------------------------------------------------------
Confidence            99999999999999999987544333                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.+++++..|++||+|+++|+++++.|+
T Consensus       108 -----~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  182 (274)
T 3e03_A          108 -----DTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEF  182 (274)
T ss_dssp             -----GSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence                 788999999999999999999999999999998899999999998876323678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehhHHHHhcc-cccCccc
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI-DLEQYSY  323 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~~~~~~~-~~~~~~~  323 (406)
                      +++|||||+|+||+++.|++.+....   .+..+..+|+|+|++++||+++.++++||++++|+|++...++ +.+.|..
T Consensus       183 ~~~gI~vn~v~PG~~v~T~~~~~~~~---~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~~g~~~~~~~~~~~~~~~  259 (274)
T 3e03_A          183 GPQGVAINALWPRTVIATDAINMLPG---VDAAACRRPEIMADAAHAVLTREAAGFHGQFLIDDEVLAQAGITDLSGYAV  259 (274)
T ss_dssp             GGGTCEEEEEECSBCBCC-------C---CCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEHHHHHHHTTCCCCGGGBS
T ss_pred             hhcCEEEEEEECCcccccchhhhccc---ccccccCCHHHHHHHHHHHhCccccccCCeEEEcCcchhhccccCcccCCC
Confidence            99999999999996577877644332   2345678999999999999999999999999999999988876 6666655


Q ss_pred             cCC
Q psy6113         324 VPN  326 (406)
Q Consensus       324 ~~~  326 (406)
                      .+.
T Consensus       260 ~~~  262 (274)
T 3e03_A          260 DPQ  262 (274)
T ss_dssp             STT
T ss_pred             Cch
Confidence            443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.9e-47  Score=359.81  Aligned_cols=262  Identities=54%  Similarity=0.903  Sum_probs=231.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|++|+++||||++|||+++|++|+++|++|++++|+.++.+++.+.+++..+++...+.++.++.+|++|+++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            45789999999999999999999999999999999999999888877788888888988899999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+....+..                                                     
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~-----------------------------------------------------  110 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIE-----------------------------------------------------  110 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTT-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcc-----------------------------------------------------
Confidence            999999999999999999987554433                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+. +++...|++||+|+++|+++++.|
T Consensus       111 ------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-~~~~~~Y~asKaal~~~~~~la~e  183 (285)
T 3sc4_A          111 ------EVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK-WLRPTPYMMAKYGMTLCALGIAEE  183 (285)
T ss_dssp             ------TSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-GSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-CCCCchHHHHHHHHHHHHHHHHHH
Confidence                  8899999999999999999999999999999888999999999988763 267799999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehhHHHHhcc-cccCcc
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI-DLEQYS  322 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~~~~~~~-~~~~~~  322 (406)
                      ++++|||||+|+||+++.|++.+...... .+..+..+|||+|++++||+++.+ ++||+++..+|.+...++ +...|.
T Consensus       184 ~~~~gI~vn~v~PG~~v~t~~~~~~~~~~-~~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~dgg~~~~g~~~~~~~~  261 (285)
T 3sc4_A          184 LRDAGIASNTLWPRTTVATAAVQNLLGGD-EAMARSRKPEVYADAAYVVLNKPS-SYTGNTLLCEDVLLESGVTDLSVYD  261 (285)
T ss_dssp             TGGGTCEEEEEECSSCBCCHHHHHHHTSC-CCCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEHHHHHHHHTCCCGGGGB
T ss_pred             hcccCcEEEEEeCCCccccHHHHhhcccc-ccccCCCCHHHHHHHHHHHhCCcc-cccceEEEEcCchhccCcccceeee
Confidence            99999999999999657777766654332 356778899999999999999988 999999977777777777 777776


Q ss_pred             ccCCC
Q psy6113         323 YVPNG  327 (406)
Q Consensus       323 ~~~~~  327 (406)
                      ..+..
T Consensus       262 ~~~~~  266 (285)
T 3sc4_A          262 CVPGS  266 (285)
T ss_dssp             SSTTS
T ss_pred             ecCcc
Confidence            66653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.5e-45  Score=346.81  Aligned_cols=239  Identities=22%  Similarity=0.231  Sum_probs=207.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCC-eeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGG-NCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~-~~~~~~~Dl~~~~~v~   81 (406)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++.. .+. ++.++.+|++|+++++
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~   75 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER-------LRAAESALRQRFPGARLFASVCDVLDALQVR   75 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHSTTCCEEEEECCTTCHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCceEEEEeCCCCCHHHHH
Confidence            357999999999999999999999999999999999998654       3345556655 334 5899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.+|++|+||||||+....+..                                                   
T Consensus        76 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~---------------------------------------------------  104 (265)
T 3lf2_A           76 AFAEACERTLGCASILVNNAGQGRVSTFA---------------------------------------------------  104 (265)
T ss_dssp             HHHHHHHHHHCSCSEEEECCCCCCCBCTT---------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcc---------------------------------------------------
Confidence            99999999999999999999986544433                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                              +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++
T Consensus       105 --------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la  174 (265)
T 3lf2_A          105 --------ETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP--EPHMVATSAARAGVKNLVRSMA  174 (265)
T ss_dssp             --------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC--CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC--CCCchhhHHHHHHHHHHHHHHH
Confidence                    889999999999999999999999999999988899999999999877  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC------------------cccccccCChhhHHHHHHHhhcCCCCCccce
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS------------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQ  303 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~  303 (406)
                      .|++++|||||+|+||+ +.|++.+......                  ..|..++.+|+|+|++++||+|+.++++||+
T Consensus       175 ~e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~  253 (265)
T 3lf2_A          175 FEFAPKGVRVNGILIGL-VESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGS  253 (265)
T ss_dssp             HHHGGGTEEEEEEEECS-BCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSE
T ss_pred             HHhcccCeEEEEEEeCc-CcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCC
Confidence            99999999999999996 6666655433210                  0355677899999999999999999999999


Q ss_pred             EE-EehhHH
Q psy6113         304 FL-IDDEVL  311 (406)
Q Consensus       304 ~i-~d~g~~  311 (406)
                      .+ +|||+.
T Consensus       254 ~i~vdGG~~  262 (265)
T 3lf2_A          254 HIDVSGGLS  262 (265)
T ss_dssp             EEEESSSCC
T ss_pred             EEEECCCCc
Confidence            99 777653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-45  Score=350.18  Aligned_cols=243  Identities=27%  Similarity=0.329  Sum_probs=205.1

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +|+++++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~   94 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTE-------VEEVADEIVGAGGQAIALEADVSDELQMRN   94 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHTTTTCCEEEEECCTTCHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            4678999999999999999999999999999999999998754       445666777778899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+.....                                                      
T Consensus        95 ~~~~~~~~~g~iD~lVnnAg~~~~~~------------------------------------------------------  120 (283)
T 3v8b_A           95 AVRDLVLKFGHLDIVVANAGINGVWA------------------------------------------------------  120 (283)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBC------------------------------------------------------
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCC------------------------------------------------------
Confidence            99999999999999999999864311                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                          ++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+....+.++...|++||+|+++|+++++.
T Consensus       121 ----~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~  196 (283)
T 3v8b_A          121 ----PIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLAL  196 (283)
T ss_dssp             ----CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ----chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence                1238899999999999999999999999999999988999999999988732357889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC-------------Ccccc--cccCChhhHHHHHHHhhcCCCCCccceEE-E
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG-------------SADAK--ATSRKPEIMADAAYYILSSNPPSLTGQFL-I  306 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------------~~~~~--~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~  306 (406)
                      |++++||+||+|+||+ +.|++.+.....             ...+.  .++.+|+|+|++++||+++.++++||+.+ +
T Consensus       197 e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~v  275 (283)
T 3v8b_A          197 ELGKHHIRVNAVCPGA-IETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWI  275 (283)
T ss_dssp             HTTTTTEEEEEEEECS-BSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HhCccCcEEEEEEeCC-CcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEE
Confidence            9999999999999996 566543221100             01123  66789999999999999999999999999 7


Q ss_pred             ehhHH
Q psy6113         307 DDEVL  311 (406)
Q Consensus       307 d~g~~  311 (406)
                      |||..
T Consensus       276 dGG~~  280 (283)
T 3v8b_A          276 DGGQG  280 (283)
T ss_dssp             STTHH
T ss_pred             CcCcc
Confidence            77764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.4e-45  Score=347.23  Aligned_cols=240  Identities=24%  Similarity=0.365  Sum_probs=209.0

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ++++|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++.+ .+.++.++.+|++|+++++
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~   86 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSE-------LDAARRALGEQFGTDVHTVAIDLAEPDAPA   86 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHHCCCEEEEECCTTSTTHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            4668999999999999999999999999999999999998664       3345555555 5788999999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+||||||+....+..                                                   
T Consensus        87 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~---------------------------------------------------  115 (266)
T 4egf_A           87 ELARRAAEAFGGLDVLVNNAGISHPQPVV---------------------------------------------------  115 (266)
T ss_dssp             HHHHHHHHHHTSCSEEEEECCCCCCCCGG---------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCChh---------------------------------------------------
Confidence            99999999999999999999987654433                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              +.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+..+  .+++..|++||+|+++|++++
T Consensus       116 --------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~l  185 (266)
T 4egf_A          116 --------DTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP--LPDHYAYCTSKAGLVMATKVL  185 (266)
T ss_dssp             --------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             --------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC--CCCChHHHHHHHHHHHHHHHH
Confidence                    788999999999999999999999999999876 689999999999877  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++|||||+|+||+ +.|++.+......        ..+..++.+|+|+|++++||+++.++++||+.+ +|+|+.
T Consensus       186 a~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          186 ARELGPHGIRANSVCPTV-VLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             HHHHGGGTEEEEEEEESC-BCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhhhCeEEEEEEeCC-CcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCcc
Confidence            999999999999999996 6666654432211        134567789999999999999999999999999 777754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-45  Score=344.80  Aligned_cols=240  Identities=23%  Similarity=0.356  Sum_probs=208.8

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCCChHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~~~~~v~   81 (406)
                      +|++|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+ .++.++.+|++|+++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~   76 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTAD-------IDACVADLDQLGSGKVIGVQTDVSDRAQCD   76 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTSSSCEEEEECCTTSHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhCCCcEEEEEcCCCCHHHHH
Confidence            5778999999999999999999999999999999999998764       345566676666 68999999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+||||||+....+..                                                   
T Consensus        77 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~---------------------------------------------------  105 (262)
T 3pk0_A           77 ALAGRAVEEFGGIDVVCANAGVFPDAPLA---------------------------------------------------  105 (262)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCTT---------------------------------------------------
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCChh---------------------------------------------------
Confidence            99999999999999999999987554433                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+. .+  .+++..|++||+|+++|++++
T Consensus       106 --------~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--~~~~~~Y~asK~a~~~l~~~l  175 (262)
T 3pk0_A          106 --------TMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG--YPGWSHYGATKAAQLGFMRTA  175 (262)
T ss_dssp             --------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             --------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--CCCChhhHHHHHHHHHHHHHH
Confidence                    8899999999999999999999999999999988999999999886 44  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++|||||+|+||+ +.|++.....+.      ...+..++.+|+|+|++++||+++.++++||+.+ +|||..
T Consensus       176 a~e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~  252 (262)
T 3pk0_A          176 AIELAPHKITVNAIMPGN-IMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQV  252 (262)
T ss_dssp             HHHHGGGTCEEEEEEECS-BCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHhhCcEEEEEEeCc-CcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            999999999999999996 566554322110      1135567889999999999999999999999999 777764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4.1e-45  Score=342.20  Aligned_cols=238  Identities=27%  Similarity=0.356  Sum_probs=209.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|+||+++||||++|||+++|++|+++|++|++++|+.++       .++..+++...+.++.++.+|++|+++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   79 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG-------AEAVAAAIRQAGGKAIGLECNVTDEQHREAV   79 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            567999999999999999999999999999999999998754       3456677777888999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+....+                                                       
T Consensus        80 ~~~~~~~~g~id~lv~nAg~~~~~~-------------------------------------------------------  104 (256)
T 3gaf_A           80 IKAALDQFGKITVLVNNAGGGGPKP-------------------------------------------------------  104 (256)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCC-------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999999764322                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          + +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       105 ----~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e  177 (256)
T 3gaf_A          105 ----F-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT--NVRMASYGSSKAAVNHLTRNIAFD  177 (256)
T ss_dssp             ----T-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----C-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC--CCCchHHHHHHHHHHHHHHHHHHH
Confidence                2 678899999999999999999999999999998899999999999877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++|||||+|+||+ +.|++.+.....       ...+..++.+|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       178 ~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          178 VGPMGIRVNAIAPGA-IKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             HGGGTEEEEEEEECC-BCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HhhhCcEEEEEEEcc-ccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcc
Confidence            999999999999996 566655433211       1235567889999999999999999999999999 777753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=3.8e-46  Score=347.61  Aligned_cols=238  Identities=24%  Similarity=0.340  Sum_probs=203.4

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.++++++||+++||||++|||+++|++|+++|++|++++|+.+++       ++..+++   +.+..++.+|++|++++
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~-------~~~~~~~---~~~~~~~~~Dv~d~~~v   70 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-------QAISDYL---GDNGKGMALNVTNPESI   70 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHHH---GGGEEEEECCTTCHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHh---cccceEEEEeCCCHHHH
Confidence            7788999999999999999999999999999999999999986542       2233333   34577899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+....+..                                                  
T Consensus        71 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~--------------------------------------------------  100 (248)
T 3op4_A           71 EAVLKAITDEFGGVDILVNNAGITRDNLLM--------------------------------------------------  100 (248)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCGG--------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChh--------------------------------------------------
Confidence            999999999999999999999987554332                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                               +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|++++
T Consensus       101 ---------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~l  169 (248)
T 3op4_A          101 ---------RMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG--NAGQANYAAAKAGVIGFTKSM  169 (248)
T ss_dssp             ---------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             ---------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC--CCCChHHHHHHHHHHHHHHHH
Confidence                     789999999999999999999999999999998899999999988876  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +.|++++|||||+|+||+ +.|++.+.....      ...+..++.+|+|+|++++||+++.++++||+.+ +|+|+
T Consensus       170 a~e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          170 AREVASRGVTVNTVAPGF-IETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHHGGGTEEEEEEEECS-BSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHhCeEEEEEeeCC-CCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            999999999999999996 566543221100      0124567789999999999999999999999999 77764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.9e-45  Score=342.71  Aligned_cols=236  Identities=29%  Similarity=0.416  Sum_probs=203.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|+||+++||||++|||+++|++|+++|++|++++|+.+++       ++..   ...+.++.++.+|++|+++++++
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~-------~~~~---~~~~~~~~~~~~Dv~~~~~v~~~   70 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGA-------KAAA---ASIGKKARAIAADISDPGSVKAL   70 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH-------HHHH---HHHCTTEEECCCCTTCHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHH---HHhCCceEEEEcCCCCHHHHHHH
Confidence            4679999999999999999999999999999999999986532       2222   33377899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+..                                                     
T Consensus        71 ~~~~~~~~g~id~lv~nAg~~~~~~~~-----------------------------------------------------   97 (247)
T 3rwb_A           71 FAEIQALTGGIDILVNNASIVPFVAWD-----------------------------------------------------   97 (247)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCcc-----------------------------------------------------
Confidence            999999999999999999987544332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus        98 ------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~  169 (247)
T 3rwb_A           98 ------DVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG--TPNMAAYVAAKGGVIGFTRALAT  169 (247)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC--CCCchhhHHHHHHHHHHHHHHHH
Confidence                  789999999999999999999999999999876 699999999988876  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++|||||+|+||+ +.|++.........       .+..+..+|+|+|++++||+++.++++||+.+ +|+|+.
T Consensus       170 e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          170 ELGKYNITANAVTPGL-IESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             HHGGGTEEEEEEEECS-BCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HhhhcCeEEEEEeeCc-CcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999999999999996 66666554322111       24456789999999999999999999999999 777754

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.8e-45  Score=346.24  Aligned_cols=239  Identities=23%  Similarity=0.310  Sum_probs=209.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   93 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR-------VAQTVQEFRNVGHDAEAVAFDVTSESEIIEA   93 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH-------HHHHHHHHHHTTCCEEECCCCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            468999999999999999999999999999999999998654       4456777777888999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+..                                                     
T Consensus        94 ~~~~~~~~g~iD~lv~nAg~~~~~~~~-----------------------------------------------------  120 (271)
T 4ibo_A           94 FARLDEQGIDVDILVNNAGIQFRKPMI-----------------------------------------------------  120 (271)
T ss_dssp             HHHHHHHTCCCCEEEECCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCch-----------------------------------------------------
Confidence            999999999999999999987554433                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus       121 ------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  192 (271)
T 4ibo_A          121 ------ELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA--RATVAPYTVAKGGIKMLTRAMAAE  192 (271)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence                  789999999999999999999999999999998899999999999877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++|||||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       193 ~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          193 WAQYGIQANAIGPGY-MLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             HGGGTEEEEEEEECS-BCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhhhCeEEEEEEecc-EeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCee
Confidence            999999999999996 555544332111        1134567889999999999999999999999999 777754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.4e-44  Score=343.89  Aligned_cols=246  Identities=25%  Similarity=0.346  Sum_probs=207.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC---------CCcccHHHHHHHHHHcCCeeeeeeecC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP---------KLPGTIYSAAKEVEDAGGNCLPCIVDI   74 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~---------~~~~~i~~~~~~~~~~g~~~~~~~~Dl   74 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+...         .-.+.+++..+++...+.++.++.+|+
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            45799999999999999999999999999999999999854321         112345556667777788999999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcc
Q psy6113          75 RDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGID  154 (406)
Q Consensus        75 ~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id  154 (406)
                      +|+++++++++++.+.+|++|+||||||+......                                             
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~---------------------------------------------  120 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDT---------------------------------------------  120 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSC---------------------------------------------
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCc---------------------------------------------
Confidence            99999999999999999999999999998654331                                             


Q ss_pred             eEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHH
Q psy6113         155 ILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGM  233 (406)
Q Consensus       155 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal  233 (406)
                                   +.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..+  .++...|++||+|+
T Consensus       121 -------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~  185 (286)
T 3uve_A          121 -------------LDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA--YPHTGHYVAAKHGV  185 (286)
T ss_dssp             -------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTCHHHHHHHHHH
T ss_pred             -------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC--CCCccHHHHHHHHH
Confidence                         13788999999999999999999999999999876 689999999999877  47889999999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhHHHHH------HhcC----------------CCcccccccCChhhHHHHHHH
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIE------MLTG----------------GSADAKATSRKPEIMADAAYY  291 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~------~~~~----------------~~~~~~~~~~~pe~vA~~v~~  291 (406)
                      ++|+++++.|++++|||||+|+||+ +.|++.+      ...+                ....+ .++.+|+|+|++++|
T Consensus       186 ~~~~~~la~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~f  263 (286)
T 3uve_A          186 VGLMRAFGVELGQHMIRVNSVHPTH-VKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLF  263 (286)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESS-BSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCc-ccCCcccccchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHH
Confidence            9999999999999999999999996 5554432      1111                00112 567899999999999


Q ss_pred             hhcCCCCCccceEE-EehhHH
Q psy6113         292 ILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       292 L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+|+.++++||+.+ +|||..
T Consensus       264 L~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          264 FASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HcCccccCCcCCEEeECCccc
Confidence            99999999999999 777753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=6.2e-45  Score=344.77  Aligned_cols=242  Identities=27%  Similarity=0.376  Sum_probs=208.9

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++++|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   98 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDA-------LQVVADEIAGVGGKALPIRCDVTQPDQVRG   98 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGG-------GHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            3568999999999999999999999999999999999998765       345677777788899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+++|++|+||||||+....+..                                                    
T Consensus        99 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~----------------------------------------------------  126 (276)
T 3r1i_A           99 MLDQMTGELGGIDIAVCNAGIVSVQAML----------------------------------------------------  126 (276)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcc----------------------------------------------------
Confidence            9999999999999999999987554433                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++. ++||++||..+..+...++...|++||+|+++|+++++
T Consensus       127 -------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la  199 (276)
T 3r1i_A          127 -------DMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMA  199 (276)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHH
Confidence                   7889999999999999999999999999998764 89999999988765422467899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC-----CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG-----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++|||||+|+||+ +.|++.+.....     ...+..++.+|+|+|++++||+++.++++||+.+ +|||++
T Consensus       200 ~e~~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          200 VELAPHQIRVNSVSPGY-IRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHGGGTEEEEEEEECC-BCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhhcCcEEEEEeeCC-CcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence            99999999999999996 566554332111     1124567889999999999999999999999999 777754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-44  Score=342.01  Aligned_cols=247  Identities=27%  Similarity=0.382  Sum_probs=207.8

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC-----CCcccHHHHHHHHHHcCCeeeeeeecCCCh
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP-----KLPGTIYSAAKEVEDAGGNCLPCIVDIRDE   77 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~-----~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~   77 (406)
                      +|.+|+||+++||||++|||+++|++|+++|++|++++|+.....     ...+.+++..+++...+.++.++.+|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            467899999999999999999999999999999999999854321     112334555666777788999999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      ++++++++++.+.+|++|+||||||+....+..                                               
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~-----------------------------------------------  116 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLP-----------------------------------------------  116 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTT-----------------------------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc-----------------------------------------------
Confidence            999999999999999999999999987554433                                               


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                                  +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+
T Consensus       117 ------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~  182 (281)
T 3s55_A          117 ------------EVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA--NFAQASYVSSKWGVIGLT  182 (281)
T ss_dssp             ------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHH
T ss_pred             ------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC--CCCCchhHHHHHHHHHHH
Confidence                        889999999999999999999999999999998899999999999877  478899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHH------hcC----CC-----------cccccccCChhhHHHHHHHhhcCC
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEM------LTG----GS-----------ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~------~~~----~~-----------~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++++.|++++|||||+|+||+ +.|++...      ..+    ..           .....++.+|+|+|++++||+++.
T Consensus       183 ~~la~e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~  261 (281)
T 3s55_A          183 KCAAHDLVGYGITVNAVAPGN-IETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEA  261 (281)
T ss_dssp             HHHHHHTGGGTEEEEEEEECS-BCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhcCcEEEEEecCc-ccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999996 55544311      000    00           001156779999999999999999


Q ss_pred             CCCccceEE-EehhHH
Q psy6113         297 PPSLTGQFL-IDDEVL  311 (406)
Q Consensus       297 ~~~~tG~~i-~d~g~~  311 (406)
                      ++++||+.+ +|+|..
T Consensus       262 ~~~itG~~i~vdgG~~  277 (281)
T 3s55_A          262 SSHITGTVLPIDAGAT  277 (281)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             ccCCCCCEEEECCCcc
Confidence            999999999 777764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-44  Score=342.83  Aligned_cols=246  Identities=26%  Similarity=0.412  Sum_probs=206.8

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC------CcccHHHHHHHHHHcCCeeeeeeecCCC
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK------LPGTIYSAAKEVEDAGGNCLPCIVDIRD   76 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~------~~~~i~~~~~~~~~~g~~~~~~~~Dl~~   76 (406)
                      .|.+|+||++|||||++|||+++|++|+++|++|++++|+.+....      -.+.+++..+++...+.++.++.+|++|
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            4678999999999999999999999999999999999996432211      1234556667777778899999999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceE
Q psy6113          77 EHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDIL  156 (406)
Q Consensus        77 ~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~l  156 (406)
                      +++++++++++.+++|++|+||||||+....+..                                              
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~----------------------------------------------  122 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVW----------------------------------------------  122 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGG----------------------------------------------
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc----------------------------------------------
Confidence            9999999999999999999999999987544332                                              


Q ss_pred             eccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHH
Q psy6113         157 VNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       157 i~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~  235 (406)
                                   +.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..+  .++...|++||+|+++
T Consensus       123 -------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~  187 (280)
T 3pgx_A          123 -------------ELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA--TPGNGHYSASKHGLTA  187 (280)
T ss_dssp             -------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHH
T ss_pred             -------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC--CCCchhHHHHHHHHHH
Confidence                         789999999999999999999999999999876 799999999999877  4788999999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHH------h---cC-------CCcccccccCChhhHHHHHHHhhcCCCCC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEM------L---TG-------GSADAKATSRKPEIMADAAYYILSSNPPS  299 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~------~---~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~  299 (406)
                      |+++++.|++++||+||+|+||+ +.|++.+.      .   ..       ....+ .++.+|+|+|++++||+++.+++
T Consensus       188 ~~~~la~e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~dvA~~v~~L~s~~~~~  265 (280)
T 3pgx_A          188 LTNTLAIELGEYGIRVNSIHPYS-VETPMIEPEAMMEIFARHPSFVHSFPPMPVQP-NGFMTADEVADVVAWLAGDGSGT  265 (280)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECS-BCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCc-ccCcccchhhhhhhhhcCchhhhhhhhcccCC-CCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999996 55543211      1   00       01112 25779999999999999999999


Q ss_pred             ccceEE-EehhHH
Q psy6113         300 LTGQFL-IDDEVL  311 (406)
Q Consensus       300 ~tG~~i-~d~g~~  311 (406)
                      +||+.+ +|+|..
T Consensus       266 itG~~i~vdGG~~  278 (280)
T 3pgx_A          266 LTGTQIPVDKGAL  278 (280)
T ss_dssp             CSSCEEEESTTGG
T ss_pred             CCCCEEEECCCcc
Confidence            999999 777754

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.8e-44  Score=344.40  Aligned_cols=239  Identities=23%  Similarity=0.344  Sum_probs=208.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~~~~~v~~   82 (406)
                      |.+|+||++|||||++|||+++|++|+++|++|++++|+.+++       ++..+++...+ .++.++.+|++|++++++
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~  108 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL-------SSVTAELGELGAGNVIGVRLDVSDPGSCAD  108 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-------HHHHHHHTTSSSSCEEEEECCTTCHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHHHhhCCCcEEEEEEeCCCHHHHHH
Confidence            6789999999999999999999999999999999999987653       34566666665 689999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+....+..                                                    
T Consensus       109 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~----------------------------------------------------  136 (293)
T 3rih_A          109 AARTVVDAFGALDVVCANAGIFPEARLD----------------------------------------------------  136 (293)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTT----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcc----------------------------------------------------
Confidence            9999999999999999999987554433                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+. .+  .+++..|++||+|+++|+++++
T Consensus       137 -------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~--~~~~~~Y~asKaa~~~l~~~la  207 (293)
T 3rih_A          137 -------TMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG--YPGWSHYGASKAAQLGFMRTAA  207 (293)
T ss_dssp             -------TCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC--CCCCHHHHHHHHHHHHHHHHHH
Confidence                   8899999999999999999999999999999988999999999886 44  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcC------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTG------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++||+||+|+||+ +.|++......      ....+..++.+|+|+|++++||+++.++++||+.+ +|||..
T Consensus       208 ~e~~~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  283 (293)
T 3rih_A          208 IELAPRGVTVNAILPGN-ILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQV  283 (293)
T ss_dssp             HHHGGGTCEEEEEEECS-BCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhhhCeEEEEEecCC-CcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999999999999996 55655433211      11235567889999999999999999999999999 777754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-44  Score=342.72  Aligned_cols=235  Identities=24%  Similarity=0.289  Sum_probs=205.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.++++       +..+++...+.++.++.+|+++++++++++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTA-------AVQQRIIASGGTAQELAGDLSEAGAGTDLI  101 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTH-------HHHHHHHHTTCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-------HHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Confidence            5789999999999999999999999999999999999887643       456677777889999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+. +++|+||||||+....+..                                                      
T Consensus       102 ~~~~~~-g~iD~lvnnAg~~~~~~~~------------------------------------------------------  126 (275)
T 4imr_A          102 ERAEAI-APVDILVINASAQINATLS------------------------------------------------------  126 (275)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCBCGG------------------------------------------------------
T ss_pred             HHHHHh-CCCCEEEECCCCCCCCCcc------------------------------------------------------
Confidence            999887 9999999999986544332                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|+
T Consensus       127 -----~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~  199 (275)
T 4imr_A          127 -----ALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP--KSVVTAYAATKAAQHNLIQSQARDF  199 (275)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC--CCCchhhHHHHHHHHHHHHHHHHHh
Confidence                 789999999999999999999999999999998899999999998876  4677889999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCCc----------ccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGSA----------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~~----------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +++||+||+|+||+ +.|++.........          .+..++.+|+|+|++++||+++.++++||+.+ +|||
T Consensus       200 ~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          200 AGDNVLLNTLAPGL-VDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             GGGTEEEEEEEESS-BCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             cccCcEEEEEEecc-ccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            99999999999996 56665543321110          14567789999999999999999999999999 7776

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-44  Score=342.33  Aligned_cols=235  Identities=28%  Similarity=0.422  Sum_probs=203.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+++       ++..   ...+.++.++.+|++|++++++++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-------~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~   94 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAA-------DAAA---TKIGCGAAACRVDVSDEQQIIAMV   94 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHH---HHHCSSCEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHH---HHcCCcceEEEecCCCHHHHHHHH
Confidence            578999999999999999999999999999999999986532       2222   233778899999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|+||||||+....+..                                                      
T Consensus        95 ~~~~~~~g~iD~lvnnAg~~~~~~~~------------------------------------------------------  120 (277)
T 3gvc_A           95 DACVAAFGGVDKLVANAGVVHLASLI------------------------------------------------------  120 (277)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCBCTT------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChh------------------------------------------------------
Confidence            99999999999999999987554433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|+
T Consensus       121 -----~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~  193 (277)
T 3gvc_A          121 -----DTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA--VGGTGAYGMSKAGIIQLSRITAAEL  193 (277)
T ss_dssp             -----TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC--CCCchhHHHHHHHHHHHHHHHHHHh
Confidence                 889999999999999999999999999999998999999999999877  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-C------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-S------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++.+..... .            ..+..++.+|+|+|++++||+++.++++||+.+ +|||.
T Consensus       194 ~~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  272 (277)
T 3gvc_A          194 RSSGIRSNTLLPAF-VDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGT  272 (277)
T ss_dssp             GGGTEEEEEEEECS-BCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccCeEEEEEeeCC-ccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcc
Confidence            99999999999996 666665543221 0            123456789999999999999999999999999 88776


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       273 ~  273 (277)
T 3gvc_A          273 I  273 (277)
T ss_dssp             G
T ss_pred             h
Confidence            5

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-44  Score=340.15  Aligned_cols=246  Identities=25%  Similarity=0.339  Sum_probs=206.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC------CCcccHHHHHHHHHHcCCeeeeeeecCCCh
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP------KLPGTIYSAAKEVEDAGGNCLPCIVDIRDE   77 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~------~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~   77 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+...      .-.+.+++..+++...+.++.++.+|++|+
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF   85 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            35799999999999999999999999999999999999643211      112345556667777788999999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      ++++++++++.+++|++|+||||||+....+..                                               
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~-----------------------------------------------  118 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWD-----------------------------------------------  118 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGG-----------------------------------------------
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChh-----------------------------------------------
Confidence            999999999999999999999999987554332                                               


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l  236 (406)
                                  +.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..+  .++...|++||+|+++|
T Consensus       119 ------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~  184 (277)
T 3tsc_A          119 ------------DITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM--QPFMIHYTASKHAVTGL  184 (277)
T ss_dssp             ------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CSSCHHHHHHHHHHHHH
T ss_pred             ------------hCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC--CCCchhhHHHHHHHHHH
Confidence                        789999999999999999999999999999876 689999999999877  47889999999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhHHHHHH---------hcCCC-------cccccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEM---------LTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~---------~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      +++++.|++++|||||+|+||+ +.|++.+.         .....       .....++.+|+|+|++++||+++.++++
T Consensus       185 ~~~la~e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~i  263 (277)
T 3tsc_A          185 ARAFAAELGKHSIRVNSVHPGP-VNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKV  263 (277)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESS-BSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhCccCeEEEEEEeCC-CcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999996 55544211         00000       0111357899999999999999999999


Q ss_pred             cceEE-EehhHH
Q psy6113         301 TGQFL-IDDEVL  311 (406)
Q Consensus       301 tG~~i-~d~g~~  311 (406)
                      ||+.+ +|+|.+
T Consensus       264 tG~~i~vdGG~~  275 (277)
T 3tsc_A          264 TAAQIPVDQGST  275 (277)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCCEEeeCCCcc
Confidence            99999 777764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=6.7e-45  Score=342.69  Aligned_cols=237  Identities=24%  Similarity=0.289  Sum_probs=197.8

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +|++|+||++|||||++|||+++|++|+++|++|++++|+.++          ..+.....+.++.++.+|++|++++++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~Dv~d~~~v~~   90 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDK----------LKEIAADLGKDVFVFSANLSDRKSIKQ   90 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHHHHHHHCSSEEEEECCTTSHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----------HHHHHHHhCCceEEEEeecCCHHHHHH
Confidence            4678999999999999999999999999999999999997653          122233457789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+....+..                                                    
T Consensus        91 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~----------------------------------------------------  118 (266)
T 3grp_A           91 LAEVAEREMEGIDILVNNAGITRDGLFV----------------------------------------------------  118 (266)
T ss_dssp             HHHHHHHHHTSCCEEEECCCCC-----C----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcc----------------------------------------------------
Confidence            9999999999999999999987544333                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus       119 -------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~  189 (266)
T 3grp_A          119 -------RMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG--NPGQTNYCAAKAGLIGFSKALAQ  189 (266)
T ss_dssp             -------CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC--CCCchhHHHHHHHHHHHHHHHHH
Confidence                   888999999999999999999999999999998899999999999877  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++|||||+|+||+ +.|++.+...+.      ...+..++.+|+|+|++++||+++.++++||+.+ +|+|+.
T Consensus       190 e~~~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          190 EIASRNITVNCIAPGF-IKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             HHGGGTEEEEEEEECS-BCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             HhhhhCcEEEEEeeCc-CCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            9999999999999996 666665432111      1235567889999999999999999999999999 777753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=5e-45  Score=344.30  Aligned_cols=238  Identities=25%  Similarity=0.340  Sum_probs=208.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+|++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+.++.++.+|++|+++++++
T Consensus        23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   95 (270)
T 3ftp_A           23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAG-------AEGIGAAFKQAGLEGRGAVLNVNDATAVDAL   95 (270)
T ss_dssp             CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEEeCCCHHHHHHH
Confidence            356899999999999999999999999999999999998654       3455667777788899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+.......                                                     
T Consensus        96 ~~~~~~~~g~iD~lvnnAg~~~~~~~~-----------------------------------------------------  122 (270)
T 3ftp_A           96 VESTLKEFGALNVLVNNAGITQDQLAM-----------------------------------------------------  122 (270)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTT-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcc-----------------------------------------------------
Confidence            999999999999999999987654433                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       123 ------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  194 (270)
T 3ftp_A          123 ------RMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG--NPGQVNYAAAKAGVAGMTRALARE  194 (270)
T ss_dssp             ------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence                  888999999999999999999999999999988999999999988876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+.....      ...+..++.+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       195 ~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          195 IGSRGITVNCVAPGF-IDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             HGGGTEEEEEEEECS-BCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HhhhCeEEEEEEeCC-CcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCc
Confidence            999999999999996 666665443211      1234567789999999999999999999999999 77764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2e-44  Score=340.74  Aligned_cols=240  Identities=26%  Similarity=0.369  Sum_probs=204.8

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.++++|+||++|||||++|||+++|++|+++|++|++++|+..        .++..+++...+.++.++.+|++|++++
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   94 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG--------VKEVADEIADGGGSAEAVVADLADLEGA   94 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH--------HHHHHHHHHTTTCEEEEEECCTTCHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH--------HHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            44567899999999999999999999999999999999997532        3456667777788999999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++ .+..+.++++|+||||||+....+..                                                  
T Consensus        95 ~~~-~~~~~~~g~iD~lv~nAg~~~~~~~~--------------------------------------------------  123 (273)
T 3uf0_A           95 ANV-AEELAATRRVDVLVNNAGIIARAPAE--------------------------------------------------  123 (273)
T ss_dssp             HHH-HHHHHHHSCCCEEEECCCCCCCCCGG--------------------------------------------------
T ss_pred             HHH-HHHHHhcCCCcEEEECCCCCCCCCch--------------------------------------------------
Confidence            999 44556679999999999987544333                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                               +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|++++
T Consensus       124 ---------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~l  192 (273)
T 3uf0_A          124 ---------EVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG--GRNVAAYAASKHAVVGLTRAL  192 (273)
T ss_dssp             ---------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CSSCHHHHHHHHHHHHHHHHH
T ss_pred             ---------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC--CCCChhHHHHHHHHHHHHHHH
Confidence                     789999999999999999999999999999998999999999999877  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++||+||+|+||+ +.|++........        ..+..++.+|+|+|++++||+++.++++||+.+ +|+|+.
T Consensus       193 a~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          193 ASEWAGRGVGVNALAPGY-VVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             HHHHGGGTEEEEEEEECS-BCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhhcCcEEEEEEeCC-CcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            999999999999999996 5554443332211        124567889999999999999999999999999 777754

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-44  Score=338.39  Aligned_cols=239  Identities=23%  Similarity=0.358  Sum_probs=206.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +..|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   78 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVER-------LEDVAKQVTDTGRRALSVGTDITDDAQVAHL   78 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            346899999999999999999999999999999999998654       4456777777888999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+.....                                                       
T Consensus        79 ~~~~~~~~g~id~lv~nAg~~~~~~-------------------------------------------------------  103 (264)
T 3ucx_A           79 VDETMKAYGRVDVVINNAFRVPSMK-------------------------------------------------------  103 (264)
T ss_dssp             HHHHHHHTSCCSEEEECCCSCCCCC-------------------------------------------------------
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999999753221                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+.+.++|++++++|+.++++++++++|+|++++ |+||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       104 ---~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e  177 (264)
T 3ucx_A          104 ---PFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS--QAKYGAYKMAKSALLAMSQTLATE  177 (264)
T ss_dssp             ---CGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC--CCccHHHHHHHHHHHHHHHHHHHH
Confidence               123788999999999999999999999999999876 99999999998877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC-----------------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG-----------------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~-----------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      ++++|||||+|+||+ +.|++.+....                 ....+..++.+|+|+|++++||+++.++++||+.+ 
T Consensus       178 ~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~  256 (264)
T 3ucx_A          178 LGEKGIRVNSVLPGY-IWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALD  256 (264)
T ss_dssp             HHTTTCEEEEEEESS-CBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hCccCeEEEEEecCc-cccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence            999999999999996 55555433210                 01235567889999999999999999999999999 


Q ss_pred             EehhHH
Q psy6113         306 IDDEVL  311 (406)
Q Consensus       306 ~d~g~~  311 (406)
                      +|+|.+
T Consensus       257 vdGG~~  262 (264)
T 3ucx_A          257 VNCGEY  262 (264)
T ss_dssp             ESTTSS
T ss_pred             ECCCcc
Confidence            777753

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.3e-44  Score=340.98  Aligned_cols=237  Identities=25%  Similarity=0.383  Sum_probs=204.0

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ..++|++|+++||||++|||+++|++|+++|++|++++|+.++          ..+.....+.++.++.+|++|++++++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~Dv~d~~~v~~   90 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDA----------AVRVANEIGSKAFGVRVDVSSAKDAES   90 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH----------HHHHHHHHCTTEEEEECCTTCHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----------HHHHHHHhCCceEEEEecCCCHHHHHH
Confidence            4578999999999999999999999999999999999998653          122223347789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+....+..                                                    
T Consensus        91 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~----------------------------------------------------  118 (277)
T 4dqx_A           91 MVEKTTAKWGRVDVLVNNAGFGTTGNVV----------------------------------------------------  118 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTT----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcc----------------------------------------------------
Confidence            9999999999999999999987554433                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       119 -------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  189 (277)
T 4dqx_A          119 -------TIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA--IADRTAYVASKGAISSLTRAMAM  189 (277)
T ss_dssp             -------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC--CCCChhHHHHHHHHHHHHHHHHH
Confidence                   889999999999999999999999999999988899999999999877  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHH-HHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAA-IEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~-~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |++++||+||+|+||+ +.|++ ........           ..+..++.+|+|+|++++||+++.++++||+++ +|+|
T Consensus       190 e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          190 DHAKEGIRVNAVAPGT-IDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             HHGGGTEEEEEEEECS-BCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HhhhcCeEEEEEeeCc-CcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            9999999999999996 56655 33222111           124466789999999999999999999999999 7777


Q ss_pred             HH
Q psy6113         310 VL  311 (406)
Q Consensus       310 ~~  311 (406)
                      ..
T Consensus       269 ~~  270 (277)
T 4dqx_A          269 SS  270 (277)
T ss_dssp             SS
T ss_pred             hh
Confidence            54

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.4e-44  Score=342.39  Aligned_cols=240  Identities=28%  Similarity=0.365  Sum_probs=205.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.++       ..+..+++. ..+.++.++.+|++|++++++
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   94 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPR-------VLTAARKLAGATGRRCLPLSMDVRAPPAVMA   94 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHH-------HHHHHHHHHHHHSSCEEEEECCTTCHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            456899999999999999999999999999999999998654       233444443 347789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+++|++|+||||||+....+..                                                    
T Consensus        95 ~~~~~~~~~g~id~lv~nAg~~~~~~~~----------------------------------------------------  122 (277)
T 4fc7_A           95 AVDQALKEFGRIDILINCAAGNFLCPAG----------------------------------------------------  122 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCcCCCCCCcc----------------------------------------------------
Confidence            9999999999999999999976543332                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       123 -------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  193 (277)
T 4fc7_A          123 -------ALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG--QALQVHAGSAKAAVDAMTRHLAV  193 (277)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC--CCCcHHHHHHHHHHHHHHHHHHH
Confidence                   788999999999999999999999999999888899999999988876  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++|||||+|+||++.+++.........        ..+..++.+|+|+|++++||+++.++++||+.+ +|||..
T Consensus       194 e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~  271 (277)
T 4fc7_A          194 EWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAW  271 (277)
T ss_dssp             HHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHH
T ss_pred             HhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcc
Confidence            999999999999999754443333322111        135567889999999999999999999999999 787765

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.9e-44  Score=343.98  Aligned_cols=246  Identities=27%  Similarity=0.384  Sum_probs=207.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC-----CCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP-----KLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~-----~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+...     .-.+.+++..+++...+.++.++.+|++|++
T Consensus        23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD  102 (299)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence            35789999999999999999999999999999999999854211     1123455667777788889999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.+|+||+||||||+......                                                 
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~-------------------------------------------------  133 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTR-------------------------------------------------  133 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCC-------------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCc-------------------------------------------------
Confidence            9999999999999999999999998754331                                                 


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                               +.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||..+..+  .++...|++||+|+++|+
T Consensus       134 ---------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~  202 (299)
T 3t7c_A          134 ---------LNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG--AENIGNYIASKHGLHGLM  202 (299)
T ss_dssp             ---------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHH
T ss_pred             ---------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC--CCCcchHHHHHHHHHHHH
Confidence                     23889999999999999999999999999998765 789999999999877  478899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHH------HhcCCC----------------cccccccCChhhHHHHHHHhhcC
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIE------MLTGGS----------------ADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~------~~~~~~----------------~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++++.|++++||+||+|+||+ +.|++..      .+....                ..+ .++.+|+|+|++++||+++
T Consensus       203 ~~la~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~  280 (299)
T 3t7c_A          203 RTMALELGPRNIRVNIVCPSS-VATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSD  280 (299)
T ss_dssp             HHHHHHHGGGTEEEEEEEESC-BSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHhcccCcEEEEEecCC-ccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999996 5554431      111100                011 4567999999999999999


Q ss_pred             CCCCccceEE-EehhHH
Q psy6113         296 NPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       296 ~~~~~tG~~i-~d~g~~  311 (406)
                      .++++||+.+ +|||..
T Consensus       281 ~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          281 DARYITGVSLPVDGGAL  297 (299)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             ccccCcCCEEeeCCCcc
Confidence            9999999999 777754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.2e-44  Score=339.44  Aligned_cols=235  Identities=25%  Similarity=0.350  Sum_probs=205.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +||++|||||++|||+++|++|+++|++|+++ +|+.+.       +++..+++...+.++.++.+|++|++++++++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKA-------ALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQ   75 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            68999999999999999999999999999997 776543       3456667777788999999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+++|++|+||||||+....+..                                                        
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~--------------------------------------------------------   99 (258)
T 3oid_A           76 IDETFGRLDVFVNNAASGVLRPVM--------------------------------------------------------   99 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGG--------------------------------------------------------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChh--------------------------------------------------------
Confidence            999999999999999976544333                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.|+++
T Consensus       100 ---~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~  174 (258)
T 3oid_A          100 ---ELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY--LENYTTVGVSKAALEALTRYLAVELSP  174 (258)
T ss_dssp             ---GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred             ---hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence               788999999999999999999999999999998899999999999877  478899999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +|||||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.++++||+.+ +|+|+.
T Consensus       175 ~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          175 KQIIVNAVSGGA-IDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             GTEEEEEEEECC-BCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred             cCcEEEEEeeCC-CcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCcc
Confidence            999999999996 566554332211        0124567889999999999999999999999999 777765

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=6.5e-44  Score=333.23  Aligned_cols=237  Identities=19%  Similarity=0.262  Sum_probs=204.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecC--CChHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDI--RDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl--~~~~~v   80 (406)
                      ..+|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+ .++.++.+|+  ++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   79 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEK-------LRQVASHINEETGRQPQWFILDLLTCTSENC   79 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHHSCCCEEEECCTTTCCHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhcCCCceEEEEecccCCHHHH
Confidence            356899999999999999999999999999999999998764       334555555544 3788999999  999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.+|++|+||||||+.....                                                    
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~----------------------------------------------------  107 (252)
T 3f1l_A           80 QQLAQRIAVNYPRLDGVLHNAGLLGDVC----------------------------------------------------  107 (252)
T ss_dssp             HHHHHHHHHHCSCCSEEEECCCCCCCCS----------------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCEEEECCccCCCCC----------------------------------------------------
Confidence            9999999999999999999999854321                                                    


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                            ++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|++++
T Consensus       108 ------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~l  179 (252)
T 3f1l_A          108 ------PMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG--RANWGAYAASKFATEGMMQVL  179 (252)
T ss_dssp             ------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             ------CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC--CCCCchhHHHHHHHHHHHHHH
Confidence                  123889999999999999999999999999999998999999999999877  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++ ||||+|+||+ +.|++.....+.  .+..++.+|+|+|++++||+++.++++||+++ +|+|..
T Consensus       180 a~e~~~~-irvn~v~PG~-v~t~~~~~~~~~--~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~  247 (252)
T 3f1l_A          180 ADEYQQR-LRVNCINPGG-TRTAMRASAFPT--EDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRK  247 (252)
T ss_dssp             HHHTTTT-CEEEEEECCS-BSSHHHHHHCTT--CCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC--
T ss_pred             HHHhcCC-cEEEEEecCc-ccCchhhhhCCc--cchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcC
Confidence            9999987 9999999996 667666554333  23456789999999999999999999999999 777654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-44  Score=340.21  Aligned_cols=242  Identities=24%  Similarity=0.312  Sum_probs=193.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.      .+++..+++...+.++.++.+|++|+++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   97 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAE------GVAPVIAELSGLGARVIFLRADLADLSSHQAT   97 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHH------HHHHHHHHHHHTTCCEEEEECCTTSGGGHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            457899999999999999999999999999999999974431      24456667777788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+.....                                                       
T Consensus        98 ~~~~~~~~g~iD~lvnnAg~~~~~~-------------------------------------------------------  122 (280)
T 4da9_A           98 VDAVVAEFGRIDCLVNNAGIASIVR-------------------------------------------------------  122 (280)
T ss_dssp             HHHHHHHHSCCCEEEEECC-------------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCccccCC-------------------------------------------------------
Confidence            9999999999999999999842111                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                        .++.+.+.++|++++++|+.|+++++++++|+|++++   .|+||++||..+..+  .++...|++||+|+++|++++
T Consensus       123 --~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~l  198 (280)
T 4da9_A          123 --DDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT--SPERLDYCMSKAGLAAFSQGL  198 (280)
T ss_dssp             --CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------CCHHHHHHHHHHHHHHHHH
T ss_pred             --CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC--CCCccHHHHHHHHHHHHHHHH
Confidence              1223789999999999999999999999999999876   689999999999877  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++||+||+|+||+ +.|++.+...+..       ..+..++.+|+|+|++++||+++.++++||+.+ +|||+.
T Consensus       199 a~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          199 ALRLAETGIAVFEVRPGI-IRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             HHHHTTTTEEEEEEEECC-BCC----------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCcEEEEEeecC-CcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            999999999999999996 6666654432211       235567789999999999999999999999999 777653

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-44  Score=341.57  Aligned_cols=241  Identities=28%  Similarity=0.386  Sum_probs=206.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA-------LAELTDEIAGGGGEAAALAGDVGDEALHEAL   75 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHH-------HHHHHHHHTTTTCCEEECCCCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            567999999999999999999999999999999999998754       3455666766788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+.....                                                       
T Consensus        76 ~~~~~~~~g~iD~lvnnAg~~~~~~-------------------------------------------------------  100 (280)
T 3tox_A           76 VELAVRRFGGLDTAFNNAGALGAMG-------------------------------------------------------  100 (280)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSCS-------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999999764321                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                         ++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+. .+  .++...|++||+|+++|+++++.
T Consensus       101 ---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  175 (280)
T 3tox_A          101 ---EISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG--FAGVAPYAASKAGLIGLVQALAV  175 (280)
T ss_dssp             ---CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC--CCCchhHHHHHHHHHHHHHHHHH
Confidence               1237889999999999999999999999999999988999999999887 44  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHH-hcCCC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEM-LTGGS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~-~~~~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++||+||+|+||+ +.|++... .....         ..+..++.+|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       176 e~~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  254 (280)
T 3tox_A          176 ELGARGIRVNALLPGG-TDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGAS  254 (280)
T ss_dssp             HHHTTTEEEEEEEECS-BSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhhhcCeEEEEEEECC-CCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcc
Confidence            9999999999999996 55654332 11111         124456789999999999999999999999999 787765


Q ss_pred             H
Q psy6113         312 K  312 (406)
Q Consensus       312 ~  312 (406)
                      .
T Consensus       255 ~  255 (280)
T 3tox_A          255 V  255 (280)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.8e-43  Score=341.21  Aligned_cols=246  Identities=25%  Similarity=0.362  Sum_probs=207.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC-----CCCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH-----PKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~-----~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      |.+|+||++|||||++|||+++|++|+++|++|++++|+....     ....+.+++..+++...+.++.++.+|++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            5678999999999999999999999999999999998874321     11133455566677777889999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.+|+||+||||||+....+..                                                
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~------------------------------------------------  152 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVV------------------------------------------------  152 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT------------------------------------------------
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc------------------------------------------------
Confidence            99999999999999999999999987554433                                                


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                                 +.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..+  .+++..|++||+|+++|+
T Consensus       153 -----------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~  219 (317)
T 3oec_A          153 -----------SLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG--APGQSHYAASKHGVQGLM  219 (317)
T ss_dssp             -----------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC--CTTBHHHHHHHHHHHHHH
T ss_pred             -----------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC--CCCCcchHHHHHHHHHHH
Confidence                       889999999999999999999999999998875 689999999999877  478899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHH------hcCCC---------------cccccccCChhhHHHHHHHhhcCC
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEM------LTGGS---------------ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~------~~~~~---------------~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++++.|++++||+||+|+||+ +.|++...      +.+..               .....++.+|+|||++++||+++.
T Consensus       220 ~~la~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~  298 (317)
T 3oec_A          220 LSLANEVGRHNIRVNSVNPGA-VNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDE  298 (317)
T ss_dssp             HHHHHHHGGGTEEEEEEEECS-BSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHhhcCeEEEEEecCc-ccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999996 56655421      11100               001145679999999999999999


Q ss_pred             CCCccceEE-EehhHH
Q psy6113         297 PPSLTGQFL-IDDEVL  311 (406)
Q Consensus       297 ~~~~tG~~i-~d~g~~  311 (406)
                      ++++||+.+ +|||..
T Consensus       299 a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          299 ARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             ccCCCCCEEEECcchh
Confidence            999999999 787764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-44  Score=339.08  Aligned_cols=240  Identities=26%  Similarity=0.368  Sum_probs=202.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +.+|.+|++|||||++|||+++|++|+++|++|++++|+...      .+++..+++... +.++.++.+|++|++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   93 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD------EIRTVTDEVAGLSSGTVLHHPADMTKPSEIAD   93 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHH------HHHHHHHHHHTTCSSCEEEECCCTTCHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChH------HHHHHHHHHhhccCCcEEEEeCCCCCHHHHHH
Confidence            568999999999999999999999999999999999995432      233445555554 6789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+++|++|+||||||+....+..                                                    
T Consensus        94 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~----------------------------------------------------  121 (281)
T 3v2h_A           94 MMAMVADRFGGADILVNNAGVQFVEKIE----------------------------------------------------  121 (281)
T ss_dssp             HHHHHHHHTSSCSEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCCCCcc----------------------------------------------------
Confidence            9999999999999999999986544332                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       122 -------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  192 (281)
T 3v2h_A          122 -------DFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA--SPFKSAYVAAKHGIMGLTKTVAL  192 (281)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC--CCCchHHHHHHHHHHHHHHHHHH
Confidence                   789999999999999999999999999999998999999999999877  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC------------------CcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG------------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      |++++||+||+|+||+ +.|++.+.....                  ...+..++.+|+|+|++++||+++.++++||+.
T Consensus       193 e~~~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~  271 (281)
T 3v2h_A          193 EVAESGVTVNSICPGY-VLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTH  271 (281)
T ss_dssp             HHGGGTEEEEEEEECS-BCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCE
T ss_pred             HhhhcCcEEEEEECCC-CcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcE
Confidence            9999999999999996 566554332110                  112456778999999999999999999999999


Q ss_pred             E-EehhHH
Q psy6113         305 L-IDDEVL  311 (406)
Q Consensus       305 i-~d~g~~  311 (406)
                      + +|+|+.
T Consensus       272 i~vdGG~~  279 (281)
T 3v2h_A          272 VSMDGGWT  279 (281)
T ss_dssp             EEESTTGG
T ss_pred             EEECCCcc
Confidence            9 787764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=8.2e-45  Score=341.35  Aligned_cols=242  Identities=20%  Similarity=0.240  Sum_probs=200.4

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.++++|+||++|||||++|||+++|++|+++|++|++++|+....    +.+++..+++...+.++.++.+|++|++++
T Consensus         3 ~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   78 (262)
T 3ksu_A            3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDS----DTANKLKDELEDQGAKVALYQSDLSNEEEV   78 (262)
T ss_dssp             -CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGH----HHHHHHHHHHHTTTCEEEEEECCCCSHHHH
T ss_pred             CccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCH----HHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            3457889999999999999999999999999999999998864331    124556667777788999999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+....+..                                                  
T Consensus        79 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~--------------------------------------------------  108 (262)
T 3ksu_A           79 AKLFDFAEKEFGKVDIAINTVGKVLKKPIV--------------------------------------------------  108 (262)
T ss_dssp             HHHHHHHHHHHCSEEEEEECCCCCCSSCGG--------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcc--------------------------------------------------
Confidence            999999999999999999999987654433                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                               +.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+|+++|++++
T Consensus       109 ---------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~l  175 (262)
T 3ksu_A          109 ---------ETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAY--TGFYSTYAGNKAPVEHYTRAA  175 (262)
T ss_dssp             ---------GCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHH--HCCCCC-----CHHHHHHHHH
T ss_pred             ---------cCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccC--CCCCchhHHHHHHHHHHHHHH
Confidence                     7889999999999999999999999999943  489999999988765  467889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++|||||+|+||+ +.|++........       ..+..++.+|+|+|++++||+++ ++++||+.+ +|||+.
T Consensus       176 a~e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~  252 (262)
T 3ksu_A          176 SKELMKQQISVNAIAPGP-MDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYT  252 (262)
T ss_dssp             HHHTTTTTCEEEEEEECC-CCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCC
T ss_pred             HHHHHHcCcEEEEEeeCC-CcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCcc
Confidence            999999999999999996 6776654422111       12445678999999999999999 899999999 777754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=4e-44  Score=339.68  Aligned_cols=235  Identities=27%  Similarity=0.325  Sum_probs=203.8

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN-------VSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999998654       4456677777788999999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+++|++|+||||||+....+..                                                        
T Consensus        95 ~~~~~g~id~lv~nAg~~~~~~~~--------------------------------------------------------  118 (279)
T 3sju_A           95 AVERFGPIGILVNSAGRNGGGETA--------------------------------------------------------  118 (279)
T ss_dssp             HHHHHCSCCEEEECCCCCCCSCGG--------------------------------------------------------
T ss_pred             HHHHcCCCcEEEECCCCCCCCChh--------------------------------------------------------
Confidence            999999999999999987554333                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhH--HhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLP--YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p--~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                         +.+.++|++++++|+.|+++++++++|  .|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|+
T Consensus       119 ---~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~  193 (279)
T 3sju_A          119 ---DLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG--VMYAAPYTASKHGVVGFTKSVGFEL  193 (279)
T ss_dssp             ---GCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ---hCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC--CCCChhHHHHHHHHHHHHHHHHHHH
Confidence               788999999999999999999999999  688888899999999999877  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-----------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-E
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-----------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-I  306 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-----------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~  306 (406)
                      +++||+||+|+||+ +.|++.+.....                 ...+..++.+|+|+|++++||+++.++++||+.+ +
T Consensus       194 ~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~v  272 (279)
T 3sju_A          194 AKTGITVNAVCPGY-VETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNV  272 (279)
T ss_dssp             GGGTEEEEEEEESS-BCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEE
T ss_pred             HhhCcEEEEEeeCc-ccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEE
Confidence            99999999999996 666665443110                 0124567789999999999999999999999999 7


Q ss_pred             ehhH
Q psy6113         307 DDEV  310 (406)
Q Consensus       307 d~g~  310 (406)
                      |||+
T Consensus       273 dGG~  276 (279)
T 3sju_A          273 CGGL  276 (279)
T ss_dssp             STTC
T ss_pred             CCCc
Confidence            7765

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.2e-44  Score=336.33  Aligned_cols=238  Identities=26%  Similarity=0.380  Sum_probs=202.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   74 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK-------LEEAKLEIEQFPGQILTVQMDVRNTDDIQKMI   74 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHCCSTTCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998764       34456666667788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|++|+||||||+....+..                                                      
T Consensus        75 ~~~~~~~g~id~lv~nAg~~~~~~~~------------------------------------------------------  100 (257)
T 3imf_A           75 EQIDEKFGRIDILINNAAGNFICPAE------------------------------------------------------  100 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChh------------------------------------------------------
Confidence            99999999999999999976544332                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHh-cCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK-SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +.+.++|++++++|+.++++++++++|+|.+ ++.|+||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       101 -----~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  173 (257)
T 3imf_A          101 -----DLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA--GPGVIHSAAAKAGVLAMTKTLAVE  173 (257)
T ss_dssp             -----GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC--CCCcHHHHHHHHHHHHHHHHHHHH
Confidence                 7899999999999999999999999999954 45799999999998877  478899999999999999999999


Q ss_pred             hc-CCCeEEEEecchhhhhHHHH-HH--hcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FK-GDNIAVNALWPRTAIYTAAI-EM--LTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~-~~gI~vn~v~PG~~~~t~~~-~~--~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++ ++|||||+|+||+ +.|++. ..  ....      ...+..++.+|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       174 ~~~~~gIrvn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  251 (257)
T 3imf_A          174 WGRKYGIRVNAIAPGP-IERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQH  251 (257)
T ss_dssp             HHHHHCCEEEEEEECC-BSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hccccCeEEEEEEECC-CcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcc
Confidence            97 7899999999996 444321 10  0000      1124567789999999999999999999999999 777754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.1e-43  Score=335.13  Aligned_cols=237  Identities=22%  Similarity=0.355  Sum_probs=202.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+...      ..++..+++...+.++.++.+|++|+++++++
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   86 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTK------DAEKVVSEIKALGSDAIAIKADIRQVPEIVKL   86 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            457999999999999999999999999999999998876542      23456677777888999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+....+..                                                     
T Consensus        87 ~~~~~~~~g~id~lvnnAg~~~~~~~~-----------------------------------------------------  113 (270)
T 3is3_A           87 FDQAVAHFGHLDIAVSNSGVVSFGHLK-----------------------------------------------------  113 (270)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcc-----------------------------------------------------
Confidence            999999999999999999987544332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCC-CCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPL-NLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~-~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|++++++|+.|+++++++++|+|++  .|+||++||.. +..+  .++...|++||+|+++|+++++.
T Consensus       114 ------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~--~~~~~~Y~asKaa~~~~~~~la~  183 (270)
T 3is3_A          114 ------DVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFS--VPKHSLYSGSKGAVDSFVRIFSK  183 (270)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCC--CCCCchhHHHHHHHHHHHHHHHH
Confidence                  7899999999999999999999999999977  58999999988 4444  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC------------------CcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG------------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      |++++|||||+|+||+ +.|++.+.....                  ...+..++.+|+|+|++++||+++.++++||+.
T Consensus       184 e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~  262 (270)
T 3is3_A          184 DCGDKKITVNAVAPGG-TVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKV  262 (270)
T ss_dssp             HHGGGTCEEEEEEECS-BCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HhcccCeEEEEEEeCC-ccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            9999999999999996 566555422100                  012456678999999999999999999999999


Q ss_pred             E-EehhH
Q psy6113         305 L-IDDEV  310 (406)
Q Consensus       305 i-~d~g~  310 (406)
                      + +|+|.
T Consensus       263 i~vdGG~  269 (270)
T 3is3_A          263 LTLDGGA  269 (270)
T ss_dssp             EEESTTC
T ss_pred             EEeCCCC
Confidence            9 77763

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.2e-44  Score=335.45  Aligned_cols=236  Identities=28%  Similarity=0.366  Sum_probs=196.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +.++||++|||||++|||+++|++|+++|++|++++++.+.      ..++..+++...+.++.++.+|++|++++++++
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   96 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAA------AAEEVAGKIEAAGGKALTAQADVSDPAAVRRLF   96 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            45789999999999999999999999999999998665432      234556677777889999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|+||||||+....+..                                                      
T Consensus        97 ~~~~~~~g~iD~lvnnAG~~~~~~~~------------------------------------------------------  122 (267)
T 3u5t_A           97 ATAEEAFGGVDVLVNNAGIMPLTTIA------------------------------------------------------  122 (267)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChh------------------------------------------------------
Confidence            99999999999999999987544333                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|+++++++++|+|+++  |+||++||..+..+  .+++..|++||+|+++|+++++.|+
T Consensus       123 -----~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~  193 (267)
T 3u5t_A          123 -----ETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG--GRIINMSTSQVGLL--HPSYGIYAAAKAGVEAMTHVLSKEL  193 (267)
T ss_dssp             -----GCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CeEEEEeChhhccC--CCCchHHHHHHHHHHHHHHHHHHHh
Confidence                 78899999999999999999999999999763  89999999887766  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++|||||+|+||+ +.|++.......       ...+..++.+|+|+|++++||+++.++++||+++ +|||+
T Consensus       194 ~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          194 RGRDITVNAVAPGP-TATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TTSCCEEEEEEECC-BC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             hhhCCEEEEEEECC-CcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            99999999999996 666654332111       1134567789999999999999999999999999 77764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.7e-44  Score=338.86  Aligned_cols=240  Identities=21%  Similarity=0.279  Sum_probs=205.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC---eeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG---NCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~---~~~~~~~Dl~~~~~v   80 (406)
                      +++|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.   ++.++.+|++|++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v   78 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDK-------LAGAVQELEALGANGGAIRYEPTDITNEDET   78 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTCCSSCEEEEEECCTTSHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHhCCCCceEEEEeCCCCCHHHH
Confidence            457899999999999999999999999999999999998764       3455667766655   899999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+.....                                                    
T Consensus        79 ~~~~~~~~~~~g~id~lv~nAg~~~~~~----------------------------------------------------  106 (281)
T 3svt_A           79 ARAVDAVTAWHGRLHGVVHCAGGSENIG----------------------------------------------------  106 (281)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCC----------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCC----------------------------------------------------
Confidence            9999999999999999999999743221                                                    


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                            ++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||..+..+  .++...|++||+|+++|++++
T Consensus       107 ------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~l  178 (281)
T 3svt_A          107 ------PITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT--HRWFGAYGVTKSAVDHLMQLA  178 (281)
T ss_dssp             ------CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC--CTTCTHHHHHHHHHHHHHHHH
T ss_pred             ------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC--CCCChhHHHHHHHHHHHHHHH
Confidence                  123788999999999999999999999999999998999999999988876  477889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++|||||+|+||+ +.|++.+......        ..+..++.+|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       179 a~e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~  257 (281)
T 3svt_A          179 ADELGASWVRVNSIRPGL-IRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQM  257 (281)
T ss_dssp             HHHHGGGTEEEEEEEECS-BCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhhhcCeEEEEEEeCc-CcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChh
Confidence            999999999999999996 5665544332111        124567789999999999999998999999999 777765

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=9.8e-44  Score=333.30  Aligned_cols=235  Identities=23%  Similarity=0.327  Sum_probs=200.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+.++          ..+.....+.++.++.+|++|+++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~D~~~~~~v~~~   72 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIER----------ARQAAAEIGPAAYAVQMDVTRQDSIDAA   72 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHHHHHHHCTTEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----------HHHHHHHhCCCceEEEeeCCCHHHHHHH
Confidence            567999999999999999999999999999999999997653          2222233466789999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+....+..                                                     
T Consensus        73 ~~~~~~~~g~id~lv~~Ag~~~~~~~~-----------------------------------------------------   99 (259)
T 4e6p_A           73 IAATVEHAGGLDILVNNAALFDLAPIV-----------------------------------------------------   99 (259)
T ss_dssp             HHHHHHHSSSCCEEEECCCCCCCBCGG-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcc-----------------------------------------------------
Confidence            999999999999999999986544332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       100 ------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~  171 (259)
T 4e6p_A          100 ------EITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG--EALVAIYCATKAAVISLTQSAGL  171 (259)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC--CCCChHHHHHHHHHHHHHHHHHH
Confidence                  788999999999999999999999999998876 789999999999877  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHh----------cCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEML----------TGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~----------~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      |++++||+||+|+||+ +.|++.+..          ...       ...+..++.+|+|+|++++||+++.++++||+.+
T Consensus       172 e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i  250 (259)
T 4e6p_A          172 DLIKHRINVNAIAPGV-VDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTY  250 (259)
T ss_dssp             HHGGGTEEEEEEEECC-BCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEE
T ss_pred             HhhhcCCEEEEEEECC-CccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEE
Confidence            9999999999999996 555443322          010       0124567889999999999999999999999999


Q ss_pred             -EehhH
Q psy6113         306 -IDDEV  310 (406)
Q Consensus       306 -~d~g~  310 (406)
                       +|+|.
T Consensus       251 ~vdgG~  256 (259)
T 4e6p_A          251 NVDGGN  256 (259)
T ss_dssp             EESTTS
T ss_pred             EECcCh
Confidence             77764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.2e-43  Score=328.42  Aligned_cols=236  Identities=23%  Similarity=0.340  Sum_probs=203.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +.+|+++||||++|||+++|++|+++|++|++++|+...      ..++..+++...+.++.++.+|++|++++++++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKE------KAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999998886532      23456677777788999999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+++|++|+||||||+....+..                                                        
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~--------------------------------------------------------   99 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGITRDNLLM--------------------------------------------------------   99 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTT--------------------------------------------------------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcc--------------------------------------------------------
Confidence            999999999999999987554433                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|+++
T Consensus       100 ---~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~  174 (246)
T 3osu_A          100 ---RMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG--NPGQANYVATKAGVIGLTKSAARELAS  174 (246)
T ss_dssp             ---TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ---cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC--CCCChHHHHHHHHHHHHHHHHHHHhcc
Confidence               889999999999999999999999999999998899999999988766  478899999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcC------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTG------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +||+||+|+||+ +.|++.+...+      ....+..++.+|+|+|++++||+++.++++||+.+ +|+|+
T Consensus       175 ~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          175 RGITVNAVAPGF-IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             GTEEEEEEEECS-BGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             cCeEEEEEEECC-CcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            999999999996 55543221110      01235567889999999999999999999999999 77764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3.4e-44  Score=338.39  Aligned_cols=238  Identities=24%  Similarity=0.341  Sum_probs=205.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+...      ..++..+++...+.++.++.+|++|++++++++
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~   97 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAG------AADEVVAAIAAAGGEAFAVKADVSQESEVEALF   97 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            57899999999999999999999999999999999885432      234556677777889999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|++|+||||||+....+..                                                      
T Consensus        98 ~~~~~~~g~id~lv~nAg~~~~~~~~------------------------------------------------------  123 (269)
T 4dmm_A           98 AAVIERWGRLDVLVNNAGITRDTLLL------------------------------------------------------  123 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcc------------------------------------------------------
Confidence            99999999999999999987544332                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.|+
T Consensus       124 -----~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~  196 (269)
T 4dmm_A          124 -----RMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG--NPGQANYSAAKAGVIGLTKTVAKEL  196 (269)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC--CCCchhHHHHHHHHHHHHHHHHHHH
Confidence                 788999999999999999999999999999988899999999988766  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcC---CCcccccccCChhhHHHHHHHhhcC-CCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTG---GSADAKATSRKPEIMADAAYYILSS-NPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~---~~~~~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++......   ....+..++.+|+|+|++++||+++ .++++||+.+ +|+|+
T Consensus       197 ~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          197 ASRGITVNAVAPGF-IATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             GGGTCEEEEEEECC-BTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTS
T ss_pred             hhhCcEEEEEEECC-CcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCe
Confidence            99999999999996 55543221110   1123556788999999999999997 7889999999 77764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-43  Score=330.08  Aligned_cols=236  Identities=25%  Similarity=0.373  Sum_probs=200.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+|+||+++||||++|||+++|++|+++|++|++++|+.+++       ++..++   .+.++.++.+|++|+++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~---~~~~~~~~~~Dv~~~~~v~~~   75 (271)
T 3tzq_B            6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDL-------AGAAAS---VGRGAVHHVVDLTNEVSVRAL   75 (271)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCH-------HHHHHH---HCTTCEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHHHH---hCCCeEEEECCCCCHHHHHHH
Confidence            4579999999999999999999999999999999999997752       223333   367889999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+......                                                      
T Consensus        76 ~~~~~~~~g~id~lv~nAg~~~~~~~------------------------------------------------------  101 (271)
T 3tzq_B           76 IDFTIDTFGRLDIVDNNAAHSDPADM------------------------------------------------------  101 (271)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCC------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCC------------------------------------------------------
Confidence            99999999999999999998633111                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus       102 ---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  176 (271)
T 3tzq_B          102 ---LVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA--YDMSTAYACTKAAIETLTRYVATQ  176 (271)
T ss_dssp             ---CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB--CSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC--CCCChHHHHHHHHHHHHHHHHHHH
Confidence               123788999999999999999999999999999998999999999999877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHH-HhcC------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIE-MLTG------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~-~~~~------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++++||+||+|+||+ +.|++.+ ....      ....+..++.+|+|+|++++||+++.++++||+.+ +|+|
T Consensus       177 ~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          177 YGRHGVRCNAIAPGL-VRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             HGGGTEEEEEEEECC-BCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhhcCEEEEEEEeCC-CcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            999999999999996 5554322 1100      01134567789999999999999999999999999 7777

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.6e-43  Score=331.85  Aligned_cols=229  Identities=21%  Similarity=0.322  Sum_probs=196.1

Q ss_pred             CCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           2 INTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         2 ~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .+|++|+||++|||||++|||+++|++|+++|++|++++|+.+...+                  ...+.+|+++.++++
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~------------------~~~~~~Dv~~~~~~~   82 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA------------------DLHLPGDLREAAYAD   82 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC------------------SEECCCCTTSHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh------------------hhccCcCCCCHHHHH
Confidence            35778999999999999999999999999999999999998776543                  133478999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.+|++|+||||||+....+..                                                   
T Consensus        83 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~---------------------------------------------------  111 (266)
T 3uxy_A           83 GLPGAVAAGLGRLDIVVNNAGVISRGRIT---------------------------------------------------  111 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCGG---------------------------------------------------
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChh---------------------------------------------------
Confidence            99999999999999999999987654333                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                              +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++
T Consensus       112 --------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la  181 (266)
T 3uxy_A          112 --------ETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP--GPGHALYCLTKAALASLTQCMG  181 (266)
T ss_dssp             --------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC--CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             --------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC--CCCChHHHHHHHHHHHHHHHHH
Confidence                    788999999999999999999999999999998899999999999877  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC-------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG-------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      .|++++||+||+|+||+ +.|++.+.....             ...+..++.+|+|+|++++||+++.++++||+++ +|
T Consensus       182 ~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  260 (266)
T 3uxy_A          182 MDHAPQGIRINAVCPNE-VNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVN  260 (266)
T ss_dssp             HHHGGGTEEEEEEEESS-BCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhhhcCcEEEEEeeCC-CcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence            99999999999999996 566654332110             1124567789999999999999999999999999 77


Q ss_pred             hhH
Q psy6113         308 DEV  310 (406)
Q Consensus       308 ~g~  310 (406)
                      +|.
T Consensus       261 GG~  263 (266)
T 3uxy_A          261 GGK  263 (266)
T ss_dssp             TTC
T ss_pred             cCE
Confidence            764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-43  Score=335.53  Aligned_cols=238  Identities=26%  Similarity=0.362  Sum_probs=202.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+...      ..++..+++...+.++.++.+|++|+++++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   99 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAE------RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQA   99 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999999999999999999776532      23456677777788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+..                                                     
T Consensus       100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~-----------------------------------------------------  126 (271)
T 3v2g_A          100 IRETVEALGGLDILVNSAGIWHSAPLE-----------------------------------------------------  126 (271)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChh-----------------------------------------------------
Confidence            999999999999999999987544333                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+..+. .+++..|++||+|+++|+++++.|
T Consensus       127 ------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~-~~~~~~Y~asKaa~~~l~~~la~e  197 (271)
T 3v2g_A          127 ------ETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVP-WPGISLYSASKAALAGLTKGLARD  197 (271)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCC-STTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCC-CCCchHHHHHHHHHHHHHHHHHHH
Confidence                  8899999999999999999999999999975  5899999997765542 478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-----CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ +.|++.......     ...+..++.+|+|+|++++||+++.++++||+.+ +|||+
T Consensus       198 ~~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          198 LGPRGITVNIVHPGS-TDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HGGGTCEEEEEEECS-BCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             hhhhCeEEEEEecCC-CcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            999999999999996 566442211100     0124456789999999999999999999999999 77775

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.5e-43  Score=328.31  Aligned_cols=242  Identities=25%  Similarity=0.367  Sum_probs=207.3

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.+.++|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~   73 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-------LNDCLTQWRSKGFKVEASVCDLSSRSER   73 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence            566678999999999999999999999999999999999998653       3345566666678899999999999999


Q ss_pred             HHHHHHHHHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          81 QSAVNAAVDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        81 ~~~~~~i~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      +++++++.+.+ +++|+||||||+....+.                                                  
T Consensus        74 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~--------------------------------------------------  103 (260)
T 2ae2_A           74 QELMNTVANHFHGKLNILVNNAGIVIYKEA--------------------------------------------------  103 (260)
T ss_dssp             HHHHHHHHHHTTTCCCEEEECCCCCCCCCG--------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCCCCCCh--------------------------------------------------
Confidence            99999999999 899999999998644332                                                  


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                               .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .++...|++||+++++|+++
T Consensus       104 ---------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~  172 (260)
T 2ae2_A          104 ---------KDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA--VPYEAVYGATKGAMDQLTRC  172 (260)
T ss_dssp             ---------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHH
T ss_pred             ---------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC--CCCcchHHHHHHHHHHHHHH
Confidence                     2788999999999999999999999999999988899999999988876  47789999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      ++.|++++||+||+|+||+ +.|++.+......           ..+..++.+|+|+|++++||+++.++++||+.+ +|
T Consensus       173 la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vd  251 (260)
T 2ae2_A          173 LAFEWAKDNIRVNGVGPGV-IATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVD  251 (260)
T ss_dssp             HHHHTGGGTEEEEEEEECS-BCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhhcCcEEEEEecCC-CCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEEC
Confidence            9999999999999999996 5666544322110           123456789999999999999988899999999 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      +|..
T Consensus       252 gG~~  255 (260)
T 2ae2_A          252 GGLM  255 (260)
T ss_dssp             TTGG
T ss_pred             CCcc
Confidence            7753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6e-43  Score=329.32  Aligned_cols=238  Identities=23%  Similarity=0.374  Sum_probs=202.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~   81 (406)
                      +.+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.++.+|++|+++++
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   80 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEG-------LEASKAAVLETAPDAEVLTTVADVSDEAQVE   80 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHCTTCCEEEEECCTTSHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhcCCceEEEEEccCCCHHHHH
Confidence            457899999999999999999999999999999999998654       33445555554  678899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccccccc-CCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISL-TDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      ++++++.+++|++|+||||||+... .+.                                                   
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~---------------------------------------------------  109 (267)
T 1iy8_A           81 AYVTATTERFGRIDGFFNNAGIEGKQNPT---------------------------------------------------  109 (267)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCBCG---------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCCc---------------------------------------------------
Confidence            9999999999999999999997643 222                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              .+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+  .++...|++||+++++|++++
T Consensus       110 --------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l  179 (267)
T 1iy8_A          110 --------ESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG--IGNQSGYAAAKHGVVGLTRNS  179 (267)
T ss_dssp             --------GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB--CSSBHHHHHHHHHHHHHHHHH
T ss_pred             --------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC--CCCCccHHHHHHHHHHHHHHH
Confidence                    2788999999999999999999999999999988899999999998876  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHh----cCCCc----------ccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEML----TGGSA----------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~----~~~~~----------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      +.|++++||+||+|+||+ +.|++.+..    .+...          .+..++.+|+|+|++++||+++.++++||+++ 
T Consensus       180 a~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~  258 (267)
T 1iy8_A          180 AVEYGRYGIRINAIAPGA-IWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVP  258 (267)
T ss_dssp             HHHHGGGTCEEEEEEECS-BCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHhcCeEEEEEEeCC-CcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEE
Confidence            999999999999999996 566654432    11111          13456779999999999999988899999999 


Q ss_pred             EehhH
Q psy6113         306 IDDEV  310 (406)
Q Consensus       306 ~d~g~  310 (406)
                      +|+|.
T Consensus       259 vdGG~  263 (267)
T 1iy8_A          259 IDGGQ  263 (267)
T ss_dssp             ESTTT
T ss_pred             ECCCc
Confidence            77764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=8.5e-44  Score=333.11  Aligned_cols=233  Identities=21%  Similarity=0.269  Sum_probs=197.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+   ..+.++.++.+|++|+++++++
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~-------~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~   72 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESN-------IARIRE---EFGPRVHALRSDIADLNEIAVL   72 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHH---HHGGGEEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHH---HhCCcceEEEccCCCHHHHHHH
Confidence            467999999999999999999999999999999999998653       222222   3366899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+..                                                     
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~-----------------------------------------------------   99 (255)
T 4eso_A           73 GAAAGQTLGAIDLLHINAGVSELEPFD-----------------------------------------------------   99 (255)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCCCBCGG-----------------------------------------------------
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChh-----------------------------------------------------
Confidence            999999999999999999986544332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.++++++++++|+|+++  |+||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       100 ------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e  169 (255)
T 4eso_A          100 ------QVSEASYDRQFAVNTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGG--HPGMSVYSASKAALVSFASVLAAE  169 (255)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCGGGSSB--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC--CEEEEECChhhcCC--CCCchHHHHHHHHHHHHHHHHHHH
Confidence                  78999999999999999999999999999763  89999999999877  478999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC------------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG------------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ +.|++.+....            ....+..++.+|+|+|++++||+++ ++++||+.+ +|||.
T Consensus       170 ~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGG~  247 (255)
T 4eso_A          170 LLPRGIRVNSVSPGF-IDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTGAKLAVDGGL  247 (255)
T ss_dssp             TGGGTCEEEEEEECS-BCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCCSCEEEESTTT
T ss_pred             HhhhCcEEEEEecCc-ccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCccCCEEEECCCc
Confidence            999999999999996 55543211000            0012456778999999999999998 899999999 77776


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       248 ~  248 (255)
T 4eso_A          248 G  248 (255)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=3.1e-43  Score=331.37  Aligned_cols=235  Identities=23%  Similarity=0.367  Sum_probs=199.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~   81 (406)
                      +++|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +..+.++.+|++++++++
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   77 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREEN-------VNETIKEIRAQYPDAILQPVVADLGTEQGCQ   77 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHHCTTCEEEEEECCTTSHHHHH
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhCCCceEEEEecCCCCHHHHH
Confidence            357899999999999999999999999999999999998764       33455666554  457888999999999887


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      +++    ++++++|+||||||+....+..                                                   
T Consensus        78 ~~~----~~~g~id~lv~nAg~~~~~~~~---------------------------------------------------  102 (267)
T 3t4x_A           78 DVI----EKYPKVDILINNLGIFEPVEYF---------------------------------------------------  102 (267)
T ss_dssp             HHH----HHCCCCSEEEECCCCCCCCCGG---------------------------------------------------
T ss_pred             HHH----HhcCCCCEEEECCCCCCCCccc---------------------------------------------------
Confidence            765    4679999999999987554433                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                              +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++
T Consensus       103 --------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la  172 (267)
T 3t4x_A          103 --------DIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP--SQEMAHYSATKTMQLSLSRSLA  172 (267)
T ss_dssp             --------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC--CCcchHHHHHHHHHHHHHHHHH
Confidence                    788999999999999999999999999999988899999999999877  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhc----CC-----------------CcccccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLT----GG-----------------SADAKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~----~~-----------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      .|++++|||||+|+||+ +.|++.+...    +.                 +..+..++.+|+|+|++++||+++.++++
T Consensus       173 ~e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~i  251 (267)
T 3t4x_A          173 ELTTGTNVTVNTIMPGS-TLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAI  251 (267)
T ss_dssp             HHTTTSEEEEEEEEECC-BCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTC
T ss_pred             HHhCCCCeEEEEEeCCe-ecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCc
Confidence            99999999999999996 5555443221    00                 01234678899999999999999999999


Q ss_pred             cceEE-EehhHH
Q psy6113         301 TGQFL-IDDEVL  311 (406)
Q Consensus       301 tG~~i-~d~g~~  311 (406)
                      ||+.+ +|+|+.
T Consensus       252 tG~~i~vdGG~~  263 (267)
T 3t4x_A          252 NGSALRIDGGLV  263 (267)
T ss_dssp             CSCEEEESTTCS
T ss_pred             cCCeEEECCCcc
Confidence            99999 777754

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-43  Score=329.94  Aligned_cols=236  Identities=24%  Similarity=0.294  Sum_probs=202.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   75 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREA-------LEKAEASVREKGVEARSYVCDVTSEEAVIGTV   75 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998653       33455666666778999999999999999999


Q ss_pred             HHHHHhcCCccEEEeccccc-ccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+.+|++|+||||||+. ...+.                                                      
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~------------------------------------------------------  101 (262)
T 1zem_A           76 DSVVRDFGKIDFLFNNAGYQGAFAPV------------------------------------------------------  101 (262)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCG------------------------------------------------------
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcc------------------------------------------------------
Confidence            99999999999999999976 32222                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .++...|++||+++++|+++++.|
T Consensus       102 -----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  174 (262)
T 1zem_A          102 -----QDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG--PPNMAAYGTSKGAIIALTETAALD  174 (262)
T ss_dssp             -----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC--CCCCchHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999988899999999988766  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHh------------cC-CC---------cccccccCChhhHHHHHHHhhcCCCCCcc
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEML------------TG-GS---------ADAKATSRKPEIMADAAYYILSSNPPSLT  301 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~------------~~-~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~t  301 (406)
                      ++++|||||+|+||+ +.|++....            .. ..         ..|..++.+|+|+|++++||+++.++++|
T Consensus       175 ~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~it  253 (262)
T 1zem_A          175 LAPYNIRVNAISPGY-MGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMT  253 (262)
T ss_dssp             HGGGTEEEEEEEECS-BCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCC
T ss_pred             HHhhCeEEEEEecCC-cCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence            999999999999996 566554432            11 00         12445678999999999999999899999


Q ss_pred             ceEE-Eehh
Q psy6113         302 GQFL-IDDE  309 (406)
Q Consensus       302 G~~i-~d~g  309 (406)
                      |+.+ +|||
T Consensus       254 G~~i~vdGG  262 (262)
T 1zem_A          254 GVNLPIAGG  262 (262)
T ss_dssp             SCEEEESCC
T ss_pred             CcEEecCCC
Confidence            9999 6654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-42  Score=328.59  Aligned_cols=238  Identities=24%  Similarity=0.342  Sum_probs=201.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   89 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE-------LDECLEIWREKGLNVEGSVCDLLSRTERDKLM   89 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998653       33455666666778999999999999999999


Q ss_pred             HHHHHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+.+ +++|+||||||+....+.                                                      
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~------------------------------------------------------  115 (273)
T 1ae1_A           90 QTVAHVFDGKLNILVNNAGVVIHKEA------------------------------------------------------  115 (273)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCT------------------------------------------------------
T ss_pred             HHHHHHcCCCCcEEEECCCCCCCCCh------------------------------------------------------
Confidence            9999999 999999999998654333                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus       116 -----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  188 (273)
T 1ae1_A          116 -----KDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA--LPSVSLYSASKGAINQMTKSLACE  188 (273)
T ss_dssp             -----TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC--CCCcchhHHHHHHHHHHHHHHHHH
Confidence                 3788999999999999999999999999999888899999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC----CC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG----GS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~----~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+....    ..        ..+..++.+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       189 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          189 WAKDNIRVNSVAPGV-ILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGF  267 (273)
T ss_dssp             HGGGTEEEEEEEECS-BC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HhhcCcEEEEEEeCC-CcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCc
Confidence            999999999999996 66665433211    00        013456789999999999999998899999999 77775


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       268 ~  268 (273)
T 1ae1_A          268 T  268 (273)
T ss_dssp             G
T ss_pred             c
Confidence            4

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-42  Score=323.72  Aligned_cols=234  Identities=26%  Similarity=0.361  Sum_probs=196.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC-CCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA-EPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~-~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+|++|+++||||++|||+++|++|+++|++|++++|+. ++          ..+++...+.++.++.+|++|+++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE----------AEAAIRNLGRRVLTVKCDVSQPGDVEAF   72 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH----------HHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhH----------HHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            468999999999999999999999999999999999986 32          2224555677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+.                                                      
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~------------------------------------------------------   98 (249)
T 2ew8_A           73 GKQVISTFGRCDILVNNAGIYPLIPF------------------------------------------------------   98 (249)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCG------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCc------------------------------------------------------
Confidence            99999999999999999998654332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|
T Consensus        99 -----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  171 (249)
T 2ew8_A           99 -----DELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK--IEAYTHYISTKAANIGFTRALASD  171 (249)
T ss_dssp             -----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC--CSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999988899999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHH-Hhc-C--CC-c---ccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIE-MLT-G--GS-A---DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~-~~~-~--~~-~---~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+ ... .  .. .   .+..++.+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       172 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          172 LGKDGITVNAIAPSL-VRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HGGGTEEEEEEEECC-C------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHhcCcEEEEEecCc-CcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            999999999999996 6666544 221 1  10 0   24456789999999999999988899999999 77764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=3e-43  Score=330.12  Aligned_cols=238  Identities=27%  Similarity=0.367  Sum_probs=195.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++|+||+++||||++|||+++|++|+++|++|++++++.+.      ..++..+++...+.++.++.+|++|+++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   76 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAE------GAATAVAEIEKLGRSALAIKADLTNAAEVEAA   76 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCH------HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            467999999999999999999999999999999998554432      23455667777788899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+.....                                                       
T Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~-------------------------------------------------------  101 (259)
T 3edm_A           77 ISAAADKFGEIHGLVHVAGGLIARK-------------------------------------------------------  101 (259)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCCCC-------------------------------------------------------
T ss_pred             HHHHHHHhCCCCEEEECCCccCCCC-------------------------------------------------------
Confidence            9999999999999999999763221                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                         ++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+. .+  .++...|++||+|+++|+++++.
T Consensus       102 ---~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  174 (259)
T 3edm_A          102 ---TIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGG--GPGALAYATSKGAVMTFTRGLAK  174 (259)
T ss_dssp             ---CTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCC--STTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCC--CCCcHHHHHHHHHHHHHHHHHHH
Confidence               2238899999999999999999999999999976  4899999998877 44  47789999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+++. ||||+|+||+ +.|++.+.....       ...+..++.+|+|+|++++||+++.++++||+++ +|||..
T Consensus       175 e~~~~-I~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          175 EVGPK-IRVNAVCPGM-ISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             HHTTT-CEEEEEEECC-BCC----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred             HHCCC-CEEEEEEECC-CcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcC
Confidence            99987 9999999996 666665443211       1124567789999999999999999999999999 777754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=8e-43  Score=330.30  Aligned_cols=243  Identities=29%  Similarity=0.409  Sum_probs=201.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC-----CCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP-----KLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~-----~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+...     ...+.+++..+++...+.++.++.+|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            56799999999999999999999999999999999999843211     1123455566667777889999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.+|++|+||||||+...                                                    
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~----------------------------------------------------  115 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPM----------------------------------------------------  115 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCC----------------------------------------------------
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC----------------------------------------------------
Confidence            9999999999999999999999997532                                                    


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCC--ccCCchhhhHhhHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPF--WFKNHVAYTISKYGMSM  235 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~--~~~~~~~Y~asKaal~~  235 (406)
                                 ..+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..+.  ..++...|++||+|+++
T Consensus       116 -----------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~  184 (278)
T 3sx2_A          116 -----------SAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG  184 (278)
T ss_dssp             -----------SSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             -----------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHH
Confidence                       224788999999999999999999999999875 6899999999887652  11567889999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHH------------hcC-----CCcccccccCChhhHHHHHHHhhcCCCC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEM------------LTG-----GSADAKATSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~------------~~~-----~~~~~~~~~~~pe~vA~~v~~L~s~~~~  298 (406)
                      |+++++.|++++||+||+|+||+ +.|++.+.            ...     ....+ .++.+|+|+|++++||+++.++
T Consensus       185 ~~~~la~e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~  262 (278)
T 3sx2_A          185 LMRVYANLLAGQMIRVNSIHPSG-VETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQAR  262 (278)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESC-BSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHhccCcEEEEEecCC-ccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999996 55543210            000     01112 5677999999999999999999


Q ss_pred             CccceEE-EehhHH
Q psy6113         299 SLTGQFL-IDDEVL  311 (406)
Q Consensus       299 ~~tG~~i-~d~g~~  311 (406)
                      ++||+.+ +|+|++
T Consensus       263 ~itG~~i~vdGG~~  276 (278)
T 3sx2_A          263 YITGVTLPVDAGFL  276 (278)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             cccCCEEeECCCcc
Confidence            9999999 787764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-42  Score=327.17  Aligned_cols=231  Identities=28%  Similarity=0.419  Sum_probs=194.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   74 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQAR-------IEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA   74 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            568999999999999999999999999999999998764       4456777777888999999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.+|++|+||||||+....+..                                                        
T Consensus        75 ~~~~~g~iD~lVnnAG~~~~~~~~--------------------------------------------------------   98 (264)
T 3tfo_A           75 AVDTWGRIDVLVNNAGVMPLSPLA--------------------------------------------------------   98 (264)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGG--------------------------------------------------------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcc--------------------------------------------------------
Confidence            999999999999999986544332                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|+ +
T Consensus        99 ---~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~-~  172 (264)
T 3tfo_A           99 ---AVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV--VPTAAVYCATKFAVRAISDGLRQES-T  172 (264)
T ss_dssp             ---GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHC-S
T ss_pred             ---cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc--CCCChhHHHHHHHHHHHHHHHHHhC-C
Confidence               889999999999999999999999999999998899999999999877  4788999999999999999999998 5


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCCcc-----cccccCChhhHHHHHHHhhcCCCCCccceEEEeh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGSAD-----AKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD  308 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~~~-----~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~  308 (406)
                       |||||+|+||+ +.|++..........     ......+|+|+|++++||+++.+.+.+|+.++..
T Consensus       173 -gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p  237 (264)
T 3tfo_A          173 -NIRVTCVNPGV-VESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQSVDTTEITIRP  237 (264)
T ss_dssp             -SEEEEEEEECC-C-----------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEEE
T ss_pred             -CCEEEEEecCC-CcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCccCccceEEEec
Confidence             99999999996 677665543322111     1122478999999999999999999999988444

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-43  Score=328.50  Aligned_cols=237  Identities=20%  Similarity=0.230  Sum_probs=190.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++++||+++||||++|||+++|++|+++|++|++++|+.++.++.       .++   .+.++.++.+|++|+++++++
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~---~~~~~~~~~~Dv~~~~~v~~~   71 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEP-------AAE---LGAAVRFRNADVTNEADATAA   71 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH-------HHH---hCCceEEEEccCCCHHHHHHH
Confidence            4679999999999999999999999999999999999998865542       222   256788999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+.......                                                     
T Consensus        72 ~~~~~~~~g~id~lv~nAg~~~~~~~~-----------------------------------------------------   98 (257)
T 3tpc_A           72 LAFAKQEFGHVHGLVNCAGTAPGEKIL-----------------------------------------------------   98 (257)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSE-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCccc-----------------------------------------------------
Confidence            999999999999999999987544322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                        .+..+.+.++|++++++|+.|+++++++++|+|+++      +.|+||++||..+..+  .+++..|++||+|+++|+
T Consensus        99 --~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~  174 (257)
T 3tpc_A           99 --GRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG--QIGQAAYAASKGGVAALT  174 (257)
T ss_dssp             --ETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHH
T ss_pred             --cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC--CCCCcchHHHHHHHHHHH
Confidence              011257789999999999999999999999999985      5789999999998876  478899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccc-cccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++++.|++++||+||+|+||+ +.|++.+...+..      ..+. .++.+|+|+|++++||+++  +++||+.+ +|||
T Consensus       175 ~~la~e~~~~gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG  251 (257)
T 3tpc_A          175 LPAARELARFGIRVVTIAPGI-FDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN--TMLNGEVIRLDGA  251 (257)
T ss_dssp             HHHHHHHGGGTEEEEEEEECC-BSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCeEEEEEEeCC-CCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc--CCcCCcEEEECCC
Confidence            999999999999999999996 5665544332211      1233 6788999999999999985  79999999 7776


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      .
T Consensus       252 ~  252 (257)
T 3tpc_A          252 L  252 (257)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.4e-42  Score=331.58  Aligned_cols=239  Identities=23%  Similarity=0.331  Sum_probs=203.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+.+.     +..++..+++...+.++.++.+|++|+++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  118 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEE-----EDAQQVKALIEECGRKAVLLPGDLSDESFARSL  118 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGH-----HHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch-----hHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHH
Confidence            467899999999999999999999999999999999987431     113345556667788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+......                                                      
T Consensus       119 ~~~~~~~~g~iD~lv~nAg~~~~~~~------------------------------------------------------  144 (294)
T 3r3s_A          119 VHKAREALGGLDILALVAGKQTAIPE------------------------------------------------------  144 (294)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCCSS------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCCCC------------------------------------------------------
Confidence            99999999999999999997643221                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          +.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus       145 ----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  216 (294)
T 3r3s_A          145 ----IKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQP--SPHLLDYAATKAAILNYSRGLAKQ  216 (294)
T ss_dssp             ----GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccC--CCCchHHHHHHHHHHHHHHHHHHH
Confidence                237899999999999999999999999999965  389999999999877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++......        ....+..++.+|+|+|++++||+++.++++||+.+ +|||.
T Consensus       217 ~~~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          217 VAEKGIRVNIVAPGP-IWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             HGGGTCEEEEEEECS-BCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HhhcCeEEEEEecCc-CccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999999999996 66665322111        01234567789999999999999999999999999 77764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.2e-42  Score=332.41  Aligned_cols=243  Identities=16%  Similarity=0.182  Sum_probs=199.7

Q ss_pred             CCCCcccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           1 MINTGKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      |..+++|+||++|||||++  |||+++|++|+++|++|++++|+.+..        +..+++....+.+.++.+|++|++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~Dv~d~~   93 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK--------KRVDPLAESLGVKLTVPCDVSDAE   93 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH--------HHHHHHHHHHTCCEEEECCTTCHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH--------HHHHHHHHhcCCeEEEEcCCCCHH
Confidence            4567789999999999996  999999999999999999999985421        222333333345788999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+++|+||+||||||+......                                                 
T Consensus        94 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~-------------------------------------------------  124 (296)
T 3k31_A           94 SVDNMFKVLAEEWGSLDFVVHAVAFSDKNEL-------------------------------------------------  124 (296)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCHHHH-------------------------------------------------
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCcccc-------------------------------------------------
Confidence            9999999999999999999999998653100                                                 


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                            ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+|+++|++
T Consensus       125 ------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~--~~~~~~Y~asKaal~~l~~  194 (296)
T 3k31_A          125 ------KGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKV--VPHYNVMGVCKAALEASVK  194 (296)
T ss_dssp             ------TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSC--CTTTTHHHHHHHHHHHHHH
T ss_pred             ------cCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccC--CCCchhhHHHHHHHHHHHH
Confidence                  012237889999999999999999999999999976  589999999999877  4788999999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +++.|++++|||||+|+||+ +.|++......        ....+..++.+|+|+|++++||+++.++++||+++ +|+|
T Consensus       195 ~la~e~~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          195 YLAVDLGKQQIRVNAISAGP-VRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             HHHHHHHTTTEEEEEEEECC-CCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhhcCcEEEEEEECC-CcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence            99999999999999999996 55533211000        00124567889999999999999999999999999 7776


Q ss_pred             HH
Q psy6113         310 VL  311 (406)
Q Consensus       310 ~~  311 (406)
                      +.
T Consensus       274 ~~  275 (296)
T 3k31_A          274 YH  275 (296)
T ss_dssp             GG
T ss_pred             cc
Confidence            54

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.6e-42  Score=329.23  Aligned_cols=252  Identities=17%  Similarity=0.191  Sum_probs=199.4

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChH--
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA-KTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEH--   78 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~-r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~--   78 (406)
                      +|.+|++|++|||||++|||+++|++|+++|++|++++ |+.++       +++..+++. ..+.++.++.+|+++++  
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~   75 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE-------ANALSATLNARRPNSAITVQADLSNVATA   75 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHHSTTCEEEEECCCSSSCBC
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHH-------HHHHHHHHhhhcCCeeEEEEeecCCcccc
Confidence            46789999999999999999999999999999999999 87643       334555565 55778999999999999  


Q ss_pred             ---------------HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHH
Q psy6113          79 ---------------AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAV  143 (406)
Q Consensus        79 ---------------~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (406)
                                     +++++++++.+.+|++|+||||||+....+..+.+.+.++                         
T Consensus        76 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-------------------------  130 (291)
T 1e7w_A           76 PVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE-------------------------  130 (291)
T ss_dssp             CCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC--------------------------------
T ss_pred             cccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccc-------------------------
Confidence                           9999999999999999999999998754433200000000                         


Q ss_pred             HHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC------CCeEEEeCCCCCCCC
Q psy6113         144 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN------HAHILNISPPLNLNP  217 (406)
Q Consensus       144 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~------~g~Iv~vsS~~~~~~  217 (406)
                                          ......+.+.++|+.++++|+.++++++++++|+|++++      .++||++||..+..+
T Consensus       131 --------------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~  190 (291)
T 1e7w_A          131 --------------------PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP  190 (291)
T ss_dssp             --------------------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC
T ss_pred             --------------------cccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC
Confidence                                000000122889999999999999999999999999877      699999999999877


Q ss_pred             CccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcC------CCccccc-ccCChhhHHHHHH
Q psy6113         218 FWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTG------GSADAKA-TSRKPEIMADAAY  290 (406)
Q Consensus       218 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~------~~~~~~~-~~~~pe~vA~~v~  290 (406)
                        .+++..|++||+|+.+|+++++.|++++||+||+|+||+ +.|++ + ..+      ....+.. ++.+|+|+|++++
T Consensus       191 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~-v~T~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~  265 (291)
T 1e7w_A          191 --LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL-SVLVD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVI  265 (291)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS-BCCGG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCC-ccCCc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence              478899999999999999999999999999999999996 56655 2 110      0012344 7789999999999


Q ss_pred             HhhcCCCCCccceEE-EehhHH
Q psy6113         291 YILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       291 ~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ||+++.++++||+++ +|+|+.
T Consensus       266 ~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          266 FLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCCcccCccCcEEEECCCcc
Confidence            999998999999999 777753

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.7e-42  Score=322.36  Aligned_cols=232  Identities=20%  Similarity=0.227  Sum_probs=192.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++       ++..+++...+.++.++.+|++|++++++++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL-------APLVAEIEAAGGRIVARSLDARNEDEVTAFL   75 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGG-------HHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCeEEEEECcCCCHHHHHHHH
Confidence            468999999999999999999999999999999999987653       4567777778889999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+. |++|+||||||+....+..                                                      
T Consensus        76 ~~~~~~-g~id~lv~nAg~~~~~~~~------------------------------------------------------  100 (252)
T 3h7a_A           76 NAADAH-APLEVTIFNVGANVNFPIL------------------------------------------------------  100 (252)
T ss_dssp             HHHHHH-SCEEEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHhh-CCceEEEECCCcCCCCCcc------------------------------------------------------
Confidence            999999 9999999999987644333                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|+
T Consensus       101 -----~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~  173 (252)
T 3h7a_A          101 -----ETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG--GSGFAAFASAKFGLRAVAQSMAREL  173 (252)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC--CCCCccHHHHHHHHHHHHHHHHHHh
Confidence                 788999999999999999999999999999998899999999999887  4789999999999999999999999


Q ss_pred             cCCCeEE-EEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEEEe
Q psy6113         245 KGDNIAV-NALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID  307 (406)
Q Consensus       245 ~~~gI~v-n~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d  307 (406)
                      +++|||| |+|+||+ +.|++.+...+..      ..+. ++.+|+|+|++++||++++.++++|++...
T Consensus       174 ~~~gi~v~n~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~-~~~~pedvA~~~~~l~s~~~~~~~~~i~~~  241 (252)
T 3h7a_A          174 MPKNIHVAHLIIDSG-VDTAWVRERREQMFGKDALANPD-LLMPPAAVAGAYWQLYQQPKSAWTFEMEIR  241 (252)
T ss_dssp             GGGTEEEEEEEEC-----------------------------CCHHHHHHHHHHHHHCCGGGBCSEEEEB
T ss_pred             hhcCCEEEEEecCCc-cCChhhhccchhhhhhhhhcCCc-cCCCHHHHHHHHHHHHhCchhcceeeEEee
Confidence            9999999 9999996 6776655433221      1122 378999999999999998888899998743

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.4e-42  Score=321.31  Aligned_cols=235  Identities=20%  Similarity=0.263  Sum_probs=194.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--C-CeeeeeeecCCChHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--G-GNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g-~~~~~~~~Dl~~~~~v~   81 (406)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...  + .++.++.+|++|+++++
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   75 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQN-------LEKVHDEIMRSNKHVQEPIVLPLDITDCTKAD   75 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHH-------HHHHHHHHHHHCTTSCCCEEEECCTTCHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHHhccccCcceEEeccCCCHHHHH
Confidence            47899999999999999999999999999999999998764       33455555554  3 67889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+||||||+....+                                                     
T Consensus        76 ~~~~~~~~~~g~iD~lvnnAg~~~~~~-----------------------------------------------------  102 (250)
T 3nyw_A           76 TEIKDIHQKYGAVDILVNAAAMFMDGS-----------------------------------------------------  102 (250)
T ss_dssp             HHHHHHHHHHCCEEEEEECCCCCCCCC-----------------------------------------------------
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCC-----------------------------------------------------
Confidence            999999999999999999999864322                                                     


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                            + +.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.  ++...|++||+|+++|+++++
T Consensus       103 ------~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~Y~asKaa~~~l~~~la  173 (250)
T 3nyw_A          103 ------L-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF--ADGGIYGSTKFALLGLAESLY  173 (250)
T ss_dssp             ------C-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------CCTTHHHHHHHHHHHHHHHHH
T ss_pred             ------C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC--CCCcchHHHHHHHHHHHHHHH
Confidence                  1 5678899999999999999999999999999988999999999998753  458899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCC-ccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPS-LTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~-~tG~~i-~d~g~~  311 (406)
                      .|++++|||||+|+||+ +.|++.+.....  .+..++.+|+|+|++++||+++.+.. +++..+ +|+|..
T Consensus       174 ~e~~~~gi~vn~v~PG~-v~T~~~~~~~~~--~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          174 RELAPLGIRVTTLCPGW-VNTDMAKKAGTP--FKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSII  242 (250)
T ss_dssp             HHHGGGTEEEEEEEESS-BCSHHHHHTTCC--SCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHHH
T ss_pred             HHhhhcCcEEEEEecCc-ccCchhhhcCCC--cccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeecccc
Confidence            99999999999999996 677776655433  35567889999999999999966554 555566 666554

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.9e-42  Score=328.48  Aligned_cols=238  Identities=22%  Similarity=0.273  Sum_probs=197.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++          ..+.....+.++.++.+|+++++++++++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   70 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAER----------LRELEVAHGGNAVGVVGDVRSLQDQKRAA   70 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHHHHHHTBTTEEEEECCTTCHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHH----------HHHHHHHcCCcEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998653          12222334678999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|+||||||+........                                                     
T Consensus        71 ~~~~~~~g~iD~lvnnAg~~~~~~~~~-----------------------------------------------------   97 (281)
T 3zv4_A           71 ERCLAAFGKIDTLIPNAGIWDYSTALA-----------------------------------------------------   97 (281)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCTTCCGG-----------------------------------------------------
T ss_pred             HHHHHhcCCCCEEEECCCcCccccccc-----------------------------------------------------
Confidence            999999999999999999865432210                                                     


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                       ....+.+.++|++++++|+.++++++++++|+|++++ |+||++||..+..+  .++...|++||+|+++|+++++.|+
T Consensus        98 -~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~  173 (281)
T 3zv4_A           98 -DLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYP--NGGGPLYTATKHAVVGLVRQMAFEL  173 (281)
T ss_dssp             -GSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSS--SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccC--CCCCchhHHHHHHHHHHHHHHHHHh
Confidence             0112566788999999999999999999999998875 89999999999877  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhc---------CC-------CcccccccCChhhHHHHHHHhhc-CCCCCccceEE-E
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLT---------GG-------SADAKATSRKPEIMADAAYYILS-SNPPSLTGQFL-I  306 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~---------~~-------~~~~~~~~~~pe~vA~~v~~L~s-~~~~~~tG~~i-~  306 (406)
                      +++ ||||+|+||+ +.|++.....         ..       ...+..++.+|+|+|++++||++ +.+.++||+.+ +
T Consensus       174 ~~~-Irvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~v  251 (281)
T 3zv4_A          174 APH-VRVNGVAPGG-MNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNY  251 (281)
T ss_dssp             TTT-SEEEEEEECS-SCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEE
T ss_pred             cCC-CEEEEEECCc-CcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEE
Confidence            987 9999999996 5665432110         00       01245678899999999999999 78889999999 7


Q ss_pred             ehhHH
Q psy6113         307 DDEVL  311 (406)
Q Consensus       307 d~g~~  311 (406)
                      |||+.
T Consensus       252 dGG~~  256 (281)
T 3zv4_A          252 DGGMG  256 (281)
T ss_dssp             SSSGG
T ss_pred             CCCCc
Confidence            77765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.3e-42  Score=327.69  Aligned_cols=229  Identities=26%  Similarity=0.388  Sum_probs=197.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+...                 ..+..+.+|++|+++++++
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------------NVSDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------------TSSEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------------CceeEEEecCCCHHHHHHH
Confidence            45789999999999999999999999999999999999876532                 2456788999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+..                                                     
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~~~~~~-----------------------------------------------------   98 (269)
T 3vtz_A           72 VEKTTKKYGRIDILVNNAGIEQYSPLH-----------------------------------------------------   98 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcc-----------------------------------------------------
Confidence            999999999999999999986544332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus        99 ------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  170 (269)
T 3vtz_A           99 ------LTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA--TKNAAAYVTSKHALLGLTRSVAID  170 (269)
T ss_dssp             ------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC--CCCChhHHHHHHHHHHHHHHHHHH
Confidence                  788999999999999999999999999999998899999999999877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc----CC-------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT----GG-------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~----~~-------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      +++ ||+||+|+||+ +.|++.....    ..             ...+..++.+|+|+|++++||+++.++++||+++ 
T Consensus       171 ~~~-~i~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~  248 (269)
T 3vtz_A          171 YAP-KIRCNAVCPGT-IMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLT  248 (269)
T ss_dssp             HTT-TEEEEEEEECS-BCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hcC-CCEEEEEEECC-CcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEE
Confidence            998 89999999996 5665543221    00             0124466789999999999999999999999999 


Q ss_pred             EehhHHH
Q psy6113         306 IDDEVLK  312 (406)
Q Consensus       306 ~d~g~~~  312 (406)
                      +|+|+..
T Consensus       249 vdGG~~~  255 (269)
T 3vtz_A          249 VDGGLLS  255 (269)
T ss_dssp             ESTTGGG
T ss_pred             ECCCccc
Confidence            8887763

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1e-42  Score=329.50  Aligned_cols=240  Identities=26%  Similarity=0.363  Sum_probs=202.3

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.++++|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+ ++.++.+|++|++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~-~~~~~~~Dv~d~~~v   92 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA-------CADTATRLSAYG-DCQAIPADLSSEAGA   92 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH-------HHHHHHHHTTSS-CEEECCCCTTSHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcC-ceEEEEeeCCCHHHH
Confidence            456678999999999999999999999999999999999998653       233445554444 788899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|+||||||+....+.                                                   
T Consensus        93 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~---------------------------------------------------  121 (276)
T 2b4q_A           93 RRLAQALGELSARLDILVNNAGTSWGAAL---------------------------------------------------  121 (276)
T ss_dssp             HHHHHHHHHHCSCCSEEEECCCCCCCCCT---------------------------------------------------
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCc---------------------------------------------------
Confidence            99999999999999999999998654333                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC----CeEEEeCCCCCCCCCccCCch-hhhHhhHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH----AHILNISPPLNLNPFWFKNHV-AYTISKYGMSM  235 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~----g~Iv~vsS~~~~~~~~~~~~~-~Y~asKaal~~  235 (406)
                              .+.+.++|++++++|+.+++.++++++|+|++++.    ++||++||..+..+  .++.. .|++||+|+++
T Consensus       122 --------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~--~~~~~~~Y~asK~a~~~  191 (276)
T 2b4q_A          122 --------ESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA--MGEQAYAYGPSKAALHQ  191 (276)
T ss_dssp             --------TSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC--CCCSCTTHHHHHHHHHH
T ss_pred             --------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC--CCCCccccHHHHHHHHH
Confidence                    27888999999999999999999999999998776    89999999988876  35667 99999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC------C--cccccccCChhhHHHHHHHhhcCCCCCccceEE-E
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG------S--ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-I  306 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~--~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~  306 (406)
                      |+++++.|++++||+||+|+||+ +.|++.+.....      .  ..+..++.+|+|+|++++||+++.++++||+++ +
T Consensus       192 ~~~~la~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~v  270 (276)
T 2b4q_A          192 LSRMLAKELVGEHINVNVIAPGR-FPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPI  270 (276)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECC-CCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHhcccCeEEEEEEecc-CcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEe
Confidence            99999999999999999999996 455443221100      0  124466789999999999999988899999999 7


Q ss_pred             ehhH
Q psy6113         307 DDEV  310 (406)
Q Consensus       307 d~g~  310 (406)
                      |+|+
T Consensus       271 dGG~  274 (276)
T 2b4q_A          271 DGGF  274 (276)
T ss_dssp             STTT
T ss_pred             CCCc
Confidence            7764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-43  Score=327.07  Aligned_cols=237  Identities=23%  Similarity=0.282  Sum_probs=206.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++       .++..+++...+.++.++.+|++|++++++++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQAS-------AEKFENSMKEKGFKARGLVLNISDIESIQNFF   73 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998764       34556677777889999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|+||||||+.......                                                      
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~~~~~~------------------------------------------------------   99 (247)
T 3lyl_A           74 AEIKAENLAIDILVNNAGITRDNLMM------------------------------------------------------   99 (247)
T ss_dssp             HHHHHTTCCCSEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchh------------------------------------------------------
Confidence            99999999999999999987544332                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.|+
T Consensus       100 -----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  172 (247)
T 3lyl_A          100 -----RMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG--NPGQTNYCAAKAGVIGFSKSLAYEV  172 (247)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC--CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence                 788999999999999999999999999999998899999999988766  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcC------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTG------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++.+...+      ....+..++.+|+|+|++++||+++.++++||+++ +|+|+
T Consensus       173 ~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          173 ASRNITVNVVAPGF-IATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             GGGTEEEEEEEECS-BCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCeEEEEEeeCc-EecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCE
Confidence            99999999999996 55544322111      01134566789999999999999998999999999 77765

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=6e-43  Score=325.39  Aligned_cols=236  Identities=28%  Similarity=0.418  Sum_probs=200.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEec-CCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK-TAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r-~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +|+||+++||||++|||+++|++|+++|++|++++| +.++       +++..+++...+.++.++.+|++|++++++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQK-------ANEVVDEIKKLGSDAIAVRADVANAEDVTNMV   73 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            368999999999999999999999999999999998 4432       33455666666778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|+||||||+....+.                                                       
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~-------------------------------------------------------   98 (246)
T 2uvd_A           74 KQTVDVFGQVDILVNNAGVTKDNLL-------------------------------------------------------   98 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCG-------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999998644332                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|+
T Consensus        99 ----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~  172 (246)
T 2uvd_A           99 ----MRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG--NPGQANYVAAKAGVIGLTKTSAKEL  172 (246)
T ss_dssp             ----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC--CCCCchHHHHHHHHHHHHHHHHHHh
Confidence                2788999999999999999999999999999888899999999988765  3678999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++.+......      ..+..++.+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       173 ~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          173 ASRNITVNAIAPGF-IATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             GGGTEEEEEEEECS-BGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             hhcCeEEEEEEecc-ccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            99999999999996 5665432211100      123456789999999999999988899999999 77764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-42  Score=325.75  Aligned_cols=238  Identities=26%  Similarity=0.377  Sum_probs=202.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ..+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++ ...+.++.++.+|+++++++++
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   88 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEE-------ASEAAQKLTEKYGVETMAFRCDVSNYEEVKK   88 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            457899999999999999999999999999999999998653       23344455 4457788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+....+.                                                     
T Consensus        89 ~~~~~~~~~g~iD~lvnnAg~~~~~~~-----------------------------------------------------  115 (267)
T 1vl8_A           89 LLEAVKEKFGKLDTVVNAAGINRRHPA-----------------------------------------------------  115 (267)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCG-----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCh-----------------------------------------------------
Confidence            999999999999999999998654332                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCC-CCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPL-NLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~-~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                            .+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.. +..+  .++...|++||+++++|+++++
T Consensus       116 ------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--~~~~~~Y~asK~a~~~~~~~la  187 (267)
T 1vl8_A          116 ------EEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT--MPNISAYAASKGGVASLTKALA  187 (267)
T ss_dssp             ------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC--SSSCHHHHHHHHHHHHHHHHHH
T ss_pred             ------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC--CCCChhHHHHHHHHHHHHHHHH
Confidence                  278899999999999999999999999999988889999999998 7766  4678999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .|++++||+||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.++++||+.+ +|+|+
T Consensus       188 ~e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          188 KEWGRYGIRVNVIAPGW-YRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHGGGTCEEEEEEECC-BCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhcccCeEEEEEEecc-CccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            99999999999999996 455443322110        0123456789999999999999998899999999 77775

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1e-42  Score=328.44  Aligned_cols=240  Identities=23%  Similarity=0.281  Sum_probs=204.7

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +.++++||+++||||++|||+++|++|+++|++|++++|+.+.      ..+...+++...+.++.++.+|+++++++++
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   96 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAE------VADALKNELEEKGYKAAVIKFDAASESDFIE   96 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            4678999999999999999999999999999999999996543      1334556677778899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+.......                                                    
T Consensus        97 ~~~~~~~~~g~id~li~nAg~~~~~~~~----------------------------------------------------  124 (271)
T 4iin_A           97 AIQTIVQSDGGLSYLVNNAGVVRDKLAI----------------------------------------------------  124 (271)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCcccc----------------------------------------------------
Confidence            9999999999999999999987654433                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       125 -------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~  195 (271)
T 4iin_A          125 -------KMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG--NMGQTNYSASKGGMIAMSKSFAY  195 (271)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC--CCCchHhHHHHHHHHHHHHHHHH
Confidence                   788999999999999999999999999999998899999999988766  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++||+||+|+||+ +.|++.+...+..      ..+..++.+|+|+|++++||+++.+.++||+.+ +|||+
T Consensus       196 e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          196 EGALRNIRFNSVTPGF-IETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHTTTEEEEEEEECS-BCCC------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHhCcEEEEEEeCc-ccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            9999999999999996 5666554433221      124456779999999999999998999999999 77764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-42  Score=330.48  Aligned_cols=245  Identities=22%  Similarity=0.360  Sum_probs=201.4

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC-----CcccHHHHHHHHHHcCCeeeeeeecCCCh
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK-----LPGTIYSAAKEVEDAGGNCLPCIVDIRDE   77 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~-----~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~   77 (406)
                      .|.+|+||++|||||++|||+++|++|+++|++|++++|+......     ..+.+++...++...+.++.++.+|++|+
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            4678999999999999999999999999999999999998443221     12344555666777788999999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      ++++++++++.+.+|++|+||||||+....  .                                               
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~-----------------------------------------------  114 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLG--A-----------------------------------------------  114 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC--T-----------------------------------------------
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCccc--C-----------------------------------------------
Confidence            999999999999999999999999986432  1                                               


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTI  228 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~a  228 (406)
                                  +.+.++|++++++|+.|+++++++++|+|.  +.++||++||..+..+.         ..++...|++
T Consensus       115 ------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~a  180 (287)
T 3pxx_A          115 ------------HLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY  180 (287)
T ss_dssp             ------------TCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHHHHHHHCCC-----CHHHHHHHHH
T ss_pred             ------------cCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchhcccccccccccccCCCccchHHH
Confidence                        467889999999999999999999999993  45899999998765431         0146788999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHH------HhcCCC---------------cccccccCChhhHHH
Q psy6113         229 SKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIE------MLTGGS---------------ADAKATSRKPEIMAD  287 (406)
Q Consensus       229 sKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~------~~~~~~---------------~~~~~~~~~pe~vA~  287 (406)
                      ||+|+++|+++++.|++++||+||+|+||+ +.|++.+      ...+..               .....++.+|+|+|+
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~  259 (287)
T 3pxx_A          181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTN-VNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISN  259 (287)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEESS-BSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCc-cccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHh
Confidence            999999999999999999999999999996 5554432      111100               001156779999999


Q ss_pred             HHHHhhcCCCCCccceEE-EehhHH
Q psy6113         288 AAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       288 ~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++||+|+.++++||+.+ +|+|..
T Consensus       260 ~v~fL~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          260 AVCFLASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hHheecchhhcCCCCceEeECchhh
Confidence            999999999999999999 787764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.3e-42  Score=325.84  Aligned_cols=237  Identities=27%  Similarity=0.355  Sum_probs=198.0

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      |+||+++||||++|||+++|++|+++|++|++++|+.++      .+++..+++... +.++.++.+|++|+++++++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   75 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA------EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH------HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch------HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHH
Confidence            679999999999999999999999999999999998643      023344555444 6788999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.+|++|+||||||+....+.                                                        
T Consensus        76 ~~~~~~g~iD~lv~~Ag~~~~~~~--------------------------------------------------------   99 (260)
T 1x1t_A           76 NAVRQMGRIDILVNNAGIQHTALI--------------------------------------------------------   99 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCG--------------------------------------------------------
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCh--------------------------------------------------------
Confidence            999999999999999997654332                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|++
T Consensus       100 ---~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~  174 (260)
T 1x1t_A          100 ---EDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETA  174 (260)
T ss_dssp             ---GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ---hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC--CCCCchHHHHHHHHHHHHHHHHHHhc
Confidence               2788999999999999999999999999999888899999999998876  47789999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcC-----------CC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-E
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTG-----------GS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-I  306 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~-----------~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~  306 (406)
                      ++||+||+|+||+ +.|++.+....           ..       ..+..++.+|+|+|++++||+++.++++||+.+ +
T Consensus       175 ~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~v  253 (260)
T 1x1t_A          175 GQGITANAICPGW-VRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSV  253 (260)
T ss_dssp             TTTEEEEEEEECC-BCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             cCCEEEEEEeecC-ccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEE
Confidence            9999999999996 56655433211           00       013346779999999999999988899999999 7


Q ss_pred             ehhHH
Q psy6113         307 DDEVL  311 (406)
Q Consensus       307 d~g~~  311 (406)
                      |+|+.
T Consensus       254 dgG~~  258 (260)
T 1x1t_A          254 DGGWT  258 (260)
T ss_dssp             STTGG
T ss_pred             CCCcc
Confidence            77753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.2e-43  Score=331.65  Aligned_cols=239  Identities=22%  Similarity=0.299  Sum_probs=202.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC---eEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA---NIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHA   79 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~   79 (406)
                      .+|+||++|||||++|||+++|++|+++|+   +|++++|+.++       +++..+++...  +.++.++.+|++|+++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~  101 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK-------LEELKKTIDQEFPNAKVHVAQLDITQAEK  101 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH-------HHHHHHHHHHHCTTCEEEEEECCTTCGGG
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH-------HHHHHHHHHhhCCCCeEEEEECCCCCHHH
Confidence            568999999999999999999999999998   99999998764       34455566554  6789999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      ++++++++.+.+|++|+||||||+.....                                                   
T Consensus       102 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~---------------------------------------------------  130 (287)
T 3rku_A          102 IKPFIENLPQEFKDIDILVNNAGKALGSD---------------------------------------------------  130 (287)
T ss_dssp             HHHHHHTSCGGGCSCCEEEECCCCCCCCC---------------------------------------------------
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCcCCCCC---------------------------------------------------
Confidence            99999999999999999999999764222                                                   


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                             ++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++
T Consensus       131 -------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~  201 (287)
T 3rku_A          131 -------RVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA--YPTGSIYCASKFAVGAFTDS  201 (287)
T ss_dssp             -------CTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHH
T ss_pred             -------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC--CCCCchHHHHHHHHHHHHHH
Confidence                   123889999999999999999999999999999998999999999999877  47889999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcc------cccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSAD------AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~------~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++.|++++||+||+|+||+ +.|++..........      ......+|+|+|++++||+++.+.+++|+.+ +++|..
T Consensus       202 la~e~~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          202 LRKELINTKIRVILIAPGL-VETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHTTTSSCEEEEEEESC-EESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHhhhcCCEEEEEeCCc-CcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            9999999999999999996 566554322211110      1112348999999999999999999999998 676644

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.8e-42  Score=330.71  Aligned_cols=240  Identities=19%  Similarity=0.192  Sum_probs=197.3

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      |.+|+||++|||||+  +|||+++|++|+++|++|++++|+.+.        .+..+++....+++.++.+|++|+++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   97 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL--------KKRVEPLAEELGAFVAGHCDVADAASID   97 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH--------HHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH--------HHHHHHHHHhcCCceEEECCCCCHHHHH
Confidence            457999999999999  569999999999999999999998431        2233444444457889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|++|+||||||+......                                                    
T Consensus        98 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~----------------------------------------------------  125 (293)
T 3grk_A           98 AVFETLEKKWGKLDFLVHAIGFSDKDEL----------------------------------------------------  125 (293)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCHHHH----------------------------------------------------
T ss_pred             HHHHHHHHhcCCCCEEEECCccCCcccc----------------------------------------------------
Confidence            9999999999999999999998652100                                                    


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                         ..++.+.+.++|+.++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+|+++|+++++
T Consensus       126 ---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la  198 (293)
T 3grk_A          126 ---TGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKV--MPNYNVMGVAKAALEASVKYLA  198 (293)
T ss_dssp             ---TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHH
T ss_pred             ---cccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccC--CCchHHHHHHHHHHHHHHHHHH
Confidence               012237889999999999999999999999999986  589999999999877  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++|||||+|+||+ +.|++.+......        ..+..++.+|+|+|++++||+++.++++||+++ +|+|+.
T Consensus       199 ~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          199 VDLGPQNIRVNAISAGP-IKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             HHHGGGTEEEEEEEECC-CCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhHhCCEEEEEecCC-CcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcc
Confidence            99999999999999996 6665544332110        124567889999999999999999999999999 777765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.4e-42  Score=323.81  Aligned_cols=239  Identities=21%  Similarity=0.320  Sum_probs=202.2

Q ss_pred             CCcccCCcEEEEecCC-chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCCChHHH
Q psy6113           3 NTGKLSGLTIFITGAS-RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIRDEHAV   80 (406)
Q Consensus         3 ~~~~l~gk~alVTGas-~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~~~~~v   80 (406)
                      ++++|+||+++||||+ +|||+++|++|+++|++|++++|+.++       +.+..+++...+ .++.++.+|++|++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v   88 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERR-------LGETRDQLADLGLGRVEAVVCDVTSTEAV   88 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTCSSCEEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHH-------HHHHHHHHHhcCCCceEEEEeCCCCHHHH
Confidence            4667999999999997 699999999999999999999998764       334555665543 6899999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.++++++|+||||||+....+..                                                  
T Consensus        89 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~--------------------------------------------------  118 (266)
T 3o38_A           89 DALITQTVEKAGRLDVLVNNAGLGGQTPVV--------------------------------------------------  118 (266)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGG--------------------------------------------------
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcCCCCCcc--------------------------------------------------
Confidence            999999999999999999999986554333                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                               +.+.++|++++++|+.++++++++++|+|+++ +.++||++||..+..+  .+++..|++||+|+++|+++
T Consensus       119 ---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~  187 (266)
T 3o38_A          119 ---------DMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA--QHSQSHYAAAKAGVMALTRC  187 (266)
T ss_dssp             ---------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHH
T ss_pred             ---------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC--CCCCchHHHHHHHHHHHHHH
Confidence                     78899999999999999999999999999987 6789999999999877  47889999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++.|++++||+||+|+||+ +.|++.+......       ..+..++.+|+|+|++++||+++.++++||+++ +|+|+
T Consensus       188 la~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          188 SAIEAVEFGVRINAVSPSI-ARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHGGGTEEEEEEEECC-CCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHHHHcCcEEEEEeCCc-ccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            9999999999999999996 6666544332211       124566789999999999999998999999999 77764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=5e-42  Score=321.63  Aligned_cols=237  Identities=30%  Similarity=0.391  Sum_probs=195.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++++++|+++||||++|||+++|++|+++|++|++++|+.+++       ++..   ...+.++.++.+|+++.++++++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~~---~~~~~~~~~~~~D~~~~~~~~~~   73 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA-------ERVA---GEIGDAALAVAADISKEADVDAA   73 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHH---HHHCTTEEEEECCTTSHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHH---HHhCCceEEEEecCCCHHHHHHH
Confidence            4678999999999999999999999999999999999986542       2222   33467899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+......                                                      
T Consensus        74 ~~~~~~~~g~id~li~~Ag~~~~~~~------------------------------------------------------   99 (261)
T 3n74_A           74 VEAALSKFGKVDILVNNAGIGHKPQN------------------------------------------------------   99 (261)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCSCC------------------------------------------------------
T ss_pred             HHHHHHhcCCCCEEEECCccCCCCCC------------------------------------------------------
Confidence            99999999999999999998653221                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC----CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN----HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~----~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                          +.+.+.++|++++++|+.++++++++++|+|++++    .++||++||..+..+  .+++..|++||+|+++|+++
T Consensus       100 ----~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~  173 (261)
T 3n74_A          100 ----AELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP--RPNLAWYNATKGWVVSVTKA  173 (261)
T ss_dssp             ----GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHH
T ss_pred             ----cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC--CCCccHHHHHHHHHHHHHHH
Confidence                12678999999999999999999999999998864    678999999999877  47889999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCC----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      ++.|++++||+||+|+||+ +.|++.+.....          ...+..++.+|+|+|++++||+++.++++||+++ +|+
T Consensus       174 la~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  252 (261)
T 3n74_A          174 LAIELAPAKIRVVALNPVA-GETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDG  252 (261)
T ss_dssp             HHHHHGGGTEEEEEEEEC--------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHhhhcCcEEEEEecCc-ccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecC
Confidence            9999999999999999996 666665433211          1124456789999999999999999999999999 777


Q ss_pred             hHH
Q psy6113         309 EVL  311 (406)
Q Consensus       309 g~~  311 (406)
                      |..
T Consensus       253 G~~  255 (261)
T 3n74_A          253 GRS  255 (261)
T ss_dssp             TTT
T ss_pred             Ccc
Confidence            653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.5e-42  Score=329.34  Aligned_cols=238  Identities=26%  Similarity=0.379  Sum_probs=203.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+.+..      .+...+.+...+.++.++.+|++|+++++++
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  115 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD------ANETKQYVEKEGVKCVLLPGDLSDEQHCKDI  115 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHTTTCCEEEEESCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3568999999999999999999999999999999999986531      2334555666788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+......                                                      
T Consensus       116 ~~~~~~~~g~iD~lvnnAg~~~~~~~------------------------------------------------------  141 (291)
T 3ijr_A          116 VQETVRQLGSLNILVNNVAQQYPQQG------------------------------------------------------  141 (291)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCSS------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCCCC------------------------------------------------------
Confidence            99999999999999999997643221                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          +.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus       142 ----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e  213 (291)
T 3ijr_A          142 ----LEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEG--NETLIDYSATKGAIVAFTRSLSQS  213 (291)
T ss_dssp             ----GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCC--CCCChhHHHHHHHHHHHHHHHHHH
Confidence                237889999999999999999999999999965  479999999988866  477899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++......       ....+..++.+|+|+|++++||+++.++++||+++ +|+|+
T Consensus       214 ~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          214 LVQKGIRVNGVAPGP-IWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             HGGGTCEEEEEEECS-BCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HhhcCEEEEEEeeCC-CcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCc
Confidence            999999999999996 56655433211       11235667889999999999999999999999999 77765

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.5e-42  Score=321.07  Aligned_cols=238  Identities=18%  Similarity=0.230  Sum_probs=202.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEec-CCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK-TAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r-~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ....++|++|||||++|||+++|++|+++|++|+++++ +.++       ..+..+++...+.++.++.+|++|.+++++
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPR-------RVKWLEDQKALGFDFYASEGNVGDWDSTKQ   80 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSS-------HHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHH-------HHHHHHHHHhcCCeeEEEecCCCCHHHHHH
Confidence            34678999999999999999999999999999999884 4433       334566677778889999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+.......                                                    
T Consensus        81 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~----------------------------------------------------  108 (256)
T 3ezl_A           81 AFDKVKAEVGEIDVLVNNAGITRDVVFR----------------------------------------------------  108 (256)
T ss_dssp             HHHHHHHHTCCEEEEEECCCCCCCCCTT----------------------------------------------------
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCchh----------------------------------------------------
Confidence            9999999999999999999987554433                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.++||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus       109 -------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~  179 (256)
T 3ezl_A          109 -------KMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG--QFGQTNYSTAKAGIHGFTMSLAQ  179 (256)
T ss_dssp             -------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS--CSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC--CCCCcccHHHHHHHHHHHHHHHH
Confidence                   889999999999999999999999999999998899999999999877  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++||+||+|+||+ +.|++.+...+..      ..+..++.+|+|+|++++||+++.+.++||+.+ +|+|.
T Consensus       180 e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          180 EVATKGVTVNTVSPGY-IGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             HHGGGTEEEEEEEECS-BCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHhCCEEEEEEECc-ccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCE
Confidence            9999999999999996 6676654432110      124456779999999999999998999999999 77764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.2e-42  Score=321.92  Aligned_cols=235  Identities=23%  Similarity=0.324  Sum_probs=200.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||+++|++|+++|++|++++|+.++     ..+++..+++...+.++.++.+|++|+++++++++++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-----EQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAA   76 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGH-----HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            7999999999999999999999999999999998653     01234455666667789999999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.+|++|+||||||+....+.                                                           
T Consensus        77 ~~~g~iD~lv~nAg~~~~~~~-----------------------------------------------------------   97 (258)
T 3a28_C           77 EKLGGFDVLVNNAGIAQIKPL-----------------------------------------------------------   97 (258)
T ss_dssp             HHHTCCCEEEECCCCCCCCCG-----------------------------------------------------------
T ss_pred             HHhCCCCEEEECCCCCCCCCh-----------------------------------------------------------
Confidence            999999999999998654332                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                      .+.+.++|++++++|+.++++++++++|+|++++. |+||++||..+..+  .++...|++||+++++|+++++.|++++
T Consensus        98 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~  175 (258)
T 3a28_C           98 LEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG--FPILSAYSTTKFAVRGLTQAAAQELAPK  175 (258)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC--CCCchhHHHHHHHHHHHHHHHHHHHHhh
Confidence            27889999999999999999999999999998876 99999999998876  4778999999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhc--------CC-C--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLT--------GG-S--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~--------~~-~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ||+||+|+||+ +.|++.+...        .. .        ..+..++.+|+|+|++++||+++.++++||+.+ +|+|
T Consensus       176 gi~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          176 GHTVNAYAPGI-VGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             TCEEEEEEECC-BCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CeEEEEEECCc-cCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            99999999996 5666544311        10 1        124456789999999999999998899999999 7766


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      +
T Consensus       255 ~  255 (258)
T 3a28_C          255 M  255 (258)
T ss_dssp             S
T ss_pred             E
Confidence            4

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=9.2e-42  Score=319.06  Aligned_cols=234  Identities=25%  Similarity=0.357  Sum_probs=200.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|++|+++||||++|||+++|++|+++|++|++++|+.+  +       +..+++...+.++.++.+|++|+++++++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~-------~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~   71 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--A-------PALAEIARHGVKAVHHPADLSDVAQIEALFA   71 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--H-------HHHHHHHTTSCCEEEECCCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--H-------HHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            478999999999999999999999999999999999865  1       3455566667788999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+++|++|+||||||+....+.                                                        
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~~~~~--------------------------------------------------------   95 (255)
T 2q2v_A           72 LAEREFGGVDILVNNAGIQHVAPV--------------------------------------------------------   95 (255)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCBCG--------------------------------------------------------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCh--------------------------------------------------------
Confidence            999999999999999998644332                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|++
T Consensus        96 ---~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~  170 (255)
T 2q2v_A           96 ---EQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG--STGKAAYVAAKHGVVGLTKVVGLETA  170 (255)
T ss_dssp             ---GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ---hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC--CCCchhHHHHHHHHHHHHHHHHHHhc
Confidence               2788999999999999999999999999999988899999999998876  47789999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhc--------------C---CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLT--------------G---GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~--------------~---~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      ++||+||+|+||+ +.|++.+...              .   ....+..++.+|+|+|++++||+++.++++||+.+ +|
T Consensus       171 ~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vd  249 (255)
T 2q2v_A          171 TSNVTCNAICPGW-VLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVD  249 (255)
T ss_dssp             TSSEEEEEEEESS-BCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             ccCcEEEEEeeCC-CcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEEC
Confidence            9999999999996 5555432211              0   11134456789999999999999988899999999 77


Q ss_pred             hhH
Q psy6113         308 DEV  310 (406)
Q Consensus       308 ~g~  310 (406)
                      +|+
T Consensus       250 gG~  252 (255)
T 2q2v_A          250 GGW  252 (255)
T ss_dssp             TTG
T ss_pred             CCc
Confidence            765

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=7.8e-42  Score=320.70  Aligned_cols=231  Identities=23%  Similarity=0.336  Sum_probs=189.3

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++++|+||++|||||++|||+++|++|+++|++|++++|+.++          ..+++...+  +.++.+|+++++++++
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~--~~~~~~Dv~~~~~v~~   88 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA----------SVTELRQAG--AVALYGDFSCETGIMA   88 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH----------HHHHHHHHT--CEEEECCTTSHHHHHH
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH----------HHHHHHhcC--CeEEECCCCCHHHHHH
Confidence            4678999999999999999999999999999999999998763          233344444  6788999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+..... .                                                    
T Consensus        89 ~~~~~~~~~g~iD~lv~nAg~~~~~~-~----------------------------------------------------  115 (260)
T 3gem_A           89 FIDLLKTQTSSLRAVVHNASEWLAET-P----------------------------------------------------  115 (260)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCC-T----------------------------------------------------
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCC-C----------------------------------------------------
Confidence            99999999999999999999765433 2                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       116 -------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  186 (260)
T 3gem_A          116 -------GEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG--SSKHIAYCATKAGLESLTLSFAA  186 (260)
T ss_dssp             -------TCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC--CSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC--CCCcHhHHHHHHHHHHHHHHHHH
Confidence                   677889999999999999999999999999998899999999999877  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhc----CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLT----GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~----~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+++ +|+||+|+||+ +.|++.....    .....+..+..+|+|+|++++||+  .++++||+.+ +|+|..
T Consensus       187 e~~~-~Irvn~v~PG~-v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~itG~~i~vdGG~~  256 (260)
T 3gem_A          187 RFAP-LVKVNGIAPAL-LMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGTTLTVNGGRH  256 (260)
T ss_dssp             HHTT-TCEEEEEEECT-TCC---------------CCSCCCCCTHHHHHHHHHHH--HCSSCCSCEEEESTTTT
T ss_pred             HHCC-CCEEEEEeecc-cccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCCCCCEEEECCCcc
Confidence            9998 69999999996 4554422111    011235567789999999999999  3689999999 777653

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=7.7e-42  Score=320.96  Aligned_cols=237  Identities=26%  Similarity=0.339  Sum_probs=202.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++... +.++.++.+|++|+++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   75 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDR-------LHEAARSLKEKFGVRVLEVAVDVATPEGVDAV   75 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHHCCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            46899999999999999999999999999999999998653       33444555544 77899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+.                                                      
T Consensus        76 ~~~~~~~~g~id~lv~~Ag~~~~~~~------------------------------------------------------  101 (263)
T 3ai3_A           76 VESVRSSFGGADILVNNAGTGSNETI------------------------------------------------------  101 (263)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCCCT------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCc------------------------------------------------------
Confidence            99999999999999999998654333                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|
T Consensus       102 -----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  174 (263)
T 3ai3_A          102 -----MEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP--LWYEPIYNVTKAALMMFSKTLATE  174 (263)
T ss_dssp             -----TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC--CCCcchHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999888899999999998876  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC---------CC--------c-ccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG---------GS--------A-DAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~---------~~--------~-~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ++++||+||+|+||+ +.|++......         ..        . .+..++.+|+|+|++++||+++.++++||+.+
T Consensus       175 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~  253 (263)
T 3ai3_A          175 VIKDNIRVNCINPGL-ILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAY  253 (263)
T ss_dssp             HGGGTEEEEEEEECC-BCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEE
T ss_pred             hhhcCcEEEEEecCc-ccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEE
Confidence            999999999999996 55554332210         00        0 23456789999999999999998899999998


Q ss_pred             -EehhH
Q psy6113         306 -IDDEV  310 (406)
Q Consensus       306 -~d~g~  310 (406)
                       +|+|.
T Consensus       254 ~vdgG~  259 (263)
T 3ai3_A          254 FVDGGM  259 (263)
T ss_dssp             EESTTC
T ss_pred             EECCCc
Confidence             77664

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=8e-42  Score=319.65  Aligned_cols=233  Identities=28%  Similarity=0.368  Sum_probs=200.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++++++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   74 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT-------AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQAR   74 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999999999998653       334556666667789999999999999999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.+|++|+||||||+....+.                                                           
T Consensus        75 ~~~g~id~lv~nAg~~~~~~~-----------------------------------------------------------   95 (256)
T 1geg_A           75 KTLGGFDVIVNNAGVAPSTPI-----------------------------------------------------------   95 (256)
T ss_dssp             HHTTCCCEEEECCCCCCCBCG-----------------------------------------------------------
T ss_pred             HHhCCCCEEEECCCCCCCCCh-----------------------------------------------------------
Confidence            999999999999997644332                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                      .+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..+  .++...|++||+++++|+++++.|++++
T Consensus        96 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~  173 (256)
T 1geg_A           96 ESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG--NPELAVYSSSKFAVRGLTQTAARDLAPL  173 (256)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC--CCCchhHHHHHHHHHHHHHHHHHHHHHc
Confidence            2788999999999999999999999999999887 799999999988876  4778899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhc----------CC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLT----------GG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~----------~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ||+||+|+||+ +.|++.....          ..       ...+..++.+|+|+|++++||+++.++++||+.+ +|+|
T Consensus       174 gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          174 GITVNGYCPGI-VKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             TEEEEEEEECS-BSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CeEEEEEEECC-CccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            99999999996 5565543321          11       0123456789999999999999988899999999 7776


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      +
T Consensus       253 ~  253 (256)
T 1geg_A          253 M  253 (256)
T ss_dssp             S
T ss_pred             c
Confidence            4

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.9e-42  Score=318.85  Aligned_cols=239  Identities=25%  Similarity=0.366  Sum_probs=181.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEA-------AEAVAKQIVADGGTAISVAVDVSDPESAKAM   76 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            568999999999999999999999999999999999998664       3456677777788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+.....                                                       
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~-------------------------------------------------------  101 (253)
T 3qiv_A           77 ADRTLAEFGGIDYLVNNAAIFGGMK-------------------------------------------------------  101 (253)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGG-------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCC-------------------------------------------------------
Confidence            9999999999999999999843211                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                       ..++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..     +...|++||+|+++|+++++.|
T Consensus       102 -~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~Y~asK~a~~~~~~~la~e  175 (253)
T 3qiv_A          102 -LDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL-----YSNYYGLAKVGINGLTQQLSRE  175 (253)
T ss_dssp             -GGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------CCHHHHHHHHHHHHHH
T ss_pred             -CcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-----CCchhHHHHHHHHHHHHHHHHH
Confidence             1122378999999999999999999999999999999899999999998763     4567999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++||+||+|+||+ +.|++........       ..+..++.+|+|+|++++||+++.+.++||+++ +|+|..
T Consensus       176 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  250 (253)
T 3qiv_A          176 LGGRNIRINAIAPGP-IDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQI  250 (253)
T ss_dssp             TTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC-----
T ss_pred             HhhcCeEEEEEEecC-CcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCee
Confidence            999999999999996 6665544322211       124456779999999999999998999999999 777654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-42  Score=321.67  Aligned_cols=231  Identities=23%  Similarity=0.307  Sum_probs=197.4

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +|+++++|++|||||++|||+++|++|+++|++|++++|+.++...                .++.++.+|++|++++++
T Consensus        22 ~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------------~~~~~~~~Dv~d~~~v~~   85 (260)
T 3un1_A           22 SMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------------PDIHTVAGDISKPETADR   85 (260)
T ss_dssp             HHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----------------TTEEEEESCTTSHHHHHH
T ss_pred             hhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------------CceEEEEccCCCHHHHHH
Confidence            4678899999999999999999999999999999999999876442                258889999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+++|++|+||||||+....+..                                                    
T Consensus        86 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~----------------------------------------------------  113 (260)
T 3un1_A           86 IVREGIERFGRIDSLVNNAGVFLAKPFV----------------------------------------------------  113 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCCCChh----------------------------------------------------
Confidence            9999999999999999999987554333                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+++++++++|+|++++.++||++||..+..+.+..+...|++||+|+++|+++++.
T Consensus       114 -------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~  186 (260)
T 3un1_A          114 -------EMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAM  186 (260)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence                   7889999999999999999999999999999989999999998887554345678999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhc---CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLT---GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~---~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++||+||+|+||+ +.|++.....   -....+..++.+|+|+|++++||  +.++++||+.+ +|+|..
T Consensus       187 e~~~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~itG~~i~vdGG~~  256 (260)
T 3un1_A          187 EFSRSGVRVNAVSPGV-IKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGEILHVDGGQN  256 (260)
T ss_dssp             HTTTTTEEEEEEEECC-BCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCCSCEEEESTTGG
T ss_pred             HhCcCCeEEEEEeecC-CCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCCCcEEEECCCee
Confidence            9999999999999996 5554321100   00113556788999999999999  45789999999 777764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=9.2e-42  Score=319.00  Aligned_cols=234  Identities=27%  Similarity=0.345  Sum_probs=199.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|++|+++||||++|||+++|++|+++|++|++++|+.+++       ++..+   ..+.++.++.+|++++++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~   71 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG-------AATAR---ELGDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHH---TTGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHH---HhCCceeEEEecCCCHHHHHHHHH
Confidence            57899999999999999999999999999999999986431       12222   225578889999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.+|++|+||||||+....+.                                                        
T Consensus        72 ~~~~~~g~iD~lv~nAg~~~~~~~--------------------------------------------------------   95 (254)
T 1hdc_A           72 YAREEFGSVDGLVNNAGISTGMFL--------------------------------------------------------   95 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCG--------------------------------------------------------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCh--------------------------------------------------------
Confidence            999999999999999997654332                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|++
T Consensus        96 ---~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~  170 (254)
T 1hdc_A           96 ---ETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG--LALTSSYGASKWGVRGLSKLAAVELG  170 (254)
T ss_dssp             ---GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC--CCCchhHHHHHHHHHHHHHHHHHHhh
Confidence               2788999999999999999999999999999988899999999998876  47789999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCC------cccccccC-ChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSR-KPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~-~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++||+||+|+||+ +.|++.+......      ..+..++. +|+|+|++++||+++.++++||+.+ +|+|..
T Consensus       171 ~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          171 TDRIRVNSVHPGM-TYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             GGTEEEEEEEECS-BCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hcCeEEEEEeccc-CcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence            9999999999996 6666655432211      12345667 9999999999999988899999999 777653

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.4e-41  Score=317.56  Aligned_cols=236  Identities=27%  Similarity=0.394  Sum_probs=198.0

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +|.+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|+++++++++
T Consensus        23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   95 (262)
T 3rkr_A           23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK-------LRAVEREIVAAGGEAESHACDLSHSDAIAA   95 (262)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHHhCCceeEEEecCCCHHHHHH
Confidence            4677999999999999999999999999999999999998764       345667777778899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+......                                                     
T Consensus        96 ~~~~~~~~~g~id~lv~~Ag~~~~~~~-----------------------------------------------------  122 (262)
T 3rkr_A           96 FATGVLAAHGRCDVLVNNAGVGWFGGP-----------------------------------------------------  122 (262)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCSSC-----------------------------------------------------
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCCC-----------------------------------------------------
Confidence            999999999999999999998432211                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           +.+.+.++|+.++++|+.|++.++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       123 -----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  195 (262)
T 3rkr_A          123 -----LHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP--VADGAAYTASKWGLNGLMTSAAE  195 (262)
T ss_dssp             -----GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC--CCCCchHHHHHHHHHHHHHHHHH
Confidence                 12788999999999999999999999999999988899999999999877  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEeh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD  308 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~  308 (406)
                      |++++||+||+|+||+ +.|++.......  .+..+..+|+|+|++++||+++.+.+++|++++..
T Consensus       196 e~~~~gi~v~~v~PG~-v~t~~~~~~~~~--~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          196 ELRQHQVRVSLVAPGS-VRTEFGVGLSAK--KSALGAIEPDDIADVVALLATQADQSFISEVLVRP  258 (262)
T ss_dssp             HHGGGTCEEEEEEECC-C------------------CCCHHHHHHHHHHHHTCCTTCCEEEEEEEC
T ss_pred             HhhhcCcEEEEEecCC-CcCCcccccccc--cccccCCCHHHHHHHHHHHhcCccccccCcEEecc
Confidence            9999999999999996 677665444322  34456789999999999999999999999998553

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-41  Score=315.09  Aligned_cols=233  Identities=24%  Similarity=0.364  Sum_probs=200.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecC--CChHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDI--RDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl--~~~~~v   80 (406)
                      +.+|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+ .+..++.+|+  ++.+++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~   81 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEAS-------LAEVSDQIKSAGQPQPLIIALNLENATAQQY   81 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTSCCCEEEECCTTTCCHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHH-------HHHHHHHHHhcCCCCceEEEeccccCCHHHH
Confidence            457899999999999999999999999999999999998764       344566666655 4566677766  999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|+||||||+......                                                   
T Consensus        82 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~---------------------------------------------------  110 (247)
T 3i1j_A           82 RELAARVEHEFGRLDGLLHNASIIGPRTP---------------------------------------------------  110 (247)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCSC---------------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCEEEECCccCCCCCC---------------------------------------------------
Confidence            99999999999999999999998643221                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                             +.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .+++..|++||+|+++|++++
T Consensus       111 -------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l  181 (247)
T 3i1j_A          111 -------LEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG--RANWGAYGVSKFATEGLMQTL  181 (247)
T ss_dssp             -------GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             -------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC--CCCcchhHHHHHHHHHHHHHH
Confidence                   23788999999999999999999999999999988899999999998877  478899999999999999999


Q ss_pred             HHhhcC-CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         241 AEEFKG-DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       241 a~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      +.|+++ +|||||+|+||+ +.|++.....+.  ....+..+|+|+|++++||+++.++++||+.|.
T Consensus       182 a~e~~~~~~i~v~~v~PG~-v~t~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~  245 (247)
T 3i1j_A          182 ADELEGVTAVRANSINPGA-TRTGMRAQAYPD--ENPLNNPAPEDIMPVYLYLMGPDSTGINGQALN  245 (247)
T ss_dssp             HHHHTTTSSEEEEEEECCC-CSSHHHHHHSTT--SCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcCCCCeEEEEEecCc-ccCccchhcccc--cCccCCCCHHHHHHHHHHHhCchhccccCeeec
Confidence            999977 899999999996 677666554433  233567899999999999999999999999984

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-42  Score=327.06  Aligned_cols=242  Identities=24%  Similarity=0.350  Sum_probs=202.3

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC---eeeeeeecCCChHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG---NCLPCIVDIRDEHA   79 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~---~~~~~~~Dl~~~~~   79 (406)
                      .|++|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.   ++.++.+|++|+++
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~   92 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDR-------LEETKQQILKAGVPAEKINAVVADVTEASG   92 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCGGGEEEEECCTTSHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCCCceEEEEecCCCCHHH
Confidence            3567999999999999999999999999999999999998654       3345566666666   78999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      ++++++++.+++|++|+||||||+....+.                                                  
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~--------------------------------------------------  122 (297)
T 1xhl_A           93 QDDIINTTLAKFGKIDILVNNAGANLADGT--------------------------------------------------  122 (297)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCSC--------------------------------------------------
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCcCcCCCC--------------------------------------------------
Confidence            999999999999999999999997654320                                                  


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                             .+.+.+.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+. .++...|++||+|+++|+++
T Consensus       123 -------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~-~~~~~~Y~asKaa~~~l~~~  193 (297)
T 1xhl_A          123 -------ANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA-HSGYPYYACAKAALDQYTRC  193 (297)
T ss_dssp             -------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC-CTTSHHHHHHHHHHHHHHHH
T ss_pred             -------ccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC-CCCcchHHHHHHHHHHHHHH
Confidence                   012788999999999999999999999999999877 999999999887652 16788999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhc---------------CCCcccccccCChhhHHHHHHHhhcCC-CCCccce
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLT---------------GGSADAKATSRKPEIMADAAYYILSSN-PPSLTGQ  303 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~---------------~~~~~~~~~~~~pe~vA~~v~~L~s~~-~~~~tG~  303 (406)
                      ++.|++++||+||+|+||+ +.|++.+...               -....+..++.+|+|+|++++||+++. ++++||+
T Consensus       194 la~el~~~gI~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~  272 (297)
T 1xhl_A          194 TAIDLIQHGVRVNSVSPGA-VATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQ  272 (297)
T ss_dssp             HHHHHGGGTCEEEEEEECC-BCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSC
T ss_pred             HHHHhcccCeEEEEEeeCC-CcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCc
Confidence            9999999999999999996 5555543320               001124456789999999999999987 8899999


Q ss_pred             EE-EehhHH
Q psy6113         304 FL-IDDEVL  311 (406)
Q Consensus       304 ~i-~d~g~~  311 (406)
                      .+ +|+|..
T Consensus       273 ~i~vdGG~~  281 (297)
T 1xhl_A          273 SIVADGGST  281 (297)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECCCcc
Confidence            99 777754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=7.9e-42  Score=320.42  Aligned_cols=236  Identities=22%  Similarity=0.283  Sum_probs=198.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.++.+|++|++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   75 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREK-------LEAAASRIASLVSGAQVDIVAGDIREPGDIDR   75 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHSTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCCCeEEEEEccCCCHHHHHH
Confidence            46899999999999999999999999999999999998653       23344455433  3378899999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+| +|+||||||+....+.                                                     
T Consensus        76 ~~~~~~~~~g-id~lv~~Ag~~~~~~~-----------------------------------------------------  101 (260)
T 2z1n_A           76 LFEKARDLGG-ADILVYSTGGPRPGRF-----------------------------------------------------  101 (260)
T ss_dssp             HHHHHHHTTC-CSEEEECCCCCCCBCG-----------------------------------------------------
T ss_pred             HHHHHHHhcC-CCEEEECCCCCCCCCc-----------------------------------------------------
Confidence            9999999999 9999999997644332                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.
T Consensus       102 ------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~  173 (260)
T 2z1n_A          102 ------MELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP--WQDLALSNIMRLPVIGVVRTLAL  173 (260)
T ss_dssp             ------GGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTBHHHHHHTHHHHHHHHHHHH
T ss_pred             ------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC--CCCCchhHHHHHHHHHHHHHHHH
Confidence                  2788999999999999999999999999999988899999999998876  47789999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHH----------HhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIE----------MLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~----------~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      |++++||+||+|+||+ +.|++.+          .....       ...+..++.+|+|+|++++||+++.++++||+++
T Consensus       174 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i  252 (260)
T 2z1n_A          174 ELAPHGVTVNAVLPSL-ILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVI  252 (260)
T ss_dssp             HHGGGTEEEEEEEECH-HHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHhhhCeEEEEEEECC-cccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEE
Confidence            9999999999999996 5554422          11111       0124456779999999999999988899999999


Q ss_pred             -EehhH
Q psy6113         306 -IDDEV  310 (406)
Q Consensus       306 -~d~g~  310 (406)
                       +|+|+
T Consensus       253 ~vdGG~  258 (260)
T 2z1n_A          253 PVDGGA  258 (260)
T ss_dssp             EESTTT
T ss_pred             EeCCCc
Confidence             77764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-42  Score=323.62  Aligned_cols=243  Identities=23%  Similarity=0.336  Sum_probs=202.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC---eeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG---NCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~---~~~~~~~Dl~~~~~v   80 (406)
                      |.+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.   ++.++.+|++|++++
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER-------LEETRQIILKSGVSEKQVNSVVADVTTEDGQ   73 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHcCCCCcceEEEEecCCCHHHH
Confidence            346899999999999999999999999999999999998654       3345556665555   789999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+....+..                                                  
T Consensus        74 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~--------------------------------------------------  103 (280)
T 1xkq_A           74 DQIINSTLKQFGKIDVLVNNAGAAIPDAFG--------------------------------------------------  103 (280)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTC--------------------------------------------------
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCCC--------------------------------------------------
Confidence            999999999999999999999986543210                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                           ..+.+.+.++|++++++|+.+++.++++++|+|++++ ++||++||..+..+. .++...|++||+++++|++++
T Consensus       104 -----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-~~~~~~Y~asK~a~~~~~~~l  176 (280)
T 1xkq_A          104 -----TTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA-QPDFLYYAIAKAALDQYTRST  176 (280)
T ss_dssp             -----CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-CCSSHHHHHHHHHHHHHHHHH
T ss_pred             -----cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-CCcccHHHHHHHHHHHHHHHH
Confidence                 0022788899999999999999999999999998877 999999999887652 267889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhc---------------CCCcccccccCChhhHHHHHHHhhcCC-CCCccceE
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLT---------------GGSADAKATSRKPEIMADAAYYILSSN-PPSLTGQF  304 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~---------------~~~~~~~~~~~~pe~vA~~v~~L~s~~-~~~~tG~~  304 (406)
                      +.|++++||+||+|+||+ +.|++.....               -....+..++.+|+|+|++++||+++. ++++||+.
T Consensus       177 a~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~  255 (280)
T 1xkq_A          177 AIDLAKFGIRVNSVSPGM-VETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQS  255 (280)
T ss_dssp             HHHHHTTTCEEEEEEECC-BCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCE
T ss_pred             HHHhccCCeEEEEEeeCc-CcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCe
Confidence            999999999999999996 5555543220               001124456789999999999999987 88999999


Q ss_pred             E-EehhHH
Q psy6113         305 L-IDDEVL  311 (406)
Q Consensus       305 i-~d~g~~  311 (406)
                      + +|+|..
T Consensus       256 i~vdgG~~  263 (280)
T 1xkq_A          256 IVADGGTS  263 (280)
T ss_dssp             EEESTTGG
T ss_pred             EEECCCcc
Confidence            9 777765

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=7.9e-42  Score=323.56  Aligned_cols=238  Identities=23%  Similarity=0.320  Sum_probs=203.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG-------LRTTLKELREAGVEADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            457899999999999999999999999999999999998653       3345566666678899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+.                                                      
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~------------------------------------------------------  115 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPGGGAT------------------------------------------------------  115 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCG------------------------------------------------------
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            99999999999999999998654332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHH--hHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY--LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~--m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                           .+.+.++|++++++|+.++++++++++|.  |++++.++||++||..+..+  .++...|++||+++++|+++++
T Consensus       116 -----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la  188 (277)
T 2rhc_B          116 -----AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG--VVHAAPYSASKHGVVGFTKALG  188 (277)
T ss_dssp             -----GGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC--CCCCccHHHHHHHHHHHHHHHH
Confidence                 27889999999999999999999999999  98887899999999988876  4778999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhc----C-------C------CcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLT----G-------G------SADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~----~-------~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      .|++++||+||+|+||+ +.|++.....    .       .      ...+..++.+|+|+|++++||+++.++++||++
T Consensus       189 ~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~  267 (277)
T 2rhc_B          189 LELARTGITVNAVCPGF-VETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQA  267 (277)
T ss_dssp             HHHTTTEEEEEEEEECS-BCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHhCcEEEEEecCc-CcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcE
Confidence            99999999999999996 5555533221    0       0      011345678999999999999998889999999


Q ss_pred             E-EehhH
Q psy6113         305 L-IDDEV  310 (406)
Q Consensus       305 i-~d~g~  310 (406)
                      + +|+|+
T Consensus       268 ~~vdGG~  274 (277)
T 2rhc_B          268 LNVCGGL  274 (277)
T ss_dssp             EEESTTC
T ss_pred             EEECCCc
Confidence            9 77764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.2e-42  Score=323.93  Aligned_cols=238  Identities=19%  Similarity=0.265  Sum_probs=200.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+...      ...+...++...+.++.++.+|++|++++++++
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   94 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERND------HVSTWLMHERDAGRDFKAYAVDVADFESCERCA   94 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHH------HHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchH------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            34789999999999999999999999999999999865432      123344555666788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|+||||||+....+..                                                      
T Consensus        95 ~~~~~~~g~id~li~nAg~~~~~~~~------------------------------------------------------  120 (269)
T 3gk3_A           95 EKVLADFGKVDVLINNAGITRDATFM------------------------------------------------------  120 (269)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCBCTT------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCcCCCcchh------------------------------------------------------
Confidence            99999999999999999987554433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|+.++++|+.++++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.|+
T Consensus       121 -----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~  193 (269)
T 3gk3_A          121 -----KMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG--AFGQANYASAKAGIHGFTKTLALET  193 (269)
T ss_dssp             -----TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC--CCCcchHHHHHHHHHHHHHHHHHHh
Confidence                 789999999999999999999999999999988899999999988766  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++.+......       ..+..++.+|+|+|++++||+++.+.++||+.+ +|+|.
T Consensus       194 ~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          194 AKRGITVNTVSPGY-LATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             GGGTEEEEEEEECS-BCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTS
T ss_pred             hhcCCEEEEEecCc-ccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCE
Confidence            99999999999996 5665543322111       123456679999999999999999999999999 77764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-41  Score=316.11  Aligned_cols=233  Identities=26%  Similarity=0.345  Sum_probs=197.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |++|++|+++||||++|||+++|++|+++|++|++++|+.++ +       +..+++.    + .++.+|++|+++++++
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~-------~~~~~~~----~-~~~~~D~~~~~~~~~~   67 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-K-------EVAEAIG----G-AFFQVDLEDERERVRF   67 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-H-------HHHHHHT----C-EEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-H-------HHHHHhh----C-CEEEeeCCCHHHHHHH
Confidence            467899999999999999999999999999999999998753 1       2233332    3 7789999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+.                                                      
T Consensus        68 ~~~~~~~~g~iD~lv~~Ag~~~~~~~------------------------------------------------------   93 (256)
T 2d1y_A           68 VEEAAYALGRVDVLVNNAAIAAPGSA------------------------------------------------------   93 (256)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCT------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            99999999999999999998654333                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .++...|++||+++++|+++++.|
T Consensus        94 -----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  166 (256)
T 2d1y_A           94 -----LTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA--EQENAAYNASKGGLVNLTRSLALD  166 (256)
T ss_dssp             -----TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC--CCCChhHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999988899999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHh------cCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEML------TGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~------~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++....      .+..      ..+..++.+|+|+|++++||+++.++++||+.+ +|+|.
T Consensus       167 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          167 LAPLRIRVNAVAPGA-IATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGM  245 (256)
T ss_dssp             HGGGTEEEEEEEECS-BCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HhhcCeEEEEEeeCC-ccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            999999999999996 566554432      1110      123456789999999999999988889999988 77775


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       246 ~  246 (256)
T 2d1y_A          246 T  246 (256)
T ss_dssp             G
T ss_pred             c
Confidence            3

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.1e-41  Score=319.25  Aligned_cols=239  Identities=24%  Similarity=0.340  Sum_probs=202.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   81 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN-------VDRTVATLQGEGLSVTGTVCHVGKAEDRERL   81 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            456899999999999999999999999999999999998653       3345566666677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+.....                                                       
T Consensus        82 ~~~~~~~~g~iD~lv~~Ag~~~~~~-------------------------------------------------------  106 (260)
T 2zat_A           82 VAMAVNLHGGVDILVSNAAVNPFFG-------------------------------------------------------  106 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCB-------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999999753211                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|
T Consensus       107 ---~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  181 (260)
T 2zat_A          107 ---NIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP--FPNLGPYNVSKTALLGLTKNLAVE  181 (260)
T ss_dssp             ---CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence               112778899999999999999999999999999888899999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++........        ..+..++.+|+|+|++++||+++.++++||+.+ +|+|.
T Consensus       182 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          182 LAPRNIRVNCLAPGL-IKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             HGGGTEEEEEEEECS-BCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             hcccCeEEEEEEECc-ccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence            999999999999996 4554432211110        113456789999999999999988899999998 77663

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=317.33  Aligned_cols=233  Identities=21%  Similarity=0.350  Sum_probs=198.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++   +.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~   71 (253)
T 1hxh_A            2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAA-------GQQLAAEL---GERSMFVRHDVSSEADWTLVM   71 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHH-------HHHHHHHH---CTTEEEECCCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHc---CCceEEEEccCCCHHHHHHHH
Confidence            47899999999999999999999999999999999997643       22233333   667889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|++|+||||||+....+.                                                       
T Consensus        72 ~~~~~~~g~id~lv~~Ag~~~~~~~-------------------------------------------------------   96 (253)
T 1hxh_A           72 AAVQRRLGTLNVLVNNAGILLPGDM-------------------------------------------------------   96 (253)
T ss_dssp             HHHHHHHCSCCEEEECCCCCCCBCT-------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCc-------------------------------------------------------
Confidence            9999999999999999998654333                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.+++.++++++|.|++++ ++||++||..+..+  .++...|++||+++++|+++++.|+
T Consensus        97 ----~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  169 (253)
T 1hxh_A           97 ----ETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP--IEQYAGYSASKAAVSALTRAAALSC  169 (253)
T ss_dssp             ----TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----ccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC--CCCCccHHHHHHHHHHHHHHHHHHh
Confidence                2788999999999999999999999999999887 99999999998876  4788999999999999999999999


Q ss_pred             cCC--CeEEEEecchhhhhHHHHHHhcC-CC----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGD--NIAVNALWPRTAIYTAAIEMLTG-GS----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~--gI~vn~v~PG~~~~t~~~~~~~~-~~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++  ||+||+|+||+ +.|++...... ..          ..+..++.+|+|+|++++||+++.++++||+++ +|+|+
T Consensus       170 ~~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          170 RKQGYAIRVNSIHPDG-IYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHTCCEEEEEEEESE-ECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             hhcCCCeEEEEEEeCC-ccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            988  99999999996 56666544211 10          123345679999999999999998899999999 77764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.6e-42  Score=324.53  Aligned_cols=234  Identities=22%  Similarity=0.306  Sum_probs=187.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|++|++|||||++|||+++|++|+++|++|++++|+.+             +.....+.++.++.+|++|+++++++
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-------------~~~~~~~~~~~~~~~D~~~~~~v~~~   70 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE-------------DVVADLGDRARFAAADVTDEAAVASA   70 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH-------------HHHHHTCTTEEEEECCTTCHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH-------------HHHHhcCCceEEEECCCCCHHHHHHH
Confidence            46799999999999999999999999999999999999532             12233467899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+ +|++|+||||||+.......                                                     
T Consensus        71 ~~~~~~-~g~id~lv~nAg~~~~~~~~-----------------------------------------------------   96 (257)
T 3tl3_A           71 LDLAET-MGTLRIVVNCAGTGNAIRVL-----------------------------------------------------   96 (257)
T ss_dssp             HHHHHH-HSCEEEEEECGGGSHHHHHH-----------------------------------------------------
T ss_pred             HHHHHH-hCCCCEEEECCCCCCCcccc-----------------------------------------------------
Confidence            998877 99999999999986432211                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHh--------cCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK--------SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--------~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~  235 (406)
                        .+..+.+.++|++++++|+.++++++++++|+|++        ++.|+||++||..+..+  .+++..|++||+|+++
T Consensus        97 --~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~  172 (257)
T 3tl3_A           97 --SRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG--QIGQAAYSASKGGVVG  172 (257)
T ss_dssp             --HHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC--HHHHHHHHHHHHHHHH
T ss_pred             --cccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC--CCCCccHHHHHHHHHH
Confidence              01125889999999999999999999999999998        56789999999999877  4778999999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC------Ccccc-cccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      |+++++.|++++||+||+|+||+ +.|++.+...+.      ...+. .++.+|+|+|++++||+++  +++||+.+ +|
T Consensus       173 ~~~~la~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vd  249 (257)
T 3tl3_A          173 MTLPIARDLASHRIRVMTIAPGL-FDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLD  249 (257)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECS-BCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEES
T ss_pred             HHHHHHHHhcccCcEEEEEEecC-ccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEEC
Confidence            99999999999999999999996 556443322110      01133 6778999999999999986  79999999 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      ||+.
T Consensus       250 GG~~  253 (257)
T 3tl3_A          250 GAIR  253 (257)
T ss_dssp             TTC-
T ss_pred             CCcc
Confidence            7754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=5.1e-41  Score=313.15  Aligned_cols=227  Identities=20%  Similarity=0.271  Sum_probs=187.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|++|+++||||++|||+++|++|+++|++|++++|+.+. +              ..+  +.++.+|++|++++++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~--------------~~~--~~~~~~D~~d~~~~~~~~   65 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-E--------------QYP--FATEVMDVADAAQVAQVC   65 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-S--------------CCS--SEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-h--------------cCC--ceEEEcCCCCHHHHHHHH
Confidence            56899999999999999999999999999999999998652 1              112  677889999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|++|+||||||+....+.                                                       
T Consensus        66 ~~~~~~~g~id~lv~~Ag~~~~~~~-------------------------------------------------------   90 (250)
T 2fwm_X           66 QRLLAETERLDALVNAAGILRMGAT-------------------------------------------------------   90 (250)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCT-------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCc-------------------------------------------------------
Confidence            9999999999999999998654333                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||++++.|+++++.|+
T Consensus        91 ----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  164 (250)
T 2fwm_X           91 ----DQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP--RIGMSAYGASKAALKSLALSVGLEL  164 (250)
T ss_dssp             ----TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----ccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC--CCCCchHHHHHHHHHHHHHHHHHHh
Confidence                2788999999999999999999999999999988899999999998876  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhc------C-CC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLT------G-GS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~------~-~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      +++||+||+|+||+ +.|++.+...      . ..         ..+..++.+|+|+|++++||+++.++++||+.+ +|
T Consensus       165 ~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vd  243 (250)
T 2fwm_X          165 AGSGVRCNVVSPGS-TDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVD  243 (250)
T ss_dssp             GGGTCEEEEEEECC-C------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CccCCEEEEEECCc-ccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            99999999999996 5665543211      0 00         123456789999999999999998899999999 77


Q ss_pred             hhH
Q psy6113         308 DEV  310 (406)
Q Consensus       308 ~g~  310 (406)
                      +|.
T Consensus       244 GG~  246 (250)
T 2fwm_X          244 GGS  246 (250)
T ss_dssp             TTT
T ss_pred             CCc
Confidence            764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=6.5e-41  Score=315.08  Aligned_cols=241  Identities=21%  Similarity=0.256  Sum_probs=204.3

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v   80 (406)
                      +++++||+++||||+  +|||+++|++|+++|++|++++|+.+..      .++..+++. ..+.++.++.+|++|++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v   88 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG------AEENVKELEKTYGIKAKAYKCQVDSYESC   88 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSH------HHHHHHHHHHHHCCCEECCBCCTTCHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchh------HHHHHHHHHHhcCCceeEEecCCCCHHHH
Confidence            357899999999999  9999999999999999999999987652      123344443 3478899999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.+++||+||||||+....+..                                                  
T Consensus        89 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~--------------------------------------------------  118 (267)
T 3gdg_A           89 EKLVKDVVADFGQIDAFIANAGATADSGIL--------------------------------------------------  118 (267)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCCSCTT--------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcc--------------------------------------------------
Confidence            999999999999999999999987654433                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                               +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+...++...|++||+|+++|++++
T Consensus       119 ---------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  189 (267)
T 3gdg_A          119 ---------DGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSL  189 (267)
T ss_dssp             ---------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred             ---------cCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHH
Confidence                     88999999999999999999999999999999889999999998877643357889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcC------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTG------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|+++. |+||+|+||+ +.|++.+...+      ....+..++.+|+|+|++++||+++.++++||+.+ +|+|+.
T Consensus       190 a~e~~~~-i~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          190 ANEWRDF-ARVNSISPGY-IDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHTTTT-CEEEEEEECC-EECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             HHHhccC-cEEEEEECCc-cccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            9999887 9999999996 55544322111      01134566778999999999999999999999999 787764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.3e-41  Score=322.04  Aligned_cols=247  Identities=22%  Similarity=0.306  Sum_probs=196.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC-CCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCC----h
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA-EPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRD----E   77 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~-~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~----~   77 (406)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+. ++       +++..+++. ..+.++.++.+|+++    +
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~   90 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEA-------AVSLADELNKERSNTAVVCQADLTNSNVLP   90 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHH-------HHHHHHHHHHHSTTCEEEEECCCSCSTTHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHH-------HHHHHHHHHhhcCCceEEEEeecCCccCCH
Confidence            4578999999999999999999999999999999999987 43       334555555 457789999999999    9


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      ++++++++++.+.+|++|+||||||+....+....+..                                          
T Consensus        91 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~------------------------------------------  128 (288)
T 2x9g_A           91 ASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHE------------------------------------------  128 (288)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC---------------------------------------------
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccch------------------------------------------
Confidence            99999999999999999999999998754433100000                                          


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC------CCeEEEeCCCCCCCCCccCCchhhhHhhH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN------HAHILNISPPLNLNPFWFKNHVAYTISKY  231 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~------~g~Iv~vsS~~~~~~~~~~~~~~Y~asKa  231 (406)
                             .......+.++|++++++|+.+++.++++++|+|++++      .|+||++||..+..+  .+++..|++||+
T Consensus       129 -------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKa  199 (288)
T 2x9g_A          129 -------DNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP--CMAFSLYNMGKH  199 (288)
T ss_dssp             ------------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSC--CTTCHHHHHHHH
T ss_pred             -------hcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCC--CCCCchHHHHHH
Confidence                   00000278899999999999999999999999998876      789999999999876  478899999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHH------HHhcCCCccccccc-CChhhHHHHHHHhhcCCCCCccceE
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAI------EMLTGGSADAKATS-RKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~------~~~~~~~~~~~~~~-~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      |+++|+++++.|++++||+||+|+||+ +.|++.      +.+..  ..+..++ .+|+|+|++++||+++.++++||++
T Consensus       200 a~~~l~~~la~e~~~~gI~vn~v~PG~-v~t~~~~~~~~~~~~~~--~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~  276 (288)
T 2x9g_A          200 ALVGLTQSAALELAPYGIRVNGVAPGV-SLLPVAMGEEEKDKWRR--KVPLGRREASAEQIADAVIFLVSGSAQYITGSI  276 (288)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESS-CSCCTTSCHHHHHHHHH--TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhccCeEEEEEEecc-ccCccccChHHHHHHHh--hCCCCCCCCCHHHHHHHHHHHhCccccCccCCE
Confidence            999999999999999999999999996 555440      01100  1234566 8999999999999999899999999


Q ss_pred             E-EehhHH
Q psy6113         305 L-IDDEVL  311 (406)
Q Consensus       305 i-~d~g~~  311 (406)
                      + +|+|+.
T Consensus       277 i~vdGG~~  284 (288)
T 2x9g_A          277 IKVDGGLS  284 (288)
T ss_dssp             EEESTTGG
T ss_pred             EEECcchh
Confidence            9 777753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=3.1e-41  Score=315.36  Aligned_cols=227  Identities=23%  Similarity=0.340  Sum_probs=189.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++                  ++.++.+|++|+++++++
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------------~~~~~~~Dl~d~~~v~~~   77 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------------GFLAVKCDITDTEQVEQA   77 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------TSEEEECCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------------cceEEEecCCCHHHHHHH
Confidence            45788999999999999999999999999999999999876532                  167789999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+.                                                      
T Consensus        78 ~~~~~~~~g~iD~lv~nAg~~~~~~~------------------------------------------------------  103 (253)
T 2nm0_A           78 YKEIEETHGPVEVLIANAGVTKDQLL------------------------------------------------------  103 (253)
T ss_dssp             HHHHHHHTCSCSEEEEECSCCTTTC-------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            99999999999999999998654332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+  .++...|++||+|++.|+++++.|
T Consensus       104 -----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  176 (253)
T 2nm0_A          104 -----MRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG--SAGQANYAASKAGLVGFARSLARE  176 (253)
T ss_dssp             -------CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC--CCCcHHHHHHHHHHHHHHHHHHHH
Confidence                 2778899999999999999999999999999988899999999998876  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+......      ..+..++.+|+|+|++++||+++.+.++||+++ +|+|.
T Consensus       177 ~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          177 LGSRNITFNVVAPGF-VDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             HCSSSEEEEEEEECS-BCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             hhhcCeEEEEEEeCc-CcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence            999999999999996 5666544322111      123456789999999999999998899999999 77764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=4e-42  Score=332.53  Aligned_cols=245  Identities=25%  Similarity=0.365  Sum_probs=203.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC---CCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH---PKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~---~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.+|+||++|||||++|||+++|++|+++|++|++++|+....   ....+.+++..+++...+.++.++.+|++|++++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            5679999999999999999999999999999999999872110   0112235566777888888999999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|+||+||||||+....++.                                                  
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~--------------------------------------------------  131 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIA--------------------------------------------------  131 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCCCGG--------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcc--------------------------------------------------
Confidence            999999999999999999999987554332                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC------CCeEEEeCCCCCCCCCccCCchhhhHhhHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN------HAHILNISPPLNLNPFWFKNHVAYTISKYGMS  234 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~------~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~  234 (406)
                               +.+.++|++++++|+.|+++++++++|+|++.+      .|+||++||..+..+  .+++..|++||+|++
T Consensus       132 ---------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaal~  200 (322)
T 3qlj_A          132 ---------NTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG--SVGQGNYSAAKAGIA  200 (322)
T ss_dssp             ---------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC--BTTCHHHHHHHHHHH
T ss_pred             ---------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC--CCCCccHHHHHHHHH
Confidence                     789999999999999999999999999998643      379999999988876  478899999999999


Q ss_pred             HHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-cc--cccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         235 MCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-AD--AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       235 ~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-~~--~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +|+++++.|++++||+||+|+|| + .|++.+...... ..  ...+..+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       201 ~l~~~la~e~~~~gI~vn~v~PG-~-~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~  278 (322)
T 3qlj_A          201 TLTLVGAAEMGRYGVTVNAIAPS-A-RTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGK  278 (322)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEEC-T-TSCCSCCSCCC--------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTE
T ss_pred             HHHHHHHHHhcccCcEEEEecCC-C-CCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            99999999999999999999999 4 443322211111 11  1123468999999999999999999999999 78776


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       279 ~  279 (322)
T 3qlj_A          279 I  279 (322)
T ss_dssp             E
T ss_pred             c
Confidence            4

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3e-41  Score=318.73  Aligned_cols=234  Identities=20%  Similarity=0.270  Sum_probs=183.3

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +|.++.+|++|||||++|||+++|++|+++|++|++++|+.++       +++..   ...+.++.++.+|++|++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~---~~~~~~~~~~~~Dv~d~~~v~~   91 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDA-------LQETA---AEIGDDALCVPTDVTDPDSVRA   91 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHH---HHHTSCCEEEECCTTSHHHHHH
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHH---HHhCCCeEEEEecCCCHHHHHH
Confidence            4667899999999999999999999999999999999998653       22223   3335788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+++|++|+||||||+.....                                                      
T Consensus        92 ~~~~~~~~~g~iD~lVnnAg~~~~~~------------------------------------------------------  117 (272)
T 4dyv_A           92 LFTATVEKFGRVDVLFNNAGTGAPAI------------------------------------------------------  117 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCSS------------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCC------------------------------------------------------
Confidence            99999999999999999999864321                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                          ++.+.+.++|++++++|+.|+++++++++|+|++++  .|+||++||..+..+  .++...|++||+|+++|++++
T Consensus       118 ----~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~l  191 (272)
T 4dyv_A          118 ----PMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP--RPYSAPYTATKHAITGLTKST  191 (272)
T ss_dssp             ----CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             ----ChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC--CCCchHHHHHHHHHHHHHHHH
Confidence                123789999999999999999999999999999876  689999999999987  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-----cccccccCChhhHHHHHHHhhcCCCCCccceEEEe
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-----ADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID  307 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-----~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d  307 (406)
                      +.|++++||+||+|+||+ +.|++.+......     ..+..++.+|+|+|++++||++.+.....+.+.++
T Consensus       192 a~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~  262 (272)
T 4dyv_A          192 SLDGRVHDIACGQIDIGN-ADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIM  262 (272)
T ss_dssp             HHHHGGGTEEEEEEEEEE-CC------------------------CHHHHHHHHHHHHHSCTTSCCCEEEEE
T ss_pred             HHHhCccCEEEEEEEECc-ccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEe
Confidence            999999999999999996 6776655433211     12445678999999999999997665555555444

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-42  Score=318.31  Aligned_cols=230  Identities=27%  Similarity=0.364  Sum_probs=193.1

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..   ...+  +.++.+|++|+++++++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~---~~~~--~~~~~~D~~~~~~~~~~~~   69 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP-------LREAA---EAVG--AHPVVMDVADPASVERGFA   69 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHH---HTTT--CEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHH---HHcC--CEEEEecCCCHHHHHHHHH
Confidence            5889999999999999999999999999999999997643       11122   2223  7788999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+++|++|+||||||+....+.                                                        
T Consensus        70 ~~~~~~g~id~lvn~Ag~~~~~~~--------------------------------------------------------   93 (245)
T 1uls_A           70 EALAHLGRLDGVVHYAGITRDNFH--------------------------------------------------------   93 (245)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCG--------------------------------------------------------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCh--------------------------------------------------------
Confidence            999999999999999998654332                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|++++++|+.++++++++++|+|++++.|+||++||.. ..+  .+++..|++||+++.+|+++++.|++
T Consensus        94 ---~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~--~~~~~~Y~asK~a~~~~~~~la~e~~  167 (245)
T 1uls_A           94 ---WKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLG--NLGQANYAASMAGVVGLTRTLALELG  167 (245)
T ss_dssp             ---GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGC--CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcC--CCCchhHHHHHHHHHHHHHHHHHHHh
Confidence               278899999999999999999999999999988889999999988 655  46789999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++||+||+|+||+ +.|++.+...+.      ...+..++.+|+|+|++++||+++.+.++||+.+ +|+|+
T Consensus       168 ~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          168 RWGIRVNTLAPGF-IETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             GGTEEEEEEEECS-BCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HhCeEEEEEEeCc-CcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            9999999999996 555442211000      0123456789999999999999988899999999 77765

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3e-41  Score=314.20  Aligned_cols=232  Identities=26%  Similarity=0.378  Sum_probs=197.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|+||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~   76 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEK-------LRALGDELTAAGAKVHVLELDVADRQGVDAAVA   76 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            5889999999999999999999999999999999998653       344566666667789999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.+|++|+||||||+....+.                                                        
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~--------------------------------------------------------  100 (247)
T 2jah_A           77 STVEALGGLDILVNNAGIMLLGPV--------------------------------------------------------  100 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCS--------------------------------------------------------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCch--------------------------------------------------------
Confidence            999999999999999998644333                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|++++++|+.|+++++++++|+|++++ |+||++||..+..+  .+++..|++||+|+++|+++++.|++
T Consensus       101 ---~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~  174 (247)
T 2jah_A          101 ---EDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN--VRNAAVYQATKFGVNAFSETLRQEVT  174 (247)
T ss_dssp             ---TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC--CCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence               3788999999999999999999999999999887 99999999998876  47889999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCC------ccccccc--CChhhHHHHHHHhhcCCCCCccceEEEeh
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATS--RKPEIMADAAYYILSSNPPSLTGQFLIDD  308 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~--~~pe~vA~~v~~L~s~~~~~~tG~~i~d~  308 (406)
                      ++||+||+|+||+ +.|++........      ..+ .+.  .+|+|+|++++||+++.+.++++++.++.
T Consensus       175 ~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~~  243 (247)
T 2jah_A          175 ERGVRVVVIEPGT-TDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEAVRYAVTAPHHATVHEIFIRP  243 (247)
T ss_dssp             GGTCEEEEEEECS-BSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEEEEEEE
T ss_pred             ccCcEEEEEECCC-CCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHHHHHHhCCCccCccceEEecC
Confidence            9999999999996 5565432211100      001 234  79999999999999998888888876553

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=4.8e-41  Score=312.88  Aligned_cols=227  Identities=22%  Similarity=0.330  Sum_probs=191.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|++|+++||||++|||+++|++|+++|++|++++|+.++.+++                  ..+.+|++|+++++++
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------------------~~~~~D~~~~~~~~~~   71 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------------FGVEVDVTDSDAVDRA   71 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS------------------EEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh------------------cCeeccCCCHHHHHHH
Confidence            4578999999999999999999999999999999999998765432                  1378999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+.                                                      
T Consensus        72 ~~~~~~~~g~id~lv~~Ag~~~~~~~------------------------------------------------------   97 (247)
T 1uzm_A           72 FTAVEEHQGPVEVLVSNAGLSADAFL------------------------------------------------------   97 (247)
T ss_dssp             HHHHHHHHSSCSEEEEECSCCC----------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            99999999999999999998644332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||+|++.|+++++.|
T Consensus        98 -----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  170 (247)
T 1uzm_A           98 -----MRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG--IGNQANYAASKAGVIGMARSIARE  170 (247)
T ss_dssp             ------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC--CCCChhHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999888899999999998876  467899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+.....      ...+..++.+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       171 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          171 LSKANVTANVVAPGY-IDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             HGGGTEEEEEEEECS-BCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             hhhcCcEEEEEEeCC-CcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence            999999999999996 566654432110      0123456789999999999999988899999999 77764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=6.5e-41  Score=318.14  Aligned_cols=238  Identities=20%  Similarity=0.328  Sum_probs=200.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|+||+++||||++|||+++|++|+++|++|++++|+.++      ..++..+++...+.++.++.+|+++.++++++
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   97 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE------SAEEVVAAIKKNGSDAACVKANVGVVEDIVRM   97 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH------HHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHH
Confidence            356889999999999999999999999999999999998642      12334556666788899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+.                                                      
T Consensus        98 ~~~~~~~~g~iD~lv~~Ag~~~~~~~------------------------------------------------------  123 (283)
T 1g0o_A           98 FEEAVKIFGKLDIVCSNSGVVSFGHV------------------------------------------------------  123 (283)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCG------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCc------------------------------------------------------
Confidence            99999999999999999998654332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.|+++++++++|+|  ++.|+||++||..+..+. .++...|++||+++++|+++++.|
T Consensus       124 -----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~-~~~~~~Y~asK~a~~~~~~~la~e  195 (283)
T 1g0o_A          124 -----KDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKA-VPKHAVYSGSKGAIETFARCMAID  195 (283)
T ss_dssp             -----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSS-CSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCC-CCCCcchHHHHHHHHHHHHHHHHH
Confidence                 278899999999999999999999999999  345899999999887663 134889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc----CC----C-----------cccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT----GG----S-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~----~~----~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      ++++||+||+|+||+ +.|++.+...    +.    .           ..+..++.+|+|+|++++||+++.++++||+.
T Consensus       196 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~  274 (283)
T 1g0o_A          196 MADKKITVNVVAPGG-IKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKV  274 (283)
T ss_dssp             HGGGTCEEEEEEECC-BSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             hcccCeEEEEEecCc-ccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCE
Confidence            999999999999996 5666654321    00    0           12345677999999999999999889999999


Q ss_pred             E-EehhH
Q psy6113         305 L-IDDEV  310 (406)
Q Consensus       305 i-~d~g~  310 (406)
                      + +|+|+
T Consensus       275 i~vdgG~  281 (283)
T 1g0o_A          275 IGIDGGA  281 (283)
T ss_dssp             EEESTTC
T ss_pred             EEeCCCc
Confidence            9 77764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=5.2e-41  Score=316.46  Aligned_cols=238  Identities=18%  Similarity=0.211  Sum_probs=195.1

Q ss_pred             CcccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.+|+||+++||||  ++|||+++|++|+++|++|++++|+.++          ..+++ ...+.++.++.+|++|++++
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~~Dv~~~~~v   71 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR----------LIQRITDRLPAKAPLLELDVQNEEHL   71 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH----------HHHHHHTTSSSCCCEEECCTTCHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH----------HHHHHHHhcCCCceEEEccCCCHHHH
Confidence            34689999999999  9999999999999999999999998642          11222 22355788899999999999


Q ss_pred             HHHHHHHHHhcC---CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          81 QSAVNAAVDKFG---GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        81 ~~~~~~i~~~~g---~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      +++++++.+.+|   ++|+||||||+.......                                               
T Consensus        72 ~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~-----------------------------------------------  104 (269)
T 2h7i_A           72 ASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMG-----------------------------------------------  104 (269)
T ss_dssp             HHHHHHHHHHHCTTCCEEEEEECCCCCCGGGST-----------------------------------------------
T ss_pred             HHHHHHHHHHhCCCCCceEEEECCccCcccccc-----------------------------------------------
Confidence            999999999999   999999999976421100                                               


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                             ..++.+.+.++|++++++|+.++++++++++|+|+++  |+||++||..+ .+  .+++..|++||+|+++|+
T Consensus       105 -------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~--~~~~~~Y~asKaa~~~l~  172 (269)
T 2h7i_A          105 -------INPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RA--MPAYNWMTVAKSALESVN  172 (269)
T ss_dssp             -------TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SC--CTTTHHHHHHHHHHHHHH
T ss_pred             -------ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cc--cCchHHHHHHHHHHHHHH
Confidence                   0122378899999999999999999999999999764  79999999876 33  467899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhcC----C--------------Cccccc-ccCChhhHHHHHHHhhcCCCC
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTG----G--------------SADAKA-TSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~----~--------------~~~~~~-~~~~pe~vA~~v~~L~s~~~~  298 (406)
                      ++++.|++++|||||+|+||+ +.|++.+....    .              ...|.. ++.+|+|+|++++||+|+.++
T Consensus       173 ~~la~e~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~  251 (269)
T 2h7i_A          173 RFVAREAGKYGVRSNLVAAGP-IRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLP  251 (269)
T ss_dssp             HHHHHHHHTTTCEEEEEEECC-CCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCT
T ss_pred             HHHHHHhcccCcEEEEEecCc-ccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999999999996 56665443211    0              012344 578999999999999999999


Q ss_pred             CccceEE-EehhHH
Q psy6113         299 SLTGQFL-IDDEVL  311 (406)
Q Consensus       299 ~~tG~~i-~d~g~~  311 (406)
                      ++||+.+ +|+|+.
T Consensus       252 ~itG~~i~vdGG~~  265 (269)
T 2h7i_A          252 ATTGDIIYADGGAH  265 (269)
T ss_dssp             TCCSEEEEESTTGG
T ss_pred             cCcceEEEecCCee
Confidence            9999999 777753

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-41  Score=317.97  Aligned_cols=237  Identities=25%  Similarity=0.371  Sum_probs=195.6

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |....+|+||+++||||++|||+++|++|+++|++|++++|+.++.           +++...-.++.++.+|++|++++
T Consensus         1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~~~~~~Dv~d~~~v   69 (270)
T 1yde_A            1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-----------RALEQELPGAVFILCDVTQEDDV   69 (270)
T ss_dssp             ---CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-----------HHHHHHCTTEEEEECCTTSHHHH
T ss_pred             CCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----------HHHHHHhcCCeEEEcCCCCHHHH
Confidence            5566789999999999999999999999999999999999976431           11222222478899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+.....                                                    
T Consensus        70 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~----------------------------------------------------   97 (270)
T 1yde_A           70 KTLVSETIRRFGRLDCVVNNAGHHPPPQ----------------------------------------------------   97 (270)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCC----------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCC----------------------------------------------------
Confidence            9999999999999999999999764321                                                    


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                            ++.+.+.++|++++++|+.++++++++++|+|+++ .++||++||..+..+  .++...|++||+++++|++++
T Consensus        98 ------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~l  168 (270)
T 1yde_A           98 ------RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIG--QAQAVPYVATKGAVTAMTKAL  168 (270)
T ss_dssp             ------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             ------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCC--CCCCcccHHHHHHHHHHHHHH
Confidence                  11278889999999999999999999999999876 489999999887665  367889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCC--C----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--S----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      +.|++++||+||+|+||+ +.|++.+.....  .          ..+..++.+|+|+|++++||+++ ++++||+.+ +|
T Consensus       169 a~e~~~~gi~vn~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~itG~~i~vd  246 (270)
T 1yde_A          169 ALDESPYGVRVNCISPGN-IWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVT  246 (270)
T ss_dssp             HHHHGGGTCEEEEEEECS-BCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEES
T ss_pred             HHHhhhhCcEEEEEEeCc-cccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCcCCCEEEEC
Confidence            999999999999999996 566655433211  0          12445678999999999999998 789999999 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      ||..
T Consensus       247 GG~~  250 (270)
T 1yde_A          247 GGAE  250 (270)
T ss_dssp             TTTT
T ss_pred             CCee
Confidence            7754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-41  Score=315.41  Aligned_cols=244  Identities=26%  Similarity=0.391  Sum_probs=195.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDT-------LRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFE   74 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHcCCceEEEECCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999998654       334556666667889999999999999999999


Q ss_pred             HHHHh-cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          86 AAVDK-FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        86 ~i~~~-~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ++.+. +|++|+||||||........                                                    ..
T Consensus        75 ~~~~~~~g~id~lvnnAg~g~~~~~~----------------------------------------------------~~  102 (260)
T 2qq5_A           75 QVDREQQGRLDVLVNNAYAGVQTILN----------------------------------------------------TR  102 (260)
T ss_dssp             HHHHHHTTCCCEEEECCCTTHHHHHH----------------------------------------------------TT
T ss_pred             HHHHhcCCCceEEEECCccccccccc----------------------------------------------------cC
Confidence            99887 89999999999632110000                                                    00


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                      ..++.+.+.++|+.++++|+.++++++++++|+|++++.|+||++||..+..+   .+...|++||+|+++|+++++.|+
T Consensus       103 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~  179 (260)
T 2qq5_A          103 NKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY---MFNVPYGVGKAACDKLAADCAHEL  179 (260)
T ss_dssp             TCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC---CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC---CCCCchHHHHHHHHHHHHHHHHHh
Confidence            11223788899999999999999999999999999888899999999988765   346899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCC-CCccceEEEehhHHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNP-PSLTGQFLIDDEVLK  312 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~-~~~tG~~i~d~g~~~  312 (406)
                      +++||+||+|+||+ +.|++........           ..+..+..+|+|+|++++||+++.+ .++||+++.+++..+
T Consensus       180 ~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~~~~~  258 (260)
T 2qq5_A          180 RRHGVSCVSLWPGI-VQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLAR  258 (260)
T ss_dssp             GGGTCEEEEEECCC-SCTTTC----------------------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHHHHHH
T ss_pred             ccCCeEEEEEecCc-cccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcccccccceeechhhhhh
Confidence            99999999999996 5665533211100           0122334589999999999999876 489999998776654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=322.93  Aligned_cols=251  Identities=17%  Similarity=0.176  Sum_probs=198.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChH---
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA-KTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEH---   78 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~-r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~---   78 (406)
                      |.+|++|++|||||++|||+++|++|+++|++|++++ |+.++       ++++.+++. ..+.++.++.+|+++++   
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~  113 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE-------ANALSATLNARRPNSAITVQADLSNVATAP  113 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHHSTTCEEEEECCCSSSCBCC
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhhcCCeEEEEEeeCCCchhcc
Confidence            3458999999999999999999999999999999999 87643       334455555 45678999999999999   


Q ss_pred             --------------HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHH
Q psy6113          79 --------------AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVN  144 (406)
Q Consensus        79 --------------~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (406)
                                    +++++++++.+.+|++|+||||||+....+..+.+.+.++..                        
T Consensus       114 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~------------------------  169 (328)
T 2qhx_A          114 VSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPC------------------------  169 (328)
T ss_dssp             -------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC---------------------------------
T ss_pred             ccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccc------------------------
Confidence                          999999999999999999999999875443331110000000                        


Q ss_pred             HHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC------CCeEEEeCCCCCCCCC
Q psy6113         145 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN------HAHILNISPPLNLNPF  218 (406)
Q Consensus       145 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~------~g~Iv~vsS~~~~~~~  218 (406)
                                           ....+.+.++|+.++++|+.+++.++++++|+|++++      .++||++||..+..+ 
T Consensus       170 ---------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~-  227 (328)
T 2qhx_A          170 ---------------------VGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP-  227 (328)
T ss_dssp             -------------------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC-
T ss_pred             ---------------------cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC-
Confidence                                 0001223889999999999999999999999999877      799999999999876 


Q ss_pred             ccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHH------HHHhcCCCccccc-ccCChhhHHHHHHH
Q psy6113         219 WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAA------IEMLTGGSADAKA-TSRKPEIMADAAYY  291 (406)
Q Consensus       219 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~------~~~~~~~~~~~~~-~~~~pe~vA~~v~~  291 (406)
                       .+++..|++||+|+++|+++|+.|++++||+||+|+||+ +.|++      .+.+..  ..+.. ++.+|+|+|++++|
T Consensus       228 -~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~--~~p~~~r~~~pedvA~~v~~  303 (328)
T 2qhx_A          228 -LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL-SVLVDDMPPAVWEGHRS--KVPLYQRDSSAAEVSDVVIF  303 (328)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS-BSCCCCSCHHHHHHHHT--TCTTTTSCBCHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc-ccCCccccHHHHHHHHh--hCCCCCCCCCHHHHHHHHHH
Confidence             478899999999999999999999999999999999996 55543      111111  12344 77899999999999


Q ss_pred             hhcCCCCCccceEE-EehhHH
Q psy6113         292 ILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       292 L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+++.+.++||+++ +|+|+.
T Consensus       304 l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          304 LCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhCccccCccCcEEEECCCcc
Confidence            99988899999999 777753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.2e-41  Score=314.76  Aligned_cols=238  Identities=27%  Similarity=0.342  Sum_probs=198.1

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.++++|++|+++||||++|||+++|++|+++|++|++++|+.+++       ++..   .....++.++.+|++|++++
T Consensus         4 m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~---~~~~~~~~~~~~D~~d~~~v   73 (263)
T 3ak4_A            4 MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAA-------QAVV---AGLENGGFAVEVDVTKRASV   73 (263)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHH---HTCTTCCEEEECCTTCHHHH
T ss_pred             cccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHH---HHHhcCCeEEEEeCCCHHHH
Confidence            4456778999999999999999999999999999999999986431       1122   22223677899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+....+..                                                  
T Consensus        74 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~--------------------------------------------------  103 (263)
T 3ak4_A           74 DAAMQKAIDALGGFDLLCANAGVSTMRPAV--------------------------------------------------  103 (263)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCGG--------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChh--------------------------------------------------
Confidence            999999999999999999999986543322                                                  


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                               +.+.++|+.++++|+.++++++++++|+|++++ .++||++||..+..+  .++...|++||++++.|+++
T Consensus       104 ---------~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~  172 (263)
T 3ak4_A          104 ---------DITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG--APLLAHYSASKFAVFGWTQA  172 (263)
T ss_dssp             ---------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHH
T ss_pred             ---------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC--CCCchhHHHHHHHHHHHHHH
Confidence                     788999999999999999999999999999877 799999999988876  46788999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhc-----------CC------CcccccccCChhhHHHHHHHhhcCCCCCccc
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLT-----------GG------SADAKATSRKPEIMADAAYYILSSNPPSLTG  302 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~-----------~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG  302 (406)
                      ++.|++++||+||+|+||+ +.|++.....           +.      ...+..++.+|+|+|++++||+++.++++||
T Consensus       173 la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG  251 (263)
T 3ak4_A          173 LAREMAPKNIRVNCVCPGF-VKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTG  251 (263)
T ss_dssp             HHHHHGGGTCEEEEEEECS-BTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHhHcCeEEEEEeccc-ccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            9999999999999999996 5565543211           00      0123456789999999999999988889999


Q ss_pred             eEE-EehhH
Q psy6113         303 QFL-IDDEV  310 (406)
Q Consensus       303 ~~i-~d~g~  310 (406)
                      +.+ +|+|+
T Consensus       252 ~~~~vdgG~  260 (263)
T 3ak4_A          252 QGINVTGGV  260 (263)
T ss_dssp             CEEEESSSS
T ss_pred             CEEEECcCE
Confidence            998 77764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.9e-41  Score=316.06  Aligned_cols=243  Identities=18%  Similarity=0.215  Sum_probs=194.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+.+..      .+...+.+...+.++.++.+|++|++++++++
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   76 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTA------METMKETYKDVEERLQFVQADVTKKEDLHKIV   76 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHTGGGGGGEEEEECCTTSHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHH------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            356789999999999999999999999999999998876431      22334444455678999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|+||||||+.....                                                        
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~--------------------------------------------------------  100 (264)
T 3i4f_A           77 EEAMSHFGKIDFLINNAGPYVFER--------------------------------------------------------  100 (264)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCSC--------------------------------------------------------
T ss_pred             HHHHHHhCCCCEEEECCcccccCC--------------------------------------------------------
Confidence            999999999999999999532111                                                        


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                       .++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||.......++++...|++||+|+++|+++++.|+
T Consensus       101 -~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~  179 (264)
T 3i4f_A          101 -KKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEE  179 (264)
T ss_dssp             -CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence             1123788999999999999999999999999999998899999999843311224678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhc------CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLT------GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~------~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++||+||+|+||+ +.|++.+...      .....+..++.+|+|+|++++||+++.+.++||+++ +|||+.
T Consensus       180 ~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~  252 (264)
T 3i4f_A          180 AEYGITANMVCPGD-IIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVD  252 (264)
T ss_dssp             GGGTEEEEEEEECC-CCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCC
T ss_pred             hhcCcEEEEEccCC-ccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCcee
Confidence            99999999999996 5554422111      111235567889999999999999998999999999 777654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=7.9e-41  Score=313.80  Aligned_cols=234  Identities=23%  Similarity=0.355  Sum_probs=198.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.++       .++..+++   ..++.++.+|++|++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~   72 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEE-------GKAMAAEL---ADAARYVHLDVTQPAQWKAAV   72 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHT---GGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHh---hcCceEEEecCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998653       12222222   235788999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|++|+||||||+....+.                                                       
T Consensus        73 ~~~~~~~g~iD~lv~~Ag~~~~~~~-------------------------------------------------------   97 (260)
T 1nff_A           73 DTAVTAFGGLHVLVNNAGILNIGTI-------------------------------------------------------   97 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCT-------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999998654333                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+++++|+++++.|+
T Consensus        98 ----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  171 (260)
T 1nff_A           98 ----EDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG--TVACHGYTATKFAVRGLTKSTALEL  171 (260)
T ss_dssp             ----TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC--CCCchhHHHHHHHHHHHHHHHHHHh
Confidence                2788999999999999999999999999999988899999999998876  4678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC--cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS--ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~--~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++||+||+|+||+ +.|++.+ .....  ..+..++.+|+|+|++++||+++.+.++||+.+ +|+|..
T Consensus       172 ~~~gi~v~~v~Pg~-v~t~~~~-~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          172 GPSGIRVNSIHPGL-VKTPMTD-WVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             GGGTEEEEEEEECC-BCSGGGT-TSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CccCcEEEEEEeCC-CCCCccc-cchhhHHhCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            99999999999996 5565433 11110  124456789999999999999988899999998 777754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.9e-41  Score=311.20  Aligned_cols=225  Identities=18%  Similarity=0.211  Sum_probs=185.2

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++   +.++.++.+|++|++++++++++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~   70 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQR-------LQQQELLL---GNAVIGIVADLAHHEDVDVAFAA   70 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHH---GGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHh---cCCceEEECCCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999998654       22333333   33688999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.+|++|+||||||+....+.                                                         
T Consensus        71 ~~~~~g~id~lvnnAg~~~~~~~---------------------------------------------------------   93 (235)
T 3l6e_A           71 AVEWGGLPELVLHCAGTGEFGPV---------------------------------------------------------   93 (235)
T ss_dssp             HHHHHCSCSEEEEECCCC--------------------------------------------------------------
T ss_pred             HHHhcCCCcEEEECCCCCCCCCh---------------------------------------------------------
Confidence            99999999999999998654333                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                        .+.+.++|++++++|+.|+++++++++|+|++++ ++||++||..+..+  .++...|++||+|+++|+++++.|+++
T Consensus        94 --~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~  168 (235)
T 3l6e_A           94 --GVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVG--KANESLYCASKWGMRGFLESLRAELKD  168 (235)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSS--CSSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             --HhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCC--CCCCcHHHHHHHHHHHHHHHHHHHhhc
Confidence              2889999999999999999999999999998876 59999999999887  478899999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhc-CCCCCccceEEEe
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILS-SNPPSLTGQFLID  307 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s-~~~~~~tG~~i~d  307 (406)
                      +|||||+|+||+ +.|++.+....   .+..++.+|+|+|+.++||++ +.+.+++|-.+.+
T Consensus       169 ~gi~v~~v~PG~-v~T~~~~~~~~---~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~~  226 (235)
T 3l6e_A          169 SPLRLVNLYPSG-IRSEFWDNTDH---VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGR  226 (235)
T ss_dssp             SSEEEEEEEEEE-ECCCC--------------CBCHHHHHHHHHHHTCCCSSEEEEEEEEEE
T ss_pred             cCCEEEEEeCCC-ccCcchhccCC---CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEec
Confidence            999999999996 56655443322   234577899999999999998 6677888877754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.7e-41  Score=318.94  Aligned_cols=233  Identities=21%  Similarity=0.292  Sum_probs=188.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCe-eeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN-CLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.. +.++.+|++|+++++++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  101 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDV-------LDAAAGEIGGRTGNIVRAVVCDVGDPDQVAAL  101 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHH
Confidence            46899999999999999999999999999999999998764       33455555554444 48999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+.....                                                       
T Consensus       102 ~~~~~~~~g~iD~lvnnAG~~~~~~-------------------------------------------------------  126 (281)
T 4dry_A          102 FAAVRAEFARLDLLVNNAGSNVPPV-------------------------------------------------------  126 (281)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCC-------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999999764321                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                         ++.+.+.++|++++++|+.|+++++++++|+|++++  .|+||++||..+..+  .+++..|++||+|+++|+++++
T Consensus       127 ---~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la  201 (281)
T 4dry_A          127 ---PLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP--RPNSAPYTATKHAITGLTKSTA  201 (281)
T ss_dssp             ---CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ---CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC--CCCChhHHHHHHHHHHHHHHHH
Confidence               123789999999999999999999999999999875  689999999999877  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC-----CcccccccCChhhHHHHHHHhhcCCCC-CccceEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG-----SADAKATSRKPEIMADAAYYILSSNPP-SLTGQFL  305 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-----~~~~~~~~~~pe~vA~~v~~L~s~~~~-~~tG~~i  305 (406)
                      .|++++||+||+|+||+ +.|++.+.....     ...+..+..+|||+|++++||++.+.. .+++..+
T Consensus       202 ~e~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~~~~i  270 (281)
T 4dry_A          202 LDGRMHDIACGQIDIGN-AATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVLTMTV  270 (281)
T ss_dssp             HHHGGGTEEEEEEEEEC-BCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             HHhcccCeEEEEEEECc-CcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccCccccEEE
Confidence            99999999999999996 677666544321     112445678999999999999986544 4444444

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-41  Score=318.95  Aligned_cols=233  Identities=27%  Similarity=0.372  Sum_probs=192.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|++|+++||||++|||+++|++|+++|++|++++|+.+++       ++.   .+....++.++.+|++|+++++++
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~---~~~~~~~~~~~~~D~~~~~~v~~~   70 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL-------AEA---VAALEAEAIAVVADVSDPKAVEAV   70 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHH---HHTCCSSEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHH---HHHhcCceEEEEcCCCCHHHHHHH
Confidence            3568999999999999999999999999999999999986431       122   222345788999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+..                                                     
T Consensus        71 ~~~~~~~~g~iD~lvnnAg~~~~~~~~-----------------------------------------------------   97 (263)
T 2a4k_A           71 FAEALEEFGRLHGVAHFAGVAHSALSW-----------------------------------------------------   97 (263)
T ss_dssp             HHHHHHHHSCCCEEEEGGGGTTTTC-------------------------------------------------------
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChh-----------------------------------------------------
Confidence            999999999999999999986543332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.++++++++++|+| ++ .|+||++||..+. +  .++...|++||+++++|+++++.|
T Consensus        98 ------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~--~~~~~~Y~asK~a~~~~~~~la~e  166 (263)
T 2a4k_A           98 ------NLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-G--AFGLAHYAAGKLGVVGLARTLALE  166 (263)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-C--HHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-C--CCCcHHHHHHHHHHHHHHHHHHHH
Confidence                  78899999999999999999999999999 54 6999999999988 5  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++||+||+|+||+ +.|++.+...+.      ...+..++.+|+|+|++++||+++.++++||+++ +|+|..
T Consensus       167 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          167 LARKGVRVNVLLPGL-IQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             HTTTTCEEEEEEECS-BCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hhhhCcEEEEEEeCc-CcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCcc
Confidence            999999999999996 555443221000      0123456789999999999999998899999999 777653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.2e-40  Score=311.50  Aligned_cols=227  Identities=24%  Similarity=0.340  Sum_probs=196.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+|++|++|||||++|||+++|++|+++|++|++++|+.++                  +.++.++.+|++|+++++++
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------------~~~~~~~~~Dl~~~~~v~~~   64 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------------EAKYDHIECDVTNPDQVKAS   64 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------------SCSSEEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------------CCceEEEEecCCCHHHHHHH
Confidence            457899999999999999999999999999999999998653                  34578899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+.                                                      
T Consensus        65 ~~~~~~~~g~iD~lv~~Ag~~~~~~~------------------------------------------------------   90 (264)
T 2dtx_A           65 IDHIFKEYGSISVLVNNAGIESYGKI------------------------------------------------------   90 (264)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCT------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCc------------------------------------------------------
Confidence            99999999999999999998654333                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||++++.|+++++.|
T Consensus        91 -----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  163 (264)
T 2dtx_A           91 -----ESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII--TKNASAYVTSKHAVIGLTKSIALD  163 (264)
T ss_dssp             -----TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence                 3788999999999999999999999999999988899999999998876  477899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc------CC----C-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT------GG----S-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~------~~----~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      ++++ |+||+|+||+ +.|++.....      ..    .       ..+..++.+|+|+|++++||+++.++++||+++ 
T Consensus       164 ~~~~-i~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  241 (264)
T 2dtx_A          164 YAPL-LRCNAVCPAT-IDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLY  241 (264)
T ss_dssp             HTTT-SEEEEEEECS-BCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hcCC-cEEEEEEeCC-CcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEE
Confidence            9998 9999999996 5665544321      10    0       113456789999999999999988899999999 


Q ss_pred             EehhHH
Q psy6113         306 IDDEVL  311 (406)
Q Consensus       306 ~d~g~~  311 (406)
                      +|+|..
T Consensus       242 vdGG~~  247 (264)
T 2dtx_A          242 VDGGLS  247 (264)
T ss_dssp             ESTTGG
T ss_pred             ECCCcc
Confidence            777653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.1e-41  Score=314.58  Aligned_cols=229  Identities=24%  Similarity=0.297  Sum_probs=188.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ||+++||||++|||+++|++|+++|  ++|++.+|+.++       +++..+   ..+.++.++.+|++|++++++++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~-------~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP-------LKKLKE---KYGDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHH-------HHHHHH---HHGGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHH-------HHHHHH---HhCCceEEEECCCCCHHHHHHHHHH
Confidence            7999999999999999999999996  688888887653       222222   2366899999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+++|++|+||||||+.....                                                          
T Consensus        72 ~~~~~g~id~lvnnAg~~~~~~----------------------------------------------------------   93 (254)
T 3kzv_A           72 AVKGHGKIDSLVANAGVLEPVQ----------------------------------------------------------   93 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCT----------------------------------------------------------
T ss_pred             HHHhcCCccEEEECCcccCCCC----------------------------------------------------------
Confidence            9999999999999999864321                                                          


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                      ++.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||..+..+  .+++..|++||+|+++|+++++.|+  
T Consensus        94 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~--  168 (254)
T 3kzv_A           94 NVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY--FSSWGAYGSSKAALNHFAMTLANEE--  168 (254)
T ss_dssp             TTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS--SCCSHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC--CCCcchHHHHHHHHHHHHHHHHhhc--
Confidence            123889999999999999999999999999999876 99999999999887  4788999999999999999999998  


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCC---------------cccccccCChhhHHHHHHHhhcCC-CCCccceEE-Eehh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGS---------------ADAKATSRKPEIMADAAYYILSSN-PPSLTGQFL-IDDE  309 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~---------------~~~~~~~~~pe~vA~~v~~L~s~~-~~~~tG~~i-~d~g  309 (406)
                      +|||||+|+||+ +.|++.+......               ..+..++.+|+|+|++++||+++. ++++||+++ +|+|
T Consensus       169 ~~i~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          169 RQVKAIAVAPGI-VDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             TTSEEEEEECSS-CCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             cCcEEEEEeCCc-ccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence            689999999996 5665433221110               013456789999999999999998 599999999 6666


Q ss_pred             HH
Q psy6113         310 VL  311 (406)
Q Consensus       310 ~~  311 (406)
                      .+
T Consensus       248 ~~  249 (254)
T 3kzv_A          248 AL  249 (254)
T ss_dssp             GG
T ss_pred             cc
Confidence            54

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=6.1e-41  Score=315.24  Aligned_cols=240  Identities=16%  Similarity=0.195  Sum_probs=198.7

Q ss_pred             cccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC-eeeeeeecCCChHHHH
Q psy6113           5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG-NCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         5 ~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~Dl~~~~~v~   81 (406)
                      ++|+||+++||||+  +|||+++|++|+++|++|++++|+.+.       .+...+.....+. ++.++.+|++|+++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   75 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-------EKSVHELAGTLDRNDSIILPCDVTNDAEIE   75 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-------HHHHHHHHHTSSSCCCEEEECCCSSSHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-------HHHHHHHHHhcCCCCceEEeCCCCCHHHHH
Confidence            47899999999999  779999999999999999999998532       1222333334444 7899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|+||||||+.......                                                   
T Consensus        76 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~---------------------------------------------------  104 (266)
T 3oig_A           76 TCFASIKEQVGVIHGIAHCIAFANKEELV---------------------------------------------------  104 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCGGGGS---------------------------------------------------
T ss_pred             HHHHHHHHHhCCeeEEEEccccccccccc---------------------------------------------------
Confidence            99999999999999999999987532111                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                          .++.+.+.++|+.++++|+.+++.++++++|+|++  .|+||++||..+..+  .+++..|++||+|+++|+++++
T Consensus       105 ----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la  176 (266)
T 3oig_A          105 ----GEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELV--MPNYNVMGVAKASLDASVKYLA  176 (266)
T ss_dssp             ----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSC--CTTTHHHHHHHHHHHHHHHHHH
T ss_pred             ----cchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEeccccccc--CCCcchhHHHHHHHHHHHHHHH
Confidence                12237889999999999999999999999999975  489999999999877  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++||+||+|+||+ +.|++.......        ...+..+..+|+|+|++++||+++.+.++||+++ +|+|+.
T Consensus       177 ~e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          177 ADLGKENIRVNSISAGP-IRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             HHHGGGTEEEEEEEECC-CCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhhcCcEEEEEecCc-ccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence            99999999999999996 555443222110        0123456789999999999999998999999999 777765

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.2e-40  Score=314.81  Aligned_cols=246  Identities=20%  Similarity=0.244  Sum_probs=191.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEec-CCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCCh----H
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK-TAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDE----H   78 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r-~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~----~   78 (406)
                      .+|+||+++||||++|||+++|++|+++|++|++++| +.++       +++..+++... +.++.++.+|++++    +
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   79 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA-------AQRLVAELNAARAGSAVLCKGDLSLSSSLLD   79 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHHSTTCEEEEECCCSSSTTHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHH-------HHHHHHHHHHhcCCceEEEeccCCCccccHH
Confidence            4588999999999999999999999999999999999 5443       33455556554 67899999999999    9


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.+|++|+||||||+....+..+.+...                                          
T Consensus        80 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~------------------------------------------  117 (276)
T 1mxh_A           80 CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTN------------------------------------------  117 (276)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------------------------------------------
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCccc------------------------------------------
Confidence            99999999999999999999999987544332000000                                          


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC------CeEEEeCCCCCCCCCccCCchhhhHhhHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH------AHILNISPPLNLNPFWFKNHVAYTISKYG  232 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~------g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa  232 (406)
                            .....+...++|++++++|+.++++++++++|+|+ ++.      ++||++||..+..+  .+++..|++||+|
T Consensus       118 ------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a  188 (276)
T 1mxh_A          118 ------GAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCDAMTDLP--LPGFCVYTMAKHA  188 (276)
T ss_dssp             ------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCGGGGSC--CTTCHHHHHHHHH
T ss_pred             ------ccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECchhhcCC--CCCCeehHHHHHH
Confidence                  00000222389999999999999999999999998 555      89999999998876  4788999999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhhhhHH------HHHHhcCCCcccccc-cCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTAIYTA------AIEMLTGGSADAKAT-SRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~~~t~------~~~~~~~~~~~~~~~-~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      +++|+++++.|++++||+||+|+||+ +.|+      ..+.+..  ..+..+ +.+|+|+|++++||+++.+.++||+++
T Consensus       189 ~~~l~~~la~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~--~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~  265 (276)
T 1mxh_A          189 LGGLTRAAALELAPRHIRVNAVAPGL-SLLPPAMPQETQEEYRR--KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTL  265 (276)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESS-BSCCSSSCHHHHHHHHT--TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEecCc-ccCCccCCHHHHHHHHh--cCCCCCCCCCHHHHHHHHHHHhCccccCccCcEE
Confidence            99999999999999999999999996 4443      1111111  123455 789999999999999988899999999


Q ss_pred             -EehhHH
Q psy6113         306 -IDDEVL  311 (406)
Q Consensus       306 -~d~g~~  311 (406)
                       +|+|+.
T Consensus       266 ~vdgG~~  272 (276)
T 1mxh_A          266 KVDGGLI  272 (276)
T ss_dssp             EESTTGG
T ss_pred             EECCchh
Confidence             777753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=5.5e-41  Score=318.18  Aligned_cols=241  Identities=14%  Similarity=0.155  Sum_probs=202.0

Q ss_pred             CCcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           3 NTGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         3 ~~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      +|.++++|+++||||+  +|||+++|++|+++|++|++++|+..         .+..+++.+...++.++.+|+++++++
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~---------~~~~~~l~~~~~~~~~~~~Dl~~~~~v   90 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF---------KDRVEKLCAEFNPAAVLPCDVISDQEI   90 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC---------HHHHHHHHGGGCCSEEEECCTTCHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH---------HHHHHHHHHhcCCceEEEeecCCHHHH
Confidence            4678999999999988  88999999999999999999999861         134556666666789999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.+++||+||||||+.......                                                  
T Consensus        91 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~--------------------------------------------------  120 (280)
T 3nrc_A           91 KDLFVELGKVWDGLDAIVHSIAFAPRDQLE--------------------------------------------------  120 (280)
T ss_dssp             HHHHHHHHHHCSSCCEEEECCCCCCGGGSS--------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCcccC--------------------------------------------------
Confidence            999999999999999999999987542211                                                  


Q ss_pred             cccccCCCCC-CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         161 SAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       161 g~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                           .++.+ .+.++|+.++++|+.++++++++++|+|+++ .++||++||..+..+  .+++..|++||+|+++|+++
T Consensus       121 -----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~~~~~  192 (280)
T 3nrc_A          121 -----GNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKA--MPSYNTMGVAKASLEATVRY  192 (280)
T ss_dssp             -----SCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSC--CTTTHHHHHHHHHHHHHHHH
T ss_pred             -----CccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccC--CCCchhhHHHHHHHHHHHHH
Confidence                 01114 8899999999999999999999999999876 599999999999877  47889999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++.|++++||+||+|+||+ +.|++.+.....        ...+..+..+|+|+|++++||+++.++++||+++ +|+|+
T Consensus       193 la~e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~  271 (280)
T 3nrc_A          193 TALALGEDGIKVNAVSAGP-IKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGY  271 (280)
T ss_dssp             HHHHHGGGTCEEEEEEECC-CCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHcCcEEEEEeecc-ccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCc
Confidence            9999999999999999996 556443322110        0123566789999999999999998999999999 77776


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       272 ~  272 (280)
T 3nrc_A          272 H  272 (280)
T ss_dssp             G
T ss_pred             c
Confidence            4

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-41  Score=317.68  Aligned_cols=238  Identities=24%  Similarity=0.374  Sum_probs=191.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH---HHcCCeeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV---EDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~---~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++   ...+.++.++.+|++|++++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   73 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAER-------LEETRQQILAAGVSEQNVNSVVADVTTDAGQ   73 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcccCCCceeEEecccCCHHHH
Confidence            346889999999999999999999999999999999998653       23344444   22345788999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+++|++|+||||||+....+..                                                  
T Consensus        74 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~--------------------------------------------------  103 (278)
T 1spx_A           74 DEILSTTLGKFGKLDILVNNAGAAIPDSQS--------------------------------------------------  103 (278)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC----------------------------------------------------------
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCcccc--------------------------------------------------
Confidence            999999999999999999999976543322                                                  


Q ss_pred             cccccCCCCCC----chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCC-CCCCccCCchhhhHhhHHHHH
Q psy6113         161 SAISLTDTANT----PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN-LNPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       161 g~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~-~~~~~~~~~~~Y~asKaal~~  235 (406)
                               +.    +.++|++++++|+.|++.++++++|+|++++ |+||++||..+ ..+  .++...|++||+++++
T Consensus       104 ---------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~--~~~~~~Y~~sK~a~~~  171 (278)
T 1spx_A          104 ---------KTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA--TPDFPYYSIAKAAIDQ  171 (278)
T ss_dssp             --------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC--CTTSHHHHHHHHHHHH
T ss_pred             ---------cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC--CCCccHHHHHHHHHHH
Confidence                     44    8899999999999999999999999998876 99999999988 765  4778899999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhc---CCC------------cccccccCChhhHHHHHHHhhcCCCCC-
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLT---GGS------------ADAKATSRKPEIMADAAYYILSSNPPS-  299 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~---~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~-  299 (406)
                      |+++++.|++++||+||+|+||+ +.|++.....   ...            ..+..++.+|+|+|++++||+++.+++ 
T Consensus       172 ~~~~la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~  250 (278)
T 1spx_A          172 YTRNTAIDLIQHGIRVNSISPGL-VATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSY  250 (278)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECC-BCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred             HHHHHHHHHHhcCcEEEEEecCc-ccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999999996 4554332210   000            013356789999999999999977776 


Q ss_pred             ccceEE-EehhHH
Q psy6113         300 LTGQFL-IDDEVL  311 (406)
Q Consensus       300 ~tG~~i-~d~g~~  311 (406)
                      +||+++ +|+|..
T Consensus       251 ~tG~~~~vdgG~~  263 (278)
T 1spx_A          251 IIGHQLVVDGGSS  263 (278)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             ccCcEEEECCCcc
Confidence            999999 777753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=4.2e-41  Score=316.76  Aligned_cols=227  Identities=24%  Similarity=0.297  Sum_probs=193.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++.             ...++.++.+|++|+++++++++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------------~~~~~~~~~~Dv~d~~~v~~~~~   79 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------------NLPNTLCAQVDVTDKYTFDTAIT   79 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------------CCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------------hcCCceEEEecCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999986532211             12367889999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.+|++|+||||||+....+..                                                       
T Consensus        80 ~~~~~~g~iD~lvnnAg~~~~~~~~-------------------------------------------------------  104 (266)
T 3p19_A           80 RAEKIYGPADAIVNNAGMMLLGQID-------------------------------------------------------  104 (266)
T ss_dssp             HHHHHHCSEEEEEECCCCCCCCCTT-------------------------------------------------------
T ss_pred             HHHHHCCCCCEEEECCCcCCCCCcc-------------------------------------------------------
Confidence            9999999999999999987544433                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+|+++|+++++.|++
T Consensus       105 ----~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~  178 (266)
T 3p19_A          105 ----TQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT--FPDHAAYCGTKFAVHAISENVREEVA  178 (266)
T ss_dssp             ----TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC--CCCCchHHHHHHHHHHHHHHHHHHhc
Confidence                889999999999999999999999999999998899999999999877  47889999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEEEe
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID  307 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d  307 (406)
                      ++|||||+|+||+ +.|++.+......        ..+..++.+|+|+|++++||++++...+++++++.
T Consensus       179 ~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~i~i~  247 (266)
T 3p19_A          179 ASNVRVMTIAPSA-VKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIALA  247 (266)
T ss_dssp             GGTCEEEEEEECS-BSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred             ccCcEEEEEeeCc-cccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccceeeEEe
Confidence            9999999999996 5665443222110        11445678999999999999999888888888754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-41  Score=314.16  Aligned_cols=240  Identities=19%  Similarity=0.225  Sum_probs=197.9

Q ss_pred             CcccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ..++++|++|||||+  +|||+++|++|+++|++|++++|+.+.        .+..+++....+++.++.+|++|+++++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   80 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--------KDRITEFAAEFGSELVFPCDVADDAQID   80 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--------HHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh--------HHHHHHHHHHcCCcEEEECCCCCHHHHH
Confidence            467899999999998  999999999999999999999998432        2334455445556899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++++||+||||||+.......                                                   
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~---------------------------------------------------  109 (271)
T 3ek2_A           81 ALFASLKTHWDSLDGLVHSIGFAPREAIA---------------------------------------------------  109 (271)
T ss_dssp             HHHHHHHHHCSCEEEEEECCCCCCGGGGS---------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEECCccCcccccc---------------------------------------------------
Confidence            99999999999999999999987542111                                                   


Q ss_pred             ccccCCCCC-CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         162 AISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       162 ~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                          .++.+ .+.++|+.++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+|+++|++++
T Consensus       110 ----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~l  181 (271)
T 3ek2_A          110 ----GDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERA--IPNYNTMGLAKAALEASVRYL  181 (271)
T ss_dssp             ----SCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHH
T ss_pred             ----CccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccC--CCCccchhHHHHHHHHHHHHH
Confidence                11124 899999999999999999999999999985  489999999999877  478899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcC--------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++||+||+|+||+ +.|++.+....        ....+..++.+|+|+|++++||+++.++++||+++ +|+|+.
T Consensus       182 a~e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~  260 (271)
T 3ek2_A          182 AVSLGAKGVRVNAISAGP-IKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFN  260 (271)
T ss_dssp             HHHHHTTTCEEEEEEECC-C-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGG
T ss_pred             HHHHHhcCcEEEEEecCc-ccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCee
Confidence            999999999999999996 66655322110        00124467789999999999999998999999999 777765

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.2e-40  Score=313.58  Aligned_cols=239  Identities=23%  Similarity=0.278  Sum_probs=198.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.++.+|+++||||++|||+++|++|+++|++|++.+++...      ..++..+++...+.++.++.+|++|+++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   94 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAA------GAQETLNAIVANGGNGRLLSFDVANREQCREV   94 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchH------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            457889999999999999999999999999999776544321      23455667777788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+..                                                     
T Consensus        95 ~~~~~~~~g~id~li~nAg~~~~~~~~-----------------------------------------------------  121 (267)
T 4iiu_A           95 LEHEIAQHGAWYGVVSNAGIARDAAFP-----------------------------------------------------  121 (267)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHHhCCccEEEECCCCCCCCccc-----------------------------------------------------
Confidence            999999999999999999987554332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhH-hcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK-KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~-~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|+.++++|+.++++++++++|.|. +++.++||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus       122 ------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~  193 (267)
T 4iiu_A          122 ------ALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG--NRGQVNYSAAKAGIIGATKALAI  193 (267)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC--CCCCchhHHHHHHHHHHHHHHHH
Confidence                  788999999999999999999999999887 566799999999988876  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC-----CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG-----GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~-----~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++||+||+|+||+ +.|++.+....     ....+..++.+|+|+|++++||+++.++++||+.+ +|+|+
T Consensus       194 e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          194 ELAKRKITVNCIAPGL-IDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHGGGTEEEEEEEECS-BCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhhcCeEEEEEEEee-ecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            9999999999999996 55543211000     00124466789999999999999998999999999 77764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.2e-40  Score=346.63  Aligned_cols=236  Identities=25%  Similarity=0.348  Sum_probs=195.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC--CcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK--LPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~--~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+......  -.+.++++.+++...++++.   +|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHH
Confidence            46899999999999999999999999999999999886521100  01224556677777666543   68888888999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.++||+||+||||||+....++                                                     
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~-----------------------------------------------------  107 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASM-----------------------------------------------------  107 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCT-----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCh-----------------------------------------------------
Confidence            999999999999999999998654433                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            .+++.++|++++++|+.|+|+++|+++|+|++++.|+|||+||.++..+  .+++..|++||+|+.+|+++|+.
T Consensus       108 ------~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~--~~~~~~Y~asKaal~~lt~~la~  179 (604)
T 2et6_A          108 ------KKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYG--NFGQANYASAKSALLGFAETLAK  179 (604)
T ss_dssp             ------TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC--CCCchHHHHHHHHHHHHHHHHHH
Confidence                  3899999999999999999999999999999988899999999988876  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++|||||+|+||  +.|++.+...+   .......+|||+|++++||+++. +++||+++ +|+|+
T Consensus       180 El~~~gIrVn~v~Pg--~~T~m~~~~~~---~~~~~~~~pe~vA~~v~~L~s~~-~~itG~~~~vdgG~  242 (604)
T 2et6_A          180 EGAKYNIKANAIAPL--ARSRMTESIMP---PPMLEKLGPEKVAPLVLYLSSAE-NELTGQFFEVAAGF  242 (604)
T ss_dssp             HHGGGTEEEEEEEEC--CCCHHHHTTSC---HHHHTTCSHHHHHHHHHHHTSSS-CCCCSCEEEEETTE
T ss_pred             HhCccCeEEEEEccC--CcCccccccCC---hhhhccCCHHHHHHHHHHHhCCc-ccCCCCEEEECCCe
Confidence            999999999999998  35655543211   11223568999999999999987 89999999 77774

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.4e-40  Score=309.07  Aligned_cols=222  Identities=18%  Similarity=0.186  Sum_probs=188.9

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHH-cCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAK-DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~-~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .++|++|||||++|||+++|++|++ .|++|++.+|+.+...                 .++.++.+|++|+++++++++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-----------------~~~~~~~~Dv~~~~~v~~~~~   64 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----------------ENLKFIKADLTKQQDITNVLD   64 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-----------------TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-----------------ccceEEecCcCCHHHHHHHHH
Confidence            4689999999999999999999999 7899999999876321                 235789999999999999995


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+ + ++++|+||||||+....+..                                                       
T Consensus        65 ~~-~-~~~id~lv~nAg~~~~~~~~-------------------------------------------------------   87 (244)
T 4e4y_A           65 II-K-NVSFDGIFLNAGILIKGSIF-------------------------------------------------------   87 (244)
T ss_dssp             HT-T-TCCEEEEEECCCCCCCBCTT-------------------------------------------------------
T ss_pred             HH-H-hCCCCEEEECCccCCCCCcc-------------------------------------------------------
Confidence            54 3 78999999999987554433                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.++|++++++|+.|+++++++++|+|+++  |+||++||..+..+  .++...|++||+|+++|+++++.|++
T Consensus        88 ----~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~  159 (244)
T 4e4y_A           88 ----DIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIA--KPNSFAYTLSKGAIAQMTKSLALDLA  159 (244)
T ss_dssp             ----TSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCC--CTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----cCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccC--CCCCchhHHHHHHHHHHHHHHHHHHH
Confidence                88999999999999999999999999999876  89999999999877  47889999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcC-----------------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTG-----------------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~-----------------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      ++||+||+|+||+ +.|++.+....                 ....+..++.+|+|+|++++||+++.++++||+++ +|
T Consensus       160 ~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  238 (244)
T 4e4y_A          160 KYQIRVNTVCPGT-VDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPID  238 (244)
T ss_dssp             GGTCEEEEEEESC-BCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HcCeEEEEEecCc-cCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeEC
Confidence            9999999999996 56655433211                 01134567789999999999999998999999999 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      +|+.
T Consensus       239 GG~~  242 (244)
T 4e4y_A          239 GGYT  242 (244)
T ss_dssp             TTGG
T ss_pred             CCcc
Confidence            7764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.2e-40  Score=346.64  Aligned_cols=229  Identities=28%  Similarity=0.374  Sum_probs=192.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+++||||++|||+++|++|+++|++|++++|..         .++..+++.+.++++..+.+|++  ++.++++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~---------~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~  386 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD---------ATKTVDEIKAAGGEAWPDQHDVA--KDSEAII  386 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC---------CHHHHHHHHHTTCEEEEECCCHH--HHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc---------HHHHHHHHHhcCCeEEEEEcChH--HHHHHHH
Confidence            478999999999999999999999999999999998732         13456677777888888888884  5567889


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+....++                                                       
T Consensus       387 ~~~~~~~G~iDiLVnNAGi~~~~~~-------------------------------------------------------  411 (604)
T 2et6_A          387 KNVIDKYGTIDILVNNAGILRDRSF-------------------------------------------------------  411 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCT-------------------------------------------------------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999998654433                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+++.++|++++++|+.|+|+++|+++|+|++++.|+|||+||.++..+  .+++..|++||+|+.+|+++|+.|+
T Consensus       412 ----~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~--~~~~~~Y~asKaal~~lt~~la~El  485 (604)
T 2et6_A          412 ----AKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG--NFGQANYSSSKAGILGLSKTMAIEG  485 (604)
T ss_dssp             ----TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC--CCCChhHHHHHHHHHHHHHHHHHHh
Confidence                3899999999999999999999999999999988899999999988876  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+|| + .|+|.+.....   ......+|+|+|++++||+|+.++ +||+++ +|+|+.
T Consensus       486 ~~~gIrVn~v~PG-~-~T~m~~~~~~~---~~~~~~~pe~vA~~v~~L~s~~~~-itG~~~~vdGG~~  547 (604)
T 2et6_A          486 AKNNIKVNIVAPH-A-ETAMTLSIMRE---QDKNLYHADQVAPLLVYLGTDDVP-VTGETFEIGGGWI  547 (604)
T ss_dssp             GGGTEEEEEEEEC-C-CCCC------------CCSSCGGGTHHHHHHTTSTTCC-CCSCEEEEETTEE
T ss_pred             CccCeEEEEEcCC-C-CCccccccCch---hhccCCCHHHHHHHHHHHhCCccC-CCCcEEEECCCee
Confidence            9999999999999 3 56544322111   123456899999999999999888 999999 777754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-40  Score=308.33  Aligned_cols=229  Identities=22%  Similarity=0.340  Sum_probs=189.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|+||+++||||++|||+++|++|+++|++|++++|+.+++++       .    ... .++.++.+|++|+++++  
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------~----~~~-~~~~~~~~D~~~~~~~~--   66 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-------L----EKY-PGIQTRVLDVTKKKQID--   66 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG-------G----GGS-TTEEEEECCTTCHHHHH--
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-------H----Hhc-cCceEEEeeCCCHHHHH--
Confidence            356899999999999999999999999999999999998654222       1    111 25788999999999987  


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                        ++.+.++++|+||||||+....+..                                                     
T Consensus        67 --~~~~~~~~id~lv~~Ag~~~~~~~~-----------------------------------------------------   91 (246)
T 2ag5_A           67 --QFANEVERLDVLFNVAGFVHHGTVL-----------------------------------------------------   91 (246)
T ss_dssp             --HHHHHCSCCSEEEECCCCCCCBCGG-----------------------------------------------------
T ss_pred             --HHHHHhCCCCEEEECCccCCCCCcc-----------------------------------------------------
Confidence              4556789999999999986543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccC-CchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK-NHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~-~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.  + +...|++||++++.|+++++.
T Consensus        92 ------~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~  163 (246)
T 2ag5_A           92 ------DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG--VVNRCVYSTTKAAVIGLTKSVAA  163 (246)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC--CCCCccHHHHHHHHHHHHHHHHH
Confidence                  7888999999999999999999999999999888999999999888763  4 788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHH-hc-CC----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEM-LT-GG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~-~~-~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |++++||+||+|+||+ +.|++... .. ..          ...+..++.+|+|+|++++||+++.+.++||+.+ +|+|
T Consensus       164 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          164 DFIQQGIRCNCVCPGT-VDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             HHGGGTEEEEEEEESC-EECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HhhhcCcEEEEEeeCc-CcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            9999999999999996 55554332 11 00          0113456779999999999999998899999999 7777


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      +
T Consensus       243 ~  243 (246)
T 2ag5_A          243 W  243 (246)
T ss_dssp             G
T ss_pred             c
Confidence            5

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.6e-40  Score=312.73  Aligned_cols=239  Identities=18%  Similarity=0.192  Sum_probs=196.6

Q ss_pred             cccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .+|+||+++||||+  +|||+++|++|+++|++|++++|+.+ .+       +..+++....+.+.++.+|++|++++++
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~-------~~~~~l~~~~~~~~~~~~D~~~~~~v~~   73 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LE-------KRVRPIAQELNSPYVYELDVSKEEHFKS   73 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-TH-------HHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HH-------HHHHHHHHhcCCcEEEEcCCCCHHHHHH
Confidence            35889999999999  99999999999999999999999874 21       2344444433457889999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+......                                                     
T Consensus        74 ~~~~~~~~~g~id~lv~nAg~~~~~~~-----------------------------------------------------  100 (275)
T 2pd4_A           74 LYNSVKKDLGSLDFIVHSVAFAPKEAL-----------------------------------------------------  100 (275)
T ss_dssp             HHHHHHHHTSCEEEEEECCCCCCGGGG-----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCccCccccC-----------------------------------------------------
Confidence            999999999999999999998643100                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                        ..++.+.+.++|+.++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus       101 --~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~  174 (275)
T 2pd4_A          101 --EGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKY--MAHYNVMGLAKAALESAVRYLAV  174 (275)
T ss_dssp             --SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCC--CCCchhhHHHHHHHHHHHHHHHH
Confidence              011237889999999999999999999999999975  389999999988876  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++||+||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.+.++||+++ +|+|..
T Consensus       175 e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          175 DLGKHHIRVNALSAGP-IRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             HHHTTTCEEEEEEECC-CCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhhhcCeEEEEEeeCc-cccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999999999999996 566543221110        0123456789999999999999988899999998 777653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.4e-40  Score=310.43  Aligned_cols=235  Identities=26%  Similarity=0.382  Sum_probs=197.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .|+||+++||||++|||+++|++|+++|++|++++++...      ..++...++...+.++.++.+|+++.++++++++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE------EAEETVYEIQSNGGSAFSIGANLESLHGVEALYS   77 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSH------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchH------HHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHH
Confidence            4789999999999999999999999999999986444321      2345667777788899999999999999999999


Q ss_pred             HHHHhcC------CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          86 AAVDKFG------GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        86 ~i~~~~g------~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      ++.+.++      ++|+||||||+......                                                  
T Consensus        78 ~~~~~~~~~~~~~~id~lv~nAg~~~~~~~--------------------------------------------------  107 (255)
T 3icc_A           78 SLDNELQNRTGSTKFDILINNAGIGPGAFI--------------------------------------------------  107 (255)
T ss_dssp             HHHHHHHHHHSSSCEEEEEECCCCCCCBCG--------------------------------------------------
T ss_pred             HHHHHhcccccCCcccEEEECCCCCCCCCh--------------------------------------------------
Confidence            9988764      49999999997644332                                                  


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                               .+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+  .+++..|++||+|+++|+++
T Consensus       108 ---------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~  174 (255)
T 3icc_A          108 ---------EETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRIS--LPDFIAYSMTKGAINTMTFT  174 (255)
T ss_dssp             ---------GGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHH
T ss_pred             ---------hhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccC--CCCcchhHHhHHHHHHHHHH
Confidence                     27889999999999999999999999999944  479999999999877  47889999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++.|++++||+||+|+||+ +.|++.+......        ..+..++.+|+|+|++++||+++.++++||+++ +|+|.
T Consensus       175 la~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          175 LAKQLGARGITVNAILPGF-VKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHGGGTCEEEEEEECC-BCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHhcCeEEEEEEEee-ecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            9999999999999999996 5665433222111        123456779999999999999999999999999 77764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=4.3e-40  Score=304.77  Aligned_cols=226  Identities=23%  Similarity=0.306  Sum_probs=191.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||+++|++|+++|++|++++|+.++          ..+++   +  +.++.+|+++ ++++++++++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~----------~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~   65 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE----------AAQSL---G--AVPLPTDLEK-DDPKGLVKRAL   65 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----------HHHHH---T--CEEEECCTTT-SCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----------HHHhh---C--cEEEecCCch-HHHHHHHHHHH
Confidence            6899999999999999999999999999999998652          22222   3  7788999999 99999999999


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|+||||||+....+.                                                           
T Consensus        66 ~~~g~id~lv~~Ag~~~~~~~-----------------------------------------------------------   86 (239)
T 2ekp_A           66 EALGGLHVLVHAAAVNVRKPA-----------------------------------------------------------   86 (239)
T ss_dssp             HHHTSCCEEEECCCCCCCCCT-----------------------------------------------------------
T ss_pred             HHcCCCCEEEECCCCCCCCCh-----------------------------------------------------------
Confidence            999999999999998654333                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+...++...|++||+++++|+++++.|++++|
T Consensus        87 ~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g  166 (239)
T 2ekp_A           87 LELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLG  166 (239)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcC
Confidence            27889999999999999999999999999999888999999999887663226788999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |+||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.++++||+.+ +|+|+
T Consensus       167 i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          167 IRVNLLCPGY-VETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             EEEEEEEECS-BCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cEEEEEEeCC-ccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            9999999996 555443322100        0124456789999999999999988899999999 77764

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=5.2e-40  Score=311.46  Aligned_cols=240  Identities=20%  Similarity=0.293  Sum_probs=197.0

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |..+++++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+   ..+.++.++.+|+++.+++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~-------~~~~~~---~~~~~~~~~~~Dl~~~~~v   91 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEK-------GKALAD---ELGNRAEFVSTNVTSEDSV   91 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHH---HHCTTEEEEECCTTCHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHH---HhCCceEEEEcCCCCHHHH
Confidence            345678999999999999999999999999999999999998653       222233   3367899999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEec-ccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          81 QSAVNAAVDKFGGIDILVNN-ASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linn-AG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      +++++++ ++++++|++||| ||+........                                                
T Consensus        92 ~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~------------------------------------------------  122 (281)
T 3ppi_A           92 LAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQ------------------------------------------------  122 (281)
T ss_dssp             HHHHHHH-TTSSEEEEEEECCCCCCCCCCSBC------------------------------------------------
T ss_pred             HHHHHHH-HHhCCCCeEEEccCcccccccccc------------------------------------------------
Confidence            9999999 889999999999 55543332210                                                


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHh------cCCCeEEEeCCCCCCCCCccCCchhhhHhhHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK------SNHAHILNISPPLNLNPFWFKNHVAYTISKYGM  233 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~------~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal  233 (406)
                            .+..+.+.++|++++++|+.++++++++++|.|.+      ++.|+||++||..+..+  .++...|++||+|+
T Consensus       123 ------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~  194 (281)
T 3ppi_A          123 ------RDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG--QIGQTAYAAAKAGV  194 (281)
T ss_dssp             ------TTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC--CTTCHHHHHHHHHH
T ss_pred             ------cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC--CCCCcccHHHHHHH
Confidence                  11126788999999999999999999999999987      56789999999999877  47889999999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccc-cccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      ++|+++++.|++++||+||+|+||+ +.|++.+......      ..+. .++.+|+|+|++++||+++  .++||+.+ 
T Consensus       195 ~~~~~~la~e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~  271 (281)
T 3ppi_A          195 IGLTIAAARDLSSAGIRVNTIAPGT-MKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMR  271 (281)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECS-BCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC--SSCCSCEEE
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCc-CCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC--CCcCCcEEE
Confidence            9999999999999999999999996 6666654432110      0122 5678999999999999985  69999999 


Q ss_pred             EehhH
Q psy6113         306 IDDEV  310 (406)
Q Consensus       306 ~d~g~  310 (406)
                      +|+|.
T Consensus       272 vdGG~  276 (281)
T 3ppi_A          272 LDGAQ  276 (281)
T ss_dssp             ESTTC
T ss_pred             ECCCc
Confidence            77664

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=3.1e-40  Score=310.46  Aligned_cols=238  Identities=16%  Similarity=0.193  Sum_probs=194.6

Q ss_pred             ccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +|++|+++||||+  +|||+++|++|+++|++|++++|+. +.       .+..+++....+...++.+|++|+++++++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   77 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-------KGRVEEFAAQLGSDIVLQCDVAEDASIDTM   77 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT-------HHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH-------HHHHHHHHHhcCCcEEEEccCCCHHHHHHH
Confidence            4899999999999  9999999999999999999999986 22       123444444333457889999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+++|++|+||||||+.......                                                     
T Consensus        78 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~-----------------------------------------------------  104 (265)
T 1qsg_A           78 FAELGKVWPKFDGFVHSIGFAPGDQLD-----------------------------------------------------  104 (265)
T ss_dssp             HHHHHTTCSSEEEEEECCCCCCGGGGS-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCccccC-----------------------------------------------------
Confidence            999999999999999999976431100                                                     


Q ss_pred             ccCCCCC-CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                        .++.+ .+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+++++|+++++.
T Consensus       105 --~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~  178 (265)
T 1qsg_A          105 --GDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERA--IPNYNVMGLAKASLEANVRYMAN  178 (265)
T ss_dssp             --SCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             --CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccC--CCCchHHHHHHHHHHHHHHHHHH
Confidence              01125 788999999999999999999999999975  389999999988876  46788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++||+||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.+.++||+++ +|+|..
T Consensus       179 e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          179 AMGPEGVRVNAISAGP-IRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             HHTTTTEEEEEEEECC-CCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HhhhcCeEEEEEEeCC-CccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcC
Confidence            9999999999999996 555443221100        0123456789999999999999988899999998 777754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=6.3e-40  Score=311.64  Aligned_cols=239  Identities=18%  Similarity=0.224  Sum_probs=195.5

Q ss_pred             ccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +|+||+++||||+  +|||+++|++|+++|++|++++|+.+ .       .+..+++....+.+.++.+|++|+++++++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~   89 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-L-------EKRVREIAKGFGSDLVVKCDVSLDEDIKNL   89 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-G-------HHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-H-------HHHHHHHHHhcCCeEEEEcCCCCHHHHHHH
Confidence            4899999999999  99999999999999999999999863 1       223444444333478899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+......                                                      
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~------------------------------------------------------  115 (285)
T 2p91_A           90 KKFLEENWGSLDIIVHSIAYAPKEEF------------------------------------------------------  115 (285)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCGGGG------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCcccC------------------------------------------------------
Confidence            99999999999999999997643110                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                       ..++.+.+.++|++++++|+.|+++++++++|+|+++ .|+||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       116 -~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  191 (285)
T 2p91_A          116 -KGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKV--VPHYNVMGIAKAALESTVRYLAYD  191 (285)
T ss_dssp             -SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccC--CCCccHHHHHHHHHHHHHHHHHHH
Confidence             0112378899999999999999999999999999865 589999999988876  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++||+||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.+.++||+++ +|+|+.
T Consensus       192 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          192 IAKHGHRINAISAGP-VKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             HHTTTCEEEEEEECC-CCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hcccCcEEEEEEeCc-ccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            999999999999996 555432211000        0123456789999999999999988899999988 777754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=6.1e-40  Score=307.30  Aligned_cols=232  Identities=19%  Similarity=0.238  Sum_probs=193.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHH---cCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAK---DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHA   79 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~---~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~   79 (406)
                      .+|++|+++||||++|||+++|++|++   +|++|++++|+.++       +++..+++...  +.++.++.+|++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~   74 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM-------LRQLKEELGAQQPDLKVVLAAADLGTEAG   74 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH-------HHHHHHHHHHHCTTSEEEEEECCTTSHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHH-------HHHHHHHHHhhCCCCeEEEEecCCCCHHH
Confidence            468999999999999999999999999   89999999998654       33445555554  6789999999999999


Q ss_pred             HHHHHHHHHH--hcCCcc--EEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcce
Q psy6113          80 VQSAVNAAVD--KFGGID--ILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDI  155 (406)
Q Consensus        80 v~~~~~~i~~--~~g~iD--~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~  155 (406)
                      ++++++++.+  .+|++|  +||||||+.....                                               
T Consensus        75 v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~-----------------------------------------------  107 (259)
T 1oaa_A           75 VQRLLSAVRELPRPEGLQRLLLINNAATLGDVS-----------------------------------------------  107 (259)
T ss_dssp             HHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCS-----------------------------------------------
T ss_pred             HHHHHHHHHhccccccCCccEEEECCcccCCCC-----------------------------------------------
Confidence            9999999998  778999  9999999754311                                               


Q ss_pred             EeccccccccCCCCC-CchhhHHHHHhhhhhHHHHHHHhhhHHhHhc--CCCeEEEeCCCCCCCCCccCCchhhhHhhHH
Q psy6113         156 LVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLKKS--NHAHILNISPPLNLNPFWFKNHVAYTISKYG  232 (406)
Q Consensus       156 li~~ag~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa  232 (406)
                                .++.+ .+.++|++++++|+.|+++++++++|+|+++  +.|+||++||..+..+  .++...|++||+|
T Consensus       108 ----------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa  175 (259)
T 1oaa_A          108 ----------KGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP--YKGWGLYCAGKAA  175 (259)
T ss_dssp             ----------SCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC--CTTCHHHHHHHHH
T ss_pred             ----------cchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC--CCCccHHHHHHHH
Confidence                      01125 6889999999999999999999999999887  6799999999999876  4788999999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcC---CC--------cccccccCChhhHHHHHHHhhcCCCCCcc
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTG---GS--------ADAKATSRKPEIMADAAYYILSSNPPSLT  301 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~---~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~t  301 (406)
                      +++|+++++.|+++  ||||+|+||+ +.|++.+....   ..        ..+..++.+|+|+|+.++||+++ ++++|
T Consensus       176 ~~~~~~~la~e~~~--i~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~-~~~it  251 (259)
T 1oaa_A          176 RDMLYQVLAAEEPS--VRVLSYAPGP-LDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQS  251 (259)
T ss_dssp             HHHHHHHHHHHCTT--EEEEEEECCS-BSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCT
T ss_pred             HHHHHHHHHhhCCC--ceEEEecCCC-cCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh-ccccC
Confidence            99999999999974  9999999996 56666543321   10        01345678999999999999986 68999


Q ss_pred             ceEEE
Q psy6113         302 GQFLI  306 (406)
Q Consensus       302 G~~i~  306 (406)
                      |+++.
T Consensus       252 G~~i~  256 (259)
T 1oaa_A          252 GAHVD  256 (259)
T ss_dssp             TEEEE
T ss_pred             CcEEe
Confidence            99983

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9.1e-40  Score=308.42  Aligned_cols=235  Identities=24%  Similarity=0.368  Sum_probs=194.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ++|++|||||++|||+++|++|+++|++|+++ .|+.+.       .++..+++...+.++.++.+|++|++++++++++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   97 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREA-------ADAVVAAITESGGEAVAIPGDVGNAADIAAMFSA   97 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            58999999999999999999999999999887 554432       3445666777788999999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|+||||||+......                                                         
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~---------------------------------------------------------  120 (272)
T 4e3z_A           98 VDRQFGRLDGLVNNAGIVDYPQR---------------------------------------------------------  120 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCC---------------------------------------------------------
T ss_pred             HHHhCCCCCEEEECCCCCCCCCC---------------------------------------------------------
Confidence            99999999999999998654221                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc---CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS---NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~---~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                       +.+.+.++|++++++|+.|+++++++++|.|++.   +.|+||++||..+..+. .+++..|++||+|+++|+++++.|
T Consensus       121 -~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~~Y~asKaa~~~~~~~la~e  198 (272)
T 4e3z_A          121 -VDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS-ATQYVDYAASKAAIDTFTIGLARE  198 (272)
T ss_dssp             -GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC-TTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -hhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC-CCCcchhHHHHHHHHHHHHHHHHH
Confidence             1378899999999999999999999999999874   46899999999887653 236788999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc-CC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT-GG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~-~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++++||+||+|+||+ +.|++..... +.      ...+..+..+|+|+|++++||+++.+.++||+++ +|+|
T Consensus       199 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          199 VAAEGIRVNAVRPGI-IETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HGGGTEEEEEEEECS-BC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHcCcEEEEEecCC-CcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            999999999999996 6665543211 10      1124456778999999999999998999999999 7765

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=6.7e-41  Score=324.93  Aligned_cols=238  Identities=16%  Similarity=0.142  Sum_probs=190.2

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCC---------CCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC
Q psy6113           8 SGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTA---------EPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD   76 (406)
Q Consensus         8 ~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~---------~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~   76 (406)
                      ++|++|||||++  |||+++|++|+++|++|++++|++         ++++.....+.    ........+.++.+|+++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~~   76 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMII----DKDKKMNILDMLPFDASF   76 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBC----SSSCBCCEEEEEECCTTC
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHH----hhcccccccccccccccc
Confidence            479999999986  999999999999999999776543         33322110000    000112346777888887


Q ss_pred             h--H------------------HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccch
Q psy6113          77 E--H------------------AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQG  136 (406)
Q Consensus        77 ~--~------------------~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (406)
                      .  +                  +++++++++.+++|+||+||||||+.....                            
T Consensus        77 ~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~----------------------------  128 (329)
T 3lt0_A           77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQ----------------------------  128 (329)
T ss_dssp             SSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTT----------------------------
T ss_pred             cchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCC----------------------------
Confidence            7  7                  999999999999999999999999753111                            


Q ss_pred             hhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCC
Q psy6113         137 LEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLN  216 (406)
Q Consensus       137 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~  216 (406)
                                                   .++.+.+.++|++++++|+.|+++++++++|+|+++  |+||++||..+..
T Consensus       129 -----------------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~  177 (329)
T 3lt0_A          129 -----------------------------KDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ--SSIISLTYHASQK  177 (329)
T ss_dssp             -----------------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTS
T ss_pred             -----------------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeCccccC
Confidence                                         122388999999999999999999999999999886  8999999999987


Q ss_pred             CCccCCch-hhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHhcCC-----------------------
Q psy6113         217 PFWFKNHV-AYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEMLTGG-----------------------  271 (406)
Q Consensus       217 ~~~~~~~~-~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~~-----------------------  271 (406)
                      +  .+++. .|++||+|+.+|+++|+.|+++ +||+||+|+||+ +.|++.+.....                       
T Consensus       178 ~--~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (329)
T 3lt0_A          178 V--VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP-LKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIM  254 (329)
T ss_dssp             C--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC-CCCHHHHTCC-------------------------
T ss_pred             C--CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecce-eechhHhhhhhhcccccccccccccccccccchhh
Confidence            7  46775 9999999999999999999998 899999999996 677776553210                       


Q ss_pred             ----------------------------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         272 ----------------------------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       272 ----------------------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                                                  ...+..++.+|+|+|++++||+|+.++++||+++ +|||+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vdGG~~  323 (329)
T 3lt0_A          255 NNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             -----------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEcCCee
Confidence                                        0124567789999999999999999999999999 777765

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=4.1e-40  Score=308.99  Aligned_cols=239  Identities=19%  Similarity=0.269  Sum_probs=195.1

Q ss_pred             cccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .+|++|+++||||+  +|||+++|++|+++|++|++++|+.+ .       .+..+++....+.+.++.+|++|++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~   75 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-L-------RPEAEKLAEALGGALLFRADVTQDEELDA   75 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-G-------HHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-H-------HHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence            46889999999999  99999999999999999999999863 1       12334444433347889999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.+|++|+||||||+......                                                     
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~-----------------------------------------------------  102 (261)
T 2wyu_A           76 LFAGVKEAFGGLDYLVHAIAFAPREAM-----------------------------------------------------  102 (261)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHH-----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCcccC-----------------------------------------------------
Confidence            999999999999999999997643000                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                        ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus       103 --~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~  176 (261)
T 2wyu_A          103 --EGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKV--VPKYNVMAIAKAALEASVRYLAY  176 (261)
T ss_dssp             --SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSB--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCC--CCCchHHHHHHHHHHHHHHHHHH
Confidence              011237889999999999999999999999999975  389999999988876  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++||+||+|+||+ +.|++.+.....        ...+..++.+|+|+|++++||+++.+.++||+++ +|+|+.
T Consensus       177 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  253 (261)
T 2wyu_A          177 ELGPKGVRVNAISAGP-VRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (261)
T ss_dssp             HHGGGTCEEEEEEECC-CCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhhhCcEEEEEeeCC-CcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcc
Confidence            9999999999999996 555442221100        0124456789999999999999988899999998 777653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.2e-39  Score=300.67  Aligned_cols=228  Identities=20%  Similarity=0.273  Sum_probs=192.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++. ..+.++.++.+|++|++++++++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   73 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDR-------LEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKK   73 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHH
Confidence            47999999999999999999999999999999998764       334455554 5578899999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.+|++|+||||||+....+..                                                        
T Consensus        74 ~~~~~g~id~li~~Ag~~~~~~~~--------------------------------------------------------   97 (235)
T 3l77_A           74 VLERFGDVDVVVANAGLGYFKRLE--------------------------------------------------------   97 (235)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCTT--------------------------------------------------------
T ss_pred             HHHhcCCCCEEEECCccccccCcc--------------------------------------------------------
Confidence            999999999999999987544433                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|++++++|+.|+++++++++|+|+++ .++||++||..+..+  .++...|++||+|+++|+++++  +..
T Consensus        98 ---~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~--~~~  169 (235)
T 3l77_A           98 ---ELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARL--IPYGGGYVSTKWAARALVRTFQ--IEN  169 (235)
T ss_dssp             ---TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSC--CTTCHHHHHHHHHHHHHHHHHH--HHC
T ss_pred             ---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhccc--CCCcchHHHHHHHHHHHHHHHh--hcC
Confidence               88999999999999999999999999999544 589999999888766  4778899999999999999994  447


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDE  309 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g  309 (406)
                      +|||||+|+||+ +.|++.+.....  ....++.+|+|+|++++||+++.+.+++|++++.++
T Consensus       170 ~~i~v~~v~PG~-v~T~~~~~~~~~--~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~  229 (235)
T 3l77_A          170 PDVRFFELRPGA-VDTYFGGSKPGK--PKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSV  229 (235)
T ss_dssp             TTSEEEEEEECS-BSSSTTTCCSCC--CGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCT
T ss_pred             CCeEEEEEeCCc-cccccccccCCc--ccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeec
Confidence            799999999996 666554433322  233467899999999999999999999999985544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=8.8e-40  Score=304.23  Aligned_cols=231  Identities=25%  Similarity=0.315  Sum_probs=181.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.++       +++..   .....++.++.+|+++.++++++
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~---~~~~~~~~~~~~D~~~~~~~~~~   78 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEK-------LKSLG---NALKDNYTIEVCNLANKEECSNL   78 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHH---HHHCSSEEEEECCTTSHHHHHHH
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHH---HHhccCccEEEcCCCCHHHHHHH
Confidence            457899999999999999999999999999999999997653       22222   23356788999999999998877


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++    ++++|+||||||+.......                                                     
T Consensus        79 ~~~----~~~id~li~~Ag~~~~~~~~-----------------------------------------------------  101 (249)
T 3f9i_A           79 ISK----TSNLDILVCNAGITSDTLAI-----------------------------------------------------  101 (249)
T ss_dssp             HHT----CSCCSEEEECCC-------------------------------------------------------------
T ss_pred             HHh----cCCCCEEEECCCCCCCCccc-----------------------------------------------------
Confidence            654    47899999999987543332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.|
T Consensus       102 ------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  173 (249)
T 3f9i_A          102 ------RMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG--NPGQANYCASKAGLIGMTKSLSYE  173 (249)
T ss_dssp             -----------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C--CSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC--CCCCchhHHHHHHHHHHHHHHHHH
Confidence                  678889999999999999999999999999988899999999999877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+...+..      ..+..++.+|+|+|++++||+++.+.++||+++ +|+|.
T Consensus       174 ~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          174 VATRGITVNAVAPGF-IKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             HGGGTEEEEEEEECC-BC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHcCcEEEEEecCc-cccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence            999999999999996 6666544322110      124456778999999999999998999999999 77764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.9e-40  Score=306.91  Aligned_cols=224  Identities=17%  Similarity=0.161  Sum_probs=185.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEE-e--cCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIA-A--KTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~--r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ||+++||||++|||+++|++|+++|++|+++ +  |+.++       +++..+++  .+       .|+.|+++++++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~-------~~~~~~~~--~~-------~~~~~~~~v~~~~~   64 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAE-------RQRFESEN--PG-------TIALAEQKPERLVD   64 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-------HHHHHHHS--TT-------EEECCCCCGGGHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHH-------HHHHHHHh--CC-------CcccCHHHHHHHHH
Confidence            5899999999999999999999999999999 6  87643       22222222  12       34458888999999


Q ss_pred             HHHHhcCCccEEEeccccccc---CCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISL---TDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ++.+.+|++|+||||||+...   .+.                                                     
T Consensus        65 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~-----------------------------------------------------   91 (244)
T 1zmo_A           65 ATLQHGEAIDTIVSNDYIPRPMNRLPL-----------------------------------------------------   91 (244)
T ss_dssp             HHGGGSSCEEEEEECCCCCTTGGGCCS-----------------------------------------------------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCCCc-----------------------------------------------------
Confidence            999999999999999997654   332                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .+++..|++||+|+++|+++++.
T Consensus        92 ------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~  163 (244)
T 1zmo_A           92 ------EGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP--LAYNPLYGPARAATVALVESAAK  163 (244)
T ss_dssp             ------TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC--CTTCTTHHHHHHHHHHHHHHHHH
T ss_pred             ------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC--CCCchHHHHHHHHHHHHHHHHHH
Confidence                  3888999999999999999999999999999988899999999998876  47788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHH---HHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAI---EMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~---~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++||+||+|+||+ +.|++.   +......        ..+..++.+|+|+|++++||+++.++++||+++ +|+|+
T Consensus       164 e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          164 TLSRDGILLYAIGPNF-FNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHGGGTEEEEEEEESS-BCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHhhcCcEEEEEeeCC-CcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            9999999999999996 555554   3221100        124456789999999999999998999999999 77764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=4.8e-39  Score=302.09  Aligned_cols=240  Identities=23%  Similarity=0.292  Sum_probs=187.3

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +.++|++|+++||||++|||++++++|+++|++|++++|+.++       +++..+++...+.++.++.+|+++++++++
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE-------LNECLSKWQKKGFQVTGSVCDASLRPEREK   80 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence            3467899999999999999999999999999999999998653       334555666667789999999999999999


Q ss_pred             HHHHHHHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          83 AVNAAVDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        83 ~~~~i~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      +++++.+.+ +++|+||||||+....+.                                                    
T Consensus        81 ~~~~~~~~~~~~id~li~~Ag~~~~~~~----------------------------------------------------  108 (266)
T 1xq1_A           81 LMQTVSSMFGGKLDILINNLGAIRSKPT----------------------------------------------------  108 (266)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC----------------------------------------------------------
T ss_pred             HHHHHHHHhCCCCcEEEECCCCCCCCCh----------------------------------------------------
Confidence            999999999 899999999997644332                                                    


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                             .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++
T Consensus       109 -------~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la  179 (266)
T 1xq1_A          109 -------LDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS--ASVGSIYSATKGALNQLARNLA  179 (266)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------CCHHHHHHHHHHHHHHHHH
T ss_pred             -------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC--CCCCchHHHHHHHHHHHHHHHH
Confidence                   2788999999999999999999999999999888899999999988876  3678899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++||+||+|+||+ +.|++.+.....       ...+..++.+|+|+|++++||+++.+.+++|+.+ +|+|..
T Consensus       180 ~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          180 CEWASDGIRANAVAPAV-IATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             HHHGGGTCEEEEEECCS-CC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHHhHhCcEEEEEeeCC-CccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            99999999999999996 566554332111       0123446789999999999999988889999998 777643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.2e-39  Score=305.94  Aligned_cols=233  Identities=26%  Similarity=0.366  Sum_probs=188.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+ |+++||||++|||+++|++|+++|++|++++|+.++       +++..+++... .++.++.+|++|++++++++
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~-------~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~   88 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREER-------LQALAGELSAK-TRVLPLTLDVRDRAAMSAAV   88 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHTTT-SCEEEEECCTTCHHHHHHHH
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHH
Confidence            4677 999999999999999999999999999999998653       23344444332 57889999999999999999


Q ss_pred             HHHHHhcCCccEEEeccccccc-CCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISL-TDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+.+|++|+||||||+... .+.                                                      
T Consensus        89 ~~~~~~~g~iD~lvnnAG~~~~~~~~------------------------------------------------------  114 (272)
T 2nwq_A           89 DNLPEEFATLRGLINNAGLALGTDPA------------------------------------------------------  114 (272)
T ss_dssp             HTCCGGGSSCCEEEECCCCCCCCCCG------------------------------------------------------
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCCc------------------------------------------------------
Confidence            9999999999999999997642 222                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCC-eEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g-~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+.+.++|++++++|+.|+++++++++|+|++++.| +||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       115 -----~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~  187 (272)
T 2nwq_A          115 -----QSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP--YPGSHVYGGTKAFVEQFSLNLRC  187 (272)
T ss_dssp             -----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHT
T ss_pred             -----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC--CCCCchHHHHHHHHHHHHHHHHH
Confidence                 278899999999999999999999999999988878 9999999998876  47789999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHh-cCCCc---c--cccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEML-TGGSA---D--AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~-~~~~~---~--~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |++++||+||+|+||+ +.|++.... .....   .  ......+|+|+|++++||+++ ..+++|+.+ +++|
T Consensus       188 el~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~-~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          188 DLQGTGVRVTNLEPGL-CESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQ-PAHLNINSLEIMPV  259 (272)
T ss_dssp             TCTTSCCEEEEEEECS-BC--------------------CCCCBCHHHHHHHHHHHHTS-CTTEEEEEEEEEET
T ss_pred             HhCccCeEEEEEEcCC-CcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCC-CccCccceEEEeec
Confidence            9999999999999996 666654321 11100   0  112346899999999999996 578999988 6654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=4.9e-39  Score=298.40  Aligned_cols=236  Identities=31%  Similarity=0.415  Sum_probs=183.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +|++|+++||||++|||+++|++|+++|++|+++ .|+.+.       +++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS-------LDATAEEFKAAGINVVVAKGDVKNPEDVENMV   74 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSH-------HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5789999999999999999999999999999998 455432       33455566666788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|+||||||+....+..                                                      
T Consensus        75 ~~~~~~~~~~d~vi~~Ag~~~~~~~~------------------------------------------------------  100 (247)
T 2hq1_A           75 KTAMDAFGRIDILVNNAGITRDTLML------------------------------------------------------  100 (247)
T ss_dssp             HHHHHHHSCCCEEEECC---------------------------------------------------------------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccc------------------------------------------------------
Confidence            99999999999999999976433322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++.|+
T Consensus       101 -----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  173 (247)
T 2hq1_A          101 -----KMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG--NAGQANYAASKAGLIGFTKSIAKEF  173 (247)
T ss_dssp             -----------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC--CCCCcHhHHHHHHHHHHHHHHHHHH
Confidence                 677888999999999999999999999999888899999999988776  3678999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++||+||+|+||+ +.|++.....+.      ...+..++.+|+|+|+++++|+++.+.+++|+.+ +++|.
T Consensus       174 ~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          174 AAKGIYCNAVAPGI-IKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             GGGTEEEEEEEECS-BCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHcCcEEEEEEEEE-EeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            99999999999996 556554322110      0123456789999999999999987889999988 77664

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.8e-39  Score=302.08  Aligned_cols=227  Identities=17%  Similarity=0.218  Sum_probs=189.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||+++|++|+++|++|++++|+.++.       +...+ +...+.++..+     |+++++++++++.+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~   68 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK-------DELEA-FAETYPQLKPM-----SEQEPAELIEAVTS   68 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH-------HHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999987652       22333 55556555444     78889999999999


Q ss_pred             hcCCccEEEeccccc-ccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          90 KFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        90 ~~g~iD~linnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      .++++|+||||||+. ...+.                                                           
T Consensus        69 ~~g~iD~lv~nAg~~~~~~~~-----------------------------------------------------------   89 (254)
T 1zmt_A           69 AYGQVDVLVSNDIFAPEFQPI-----------------------------------------------------------   89 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCCCG-----------------------------------------------------------
T ss_pred             HhCCCCEEEECCCcCCCCCCh-----------------------------------------------------------
Confidence            999999999999986 33222                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .+++..|++||+++++|+++++.|++++|
T Consensus        90 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~g  167 (254)
T 1zmt_A           90 DKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP--WKELSTYTSARAGACTLANALSKELGEYN  167 (254)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC--CCCchHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            2788999999999999999999999999999988899999999999876  47889999999999999999999999999


Q ss_pred             eEEEEecchhhh---------hHHHHHHhcC-----CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         249 IAVNALWPRTAI---------YTAAIEMLTG-----GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       249 I~vn~v~PG~~~---------~t~~~~~~~~-----~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+||+|+||+ +         .|++.+....     ....+..++.+|+|+|++++||+++.++++||+++ +|+|..
T Consensus       168 i~v~~v~PG~-v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          168 IPVFAIGPNY-LHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             CCEEEEEESS-BCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             cEEEEEecCc-cccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence            9999999996 5         6655432100     00123456789999999999999998999999999 777653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=7.2e-39  Score=299.87  Aligned_cols=239  Identities=26%  Similarity=0.397  Sum_probs=201.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEec-CCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAK-TAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r-~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +.+|++|+++||||++|||++++++|+++|++|++++| +.++       +++..+++...+.++.++.+|+++++++++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   74 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE-------ANSVLEEIKKVGGEAIAVKGDVTVESDVIN   74 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHH-------HHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            35689999999999999999999999999999999999 4332       334556666667889999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+....+..                                                    
T Consensus        75 ~~~~~~~~~g~id~li~~Ag~~~~~~~~----------------------------------------------------  102 (261)
T 1gee_A           75 LVQSAIKEFGKLDVMINNAGLENPVSSH----------------------------------------------------  102 (261)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcc----------------------------------------------------
Confidence            9999999999999999999986543322                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                             +.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..+  .++...|++||++++.++++++
T Consensus       103 -------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la  173 (261)
T 1gee_A          103 -------EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--WPLFVHYAASKGGMKLMTETLA  173 (261)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC--CCCccHHHHHHHHHHHHHHHHH
Confidence                   678899999999999999999999999999877 789999999988876  4778999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhc-C-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLT-G-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~-~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++||+||+|+||+ +.|++.+... .       ....+..++.+|+|+|++++||+++.+.+++|+++ +|+|..
T Consensus       174 ~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          174 LEYAPKGIRVNNIGPGA-INTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHGGGTCEEEEEEECS-BCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhcccCeEEEEEeeCC-cCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence            99999999999999996 4544332211 0       00123456779999999999999988889999999 777754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=4.2e-39  Score=300.00  Aligned_cols=226  Identities=21%  Similarity=0.393  Sum_probs=183.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||+++|++|+++|++|++++|+.++       +++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   70 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER-------LQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999998643       22223332   45788999999999999999999999


Q ss_pred             hcCCccEEEecccccc-cCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          90 KFGGIDILVNNASAIS-LTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        90 ~~g~iD~linnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      .+|++|+||||||+.. ..+.                                                           
T Consensus        71 ~~g~iD~lvnnAg~~~~~~~~-----------------------------------------------------------   91 (248)
T 3asu_A           71 EWCNIDILVNNAGLALGMEPA-----------------------------------------------------------   91 (248)
T ss_dssp             TTCCCCEEEECCCCCCCCSCG-----------------------------------------------------------
T ss_pred             hCCCCCEEEECCCcCCCCCch-----------------------------------------------------------
Confidence            9999999999999753 2222                                                           


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      .+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+++++|+++++.|++++|
T Consensus        92 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~g  169 (248)
T 3asu_A           92 HKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP--YAGGNVYGATKAFVRQFSLNLRTDLHGTA  169 (248)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC--CCCCchHHHHHHHHHHHHHHHHHHhhhcC
Confidence            2788999999999999999999999999999888899999999998876  47889999999999999999999999999


Q ss_pred             eEEEEecchhhhh-HHHHHHh-cCCCc---c--cccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         249 IAVNALWPRTAIY-TAAIEML-TGGSA---D--AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       249 I~vn~v~PG~~~~-t~~~~~~-~~~~~---~--~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      ||||+|+||+ +. |++.... .....   .  ......+|+|+|++++||+++ +.+++|+.+ ++.
T Consensus       170 i~v~~v~PG~-v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~v~~  235 (248)
T 3asu_A          170 VRVTDIEPGL-VGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL-PAHVNINTLEMMP  235 (248)
T ss_dssp             CEEEEEEECS-BCC----------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEEECC
T ss_pred             cEEEEEeccc-cccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcC-CccceeeEEEEcc
Confidence            9999999996 55 6654321 11100   0  112346999999999999997 578999988 443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.2e-38  Score=296.62  Aligned_cols=236  Identities=24%  Similarity=0.295  Sum_probs=198.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|++|+++||||++|||++++++|+++|++|++++|+.+.       .++..+++.. ..++.++.+|++|++++++++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   73 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDV-------GEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHCC-TTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHhhc-cCceEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998643       2222333322 256889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|+||||||+....+.                                                       
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~~~~~-------------------------------------------------------   98 (251)
T 1zk4_A           74 DATEKAFGPVSTLVNNAGIAVNKSV-------------------------------------------------------   98 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCT-------------------------------------------------------
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999998654333                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          .+.+.++|++++++|+.+++.++++++|.|++++. ++||++||..+..+  .++...|++||++++.++++++.|
T Consensus        99 ----~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~e  172 (251)
T 1zk4_A           99 ----EETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG--DPSLGAYNASKGAVRIMSKSAALD  172 (251)
T ss_dssp             ----TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC--CCCCccchHHHHHHHHHHHHHHHH
Confidence                27889999999999999999999999999998876 89999999988876  477899999999999999999999


Q ss_pred             hc--CCCeEEEEecchhhhhHHHHHHhcC-------CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FK--GDNIAVNALWPRTAIYTAAIEMLTG-------GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~--~~gI~vn~v~PG~~~~t~~~~~~~~-------~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++  ++||++|+|+||+ +.|++.+....       ....+..++.+|+|+|++++||+++.+.+++|+.+ +|+|+
T Consensus       173 ~~~~~~~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          173 CALKDYDVRVNTVHPGY-IKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHTTCSEEEEEEEECC-BCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hcccCCCeEEEEEeeCc-CcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            98  8999999999996 56665543211       01123456779999999999999988889999998 77765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.9e-38  Score=295.73  Aligned_cols=235  Identities=24%  Similarity=0.318  Sum_probs=197.2

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCee-eeeeecCCChHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC-LPCIVDIRDEHAVQ   81 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~-~~~~~Dl~~~~~v~   81 (406)
                      ++++|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++   +.++ .++.+|++|+++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~---~~~~~~~~~~D~~~~~~~~   74 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAA-------LDRAAQEL---GAAVAARIVADVTDAEAMT   74 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHH---GGGEEEEEECCTTCHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHh---cccceeEEEEecCCHHHHH
Confidence            4567899999999999999999999999999999999998653       22233333   4456 88999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+ ++++|+||||||+....+..                                                   
T Consensus        75 ~~~~~~~~-~~~id~li~~Ag~~~~~~~~---------------------------------------------------  102 (254)
T 2wsb_A           75 AAAAEAEA-VAPVSILVNSAGIARLHDAL---------------------------------------------------  102 (254)
T ss_dssp             HHHHHHHH-HSCCCEEEECCCCCCCBCST---------------------------------------------------
T ss_pred             HHHHHHHh-hCCCcEEEECCccCCCCCcc---------------------------------------------------
Confidence            99999988 99999999999986543333                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCc--hhhhHhhHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGMSMCALG  239 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal~~l~~~  239 (406)
                              +.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.  ++.  ..|++||++++.++++
T Consensus       103 --------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~  172 (254)
T 2wsb_A          103 --------ETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN--RPQFASSYMASKGAVHQLTRA  172 (254)
T ss_dssp             --------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--SSSCBHHHHHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC--CCCcchHHHHHHHHHHHHHHH
Confidence                    7788999999999999999999999999999888999999999887663  445  8999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++.|++++||++|+|+||+ +.|++.+......        ..+..++.+|+|+|++++||+++.+.+++|+++ +|+|.
T Consensus       173 ~~~~~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          173 LAAEWAGRGVRVNALAPGY-VATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHGGGTEEEEEEEECC-BCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhcCeEEEEEEecc-cCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence            9999999999999999996 5665544332110        123356779999999999999988889999999 77764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=8.5e-39  Score=296.42  Aligned_cols=223  Identities=10%  Similarity=0.057  Sum_probs=190.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..++|+++||||++|||+++|++|+++|++|++++|+.++..                 ....++.+|++|+++++++++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~~~~~v~~~~~   66 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------SASVIVKMTDSFTEQADQVTA   66 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------SEEEECCCCSCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------------CCcEEEEcCCCCHHHHHHHHH
Confidence            357899999999999999999999999999999999876532                 135678899999999999999


Q ss_pred             HHHHhc--CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          86 AAVDKF--GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        86 ~i~~~~--g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.+.+  +++|+||||||+....+..                                                     
T Consensus        67 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~-----------------------------------------------------   93 (241)
T 1dhr_A           67 EVGKLLGDQKVDAILCVAGGWAGGNAK-----------------------------------------------------   93 (241)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCBCTT-----------------------------------------------------
T ss_pred             HHHHHhCCCCCCEEEEcccccCCCCCc-----------------------------------------------------
Confidence            999999  7999999999986543320                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus        94 -----~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  164 (241)
T 1dhr_A           94 -----SKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDG--TPGMIGYGMAKGAVHQLCQSLAGK  164 (241)
T ss_dssp             -----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHTST
T ss_pred             -----ccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccC--CCCchHHHHHHHHHHHHHHHHHHH
Confidence                 27788999999999999999999999999976  389999999998876  478899999999999999999999


Q ss_pred             hc--CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FK--GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~--~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++  ++||+||+|+||+ ++|++.+.....  ....+..+|+|+|++++||+++.+.++||+++ +|+|.
T Consensus       165 ~~~~~~gi~v~~v~PG~-v~T~~~~~~~~~--~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          165 NSGMPSGAAAIAVLPVT-LDTPMNRKSMPE--ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             TSSCCTTCEEEEEEESC-EECHHHHHHSTT--SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             hccCCCCeEEEEEecCc-ccCccccccCcc--hhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            99  9999999999996 677776554322  12334567999999999999999999999999 66643

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=6.5e-39  Score=309.50  Aligned_cols=241  Identities=22%  Similarity=0.349  Sum_probs=195.1

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC--CCCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH--PKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~--~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      |...++|+||++|||||++|||+++|++|+++|++|++++|.....  ..-.+..++..+++...+..+   .+|+++.+
T Consensus         1 M~~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~   77 (319)
T 1gz6_A            1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVE   77 (319)
T ss_dssp             --CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGG
T ss_pred             CCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHH
Confidence            5566789999999999999999999999999999999987643210  001123445566666666543   48999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.++++|+||||||+....+..                                                
T Consensus        78 ~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~------------------------------------------------  109 (319)
T 1gz6_A           78 AGEKLVKTALDTFGRIDVVVNNAGILRDRSFS------------------------------------------------  109 (319)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGG------------------------------------------------
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChh------------------------------------------------
Confidence            99999999999999999999999987543322                                                


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                                 +.+.++|+.++++|+.|+++++++++|+|++++.++||++||..+..+  .+++..|++||+|+.+|++
T Consensus       110 -----------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~--~~~~~~Y~aSK~a~~~~~~  176 (319)
T 1gz6_A          110 -----------RISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG--NFGQANYSAAKLGLLGLAN  176 (319)
T ss_dssp             -----------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHH
T ss_pred             -----------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC--CCCCHHHHHHHHHHHHHHH
Confidence                       788999999999999999999999999999988899999999887665  3678899999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++.|++++||+||+|+||++  |.+.+...+   .......+|+|+|++++||+++ +.+++|+++ +++|+.
T Consensus       177 ~la~el~~~gI~vn~v~PG~~--t~~~~~~~~---~~~~~~~~p~dvA~~~~~l~s~-~~~~tG~~~~v~GG~~  244 (319)
T 1gz6_A          177 TLVIEGRKNNIHCNTIAPNAG--SRMTETVMP---EDLVEALKPEYVAPLVLWLCHE-SCEENGGLFEVGAGWI  244 (319)
T ss_dssp             HHHHHTGGGTEEEEEEEEECC--STTTGGGSC---HHHHHHSCGGGTHHHHHHHTST-TCCCCSCEEEEETTEE
T ss_pred             HHHHHhcccCEEEEEEeCCCc--cccccccCC---hhhhccCCHHHHHHHHHHHhCc-hhhcCCCEEEECCCeE
Confidence            999999999999999999963  433222111   1123457999999999999987 468999999 777754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-39  Score=304.25  Aligned_cols=238  Identities=22%  Similarity=0.284  Sum_probs=200.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..++++|+++||||++|||+++|++|+++|++|++.+|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~  111 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKS-------CDSVVDEIKSFGYESSGYAGDVSKKEEISEV  111 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHH-------HHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHH-------HHHHHHHHHhcCCceeEEECCCCCHHHHHHH
Confidence            457889999999999999999999999999999998887543       3345566666677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+..                                                     
T Consensus       112 ~~~~~~~~~~id~li~~Ag~~~~~~~~-----------------------------------------------------  138 (285)
T 2c07_A          112 INKILTEHKNVDILVNNAGITRDNLFL-----------------------------------------------------  138 (285)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCCCCCTT-----------------------------------------------------
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCchh-----------------------------------------------------
Confidence            999999999999999999986543332                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+.++++|+.+++.++++++|.|++++.++||++||..+..+  .++...|++||++++.++++++.|
T Consensus       139 ------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  210 (285)
T 2c07_A          139 ------RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG--NVGQANYSSSKAGVIGFTKSLAKE  210 (285)
T ss_dssp             ------TCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC--CCCCchHHHHHHHHHHHHHHHHHH
Confidence                  788999999999999999999999999999888899999999987765  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +++.||+||+|+||+ +.|++.+...+.      ...+..++.+|+|+|++++||+++.+.+++|+++ +|+|.
T Consensus       211 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          211 LASRNITVNAIAPGF-ISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HGGGTEEEEEEEECS-BCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCcEEEEEEeCc-EecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            999999999999996 556544321100      0123456789999999999999988889999999 77664

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.8e-38  Score=295.06  Aligned_cols=236  Identities=27%  Similarity=0.382  Sum_probs=196.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++ ...+.++.++.+|++|+++++++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAET-------LEETARTHWHAYADKVLRVRADVADEGDVNAAIAAT   74 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            6899999999999999999999999999999998653       22334444 334567899999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.++++|+||||||+....+.                                                        ..
T Consensus        75 ~~~~~~id~li~~Ag~~~~~~~--------------------------------------------------------~~   98 (250)
T 2cfc_A           75 MEQFGAIDVLVNNAGITGNSEA--------------------------------------------------------GV   98 (250)
T ss_dssp             HHHHSCCCEEEECCCCCCCTTC--------------------------------------------------------CS
T ss_pred             HHHhCCCCEEEECCCCCCCCCc--------------------------------------------------------ch
Confidence            9999999999999997643220                                                        01


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                      +.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++.|++++
T Consensus        99 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~  176 (250)
T 2cfc_A           99 LHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA--FPGRSAYTTSKGAVLQLTKSVAVDYAGS  176 (250)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC--CCCchhHHHHHHHHHHHHHHHHHHhccc
Confidence            22778899999999999999999999999999988899999999988876  4778999999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHH-hcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         248 NIAVNALWPRTAIYTAAIEM-LTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~-~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||+||+|+||+ +.|++... ....       ...+..++.+|+|+|++++||+++.+.++||+++ +|+|.
T Consensus       177 gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          177 GIRCNAVCPGM-IETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             TEEEEEEEECS-BCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             CeEEEEEEeCc-CccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            99999999996 44443322 1100       0123456779999999999999988889999999 77765

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.9e-38  Score=296.68  Aligned_cols=237  Identities=21%  Similarity=0.277  Sum_probs=200.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|++|+++||||++|||++++++|+++|++|++++|+.++       ..+..+++...+.++.++.+|++|++++++++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   81 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM-------ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAV   81 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            56899999999999999999999999999999999998653       33455666666778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccc-cCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAIS-LTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+.++++|+||||||+.. ..+.                                                      
T Consensus        82 ~~~~~~~~~id~vi~~Ag~~~~~~~~------------------------------------------------------  107 (260)
T 3awd_A           82 RSVHEQEGRVDILVACAGICISEVKA------------------------------------------------------  107 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCT------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCc------------------------------------------------------
Confidence            999999999999999999765 2222                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCc--hhhhHhhHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGMSMCALGMA  241 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal~~l~~~la  241 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+.  ++.  ..|++||++++.++++++
T Consensus       108 -----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~l~  180 (260)
T 3awd_A          108 -----EDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN--RPQQQAAYNASKAGVHQYIRSLA  180 (260)
T ss_dssp             -----TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--SSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC--CCCCccccHHHHHHHHHHHHHHH
Confidence                 37888999999999999999999999999998888999999999887663  444  899999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHH-HhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIE-MLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~-~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      .|++++||+||+|+||+ +.|++.+ .....       ...+..++.+|+|+|+++++|+++.+.+++|+.+ +++|.
T Consensus       181 ~e~~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          181 AEWAPHGIRANAVAPTY-IETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHGGGTEEEEEEEECC-BCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhhhcCeEEEEEEeee-eccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            99999999999999996 4554433 11100       0123456789999999999999988889999988 77664

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-38  Score=304.78  Aligned_cols=225  Identities=22%  Similarity=0.296  Sum_probs=191.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|.++++++
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPA-------LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            445899999999999999999999999999999999998764       4456677777788999999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|+||||||+....+..                                                     
T Consensus        99 ~~~~~~~~g~id~lvnnAg~~~~~~~~-----------------------------------------------------  125 (301)
T 3tjr_A           99 ADEAFRLLGGVDVVFSNAGIVVAGPLA-----------------------------------------------------  125 (301)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGG-----------------------------------------------------
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCcc-----------------------------------------------------
Confidence            999999999999999999987544333                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|+.++++|+.|+++++++++|+|++++ .|+||++||..+..+  .++...|++||+|+++|+++++.
T Consensus       126 ------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~  197 (301)
T 3tjr_A          126 ------QMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP--NAGLGTYGVAKYGVVGLAETLAR  197 (301)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC--CCCchHHHHHHHHHHHHHHHHHH
Confidence                  788999999999999999999999999999877 789999999999887  47899999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC---C----Cc---------ccccccCChhhHHHHHHHhhcCCC
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG---G----SA---------DAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~---~----~~---------~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      |++++||+||+|+||+ +.|++......   .    ..         .......+|+|+|+.++.++....
T Consensus       198 e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          198 EVKPNGIGVSVLCPMV-VETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             HHGGGTEEEEEECCSC-CCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred             HhcccCcEEEEEECCc-cccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence            9999999999999996 55655443210   0    00         011235699999999999986543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-38  Score=292.62  Aligned_cols=222  Identities=15%  Similarity=0.155  Sum_probs=188.9

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |++|+++||||++|||+++|++|+++|++|++++|+.++..                 ....++.+|+++++++++++++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~   63 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------DSNILVDGNKNWTEQEQSILEQ   63 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------SEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------------cccEEEeCCCCCHHHHHHHHHH
Confidence            46899999999999999999999999999999999977532                 1356788999999999999999


Q ss_pred             HHHhc--CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          87 AVDKF--GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+.+  +++|+||||||+....+..                                                      
T Consensus        64 ~~~~~~~g~id~lv~~Ag~~~~~~~~------------------------------------------------------   89 (236)
T 1ooe_A           64 TASSLQGSQVDGVFCVAGGWAGGSAS------------------------------------------------------   89 (236)
T ss_dssp             HHHHHTTCCEEEEEECCCCCCCBCTT------------------------------------------------------
T ss_pred             HHHHhCCCCCCEEEECCcccCCCCCc------------------------------------------------------
Confidence            99999  7999999999986543320                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+  .++...|++||+++++|+++++.|+
T Consensus        90 ----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~  161 (236)
T 1ooe_A           90 ----SKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGP--TPSMIGYGMAKAAVHHLTSSLAAKD  161 (236)
T ss_dssp             ----STTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHHSTT
T ss_pred             ----ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccC--CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence                26788999999999999999999999999975  389999999998876  4788999999999999999999999


Q ss_pred             c--CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHH-HhhcCCCCCccceEE-EehhH
Q psy6113         245 K--GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAY-YILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       245 ~--~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~-~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +  ++||+||+|+||+ +.|++.+...+.  ....+..+|+|+|+.++ +|+++.+.++||+++ +++|.
T Consensus       162 ~~~~~gi~v~~v~Pg~-v~t~~~~~~~~~--~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          162 SGLPDNSAVLTIMPVT-LDTPMNRKWMPN--ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             SSCCTTCEEEEEEESC-BCCHHHHHHSTT--CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             cccCCCeEEEEEecCc-ccCcchhhcCCC--ccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            8  9999999999996 677666554322  12345678999999998 555888899999999 66653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1.9e-38  Score=293.94  Aligned_cols=233  Identities=28%  Similarity=0.393  Sum_probs=196.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ||+++||||++|||+++|++|+++|++|+++ +|+.++       .++..+++...+.++.++.+|++++++++++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKA-------AEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTA   73 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999999985 776543       33445566666788999999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+.++++|+||||||+....+..                                                         
T Consensus        74 ~~~~g~id~li~~Ag~~~~~~~~---------------------------------------------------------   96 (244)
T 1edo_A           74 IDAWGTIDVVVNNAGITRDTLLI---------------------------------------------------------   96 (244)
T ss_dssp             HHHSSCCSEEEECCCCCCCCCGG---------------------------------------------------------
T ss_pred             HHHcCCCCEEEECCCCCCCcCcc---------------------------------------------------------
Confidence            99999999999999986543322                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                        +.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++.|++++
T Consensus        97 --~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~  172 (244)
T 1edo_A           97 --RMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG--NIGQANYAAAKAGVIGFSKTAAREGASR  172 (244)
T ss_dssp             --GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC--CCCCccchhhHHHHHHHHHHHHHHhhhc
Confidence              678899999999999999999999999999888899999999987665  3678899999999999999999999999


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhh-cCCCCCccceEE-EehhH
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYIL-SSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~-s~~~~~~tG~~i-~d~g~  310 (406)
                      ||+||+|+||+ +.|++.......      ...+..++.+|+|+|++++||+ ++.+.+++|+++ +|+|+
T Consensus       173 gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          173 NINVNVVCPGF-IASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             TEEEEEEEECS-BCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             CCEEEEEeeCc-cccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            99999999996 566554432110      0123456779999999999999 677789999998 77764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=8.7e-39  Score=322.21  Aligned_cols=234  Identities=23%  Similarity=0.303  Sum_probs=194.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..++||++|||||++|||+++|++|+++|++|++++|+...        +...+.....+  +.++.||++|.+++++++
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~--------~~l~~~~~~~~--~~~~~~Dvtd~~~v~~~~  278 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA--------EDLKRVADKVG--GTALTLDVTADDAVDKIT  278 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH--------HHHHHHHHHHT--CEEEECCTTSTTHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH--------HHHHHHHHHcC--CeEEEEecCCHHHHHHHH
Confidence            35789999999999999999999999999999999986431        12222333333  457899999999999999


Q ss_pred             HHHHHhcCC-ccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~g~-iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+.+++ ||+||||||+.......                                                     
T Consensus       279 ~~~~~~~g~~id~lV~nAGv~~~~~~~-----------------------------------------------------  305 (454)
T 3u0b_A          279 AHVTEHHGGKVDILVNNAGITRDKLLA-----------------------------------------------------  305 (454)
T ss_dssp             HHHHHHSTTCCSEEEECCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHcCCCceEEEECCcccCCCccc-----------------------------------------------------
Confidence            999999986 99999999987654433                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +++.++|+.++++|+.|+++++++++|.|.+++.++||++||..+..+  .+++..|++||+++++|+++++.|
T Consensus       306 ------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g--~~g~~~YaasKaal~~l~~~la~e  377 (454)
T 3u0b_A          306 ------NMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG--NRGQTNYATTKAGMIGLAEALAPV  377 (454)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence                  889999999999999999999999999999888899999999998876  478999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCCc------ccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSA------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.+.......      .+..+..+|+|+|++++||+++.++++||+++ +|||.
T Consensus       378 ~~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          378 LADKGITINAVAPGF-IETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHTTTCEEEEEEECS-BCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred             hhhcCcEEEEEEcCc-ccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence            999999999999996 67766554332211      23445679999999999999999999999999 77664

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2.4e-38  Score=299.47  Aligned_cols=240  Identities=20%  Similarity=0.213  Sum_probs=198.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++|++|+++||||++|||++++++|+++|++|++++|+.++.       +...+++...+.++.++.+|++|+++++++
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  101 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD-------EKAEHLQKTYGVHSKAYKCNISDPKSVEET  101 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH-------HHHHHHHHHHCSCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHHHhcCCcceEEEeecCCHHHHHHH
Confidence            4578999999999999999999999999999999999987652       334455555677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+.....                                                       
T Consensus       102 ~~~~~~~~g~id~li~~Ag~~~~~~-------------------------------------------------------  126 (279)
T 3ctm_A          102 ISQQEKDFGTIDVFVANAGVTWTQG-------------------------------------------------------  126 (279)
T ss_dssp             HHHHHHHHSCCSEEEECGGGSTTC--------------------------------------------------------
T ss_pred             HHHHHHHhCCCCEEEECCcccccCC-------------------------------------------------------
Confidence            9999999999999999999764311                                                       


Q ss_pred             ccCCCC-CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTA-NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                         ++. +.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+...++...|++||++++.++++++.
T Consensus       127 ---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  203 (279)
T 3ctm_A          127 ---PEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAI  203 (279)
T ss_dssp             ----CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence               112 5678899999999999999999999999998888999999999887652236778999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++| +||+|+||+ +.|++.+.....      ...+..++.+|+|+|++++||+++.+.++||+.+ +|+|+
T Consensus       204 e~~~~~-~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          204 EWAPFA-RVNTISPGY-IDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             HTTTTC-EEEEEEECS-BSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HhcccC-CEEEEeccC-CccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            999999 999999996 555432110000      0113456789999999999999988889999999 77764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=3e-38  Score=296.19  Aligned_cols=239  Identities=25%  Similarity=0.325  Sum_probs=193.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|++|+++||||++|||+++|++|+++|++|++++|+.++.       .+..++   .+.++.++.+|++|+++++++
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~~~~---~~~~~~~~~~D~~~~~~v~~~   76 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG-------EAQAKK---LGNNCVFAPADVTSEKDVQTA   76 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH-------HHHHHH---HCTTEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH-------HHHHHH---hCCceEEEEcCCCCHHHHHHH
Confidence            3578999999999999999999999999999999999987652       222333   366789999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+........                                                    
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~----------------------------------------------------  104 (265)
T 2o23_A           77 LALAKGKFGRVDVAVNCAGIAVASKTYN----------------------------------------------------  104 (265)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSEE----------------------------------------------------
T ss_pred             HHHHHHHCCCCCEEEECCccCCCCcccc----------------------------------------------------
Confidence            9999999999999999999865433220                                                    


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                       .....+.+.++|++++++|+.+++.++++++|+|+++      +.++||++||..+..+  .++...|++||++++.|+
T Consensus       105 -~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~  181 (265)
T 2o23_A          105 -LKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG--QVGQAAYSASKGGIVGMT  181 (265)
T ss_dssp             -TTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHH
T ss_pred             -ccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC--CCCCchhHHHHHHHHHHH
Confidence             0000136788999999999999999999999999987      6799999999988765  367889999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccc-cccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++++.|++++||+||+|+||+ +.|++.+......      ..+. .++.+|+|+|++++||++  +.++||+.+ +|+|
T Consensus       182 ~~la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~--~~~~~G~~i~vdgG  258 (265)
T 2o23_A          182 LPIARDLAPIGIRVMTIAPGL-FGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE--NPFLNGEVIRLDGA  258 (265)
T ss_dssp             HHHHHHHGGGTEEEEEEEECC-BCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTT
T ss_pred             HHHHHHHhhcCcEEEEEEecc-ccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhh--cCccCceEEEECCC
Confidence            999999999999999999996 5665544322111      0122 567799999999999995  468999999 7776


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      +
T Consensus       259 ~  259 (265)
T 2o23_A          259 I  259 (265)
T ss_dssp             C
T ss_pred             E
Confidence            4

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=4e-39  Score=310.99  Aligned_cols=245  Identities=18%  Similarity=0.172  Sum_probs=161.7

Q ss_pred             cccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCC-----------CCCCCCc----ccHHHHHHHHHHcCCe-
Q psy6113           5 GKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTA-----------EPHPKLP----GTIYSAAKEVEDAGGN-   66 (406)
Q Consensus         5 ~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~-----------~~~~~~~----~~i~~~~~~~~~~g~~-   66 (406)
                      ++|+||++|||||  ++|||+++|++|+++|++|++++|+.           +++++..    +..++..+++...+.. 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4589999999999  89999999999999999999998752           2221110    0001223334333321 


Q ss_pred             --eeeee------------ecCCC--------hHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhc
Q psy6113          67 --CLPCI------------VDIRD--------EHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN  124 (406)
Q Consensus        67 --~~~~~------------~Dl~~--------~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~  124 (406)
                        ..++.            +|+++        +++++++++++.+++|+||+||||||+.....                
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~----------------  148 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVT----------------  148 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSS----------------
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCC----------------
Confidence              12222            33444        45899999999999999999999999753100                


Q ss_pred             cccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCC
Q psy6113         125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA  204 (406)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g  204 (406)
                                                               .++.+.+.++|++++++|+.++++++++++|+|+++  |
T Consensus       149 -----------------------------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g  185 (319)
T 2ptg_A          149 -----------------------------------------KPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG--G  185 (319)
T ss_dssp             -----------------------------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--E
T ss_pred             -----------------------------------------CccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC--c
Confidence                                                     112378899999999999999999999999999764  8


Q ss_pred             eEEEeCCCCCCCCCccCCc-hhhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHhcCC-----------
Q psy6113         205 HILNISPPLNLNPFWFKNH-VAYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEMLTGG-----------  271 (406)
Q Consensus       205 ~Iv~vsS~~~~~~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~~-----------  271 (406)
                      +||++||..+..+  .+++ ..|++||+|+.+|+++|+.|+++ +|||||+|+||+ +.|++.+.....           
T Consensus       186 ~Iv~isS~~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~  262 (319)
T 2ptg_A          186 SALALSYIASEKV--IPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGP-LKSRAASAIGKAGDKTFIDLAID  262 (319)
T ss_dssp             EEEEEEECC--------------------THHHHHHHHHHHHHHHCCEEEEEEECC-CC---------------------
T ss_pred             eEEEEeccccccc--cCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCC-ccChhhhhcccccchhhHHHHHH
Confidence            9999999998876  3566 68999999999999999999985 899999999996 677665432210           


Q ss_pred             ---CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         272 ---SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       272 ---~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                         ...+..++.+|+|+|++++||+++.++++||+++ +|+|+.
T Consensus       263 ~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          263 YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ----------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence               0124456789999999999999998999999999 777653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.4e-38  Score=310.12  Aligned_cols=263  Identities=15%  Similarity=0.106  Sum_probs=196.9

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHH-cCCeEEEEecCCCCCCCCccc-----HHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAK-DGANIVIAAKTAEPHPKLPGT-----IYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~-~Ga~Vvl~~r~~~~~~~~~~~-----i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      ..+|++|||||++|||+++|++|++ +|++|++++|+.+...+..++     .....+++...+.++..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 999999999987654321000     0112345566788899999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCC--------CCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCC
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTA--------NTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGG  152 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  152 (406)
                      +++++++.+.||+||+||||||+.....+.        ..+..           ..+..+                   .
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig-----------~~~~~~-------------------~  174 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIG-----------NAVNLR-------------------G  174 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSS-----------SCEEEE-------------------E
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccc-----------cccccc-------------------c
Confidence            999999999999999999999985221000        00000           000000                   0


Q ss_pred             cceEeccccccccCCCCCCchhhHHHHHhhhhhHHH-HHHHhhhH-HhHhcCCCeEEEeCCCCCCCCCccCCc--hhhhH
Q psy6113         153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTY-LVSQKCLP-YLKKSNHAHILNISPPLNLNPFWFKNH--VAYTI  228 (406)
Q Consensus       153 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~p-~m~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~a  228 (406)
                      +|   .+-..+...++.+.+.++|++++++|+.+.| .+++++++ .|++ ++|+||++||..+..+  .+.+  .+|++
T Consensus       175 ~d---~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~--~p~~~~~aY~A  248 (405)
T 3zu3_A          175 LD---TDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKIT--HDIYWNGSIGA  248 (405)
T ss_dssp             EE---TTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGG--TTTTTTSHHHH
T ss_pred             cc---ccccccccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCc--CCCccchHHHH
Confidence            00   0001112223458999999999999999998 78888765 4554 4599999999999876  3555  89999


Q ss_pred             hhHHHHHHHHHHHHhhcCC-CeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCcc
Q psy6113         229 SKYGMSMCALGMAEEFKGD-NIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLT  301 (406)
Q Consensus       229 sKaal~~l~~~la~e~~~~-gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~t  301 (406)
                      ||+|+.+|+|+||.||+++ |||||+|+||+ +.|++....+..+      ..+.++..+||++++.+.||+|+   +++
T Consensus       249 aKaal~~ltrsLA~Ela~~~GIRVNaVaPG~-i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd---~l~  324 (405)
T 3zu3_A          249 AKKDLDQKVLAIRESLAAHGGGDARVSVLKA-VVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD---SLC  324 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSCEEEEEECCC-CCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH---TTS
T ss_pred             HHHHHHHHHHHHHHHhCcccCeEEEEEEeCC-CcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc---ccc
Confidence            9999999999999999999 99999999995 6777766543211      12567889999999999999987   677


Q ss_pred             ceEE-Eehh
Q psy6113         302 GQFL-IDDE  309 (406)
Q Consensus       302 G~~i-~d~g  309 (406)
                      |+.+ +|++
T Consensus       325 ~~~~~~D~~  333 (405)
T 3zu3_A          325 GDSPHMDQE  333 (405)
T ss_dssp             SSCCCBCTT
T ss_pred             CCCCCcCCC
Confidence            7766 6665

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=5e-38  Score=291.24  Aligned_cols=230  Identities=23%  Similarity=0.350  Sum_probs=197.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      ++|+++||||++|||++++++|+++|+       +|++++|+.++       ++...+++...+.++.++.+|+++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v   73 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD-------LEKISLECRAEGALTDTITADISDMADV   73 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH-------HHHHHHHHHTTTCEEEEEECCTTSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHH-------HHHHHHHHHccCCeeeEEEecCCCHHHH
Confidence            379999999999999999999999999       99999997643       3345556666677899999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|+||||||+....+.                                                   
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~---------------------------------------------------  102 (244)
T 2bd0_A           74 RRLTTHIVERYGHIDCLVNNAGVGRFGAL---------------------------------------------------  102 (244)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCCCCG---------------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcCCcCcc---------------------------------------------------
Confidence            99999999999999999999998644332                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              .+.+.++|+.++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||+++++|++++
T Consensus       103 --------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l  172 (244)
T 2bd0_A          103 --------SDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETM  172 (244)
T ss_dssp             --------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             --------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC--CCCCchhHHHHHHHHHHHHHH
Confidence                    2778899999999999999999999999999888899999999998876  477899999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehh
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDE  309 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g  309 (406)
                      +.|++++||+||+|+||+ +.|++......   ....++.+|+|+|+++++++++.+.+++|++++.++
T Consensus       173 a~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~---~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  237 (244)
T 2bd0_A          173 RLYARKCNVRITDVQPGA-VYTPMWGKVDD---EMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPT  237 (244)
T ss_dssp             HHHHTTTTEEEEEEEECC-BCSTTTCCCCS---TTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHhhccCcEEEEEECCC-ccchhhhhccc---cccccCCCHHHHHHHHHHHHhCCccccchheEEecc
Confidence            999999999999999996 56654332211   112467899999999999999999999999985443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-38  Score=294.70  Aligned_cols=240  Identities=23%  Similarity=0.258  Sum_probs=197.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .++|++|+++||||++|||++++++|+++|++|++++|+.++..       +..+++. ..+.++.++.+|++|++++++
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~   81 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV-------EVTEKVGKEFGVKTKAYQCDVSNTDIVTK   81 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHH-------HHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhH-------HHHHHHHHhcCCeeEEEEeeCCCHHHHHH
Confidence            35688999999999999999999999999999999999765421       2233332 336789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.+.++++|+||||||+....+..                                                    
T Consensus        82 ~~~~~~~~~~~id~li~~Ag~~~~~~~~----------------------------------------------------  109 (265)
T 1h5q_A           82 TIQQIDADLGPISGLIANAGVSVVKPAT----------------------------------------------------  109 (265)
T ss_dssp             HHHHHHHHSCSEEEEEECCCCCCCSCGG----------------------------------------------------
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCchh----------------------------------------------------
Confidence            9999999999999999999986543322                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCcc-----CCchhhhHhhHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWF-----KNHVAYTISKYGMSMC  236 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~-----~~~~~Y~asKaal~~l  236 (406)
                             +.+.++|+.++++|+.+++.++++++|+|.+++ .++||++||..+..+...     .+...|++||++++.+
T Consensus       110 -------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~  182 (265)
T 1h5q_A          110 -------ELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNL  182 (265)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHH
T ss_pred             -------hCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHHHHHHHHHH
Confidence                   778899999999999999999999999998876 489999999887655311     1278999999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +++++.|++++||+||+|+||+ +.|++.+...+.      ...+..++.+|+|+|++++||+++.+.+++|+.+ +|+|
T Consensus       183 ~~~la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          183 VKGLAAEWASAGIRVNALSPGY-VNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECS-BCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHHHHHHHHhcCcEEEEEecCc-cccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            9999999999999999999996 555443221000      0123456779999999999999988889999988 7776


Q ss_pred             H
Q psy6113         310 V  310 (406)
Q Consensus       310 ~  310 (406)
                      .
T Consensus       262 ~  262 (265)
T 1h5q_A          262 Q  262 (265)
T ss_dssp             G
T ss_pred             E
Confidence            5

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=5.2e-38  Score=293.05  Aligned_cols=220  Identities=14%  Similarity=0.132  Sum_probs=190.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++.+|+++||||++|||+++|++|+++|++|++++|+.++...                   ..+.+|++|.+++++++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-------------------~~~~~d~~d~~~v~~~~   78 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------------------HSFTIKDSGEEEIKSVI   78 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-------------------EEEECSCSSHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-------------------cceEEEeCCHHHHHHHH
Confidence            45668999999999999999999999999999999999876432                   24678999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.++++|+||||||+.......                                                      
T Consensus        79 ~~~~~~~g~iD~li~~Ag~~~~~~~~------------------------------------------------------  104 (251)
T 3orf_A           79 EKINSKSIKVDTFVCAAGGWSGGNAS------------------------------------------------------  104 (251)
T ss_dssp             HHHHTTTCCEEEEEECCCCCCCBCTT------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCccCCCCCcc------------------------------------------------------
Confidence            99999999999999999987544311                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+  .++...|++||+|++.|+++++.|+
T Consensus       105 ----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~  176 (251)
T 3orf_A          105 ----SDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNR--TSGMIAYGATKAATHHIIKDLASEN  176 (251)
T ss_dssp             ----STTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHTSTT
T ss_pred             ----cccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccC--CCCCchhHHHHHHHHHHHHHHHHHh
Confidence                27788999999999999999999999999976  389999999998877  4788999999999999999999998


Q ss_pred             c--CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcC-CCCCccceEE-Eeh
Q psy6113         245 K--GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSS-NPPSLTGQFL-IDD  308 (406)
Q Consensus       245 ~--~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~~i-~d~  308 (406)
                      +  ++||+||+|+||+ +.|++.+.....  .+..++.+|+|+|++++||+++ .+.++||+++ +++
T Consensus       177 ~~~~~gi~v~~v~PG~-v~t~~~~~~~~~--~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~  241 (251)
T 3orf_A          177 GGLPAGSTSLGILPVT-LDTPTNRKYMSD--ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFET  241 (251)
T ss_dssp             SSSCTTCEEEEEEESC-BCCHHHHHHCTT--SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             cccCCCcEEEEEecCc-CcCcchhhhccc--ccccccCCHHHHHHHHHHHhcCccccCCcceEEEEec
Confidence            7  8999999999996 677776665444  3456788999999999999998 8899999998 443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=6.3e-38  Score=299.85  Aligned_cols=241  Identities=21%  Similarity=0.256  Sum_probs=198.5

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~   81 (406)
                      ...+|+||+++||||++|||+++|++|+++|++|++++|+.++       +.+..+++... +.++.++.+|++|+++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~   92 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDV-------LKATAEQISSQTGNKVHAIQCDVRDPDMVQ   92 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHHhcCCceEEEEeCCCCHHHHH
Confidence            3457899999999999999999999999999999999998653       23344555444 678999999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|+||||||+....+..                                                   
T Consensus        93 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~---------------------------------------------------  121 (302)
T 1w6u_A           93 NTVSELIKVAGHPNIVINNAAGNFISPTE---------------------------------------------------  121 (302)
T ss_dssp             HHHHHHHHHTCSCSEEEECCCCCCCSCGG---------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCccc---------------------------------------------------
Confidence            99999999999999999999976443322                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhH-hcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK-KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~-~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l  240 (406)
                              +.+.++|+.++++|+.+++.++++++|+|. +++.++||++||..+..+  .++...|++||++++.+++++
T Consensus       122 --------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l  191 (302)
T 1w6u_A          122 --------RLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG--SGFVVPSASAKAGVEAMSKSL  191 (302)
T ss_dssp             --------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC--CCCcchhHHHHHHHHHHHHHH
Confidence                    678899999999999999999999999998 455689999999987765  367889999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +.|++++||+||+|+||++.++.+.....+..        ..+..++.+|+|+|++++||+++.+.+++|+.+ +++|..
T Consensus       192 a~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  271 (302)
T 1w6u_A          192 AAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE  271 (302)
T ss_dssp             HHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCee
Confidence            99999999999999999743432433221111        123446779999999999999988889999988 777764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=8.7e-38  Score=291.20  Aligned_cols=237  Identities=28%  Similarity=0.402  Sum_probs=200.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|++|+++||||++|||++++++|+++|++|++++|+.++       ++...+++...+.++.++.+|++|+++++++
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   78 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA-------ANHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH-------HHHHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            456899999999999999999999999999999999998653       3345566666677899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+                                                       
T Consensus        79 ~~~~~~~~~~~d~vi~~Ag~~~~~~-------------------------------------------------------  103 (255)
T 1fmc_A           79 ADFAISKLGKVDILVNNAGGGGPKP-------------------------------------------------------  103 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCC-------------------------------------------------------
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCC-------------------------------------------------------
Confidence            9999999999999999999764322                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          + +.+.++|+.++++|+.++++++++++|+|++++.++||++||..+..+  .++...|++||++++.++++++.|
T Consensus       104 ----~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~  176 (255)
T 1fmc_A          104 ----F-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK--NINMTSYASSKAAASHLVRNMAFD  176 (255)
T ss_dssp             ----T-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----C-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC--CCCCcccHHHHHHHHHHHHHHHHH
Confidence                1 567889999999999999999999999999888899999999988876  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||++|+|+||+ +.|++.+.....       ...+..++.+|+|+|++++||+++.+.+++|+.+ +++|.
T Consensus       177 ~~~~~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  250 (255)
T 1fmc_A          177 LGEKNIRVNGIAPGA-ILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHTTTEEEEEEEECS-BCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             hhhcCcEEEEEeccc-CcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCce
Confidence            999999999999996 555544321110       0123456789999999999999987888999988 66653

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.8e-38  Score=297.48  Aligned_cols=238  Identities=21%  Similarity=0.284  Sum_probs=193.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-------CeeeeeeecCCCh
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-------GNCLPCIVDIRDE   77 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-------~~~~~~~~Dl~~~   77 (406)
                      .+|++|+++||||++|||+++|++|+++|++|++++|+.++.       ++..+++...+       .++.++.+|++|+
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   75 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAA-------QETVRLLGGPGSKEGPPRGNHAAFQADVSEA   75 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHTC------------CCEEEECCTTSH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHH-------HHHHHHHHhcCccccccCcceEEEEecCCCH
Confidence            368899999999999999999999999999999999986532       22333333333       5688899999999


Q ss_pred             HHHHHHHHHHHHhcCCc-cEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceE
Q psy6113          78 HAVQSAVNAAVDKFGGI-DILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDIL  156 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~i-D~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~l  156 (406)
                      ++++++++.+.+.++++ |+||||||+....+..                                              
T Consensus        76 ~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~----------------------------------------------  109 (264)
T 2pd6_A           76 RAARCLLEQVQACFSRPPSVVVSCAGITQDEFLL----------------------------------------------  109 (264)
T ss_dssp             HHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGG----------------------------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchh----------------------------------------------
Confidence            99999999999999999 9999999986543322                                              


Q ss_pred             eccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHH
Q psy6113         157 VNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       157 i~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~  235 (406)
                                   +.+.++|+.++++|+.++++++++++|+|.+++ .++||++||..+..+  .++...|++||++++.
T Consensus       110 -------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~  174 (264)
T 2pd6_A          110 -------------HMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG--NVGQTNYAASKAGVIG  174 (264)
T ss_dssp             -------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC--CTTBHHHHHHHHHHHH
T ss_pred             -------------hCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC--CCCChhhHHHHHHHHH
Confidence                         778899999999999999999999999999876 789999999887765  3678999999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      |+++++.|++++||+||+|+||+ +.|++........      ..+..++.+|+|+|+++++|+++.+.+++|+.+ +++
T Consensus       175 ~~~~la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  253 (264)
T 2pd6_A          175 LTQTAARELGRHGIRCNSVLPGF-IATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTG  253 (264)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECS-BCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhhhcCeEEEEEeeec-ccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence            99999999999999999999996 5554433221110      113345679999999999999987889999999 777


Q ss_pred             hHH
Q psy6113         309 EVL  311 (406)
Q Consensus       309 g~~  311 (406)
                      |..
T Consensus       254 g~~  256 (264)
T 2pd6_A          254 GLF  256 (264)
T ss_dssp             TC-
T ss_pred             Cce
Confidence            754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2e-38  Score=331.14  Aligned_cols=239  Identities=24%  Similarity=0.352  Sum_probs=184.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC--CcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK--LPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~--~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+......  -.+.++...+++...+..+   .+|+++.++++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~   90 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGA   90 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHH
Confidence            468999999999999999999999999999999999883221100  1122455677777766654   47999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.+|+||+||||||+....++.                                                   
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~---------------------------------------------------  119 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLV---------------------------------------------------  119 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCST---------------------------------------------------
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcc---------------------------------------------------
Confidence            99999999999999999999987654433                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                              +.+.++|+.++++|+.|+++++++++|+|++++.|+||++||.++..+  .+++..|++||+|+.+|+++++
T Consensus       120 --------~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~--~~~~~~Y~asKaal~~lt~~la  189 (613)
T 3oml_A          120 --------KTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG--NFGQVNYTAAKMGLIGLANTVA  189 (613)
T ss_dssp             --------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC--CCCChHHHHHHHHHHHHHHHHH
Confidence                    889999999999999999999999999999999999999999988876  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~  312 (406)
                      .|++++||+||+|+||+ + |.+.   .........+..+|+|+|++++||+++. +++||+++ +|+|+..
T Consensus       190 ~e~~~~gI~vn~v~Pg~-~-t~~~---~~~~~~~~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG~~~  255 (613)
T 3oml_A          190 IEGARNNVLCNVIVPTA-A-SRMT---EGILPDILFNELKPKLIAPVVAYLCHES-CEDNGSYIESAAGWAT  255 (613)
T ss_dssp             HHHGGGTEEEEEEEEC-----------CCCCCHHHHTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETTEEE
T ss_pred             HHhCccCeEEEEEECCC-C-Chhh---hhccchhhhhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCCeEE
Confidence            99999999999999995 3 3222   2222223345679999999999999987 89999999 7887653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.7e-38  Score=290.01  Aligned_cols=221  Identities=14%  Similarity=0.101  Sum_probs=178.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |++|||||++|||+++|++|+++|++|++++|+.+++          .+.....+.++.++.+|+++.++++++++++.+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL----------STVTNCLSNNVGYRARDLASHQEVEQLFEQLDS   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH----------HHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh
Confidence            6899999999999999999999999999999986531          222233467889999999999999999887754


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .   .|+||||||+....+..                                                           
T Consensus        72 ~---~d~lv~~Ag~~~~~~~~-----------------------------------------------------------   89 (230)
T 3guy_A           72 I---PSTVVHSAGSGYFGLLQ-----------------------------------------------------------   89 (230)
T ss_dssp             C---CSEEEECCCCCCCSCGG-----------------------------------------------------------
T ss_pred             c---CCEEEEeCCcCCCCccc-----------------------------------------------------------
Confidence            4   39999999976544332                                                           


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|++++++|+.++++++++++|+|++++. +||++||..+..+  .++...|++||+|+++|+++++.|++++||
T Consensus        90 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi  166 (230)
T 3guy_A           90 EQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQP--KAQESTYCAVKWAVKGLIESVRLELKGKPM  166 (230)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTTTSSC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCC--CCCCchhHHHHHHHHHHHHHHHHHHHhcCe
Confidence            7889999999999999999999999999998764 9999999999877  478899999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhc-CCCCCccceEEEeh
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILS-SNPPSLTGQFLIDD  308 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s-~~~~~~tG~~i~d~  308 (406)
                      +||+|+||+ +.|++.+.....  .+..++.+|+|+|++++||++ +.+.++||+.+.++
T Consensus       167 ~v~~v~PG~-v~t~~~~~~~~~--~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          167 KIIAVYPGG-MATEFWETSGKS--LDTSSFMSAEDAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             EEEEEEECC-C------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             EEEEEECCc-ccChHHHhcCCC--CCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence            999999996 677665544332  345678899999999999987 77889999999554

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.9e-38  Score=290.71  Aligned_cols=210  Identities=19%  Similarity=0.228  Sum_probs=174.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |+++++|+++||||++|||+++|++|+++|++|++++|+.+                           +|++|+++++++
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------------~D~~~~~~v~~~   53 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------------LDISDEKSVYHY   53 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------------CCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------------cCCCCHHHHHHH
Confidence            46789999999999999999999999999999999998743                           699999999988


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++    +++|+||||||+.....                                                       
T Consensus        54 ~~~~----g~id~lv~nAg~~~~~~-------------------------------------------------------   74 (223)
T 3uce_A           54 FETI----GAFDHLIVTAGSYAPAG-------------------------------------------------------   74 (223)
T ss_dssp             HHHH----CSEEEEEECCCCCCCCS-------------------------------------------------------
T ss_pred             HHHh----CCCCEEEECCCCCCCCC-------------------------------------------------------
Confidence            8754    89999999999863221                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+.+.++|++++++|+.++++++++++|+|+++  |+||++||..+..+  .++...|++||+|+++|+++++.|
T Consensus        75 ---~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e  147 (223)
T 3uce_A           75 ---KVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG--GSITLTSGMLSRKV--VANTYVKAAINAAIEATTKVLAKE  147 (223)
T ss_dssp             ---CTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--EEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC--eEEEEecchhhccC--CCCchHHHHHHHHHHHHHHHHHHh
Confidence               12388999999999999999999999999999764  89999999998877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++  ||||+|+||+ +.|++.+.....          ...+..++.+|+|+|++++||++  ++++||+.+ +|+|..
T Consensus       148 ~~~--i~vn~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~tG~~i~vdgG~~  221 (223)
T 3uce_A          148 LAP--IRVNAISPGL-TKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMTGTVIDVDGGAL  221 (223)
T ss_dssp             HTT--SEEEEEEECS-BCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTTGG
T ss_pred             hcC--cEEEEEEeCC-CcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCCCcEEEecCCee
Confidence            987  9999999996 555443221110          01244567899999999999997  479999999 777653

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-37  Score=298.17  Aligned_cols=238  Identities=27%  Similarity=0.404  Sum_probs=197.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-----cCCeeeeeeecCCChH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-----AGGNCLPCIVDIRDEH   78 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-----~g~~~~~~~~Dl~~~~   78 (406)
                      ..+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++..     .+.++.++.+|+++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLER-------LKSAADELQANLPPTKQARVIPIQCNIRNEE   85 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhccccCCccEEEEecCCCCHH
Confidence            457899999999999999999999999999999999998654       3344555554     4668999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+.+|++|+||||||+....+..                                                
T Consensus        86 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~------------------------------------------------  117 (303)
T 1yxm_A           86 EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAE------------------------------------------------  117 (303)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCchh------------------------------------------------
Confidence            99999999999999999999999975433322                                                


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                                 +.+.++|++++++|+.++++++++++|.+.+++.++||++||.. ..+  .++...|++||+++.++++
T Consensus       118 -----------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~--~~~~~~Y~~sK~a~~~~~~  183 (303)
T 1yxm_A          118 -----------HISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAG--FPLAVHSGAARAGVYNLTK  183 (303)
T ss_dssp             -----------GCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTC--CTTCHHHHHHHHHHHHHHH
T ss_pred             -----------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccC--CCcchhhHHHHHHHHHHHH
Confidence                       67889999999999999999999999976665569999999988 544  4778899999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHH-HHHhc-------CC--CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAA-IEMLT-------GG--SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~-~~~~~-------~~--~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      +++.|++++||+||+|+||+ +.|++ .....       ..  ...+..++.+|+|+|++++||+++.+.++||+++ +|
T Consensus       184 ~la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~  262 (303)
T 1yxm_A          184 SLALEWACSGIRINCVAPGV-IYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVD  262 (303)
T ss_dssp             HHHHHTGGGTEEEEEEEECS-BCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhcccCeEEEEEecCC-cccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEEC
Confidence            99999999999999999996 44432 11110       00  0113345779999999999999988889999999 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      +|..
T Consensus       263 gG~~  266 (303)
T 1yxm_A          263 GGRS  266 (303)
T ss_dssp             TTGG
T ss_pred             CCee
Confidence            7654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=3.6e-38  Score=292.61  Aligned_cols=237  Identities=27%  Similarity=0.384  Sum_probs=197.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+|++|+++||||++|||++++++|+++|++|++++|+.++       .++..+++.. .+.++.++.+|++|+++++++
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGER-------AKAVAEEIANKYGVKAHGVEMNLLSEESINKA   75 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHhhcCCceEEEEccCCCHHHHHHH
Confidence            46889999999999999999999999999999999998653       2233444444 467889999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||.....+..                                                     
T Consensus        76 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~-----------------------------------------------------  102 (248)
T 2pnf_A           76 FEEIYNLVDGIDILVNNAGITRDKLFL-----------------------------------------------------  102 (248)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccc-----------------------------------------------------
Confidence            999999999999999999976543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+.++++|+.++++++++++|.|++++.++||++||..+..+  .++...|++||++++.++++++.|
T Consensus       103 ------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  174 (248)
T 2pnf_A          103 ------RMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG--NVGQVNYSTTKAGLIGFTKSLAKE  174 (248)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC--CCCCchHHHHHHHHHHHHHHHHHH
Confidence                  678899999999999999999999999999888899999999877655  367889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||++|+|+||+ +.|++.......      ...+..++.+|+|+|++++||+++.+.+++|+.+ +++|.
T Consensus       175 ~~~~~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          175 LAPRNVLVNAVAPGF-IETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HGGGTEEEEEEEECS-BCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hcccCeEEEEEEece-ecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            999999999999996 455432211100      0113345779999999999999987789999988 66653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.4e-38  Score=312.78  Aligned_cols=265  Identities=15%  Similarity=0.063  Sum_probs=194.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHH-cCCeEEEEecCCCCCCCCccc-----HHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAK-DGANIVIAAKTAEPHPKLPGT-----IYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~-~Ga~Vvl~~r~~~~~~~~~~~-----i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .+|++|||||++|||+++|++|++ +|++|++++|+.+..++..++     .....+++...|.++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            589999999999999999999999 999999999988765532110     01123556777889999999999999999


Q ss_pred             HHHHHHHHhc-CCccEEEecccccccCCC--------CCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCC
Q psy6113          82 SAVNAAVDKF-GGIDILVNNASAISLTDT--------ANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGG  152 (406)
Q Consensus        82 ~~~~~i~~~~-g~iD~linnAG~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  152 (406)
                      ++++++.++| |+||+||||||+......        ...+..+           .+..                     
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~-----------~~~~---------------------  187 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQ-----------TYTA---------------------  187 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSS-----------CEEE---------------------
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccc-----------cccc---------------------
Confidence            9999999999 999999999997421100        0000000           0000                     


Q ss_pred             cceEeccccccccCCCCCCchhhHHHHHhhhhhHHH-HHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCc--hhhhHh
Q psy6113         153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTY-LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH--VAYTIS  229 (406)
Q Consensus       153 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~as  229 (406)
                       ..+=.+...+....+.+.+.++|++++++|..+.| .+++++++.+...++|+||++||..+..+.  +.+  .+|++|
T Consensus       188 -~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~--p~~~~~aY~AS  264 (422)
T 3s8m_A          188 -TAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW--PIYWHGALGKA  264 (422)
T ss_dssp             -EEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH--HHHTSHHHHHH
T ss_pred             -cccccccccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC--CCccchHHHHH
Confidence             00000011111222347899999999999999998 888887764433345899999999988763  555  899999


Q ss_pred             hHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCcc-c
Q psy6113         230 KYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLT-G  302 (406)
Q Consensus       230 Kaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~t-G  302 (406)
                      |+|+.+|+|+||.||+++|||||+|+||+ +.|++....+..+      ..+.++.++|||+|+.+.||+|+.- |.+ |
T Consensus       265 KaAl~~lTrsLA~Ela~~GIRVNaVaPG~-i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~  342 (422)
T 3s8m_A          265 KVDLDRTAQRLNARLAKHGGGANVAVLKS-VVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDG  342 (422)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECC-CCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTC
T ss_pred             HHHHHHHHHHHHHHhCccCEEEEEEEcCC-CcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh-hccCC
Confidence            99999999999999999999999999996 6665544332111      1256788999999999999999743 654 6


Q ss_pred             eEE-Eehh
Q psy6113         303 QFL-IDDE  309 (406)
Q Consensus       303 ~~i-~d~g  309 (406)
                      +.. +|++
T Consensus       343 ~~~~~d~~  350 (422)
T 3s8m_A          343 QPAEVDEQ  350 (422)
T ss_dssp             CCCCCCTT
T ss_pred             CCcccCCC
Confidence            655 5554

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=4.4e-38  Score=303.25  Aligned_cols=239  Identities=19%  Similarity=0.192  Sum_probs=185.4

Q ss_pred             cccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCCC--------CCCCCcccHHHHHHHHHHcCCe---eeeee
Q psy6113           5 GKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAE--------PHPKLPGTIYSAAKEVEDAGGN---CLPCI   71 (406)
Q Consensus         5 ~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~~--------~~~~~~~~i~~~~~~~~~~g~~---~~~~~   71 (406)
                      ++|+||++|||||  ++|||+++|++|+++|++|++++|+..        ....    +++. .++. .+..   +.++.
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~----~~~~-~~~~-~~~~~~~~~~~~   78 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGR----LDED-RKLP-DGSLIEFAGVYP   78 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTT----THHH-HBCT-TSCBCCCSCEEE
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhh----hhhh-hhhh-cccccccccccc
Confidence            4589999999999  899999999999999999999987531        0000    0111 1111 1211   22333


Q ss_pred             ------------ecCCC--------hHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEE
Q psy6113          72 ------------VDIRD--------EHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV  131 (406)
Q Consensus        72 ------------~Dl~~--------~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (406)
                                  +|+++        +++++++++++.+++|++|+||||||+.....                       
T Consensus        79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~-----------------------  135 (315)
T 2o2s_A           79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVT-----------------------  135 (315)
T ss_dssp             CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTT-----------------------
T ss_pred             ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCC-----------------------
Confidence                        34443        67899999999999999999999999753100                       


Q ss_pred             eccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCC
Q psy6113         132 KASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISP  211 (406)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS  211 (406)
                                                        .++.+.+.++|++++++|+.++++++++++|+|+++  |+||++||
T Consensus       136 ----------------------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~Iv~isS  179 (315)
T 2o2s_A          136 ----------------------------------KPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEG--GSAVTLSY  179 (315)
T ss_dssp             ----------------------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEE--EEEEEEEE
T ss_pred             ----------------------------------CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CEEEEEec
Confidence                                              112378899999999999999999999999999764  89999999


Q ss_pred             CCCCCCCccCCc-hhhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHhcCCC--------------ccc
Q psy6113         212 PLNLNPFWFKNH-VAYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEMLTGGS--------------ADA  275 (406)
Q Consensus       212 ~~~~~~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~~~--------------~~~  275 (406)
                      ..+..+  .+++ ..|++||+|+.+|+++++.|+++ +|||||+|+||+ +.|++.+......              ..+
T Consensus       180 ~~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p  256 (315)
T 2o2s_A          180 LAAERV--VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGP-LKSRAASAIGKSGEKSFIDYAIDYSYNNAP  256 (315)
T ss_dssp             GGGTSC--CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECC-CCCHHHHHTTCSSSSCHHHHHHHHHHHHSS
T ss_pred             cccccc--CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccc-ccchhhhhccccccchhHHHHHHHHhccCC
Confidence            988876  3566 58999999999999999999985 899999999996 6676655433110              124


Q ss_pred             ccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         276 KATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       276 ~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ..+..+|+|+|++++||+++.+.++||+++ +|+|+.
T Consensus       257 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          257 LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            456789999999999999998999999999 777754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-37  Score=291.18  Aligned_cols=239  Identities=23%  Similarity=0.325  Sum_probs=197.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC--CeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG--GNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g--~~~~~~~~Dl~~~~~v~   81 (406)
                      |.+|++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+  .++.++.+|++|+++++
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   99 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN-------IEELAAECKSAGYPGTLIPYRCDLSNEEDIL   99 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCSSEEEEEECCTTCHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHH-------HHHHHHHHHhcCCCceEEEEEecCCCHHHHH
Confidence            457899999999999999999999999999999999998653       334455565554  56888999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+.++++|+||||||+....+..                                                   
T Consensus       100 ~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~---------------------------------------------------  128 (279)
T 1xg5_A          100 SMFSAIRSQHSGVDICINNAGLARPDTLL---------------------------------------------------  128 (279)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCCCCTT---------------------------------------------------
T ss_pred             HHHHHHHHhCCCCCEEEECCCCCCCCCcc---------------------------------------------------
Confidence            99999999999999999999986543332                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC--CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH--AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~--g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                              +.+.++|+.++++|+.+++.+++.++|.|++++.  ++||++||..+....+.++...|++||++++.|+++
T Consensus       129 --------~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  200 (279)
T 1xg5_A          129 --------SGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEG  200 (279)
T ss_dssp             --------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHH
Confidence                    7889999999999999999999999999998764  899999999887322246778999999999999999


Q ss_pred             HHHhhc--CCCeEEEEecchhhhhHHHHHHhcCCCc------ccccccCChhhHHHHHHHhhcCCCCCccceEEEehh
Q psy6113         240 MAEEFK--GDNIAVNALWPRTAIYTAAIEMLTGGSA------DAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDE  309 (406)
Q Consensus       240 la~e~~--~~gI~vn~v~PG~~~~t~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g  309 (406)
                      ++.|++  +.||+||+|+||+ +.|++.........      .+..++.+|+|+|++++||++++..+.+|++.++++
T Consensus       201 la~e~~~~~~~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~~g~i~i~~~  277 (279)
T 1xg5_A          201 LRQELREAQTHIRATCISPGV-VETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPT  277 (279)
T ss_dssp             HHHHHHHTTCCCEEEEEEESC-BCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEET
T ss_pred             HHHHHhhcCCCeEEEEEecCc-ccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcceEeeeEEEccC
Confidence            999998  8899999999996 55555322211110      123456799999999999999888888998876654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.3e-37  Score=293.86  Aligned_cols=240  Identities=21%  Similarity=0.275  Sum_probs=196.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|++|+++||||++|||+++|++|+++|++|++++|+.+.       .++..+++.. ..++.++.+|++|+++++++
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   82 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDH-------GQKVCNNIGS-PDVISFVHCDVTKDEDVRNL   82 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHCC-TTTEEEEECCTTCHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhH-------HHHHHHHhCC-CCceEEEECCCCCHHHHHHH
Confidence            457899999999999999999999999999999999997543       1222333321 23688999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+.....                                                       
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~~~~-------------------------------------------------------  107 (278)
T 2bgk_A           83 VDTTIAKHGKLDIMFGNVGVLSTTP-------------------------------------------------------  107 (278)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSC-------------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCC-------------------------------------------------------
Confidence            9999999999999999999764321                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccC-CchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK-NHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~-~~~~Y~asKaal~~l~~~la~  242 (406)
                        .++.+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+.  + +...|++||++++.++++++.
T Consensus       108 --~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~  183 (278)
T 2bgk_A          108 --YSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG--EGVSHVYTATKHAVLGLTTSLCT  183 (278)
T ss_dssp             --SSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC--TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             --CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC--CCCCcchHHHHHHHHHHHHHHHH
Confidence              11237888999999999999999999999999999888999999999888763  4 678999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++||+||+|+||+ +.|++........           ..+..++.+|+|+|++++||+++.+.+++|+.+ +|+|.
T Consensus       184 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  262 (278)
T 2bgk_A          184 ELGEYGIRVNCVSPYI-VASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGY  262 (278)
T ss_dssp             HHGGGTEEEEEEEESC-CSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhhcCcEEEEEEece-ecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcc
Confidence            9999999999999996 4553322111100           012345789999999999999988889999998 77765


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      .
T Consensus       263 ~  263 (278)
T 2bgk_A          263 T  263 (278)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2e-37  Score=287.17  Aligned_cols=230  Identities=26%  Similarity=0.312  Sum_probs=188.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++|+||+++||||++|||++++++|+++|++|++++|+.++       +++..++   . ....++.+|++|+++++++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~---~-~~~~~~~~D~~~~~~~~~~   70 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD-------LDSLVRE---C-PGIEPVCVDLGDWEATERA   70 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHH---S-TTCEEEECCTTCHHHHHHH
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHH---c-CCCCEEEEeCCCHHHHHHH
Confidence            357899999999999999999999999999999999997643       1122221   1 2345678999999998887


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++    .++++|+||||||+....+.                                                      
T Consensus        71 ~~----~~~~id~vi~~Ag~~~~~~~------------------------------------------------------   92 (244)
T 3d3w_A           71 LG----SVGPVDLLVNNAAVALLQPF------------------------------------------------------   92 (244)
T ss_dssp             HT----TCCCCCEEEECCCCCCCBCG------------------------------------------------------
T ss_pred             HH----HcCCCCEEEECCccCCCcch------------------------------------------------------
Confidence            76    67899999999997643332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           .+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..+  .++...|++||++++.++++++.
T Consensus        93 -----~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~  165 (244)
T 3d3w_A           93 -----LEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA--VTNHSVYCSTKGALDMLTKVMAL  165 (244)
T ss_dssp             -----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC--CCCCchHHHHHHHHHHHHHHHHH
Confidence                 2778899999999999999999999999999876 799999999988876  46788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++||+||+|+||+ +.|++........        ..+..++.+|+|+|+++++|+++.+.+++|+++ +++|+
T Consensus       166 e~~~~~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          166 ELGPHKIRVNAVNPTV-VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHGGGTEEEEEEEECC-BTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HhcccCeEEEEEEecc-ccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            9999999999999996 5554443221111        013456779999999999999987889999988 77764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=5.4e-37  Score=282.62  Aligned_cols=225  Identities=27%  Similarity=0.361  Sum_probs=183.6

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ..+|+++||||++|||++++++|+++|++|++++|+.++       +++..+++    .++.++.+|++|++++++++++
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   71 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKR-------LQALAAEL----EGALPLPGDVREEGDWARAVAA   71 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHS----TTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHh----hhceEEEecCCCHHHHHHHHHH
Confidence            357999999999999999999999999999999997543       11222221    2678899999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|+||||||+....+.                                                         
T Consensus        72 ~~~~~~~id~li~~Ag~~~~~~~---------------------------------------------------------   94 (234)
T 2ehd_A           72 MEEAFGELSALVNNAGVGVMKPV---------------------------------------------------------   94 (234)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCG---------------------------------------------------------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCc---------------------------------------------------------
Confidence            99999999999999997643332                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                        .+.+.++|+.++++|+.+++.+++.++|.|++++.++||++||..+..+  .++...|++||++++.++++++.|+++
T Consensus        95 --~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~  170 (234)
T 2ehd_A           95 --HELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP--FKGGAAYNASKFGLLGLAGAAMLDLRE  170 (234)
T ss_dssp             --GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             --ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC--CCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence              2778899999999999999999999999999988899999999998876  477889999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDE  309 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g  309 (406)
                      +||++|+|+||+ +.|++.......     ....+|+|+|++++|++++++.+++|++++..+
T Consensus       171 ~gi~v~~v~Pg~-v~t~~~~~~~~~-----~~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          171 ANVRVVNVLPGS-VDTGFAGNTPGQ-----AWKLKPEDVAQAVLFALEMPGHAMVSEIELRPT  227 (234)
T ss_dssp             GTEEEEEEECC----------------------CCHHHHHHHHHHHHHSCCSSCCCEEECCC-
T ss_pred             cCcEEEEEEeCC-CcCCcccccccc-----cCCCCHHHHHHHHHHHhCCCcccccceEEEeec
Confidence            999999999996 566554332111     115799999999999999989999999886544

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.3e-37  Score=288.66  Aligned_cols=235  Identities=24%  Similarity=0.292  Sum_probs=197.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-CCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT-AEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~-~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+|++|+++||||++|||++++++|+++|++|++++|+ .++       +++..+++...+.++.++.+|++|+++++++
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN-------IDETIASMRADGGDAAFFAADLATSEACQQL   75 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-------HHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhh-------HHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            46899999999999999999999999999999999998 543       3445566666678899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccc-cccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASA-ISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ++++.+.++++|+||||||+ ....+.                                                     
T Consensus        76 ~~~~~~~~g~id~vi~~Ag~~~~~~~~-----------------------------------------------------  102 (258)
T 3afn_B           76 VDEFVAKFGGIDVLINNAGGLVGRKPL-----------------------------------------------------  102 (258)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCCCCG-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCcCcc-----------------------------------------------------
Confidence            99999999999999999997 332222                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--C---CeEEEeCCCCCCC-CCccCCchhhhHhhHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--H---AHILNISPPLNLN-PFWFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~---g~Iv~vsS~~~~~-~~~~~~~~~Y~asKaal~~l  236 (406)
                            .+.+.++|+.++++|+.+++.++++++|+|++++  .   ++||++||..+.. +  .++...|++||++++.+
T Consensus       103 ------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~~~Y~~sK~a~~~~  174 (258)
T 3afn_B          103 ------PEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG--GPGAGLYGAAKAFLHNV  174 (258)
T ss_dssp             ------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC--CTTCHHHHHHHHHHHHH
T ss_pred             ------ccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC--CCCchHHHHHHHHHHHH
Confidence                  2678899999999999999999999999998654  3   8999999988765 4  36788999999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhHHHHHH--------hcCCCcccccccCChhhHHHHHHHhhcCCCC-CccceEE-E
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEM--------LTGGSADAKATSRKPEIMADAAYYILSSNPP-SLTGQFL-I  306 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~--------~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~-~~tG~~i-~  306 (406)
                      +++++.|++++||+||+|+||+ +.|++...        +..  ..+..++.+|+|+|+++++|+++.+. +++|+++ +
T Consensus       175 ~~~~~~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v  251 (258)
T 3afn_B          175 HKNWVDFHTKDGVRFNIVSPGT-VDTAFHADKTQDVRDRISN--GIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDI  251 (258)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECS-BSSGGGTTCCHHHHHHHHT--TCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEE
T ss_pred             HHHHHHhhcccCeEEEEEeCCC-cccccccccCHHHHHHHhc--cCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeE
Confidence            9999999999999999999996 45543221        111  12345678999999999999987666 8999988 7


Q ss_pred             ehhH
Q psy6113         307 DDEV  310 (406)
Q Consensus       307 d~g~  310 (406)
                      ++|.
T Consensus       252 ~gg~  255 (258)
T 3afn_B          252 NGGQ  255 (258)
T ss_dssp             STTS
T ss_pred             CCCc
Confidence            7664

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-37  Score=289.86  Aligned_cols=223  Identities=21%  Similarity=0.254  Sum_probs=182.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.+           ..++   .+ ++.++ +|+  .++++++
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------~~~~---~~-~~~~~-~D~--~~~~~~~   75 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-----------LLKR---SG-HRYVV-CDL--RKDLDLL   75 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-----------HHHH---TC-SEEEE-CCT--TTCHHHH
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HHHh---hC-CeEEE-eeH--HHHHHHH
Confidence            34789999999999999999999999999999999999752           1122   23 56667 999  5566666


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++    .++|+||||||+....+.                                                      
T Consensus        76 ~~~~----~~iD~lv~~Ag~~~~~~~------------------------------------------------------   97 (249)
T 1o5i_A           76 FEKV----KEVDILVLNAGGPKAGFF------------------------------------------------------   97 (249)
T ss_dssp             HHHS----CCCSEEEECCCCCCCBCG------------------------------------------------------
T ss_pred             HHHh----cCCCEEEECCCCCCCCCh------------------------------------------------------
Confidence            6654    489999999997644332                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .+.+.++|++++++|+.+++.++++++|+|++++.++||++||..+..+  .++...|++||+++++|+++++.|
T Consensus        98 -----~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e  170 (249)
T 1o5i_A           98 -----DELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP--IENLYTSNSARMALTGFLKTLSFE  170 (249)
T ss_dssp             -----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC--CCCCchHHHHHHHHHHHHHHHHHH
Confidence                 2788999999999999999999999999999988899999999998876  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++||+||+|+||+ +.|++.....+.       ...+..++.+|+|+|++++||+++.+.++||+++ +|+|.
T Consensus       171 ~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          171 VAPYGITVNCVAPGW-TETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             HGGGTEEEEEEEECS-BCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hhhcCeEEEEEeeCC-CccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            999999999999996 555544322110       0123456779999999999999988899999999 77664

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=5.2e-38  Score=299.30  Aligned_cols=227  Identities=18%  Similarity=0.244  Sum_probs=180.8

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++++|+||+++||||++|||+++|++|+++|++|++++|+.++.          .+.....+.++.++.+|++|++++++
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG----------EAAARTMAGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------HHHHTTSSSEEEEEECCTTCHHHHHH
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH----------HHHHHHhcCCeeEEEcCCCCHHHHHH
Confidence            46789999999999999999999999999999999999986532          22223346789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++    +++|+||||||+..+.  .                                                    
T Consensus        80 ~~~~~----~~iD~lv~nAg~~~~~--~----------------------------------------------------  101 (291)
T 3rd5_A           80 FADGV----SGADVLINNAGIMAVP--Y----------------------------------------------------  101 (291)
T ss_dssp             HHHTC----CCEEEEEECCCCCSCC--C----------------------------------------------------
T ss_pred             HHHhc----CCCCEEEECCcCCCCc--c----------------------------------------------------
Confidence            88766    7999999999986422  1                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------ccCCchhhhHhhH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------WFKNHVAYTISKY  231 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------~~~~~~~Y~asKa  231 (406)
                             +.+.++|+.++++|+.|+++++++++|+|.+    +||++||..+..+.           ++++...|++||+
T Consensus       102 -------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A          102 -------ALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             -------CBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccccCCCCcchHHHHHH
Confidence                   6678889999999999999999999999974    89999998877542           1356789999999


Q ss_pred             HHHHHHHHHHHhhcCCC--eEEEEecchhhhhHHHHHHhcCCC-----cccccccC-ChhhHHHHHHHhhcCCCCCccce
Q psy6113         232 GMSMCALGMAEEFKGDN--IAVNALWPRTAIYTAAIEMLTGGS-----ADAKATSR-KPEIMADAAYYILSSNPPSLTGQ  303 (406)
Q Consensus       232 al~~l~~~la~e~~~~g--I~vn~v~PG~~~~t~~~~~~~~~~-----~~~~~~~~-~pe~vA~~v~~L~s~~~~~~tG~  303 (406)
                      |+++|+++++.|++++|  |+||+|+||+ +.|++.+......     ..+..+.. +|+|+|++++||+++  +++||+
T Consensus       171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~--~~~~G~  247 (291)
T 3rd5_A          171 ANLLFTSELQRRLTAAGSPLRALAAHPGY-SHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQ--DLPGDS  247 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCSG-GGSCC--------------------CHHHHHHHHHHHHHHHS--CCCTTC
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEEEeeCCC-CccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcC--CCCCCc
Confidence            99999999999999888  9999999996 5665554432211     11223333 499999999999997  389999


Q ss_pred             EE-EehhHH
Q psy6113         304 FL-IDDEVL  311 (406)
Q Consensus       304 ~i-~d~g~~  311 (406)
                      ++ +|+|+.
T Consensus       248 ~~~vdgG~~  256 (291)
T 3rd5_A          248 FVGPRFGYL  256 (291)
T ss_dssp             EEEETTSSS
T ss_pred             eeCCccccc
Confidence            99 666554

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6e-37  Score=295.83  Aligned_cols=225  Identities=16%  Similarity=0.271  Sum_probs=186.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC--eeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG--NCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~--~~~~~~~Dl~~~~~v~   81 (406)
                      |++++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.  ++.++.+|++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~   75 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDS-------IDKALATLEAEGSGPEVMGVQLDVASREGFK   75 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHTCGGGEEEEECCTTCHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCCeEEEEECCCCCHHHHH
Confidence            567899999999999999999999999999999999998764       3445666666555  7899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++.+.+.++++|+||||||+....+..                                                   
T Consensus        76 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~---------------------------------------------------  104 (319)
T 3ioy_A           76 MAADEVEARFGPVSILCNNAGVNLFQPIE---------------------------------------------------  104 (319)
T ss_dssp             HHHHHHHHHTCCEEEEEECCCCCCCCCGG---------------------------------------------------
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCCcc---------------------------------------------------
Confidence            99999999999999999999986544333                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~  235 (406)
                              +.+.++|+.++++|+.|+++++++++|+|.++      +.|+||++||.++..+  .+++..|++||+|+++
T Consensus       105 --------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~--~~~~~~Y~aSKaal~~  174 (319)
T 3ioy_A          105 --------ESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA--AGSPGIYNTTKFAVRG  174 (319)
T ss_dssp             --------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC--CSSSHHHHHHHHHHHH
T ss_pred             --------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC--CCCCHHHHHHHHHHHH
Confidence                    78899999999999999999999999999875      5799999999999887  4788999999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCc------------------ccccccCChhhHHHHHHHhhcCCC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSA------------------DAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~------------------~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      |+++++.|++++||+||+|+||+ +.|++.........                  .......+|+++|+.++.++....
T Consensus       175 ~~~~la~e~~~~gi~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          175 LSESLHYSLLKYEIGVSVLCPGL-VKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHGGGTCEEEEECCCC-BC-----------------------------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhhhcCCEEEEEEcCe-EccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence            99999999999999999999996 56655432211100                  000112689999999999887543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.7e-37  Score=287.46  Aligned_cols=233  Identities=27%  Similarity=0.365  Sum_probs=195.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeee-eeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLP-CIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~-~~~Dl~~~~~v~~~~~~   86 (406)
                      +|+++||||++|||+++|++|+++|++|+++ +|+.++       .++..+++...+.++.. +.+|++|.+++++++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREK-------AEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQ   73 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHH-------HHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Confidence            5799999999999999999999999999998 777543       33445556666667777 89999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+.++++|+||||||+....+..                                                        
T Consensus        74 ~~~~~~~~d~li~~Ag~~~~~~~~--------------------------------------------------------   97 (245)
T 2ph3_A           74 AAEVLGGLDTLVNNAGITRDTLLV--------------------------------------------------------   97 (245)
T ss_dssp             HHHHHTCCCEEEECCCCCCCBCGG--------------------------------------------------------
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcc--------------------------------------------------------
Confidence            999999999999999976543322                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|+.++++|+.+++.++++++|.|++++.++||++||..+..+  .++...|++||++++.++++++.|+++
T Consensus        98 ---~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~  172 (245)
T 2ph3_A           98 ---RMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG--NPGQANYVASKAGLIGFTRAVAKEYAQ  172 (245)
T ss_dssp             ---GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--CSSBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ---cCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC--CCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence               778899999999999999999999999999888899999999887665  367889999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +||++|+|+||+ +.|++.+...+.      ...+..++.+|+|+|+++++|+++.+.+++|+++ +++|.
T Consensus       173 ~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          173 RGITVNAVAPGF-IETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             GTEEEEEEEECS-BCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             cCeEEEEEEEEe-ecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            999999999996 566554432110      0113345679999999999999987789999998 66653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-37  Score=289.26  Aligned_cols=225  Identities=25%  Similarity=0.360  Sum_probs=184.6

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++       ..+..+++...  +.++.++.+|++|++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA-------GVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF   77 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence            689999999999999999999999999999999998653       22233344332  446889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+.+.+|++|+||||||+..                                                           
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~~-----------------------------------------------------------   98 (267)
T 2gdz_A           78 RKVVDHFGRLDILVNNAGVNN-----------------------------------------------------------   98 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-----------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCC-----------------------------------------------------------
Confidence            999999999999999999531                                                           


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHH-
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM-  240 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~l-  240 (406)
                              .++|++++++|+.+++.+++.++|+|++++   .++||++||..+..+  .++...|++||++++++++++ 
T Consensus        99 --------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a  168 (267)
T 2gdz_A           99 --------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP--VAQQPVYCASKHGIVGFTRSAA  168 (267)
T ss_dssp             --------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             --------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC--CCCCchHHHHHHHHHHHHHHHH
Confidence                    345889999999999999999999998764   689999999998876  467889999999999999995 


Q ss_pred             -HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--c----------ccc--cccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         241 -AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--A----------DAK--ATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       241 -a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--~----------~~~--~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                       +.|++++|||||+|+||+ +.|++........  .          .+.  .++.+|+|+|++++||+++.  ++||+.+
T Consensus       169 la~e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~--~~~G~~~  245 (267)
T 2gdz_A          169 LAANLMNSGVRLNAICPGF-VNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD--ALNGAIM  245 (267)
T ss_dssp             HHHHHHTCCEEEEEEEESC-BSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT--TCSSCEE
T ss_pred             HHHHhccCCcEEEEEecCc-CcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCc--CCCCcEE
Confidence             689999999999999996 5666654332110  0          011  22569999999999999874  4999999


Q ss_pred             -EehhH
Q psy6113         306 -IDDEV  310 (406)
Q Consensus       306 -~d~g~  310 (406)
                       +++|.
T Consensus       246 ~v~gg~  251 (267)
T 2gdz_A          246 KITTSK  251 (267)
T ss_dssp             EEETTT
T ss_pred             EecCCC
Confidence             66543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-36  Score=292.78  Aligned_cols=196  Identities=20%  Similarity=0.261  Sum_probs=166.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.....  .+.++...+.+...+.++.++.+|++|++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~--~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRN--ASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTT--HHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccC--HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHH
Confidence            3578999999999999999999999999999999999753322  12344455556667888999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|++|+||||||+....+..                                                      
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~~~~~------------------------------------------------------  104 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVFGPAE------------------------------------------------------  104 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBCSCGG------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChh------------------------------------------------------
Confidence            99999999999999999987544333                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+. .++...|++||+|+++|+++++.|+
T Consensus       105 -----~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~-~~~~~~Y~asKaa~~~~~~~la~el  178 (324)
T 3u9l_A          105 -----AFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT-PPYLAPYFAAKAAMDAIAVQYAREL  178 (324)
T ss_dssp             -----GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC-CCcchhHHHHHHHHHHHHHHHHHHh
Confidence                 7899999999999999999999999999999999999999999887542 3667899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTA  263 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~  263 (406)
                      +++||+||+|+||+ +.|+
T Consensus       179 ~~~gI~v~~v~PG~-v~t~  196 (324)
T 3u9l_A          179 SRWGIETSIIVPGA-FTSG  196 (324)
T ss_dssp             HTTTEEEEEEEECC-C---
T ss_pred             hhhCcEEEEEECCc-cccC
Confidence            99999999999996 4543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-36  Score=281.65  Aligned_cols=230  Identities=26%  Similarity=0.350  Sum_probs=188.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|++|+++||||++|||++++++|+++|++|++++|+.++.       ++..+   . ...+.++.+|+++++++++++
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~~~---~-~~~~~~~~~D~~~~~~~~~~~   71 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL-------VSLAK---E-CPGIEPVCVDLGDWDATEKAL   71 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHH---H-STTCEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHH---h-ccCCCcEEecCCCHHHHHHHH
Confidence            468999999999999999999999999999999999976431       11111   1 123556799999999988877


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +    .++++|+||||||+....+.                                                       
T Consensus        72 ~----~~~~id~vi~~Ag~~~~~~~-------------------------------------------------------   92 (244)
T 1cyd_A           72 G----GIGPVDLLVNNAALVIMQPF-------------------------------------------------------   92 (244)
T ss_dssp             T----TCCCCSEEEECCCCCCCBCG-------------------------------------------------------
T ss_pred             H----HcCCCCEEEECCcccCCCCc-------------------------------------------------------
Confidence            6    67899999999997653332                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          .+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+..+  .++...|++||++++.++++++.|
T Consensus        93 ----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~~  166 (244)
T 1cyd_A           93 ----LEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT--FPNLITYSSTKGAMTMLTKAMAME  166 (244)
T ss_dssp             ----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC--CCCcchhHHHHHHHHHHHHHHHHH
Confidence                2778899999999999999999999999999877 799999999988876  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++||++|+|+||+ +.|++........        ..+..++.+|+|+|+++++|+++.+.+++|+.+ +|+|+.
T Consensus       167 ~~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          167 LGPHKIRVNSVNPTV-VLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             HGGGTEEEEEEEECC-BTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             hhhcCeEEEEEecCc-ccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence            999999999999996 5555544221110        113356779999999999999988889999998 777753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=9.5e-37  Score=288.90  Aligned_cols=219  Identities=21%  Similarity=0.274  Sum_probs=183.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++          .+.....+.++.++.+|++|+++++++++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   71 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL----------DDLVAAYPDRAEAISLDVTDGERIDVVAA   71 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG----------HHHHHHCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------HHHHHhccCCceEEEeeCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999987642          22233446789999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|+||||||+....+..                                                       
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~~~~~~-------------------------------------------------------   96 (281)
T 3m1a_A           72 DVLARYGRVDVLVNNAGRTQVGAFE-------------------------------------------------------   96 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCEEECCTT-------------------------------------------------------
T ss_pred             HHHHhCCCCCEEEECCCcCCCCChh-------------------------------------------------------
Confidence            9999999999999999987554433                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.++|+.++++|+.|+++++++++|+|++++.++||++||..+..+  .++...|++||+++++++++++.|++
T Consensus        97 ----~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~  170 (281)
T 3m1a_A           97 ----ETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS--FAGFSAYSATKAALEQLSEGLADEVA  170 (281)
T ss_dssp             ----TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC--CCCchHHHHHHHHHHHHHHHHHHHhh
Confidence                888999999999999999999999999999988899999999999877  47889999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhc----CCC---------------cccccccCChhhHHHHHHHhhcCC
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLT----GGS---------------ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~----~~~---------------~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++||+||+|+||+ +.|++.....    ...               ..+..++.+|+|+|++++++++++
T Consensus       171 ~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          171 PFGIKVLIVEPGA-FRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             GGTEEEEEEEECC-BCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSS
T ss_pred             ccCcEEEEEecCc-cccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999996 5554322100    000               012244678999999999999764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.3e-36  Score=283.66  Aligned_cols=224  Identities=17%  Similarity=0.185  Sum_probs=185.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCCh-HHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDE-HAV   80 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~-~~v   80 (406)
                      |+|+||+++||||++|||+++|++|+++|++ |++++|+.+.         +..+++.+.  +.++.++.+|++|+ +++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~---------~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   71 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP---------TALAELKAINPKVNITFHTYDVTVPVAES   71 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH---------HHHHHHHHHCTTSEEEEEECCTTSCHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH---------HHHHHHHHhCCCceEEEEEEecCCChHHH
Confidence            3689999999999999999999999999997 9999998642         122333333  55788999999998 999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      +++++++.+.++++|+||||||+.                                                        
T Consensus        72 ~~~~~~~~~~~g~id~lv~~Ag~~--------------------------------------------------------   95 (254)
T 1sby_A           72 KKLLKKIFDQLKTVDILINGAGIL--------------------------------------------------------   95 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC--------------------------------------------------------
T ss_pred             HHHHHHHHHhcCCCCEEEECCccC--------------------------------------------------------
Confidence            999999999999999999999953                                                        


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                                 +.++|+.++++|+.+++.++++++|+|.+++   .|+||++||..+..+  .++...|++||+++++|+
T Consensus        96 -----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~  162 (254)
T 1sby_A           96 -----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA--IHQVPVYSASKAAVVSFT  162 (254)
T ss_dssp             -----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--CTTSHHHHHHHHHHHHHH
T ss_pred             -----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC--CCCchHHHHHHHHHHHHH
Confidence                       2356889999999999999999999998764   589999999998876  477889999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC---Ccc-----cccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG---SAD-----AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~---~~~-----~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      ++++.|++++||+||+|+||+ +.|++.+.....   ...     ...+..+|+|+|+.++++++   .+++|+++ +|+
T Consensus       163 ~~la~~~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~---~~~~G~~~~v~g  238 (254)
T 1sby_A          163 NSLAKLAPITGVTAYSINPGI-TRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE---ANKNGAIWKLDL  238 (254)
T ss_dssp             HHHHHHHHHHSEEEEEEEECS-EESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH---HCCTTCEEEEET
T ss_pred             HHHHHHhccCCeEEEEEecCC-ccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHH---cCCCCCEEEEeC
Confidence            999999988899999999996 677665532110   000     01123489999999999996   47899998 777


Q ss_pred             hH
Q psy6113         309 EV  310 (406)
Q Consensus       309 g~  310 (406)
                      |.
T Consensus       239 G~  240 (254)
T 1sby_A          239 GT  240 (254)
T ss_dssp             TE
T ss_pred             Cc
Confidence            75

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1e-36  Score=286.99  Aligned_cols=237  Identities=22%  Similarity=0.338  Sum_probs=197.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++++|+++||||++|||++++++|+++|++|++++|+...      .+++..+++...+.++.++.+|++|+++++++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSK------AAEEVVAELKKLGAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            357899999999999999999999999999999999994221      13344566666678899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.++++++|+||||||+....+..                                                     
T Consensus        90 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~-----------------------------------------------------  116 (274)
T 1ja9_A           90 FDKAVSHFGGLDFVMSNSGMEVWCDEL-----------------------------------------------------  116 (274)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCCCCCGG-----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcccc-----------------------------------------------------
Confidence            999999999999999999986543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-CCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                            +.+.++|+.++++|+.++++++++++|+|++ + ++||++||..+. .+  .++...|++||++++.++++++.
T Consensus       117 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~  186 (274)
T 1ja9_A          117 ------EVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTG--IPNHALYAGSKAAVEGFCRAFAV  186 (274)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCS--CCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCC--CCCCchHHHHHHHHHHHHHHHHH
Confidence                  7788999999999999999999999999983 3 899999999887 54  36788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhc---------CCC----------cccccccCChhhHHHHHHHhhcCCCCCccce
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLT---------GGS----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQ  303 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~---------~~~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~  303 (406)
                      |++++||++|+|+||+ +.|++.....         ...          ..+..++.+|+|+|+++++|+++.+.+++|+
T Consensus       187 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~  265 (274)
T 1ja9_A          187 DCGAKGVTVNCIAPGG-VKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQ  265 (274)
T ss_dssp             HHGGGTCEEEEEEECC-BSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HhhhcCeEEEEEeeCc-ccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCc
Confidence            9999999999999996 5565544210         000          0123456799999999999999878899999


Q ss_pred             EE-EehhH
Q psy6113         304 FL-IDDEV  310 (406)
Q Consensus       304 ~i-~d~g~  310 (406)
                      .+ +++|+
T Consensus       266 ~~~v~gG~  273 (274)
T 1ja9_A          266 VIKLTGGG  273 (274)
T ss_dssp             EEEESTTC
T ss_pred             EEEecCCc
Confidence            88 77663

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-36  Score=278.77  Aligned_cols=223  Identities=22%  Similarity=0.280  Sum_probs=183.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |++|+++||||++|||++++++|+++|  ++|++++|+.++.+           ++.. .+.++.++.+|++++++++++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~-----------~l~~~~~~~~~~~~~D~~~~~~~~~~   69 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-----------ELKSIKDSRVHVLPLTVTCDKSLDTF   69 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-----------HHHTCCCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH-----------HHHhccCCceEEEEeecCCHHHHHHH
Confidence            468999999999999999999999999  99999999876532           1122 256789999999999999999


Q ss_pred             HHHHHHhcC--CccEEEecccccc-cCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          84 VNAAVDKFG--GIDILVNNASAIS-LTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        84 ~~~i~~~~g--~iD~linnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      ++++.+.++  ++|+||||||+.. ..+.                                                   
T Consensus        70 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~---------------------------------------------------   98 (250)
T 1yo6_A           70 VSKVGEIVGSDGLSLLINNAGVLLSYGTN---------------------------------------------------   98 (250)
T ss_dssp             HHHHHHHHGGGCCCEEEECCCCCCCBCTT---------------------------------------------------
T ss_pred             HHHHHHhcCCCCCcEEEECCcccCCCccc---------------------------------------------------
Confidence            999999998  9999999999865 3222                                                   


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------C-----CCeEEEeCCCCCCCCCcc-----CCch
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------N-----HAHILNISPPLNLNPFWF-----KNHV  224 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~-----~g~Iv~vsS~~~~~~~~~-----~~~~  224 (406)
                              .+.+.++|+.++++|+.+++.++++++|+|+++      +     .++||++||..+..+...     ++..
T Consensus        99 --------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~  170 (250)
T 1yo6_A           99 --------TEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVL  170 (250)
T ss_dssp             --------SCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBH
T ss_pred             --------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCcc
Confidence                    378899999999999999999999999999887      5     799999999988765311     4678


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      .|++||++++.|+++++.|++++||+||+|+||+ +.|++.+.         ....+|+|+|+.+++++++...+++|++
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~-v~t~~~~~---------~~~~~~~~~a~~~~~~~~~~~~~~~G~~  240 (250)
T 1yo6_A          171 AYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGW-VQTNLGGK---------NAALTVEQSTAELISSFNKLDNSHNGRF  240 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCC-C----------------------HHHHHHHHHHHTTCCGGGTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCc-eecCCCCC---------CCCCCHHHHHHHHHHHHhcccccCCCeE
Confidence            9999999999999999999999999999999996 56655421         2457899999999999998888899999


Q ss_pred             E-Eehh
Q psy6113         305 L-IDDE  309 (406)
Q Consensus       305 i-~d~g  309 (406)
                      + +|+|
T Consensus       241 ~~~~g~  246 (250)
T 1yo6_A          241 FMRNLK  246 (250)
T ss_dssp             EETTEE
T ss_pred             EEECCc
Confidence            9 5554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=5e-37  Score=293.31  Aligned_cols=236  Identities=19%  Similarity=0.213  Sum_probs=181.6

Q ss_pred             cccCCcEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCC-----------CCCCCCcccHHHHHHHHHHcCC---eee
Q psy6113           5 GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTA-----------EPHPKLPGTIYSAAKEVEDAGG---NCL   68 (406)
Q Consensus         5 ~~l~gk~alVTGas--~GIG~aia~~La~~Ga~Vvl~~r~~-----------~~~~~~~~~i~~~~~~~~~~g~---~~~   68 (406)
                      ++|+||++|||||+  +|||+++|++|+++|++|++++|+.           ++++++        +++.. +.   ...
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~   74 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS--------RVLPD-GSLMEIKK   74 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG--------GBCTT-SSBCCEEE
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh--------hhhcc-cccccccc
Confidence            56899999999999  9999999999999999999998642           222211        11111 11   012


Q ss_pred             eeee------------cCCC--------hHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccc
Q psy6113          69 PCIV------------DIRD--------EHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT  128 (406)
Q Consensus        69 ~~~~------------Dl~~--------~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (406)
                      .+.+            |++|        +++++++++++.+++|++|+||||||+.....                    
T Consensus        75 ~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~--------------------  134 (297)
T 1d7o_A           75 VYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVS--------------------  134 (297)
T ss_dssp             EEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTT--------------------
T ss_pred             ccccceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCC--------------------
Confidence            2222            3333        67899999999999999999999999753110                    


Q ss_pred             eEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEE
Q psy6113         129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILN  208 (406)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~  208 (406)
                                                           .++.+.+.++|++++++|+.|+++++++++|+|+++  |+||+
T Consensus       135 -------------------------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~  175 (297)
T 1d7o_A          135 -------------------------------------KPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG--GASIS  175 (297)
T ss_dssp             -------------------------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEE
T ss_pred             -------------------------------------CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccC--ceEEE
Confidence                                                 112378899999999999999999999999999763  89999


Q ss_pred             eCCCCCCCCCccCCc-hhhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHh------cC--CCcccccc
Q psy6113         209 ISPPLNLNPFWFKNH-VAYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEML------TG--GSADAKAT  278 (406)
Q Consensus       209 vsS~~~~~~~~~~~~-~~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~------~~--~~~~~~~~  278 (406)
                      +||..+..+  .+++ ..|++||+|+++|+++++.|+++ +|||||+|+||+ +.|++.+..      ..  ....+..+
T Consensus       176 isS~~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r  252 (297)
T 1d7o_A          176 LTYIASERI--IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP-LGSRAAKAIGFIDTMIEYSYNNAPIQK  252 (297)
T ss_dssp             EECGGGTSC--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC-CBCCCSSCCSHHHHHHHHHHHHSSSCC
T ss_pred             EeccccccC--CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccc-cccchhhhccccHHHHHHhhccCCCCC
Confidence            999988876  3566 68999999999999999999985 899999999996 555432110      00  00124456


Q ss_pred             cCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         279 SRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       279 ~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ..+|+|+|++++||+++.++++||+++ +|+|+.
T Consensus       253 ~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          253 TLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            789999999999999988899999999 777754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-35  Score=280.63  Aligned_cols=222  Identities=20%  Similarity=0.303  Sum_probs=189.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|+++++++
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~   98 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG-------LEETAAKCKGLGAKVHTFVVDCSNREDIYSS   98 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHH-------HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHH
Confidence            467899999999999999999999999999999999998653       3345566666678899999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|+||||||+....+..                                                     
T Consensus        99 ~~~~~~~~g~iD~li~~Ag~~~~~~~~-----------------------------------------------------  125 (272)
T 1yb1_A           99 AKKVKAEIGDVSILVNNAGVVYTSDLF-----------------------------------------------------  125 (272)
T ss_dssp             HHHHHHHTCCCSEEEECCCCCCCCCCG-----------------------------------------------------
T ss_pred             HHHHHHHCCCCcEEEECCCcCCCcchh-----------------------------------------------------
Confidence            999999999999999999986543322                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+.++++|+.+++.++++++|.|++++.++||++||..+..+  .++...|++||++++.++++++.|
T Consensus       126 ------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e  197 (272)
T 1yb1_A          126 ------ATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS--VPFLLAYCSSKFAAVGFHKTLTDE  197 (272)
T ss_dssp             ------GGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC--CCCchhHHHHHHHHHHHHHHHHHH
Confidence                  678899999999999999999999999999988899999999998876  467889999999999999999999


Q ss_pred             hc---CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCC
Q psy6113         244 FK---GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       244 ~~---~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~  298 (406)
                      ++   ++||+||+|+||+ +.|++.+    ....+..+..+|+|+|+.+++++.+...
T Consensus       198 ~~~~~~~gi~v~~v~Pg~-v~t~~~~----~~~~~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          198 LAALQITGVKTTCLCPNF-VNTGFIK----NPSTSLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             HHHTTCTTEEEEEEEETH-HHHCSTT----CTHHHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             HHHhCCCCeEEEEEeCCc-ccCCccc----cccccccCCCCHHHHHHHHHHHHHcCCC
Confidence            97   6799999999996 5664421    1122345678999999999999976443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=3.8e-36  Score=297.77  Aligned_cols=274  Identities=15%  Similarity=0.077  Sum_probs=199.1

Q ss_pred             cCCcEEEEecCCchHHHH--HHHHHHHcCCeEEEEecCCCCCCCCccc-----HHHHHHHHHHcCCeeeeeeecCCChHH
Q psy6113           7 LSGLTIFITGASRGIGKA--IALKAAKDGANIVIAAKTAEPHPKLPGT-----IYSAAKEVEDAGGNCLPCIVDIRDEHA   79 (406)
Q Consensus         7 l~gk~alVTGas~GIG~a--ia~~La~~Ga~Vvl~~r~~~~~~~~~~~-----i~~~~~~~~~~g~~~~~~~~Dl~~~~~   79 (406)
                      ..||++|||||++|||++  +|++|+++|++|++++|+.+......+.     .+...+.+...+.++.++.+|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            679999999999999999  9999999999999999987664432111     133444556678889999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      ++++++++.+.+|+||+||||||+.........  +.|.... ..+...+..                      ..+-..
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g--~~~~s~~-~p~~~~~~~----------------------~~~d~~  192 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTG--NVYTSRI-KTILGDFEG----------------------PTIDVE  192 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTC--CEEECCC-CBSSSCEEE----------------------EEEETT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccccccccccc--ccccccc-ccccccccc----------------------cccccc
Confidence            999999999999999999999998522110000  0000000 000000000                      000000


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHH-HHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCc--hhhhHhhHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTY-LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH--VAYTISKYGMSMC  236 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal~~l  236 (406)
                      ...+....+.+.+.++|+.++++|..+.| .+++++++.+...++|+||++||..+..+  .+.+  .+|++||+|+.+|
T Consensus       193 ~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~--~p~~~~~aY~ASKaAL~~l  270 (418)
T 4eue_A          193 RDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT--YKIYREGTIGIAKKDLEDK  270 (418)
T ss_dssp             TTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG--TTTTTTSHHHHHHHHHHHH
T ss_pred             ccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC--CCccccHHHHHHHHHHHHH
Confidence            01111223347899999999999999998 78888776554455699999999998876  3556  9999999999999


Q ss_pred             HHHHHHhhcC-CCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         237 ALGMAEEFKG-DNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       237 ~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      +++||.|+++ +|||||+|+||+ +.|++....+..+      ..+.++..+||++++.+.||+++  ...+|+.+ +|+
T Consensus       271 trsLA~ELa~~~GIrVN~V~PG~-v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~  347 (418)
T 4eue_A          271 AKLINEKLNRVIGGRAFVSVNKA-LVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDD  347 (418)
T ss_dssp             HHHHHHHHHHHHSCEEEEEECCC-CCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCT
T ss_pred             HHHHHHHhCCccCeEEEEEECCc-CcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCC
Confidence            9999999999 999999999996 6777666553211      12456778999999999999987  56788886 776


Q ss_pred             hH
Q psy6113         309 EV  310 (406)
Q Consensus       309 g~  310 (406)
                      |.
T Consensus       348 ~~  349 (418)
T 4eue_A          348 KG  349 (418)
T ss_dssp             TS
T ss_pred             Cc
Confidence            43

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=3.9e-36  Score=291.12  Aligned_cols=230  Identities=20%  Similarity=0.185  Sum_probs=182.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH---HcCCeeeeeeecCCChHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE---DAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~---~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+..++.    .+..+...   ..+.++.++.+|++|++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   76 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ----GRLWEAARALACPPGSLETLQLDVRDSKSVAAAR   76 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT----HHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHH----HHHHHHhhhccCCCCceEEEEecCCCHHHHHHHH
Confidence            479999999999999999999999999999998887654432    11112221   12467899999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++  .++++|+||||||+....+.                                                       
T Consensus        77 ~~~--~~g~iD~lVnnAG~~~~~~~-------------------------------------------------------   99 (327)
T 1jtv_A           77 ERV--TEGRVDVLVCNAGLGLLGPL-------------------------------------------------------   99 (327)
T ss_dssp             HTC--TTSCCSEEEECCCCCCCSCG-------------------------------------------------------
T ss_pred             HHH--hcCCCCEEEECCCcCCCCch-------------------------------------------------------
Confidence            988  35899999999997643332                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .++...|++||+++++|+++++.|+
T Consensus       100 ----~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~--~~~~~~Y~aSK~a~~~~~~~la~el  173 (327)
T 1jtv_A          100 ----EALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG--LPFNDVYCASKFALEGLCESLAVLL  173 (327)
T ss_dssp             ----GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC--CCCChHHHHHHHHHHHHHHHHHHHh
Confidence                2788999999999999999999999999999888899999999998876  4678899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC--------c--------------cccccc-CChhhHHHHHHHhhcC---CCC
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS--------A--------------DAKATS-RKPEIMADAAYYILSS---NPP  298 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~--------------~~~~~~-~~pe~vA~~v~~L~s~---~~~  298 (406)
                      +++||+||+|+||+ +.|++.+......        .              .+..+. .+|+|+|++++|++++   ..+
T Consensus       174 ~~~gI~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~  252 (327)
T 1jtv_A          174 LPFGVHLSLIECGP-VHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLR  252 (327)
T ss_dssp             GGGTEEEEEEEECC-BCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSE
T ss_pred             hhcCcEEEEEEeCc-ccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeE
Confidence            99999999999996 5666644322110        0              011223 4899999999999874   356


Q ss_pred             CccceEE
Q psy6113         299 SLTGQFL  305 (406)
Q Consensus       299 ~~tG~~i  305 (406)
                      |++|+.+
T Consensus       253 ~~tg~~~  259 (327)
T 1jtv_A          253 YFTTERF  259 (327)
T ss_dssp             EESCSTT
T ss_pred             EEeCchH
Confidence            8888765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-35  Score=272.10  Aligned_cols=222  Identities=22%  Similarity=0.251  Sum_probs=183.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .+                  ++.++.+|++|+++++++++++ 
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~------------------~~~~~~~D~~~~~~~~~~~~~~-   61 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE------------------DLIYVEGDVTREEDVRRAVARA-   61 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS------------------SSEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc------------------ceEEEeCCCCCHHHHHHHHHHH-
Confidence            689999999999999999999999999999999876 22                  2477899999999999999999 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.++++|++|||||+.......+.+                                                       
T Consensus        62 ~~~~~~d~li~~ag~~~~~~~~~~~-------------------------------------------------------   86 (242)
T 1uay_A           62 QEEAPLFAVVSAAGVGLAEKILGKE-------------------------------------------------------   86 (242)
T ss_dssp             HHHSCEEEEEECCCCCCCCCSBCSS-------------------------------------------------------
T ss_pred             HhhCCceEEEEcccccCcccccccc-------------------------------------------------------
Confidence            8899999999999987544332000                                                       


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---C---CeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---H---AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~---g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      .+.+.++|++++++|+.+++.++++++|.|++++   .   ++||++||..+..+  .++...|++||++++.++++++.
T Consensus        87 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~  164 (242)
T 1uay_A           87 GPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG--QIGQAAYAASKGGVVALTLPAAR  164 (242)
T ss_dssp             SBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--CCCCchhhHHHHHHHHHHHHHHH
Confidence            1234569999999999999999999999998865   3   49999999987765  36788999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC------Ccccc-cccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAK-ATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~-~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |++++||+||+|+||+ +.|++.......      ...+. .++.+|+|+|+++++|+++  .+++|+.+ +|+|+
T Consensus       165 e~~~~gi~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gG~  237 (242)
T 1uay_A          165 ELAGWGIRVVTVAPGL-FDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGAL  237 (242)
T ss_dssp             HHGGGTEEEEEEEECS-CSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             HHhhcCcEEEEEEecc-CcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--CCCCCcEEEEcCCe
Confidence            9999999999999996 566554322110      01233 5678999999999999987  78999988 77764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-35  Score=282.72  Aligned_cols=254  Identities=20%  Similarity=0.254  Sum_probs=185.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-CeeeeeeecCCCh-HHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-GNCLPCIVDIRDE-HAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~Dl~~~-~~v~   81 (406)
                      +..+++|++|||||++|||+++|++|+++|++|++++|+.++       .++..+++...+ .++.++.+|++++ ++++
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~   79 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTK-------GHEAVEKLKNSNHENVVFHQLDVTDPIATMS   79 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTCCSEEEEECCTTSCHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhcCCCceEEEEccCCCcHHHHH
Confidence            346789999999999999999999999999999999998764       334556666554 4789999999998 9999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++.+.+.++++|+||||||+.......    ..+                      ...+......   .+-++..-.
T Consensus        80 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~----~~~----------------------~~~~~~~~~~---~~~~~~~~~  130 (311)
T 3o26_A           80 SLADFIKTHFGKLDILVNNAGVAGFSVDA----DRF----------------------KAMISDIGED---SEELVKIYE  130 (311)
T ss_dssp             HHHHHHHHHHSSCCEEEECCCCCSCEECH----HHH----------------------HHHHHHHCSS---TTHHHHHTT
T ss_pred             HHHHHHHHhCCCCCEEEECCccccccccc----chh----------------------hhcccccccc---hhhcchhhc
Confidence            99999999999999999999987532110    000                      0000000000   000000000


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------------------
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------------------  218 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------------------  218 (406)
                      .....++.+.+.++|++++++|+.|+++++++++|+|++++.++||++||..+..+.                       
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (311)
T 3o26_A          131 KPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDM  210 (311)
T ss_dssp             SHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHH
T ss_pred             ccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHH
Confidence            001112337789999999999999999999999999999888999999998876542                       


Q ss_pred             ------------------ccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccC
Q psy6113         219 ------------------WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR  280 (406)
Q Consensus       219 ------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~  280 (406)
                                        +.++...|++||+|+++|+++++.|+.+  |+||+|+||+ +.|++...         ....
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~-v~T~~~~~---------~~~~  278 (311)
T 3o26_A          211 VVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGL-VKTEMNYG---------IGNY  278 (311)
T ss_dssp             HHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCS-BCSGGGTT---------CCSB
T ss_pred             HHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCc-eecCCcCC---------CCCC
Confidence                              0135678999999999999999999964  9999999996 56644321         1235


Q ss_pred             ChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         281 KPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       281 ~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      +|++.|+.+++++.......+|.++
T Consensus       279 ~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          279 TAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             CHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             CHHHHHHHHHHHHhCCCCCCCceEe
Confidence            7999999999998765555666665

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-35  Score=276.82  Aligned_cols=228  Identities=19%  Similarity=0.193  Sum_probs=191.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcC---CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDG---ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~G---a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .++++|+++||||++|||+++|++|+++|   ++|++++|+.++.+        ...++...+.++.++.+|+++.++++
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~--------~~~~l~~~~~~~~~~~~Dl~~~~~v~   88 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK--------ELEDLAKNHSNIHILEIDLRNFDAYD   88 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH--------HHHHHHHHCTTEEEEECCTTCGGGHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH--------HHHHhhccCCceEEEEecCCChHHHH
Confidence            46889999999999999999999999999   99999999877532        23344444678999999999999999


Q ss_pred             HHHHHHHHhcC--CccEEEecccccc-cCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          82 SAVNAAVDKFG--GIDILVNNASAIS-LTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        82 ~~~~~i~~~~g--~iD~linnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      ++++++.+.++  ++|+||||||+.. ..+.                                                 
T Consensus        89 ~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~-------------------------------------------------  119 (267)
T 1sny_A           89 KLVADIEGVTKDQGLNVLFNNAGIAPKSARI-------------------------------------------------  119 (267)
T ss_dssp             HHHHHHHHHHGGGCCSEEEECCCCCCCCCCG-------------------------------------------------
T ss_pred             HHHHHHHHhcCCCCccEEEECCCcCCCcccc-------------------------------------------------
Confidence            99999999998  8999999999865 2222                                                 


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------C-----CCeEEEeCCCCCCCCCc-cCCchhh
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------N-----HAHILNISPPLNLNPFW-FKNHVAY  226 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~-----~g~Iv~vsS~~~~~~~~-~~~~~~Y  226 (406)
                                .+.+.++|+.++++|+.+++.++++++|.|+++      +     .++||++||..+..+.. .++...|
T Consensus       120 ----------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y  189 (267)
T 1sny_A          120 ----------TAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAY  189 (267)
T ss_dssp             ----------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHH
T ss_pred             ----------ccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCchHH
Confidence                      277889999999999999999999999999887      3     58999999998876531 1367889


Q ss_pred             hHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         227 TISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       227 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      ++||++++.|+++++.|++++||+||+|+||+ +.|++..         .....+|+++|+.+++++++....++|+++ 
T Consensus       190 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~-v~t~~~~---------~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~  259 (267)
T 1sny_A          190 RTSKSALNAATKSLSVDLYPQRIMCVSLHPGW-VKTDMGG---------SSAPLDVPTSTGQIVQTISKLGEKQNGGFVN  259 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEECCCS-BCSTTTC---------TTCSBCHHHHHHHHHHHHHHCCGGGTTCEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcc-eecCCCC---------CCCCCCHHHHHHHHHHHHHhcCcCCCCcEEc
Confidence            99999999999999999999999999999996 5664321         124578999999999999988889999998 


Q ss_pred             Eehh
Q psy6113         306 IDDE  309 (406)
Q Consensus       306 ~d~g  309 (406)
                      +|++
T Consensus       260 ~~g~  263 (267)
T 1sny_A          260 YDGT  263 (267)
T ss_dssp             TTSC
T ss_pred             cCCc
Confidence            5554

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=6.3e-36  Score=279.21  Aligned_cols=213  Identities=19%  Similarity=0.174  Sum_probs=169.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||+++|++|+++|++|++++|+.++.+.                    .+.+|++++++++++++++  
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------------~~~~Dl~~~~~v~~~~~~~--   59 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------------DLSTAEGRKQAIADVLAKC--   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------------CTTSHHHHHHHHHHHHTTC--
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------------ccccCCCCHHHHHHHHHHh--
Confidence            689999999999999999999999999999998765321                    1678999999988887632  


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                       ++++|+||||||+...                                                               
T Consensus        60 -~~~id~lv~~Ag~~~~---------------------------------------------------------------   75 (257)
T 1fjh_A           60 -SKGMDGLVLCAGLGPQ---------------------------------------------------------------   75 (257)
T ss_dssp             -TTCCSEEEECCCCCTT---------------------------------------------------------------
T ss_pred             -CCCCCEEEECCCCCCC---------------------------------------------------------------
Confidence             3899999999996421                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC--------------------------CccCCc
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP--------------------------FWFKNH  223 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~--------------------------~~~~~~  223 (406)
                         .+.|+.++++|+.+++.++++++|+|++++.++||++||..+...                          .+.++.
T Consensus        76 ---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           76 ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             ---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             ---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence               122889999999999999999999999988899999999988721                          113467


Q ss_pred             hhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHh-cCCC--------cccccccCChhhHHHHHHHhhc
Q psy6113         224 VAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEML-TGGS--------ADAKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       224 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~-~~~~--------~~~~~~~~~pe~vA~~v~~L~s  294 (406)
                      ..|++||++++.++++++.|++++||+||+|+||+ +.|++.+.. ....        ..+..++.+|+|+|++++||++
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~  231 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGA-TETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMS  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHHHHHTS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCC-CCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999996 666665433 1110        1234467899999999999999


Q ss_pred             CCCCCccceEE-EehhHHH
Q psy6113         295 SNPPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       295 ~~~~~~tG~~i-~d~g~~~  312 (406)
                      +.+.++||+++ +|+|...
T Consensus       232 ~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          232 PAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             GGGTTCCSCEEEESTTHHH
T ss_pred             chhcCCcCCEEEECCCccc
Confidence            88889999999 7877653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.5e-36  Score=278.71  Aligned_cols=216  Identities=17%  Similarity=0.208  Sum_probs=154.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+||++|||||++|||+++|++|++ |++|++++|+.++           .+.+.. ..++.++.+|+++.++ .+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~-----------~~~~~~-~~~~~~~~~D~~~~~~-~~~~   66 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEH-----------LAALAE-IEGVEPIESDIVKEVL-EEGG   66 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHH-----------HHHHHT-STTEEEEECCHHHHHH-TSSS
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHH-----------HHHHHh-hcCCcceecccchHHH-HHHH
Confidence            468899999999999999999999998 9999999997643           222222 3458889999998877 5555


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .+..+.++++|+||||||+....+.                                                       
T Consensus        67 ~~~~~~~~~id~lv~~Ag~~~~~~~-------------------------------------------------------   91 (245)
T 3e9n_A           67 VDKLKNLDHVDTLVHAAAVARDTTI-------------------------------------------------------   91 (245)
T ss_dssp             CGGGTTCSCCSEEEECC---------------------------------------------------------------
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCch-------------------------------------------------------
Confidence            5556678889999999997654333                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+.+.++|++++++|+.+++.++++++|.|++++ |+||++||..+..+  .++...|++||+|+++|+++++.|+
T Consensus        92 ----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~  164 (245)
T 3e9n_A           92 ----EAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP--HPGNTIYAASKHALRGLADAFRKEE  164 (245)
T ss_dssp             ------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC--CCCchHHHHHHHHHHHHHHHHHHHh
Confidence                3788999999999999999999999999998876 99999999999877  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC--cccccccCChhhHHHHHHHhhcCCC
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS--ADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~--~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +++||+||+|+||+ +.|++.+......  ..+..++.+|+|+|++++||++...
T Consensus       165 ~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          165 ANNGIRVSTVSPGP-TNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             GGGTCEEEEEEECC-C----------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             hhcCeEEEEEecCC-ccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence            99999999999996 6776655443221  1234567899999999999998644

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=9.5e-35  Score=273.07  Aligned_cols=223  Identities=23%  Similarity=0.330  Sum_probs=184.5

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHH-cCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAK-DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~-~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .++|+++||||++|||+++|++|++ +|++|++++|+.++       ..+..+++...+.++.++.+|+++.++++++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   74 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR-------GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD   74 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH-------HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHH-------HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence            4689999999999999999999999 99999999998653       334556666667788999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.++++|+||||||+......                                                        
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~~~~--------------------------------------------------------   98 (276)
T 1wma_A           75 FLRKEYGGLDVLVNNAGIAFKVAD--------------------------------------------------------   98 (276)
T ss_dssp             HHHHHHSSEEEEEECCCCCCCTTC--------------------------------------------------------
T ss_pred             HHHHhcCCCCEEEECCcccccCCC--------------------------------------------------------
Confidence            999999999999999997643211                                                        


Q ss_pred             CCCCCCc-hhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------------------
Q psy6113         166 TDTANTP-LKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------------------  218 (406)
Q Consensus       166 ~~~~~~~-~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------------------  218 (406)
                          ..+ .++|+.++++|+.++++++++++|+|++.  ++||++||..+..+.                          
T Consensus        99 ----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  172 (276)
T 1wma_A           99 ----PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMN  172 (276)
T ss_dssp             ----CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHH
T ss_pred             ----ccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--CEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhh
Confidence                233 57899999999999999999999999763  799999997654210                          


Q ss_pred             --------------ccCCchhhhHhhHHHHHHHHHHHHhhcC----CCeEEEEecchhhhhHHHHHHhcCCCcccccccC
Q psy6113         219 --------------WFKNHVAYTISKYGMSMCALGMAEEFKG----DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR  280 (406)
Q Consensus       219 --------------~~~~~~~Y~asKaal~~l~~~la~e~~~----~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~  280 (406)
                                    .++ ...|++||++++.|++.++.++++    +||+||+|+||+ +.|++.+         ..+..
T Consensus       173 ~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~-v~t~~~~---------~~~~~  241 (276)
T 1wma_A          173 KFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGW-VRTDMAG---------PKATK  241 (276)
T ss_dssp             HHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCS-BCSTTTC---------TTCSB
T ss_pred             hhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCc-cccCcCC---------ccccC
Confidence                          012 378999999999999999999987    799999999996 5554321         13467


Q ss_pred             ChhhHHHHHHHhhcCC--CCCccceEEEehh
Q psy6113         281 KPEIMADAAYYILSSN--PPSLTGQFLIDDE  309 (406)
Q Consensus       281 ~pe~vA~~v~~L~s~~--~~~~tG~~i~d~g  309 (406)
                      +|+|+|+.++||++.+  ..++||+++.+++
T Consensus       242 ~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~  272 (276)
T 1wma_A          242 SPEEGAETPVYLALLPPDAEGPHGQFVSEKR  272 (276)
T ss_dssp             CHHHHTHHHHHHHSCCTTCCCCCSCEEETTE
T ss_pred             ChhHhhhhHhhhhcCcccccccCceEeccCc
Confidence            8999999999999854  4689999987553

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.3e-33  Score=268.13  Aligned_cols=218  Identities=22%  Similarity=0.263  Sum_probs=182.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC-eeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG-NCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+. ++.++.+|++|.++++++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~   96 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKET-------LQKVVSHCLELGAASAHYIAGTMEDMTFAEQF   96 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHTCSEEEEEECCTTCHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHHhCCCceEEEeCCCCCHHHHHHH
Confidence            45889999999999999999999999999999999998654       3344555555554 789999999999999999


Q ss_pred             HHHHHHhcCCccEEEec-ccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNN-ASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        84 ~~~i~~~~g~iD~linn-AG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ++++.+.+|++|+|||| ||+... ...                                                    
T Consensus        97 ~~~~~~~~g~iD~li~naag~~~~-~~~----------------------------------------------------  123 (286)
T 1xu9_A           97 VAQAGKLMGGLDMLILNHITNTSL-NLF----------------------------------------------------  123 (286)
T ss_dssp             HHHHHHHHTSCSEEEECCCCCCCC-CCC----------------------------------------------------
T ss_pred             HHHHHHHcCCCCEEEECCccCCCC-ccc----------------------------------------------------
Confidence            99999999999999999 565422 222                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|+.++++|+.|++.++++++|+|++++ |+||++||..+..+  .++...|++||+++++++++++.
T Consensus       124 -------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~  193 (286)
T 1xu9_A          124 -------HDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVA--YPMVAAYSASKFALDGFFSSIRK  193 (286)
T ss_dssp             -------CSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-CEEEEECCcccccC--CCCccHHHHHHHHHHHHHHHHHH
Confidence                   568899999999999999999999999998764 89999999998876  47889999999999999999999


Q ss_pred             hh--cCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcC
Q psy6113         243 EF--KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       243 e~--~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      |+  ...||+|++|+||+ +.|++.......  .......+|+++|+.++..+..
T Consensus       194 e~~~~~~~i~v~~v~Pg~-v~t~~~~~~~~~--~~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          194 EYSVSRVNVSITLCVLGL-IDTETAMKAVSG--IVHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHTCCCEEEEEEECC-BCCHHHHHHSCG--GGGGGCBCHHHHHHHHHHHHHT
T ss_pred             HHhhcCCCeEEEEeecCc-cCChhHHHhccc--cccCCCCCHHHHHHHHHHHHhc
Confidence            99  67899999999996 667665432221  1223467899999999998864

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.2e-34  Score=307.88  Aligned_cols=236  Identities=14%  Similarity=0.111  Sum_probs=190.7

Q ss_pred             CcccCCcEEEEecCCch-HHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHH----HcCCeeeeeeecCCCh
Q psy6113           4 TGKLSGLTIFITGASRG-IGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVE----DAGGNCLPCIVDIRDE   77 (406)
Q Consensus         4 ~~~l~gk~alVTGas~G-IG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~----~~g~~~~~~~~Dl~~~   77 (406)
                      .++|+||++|||||++| ||+++|++|+++|++|+++ +|+.+++.+       ..+++.    ..+.++.++.+|++|.
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee-------~a~eL~ael~a~Ga~V~vV~~DVTD~  543 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTD-------YYQSIYAKYGAKGSTLIVVPFNQGSK  543 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTT-------HHHHTTTTTCCTTCEEEEEECCSSST
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHH-------HHHHHHHHhhcCCCeEEEEEeCCCCH
Confidence            45789999999999998 9999999999999999998 566655443       233332    2266899999999999


Q ss_pred             HHHHHHHHHHHHh-----cC-CccEEEecccccccC-CCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhc
Q psy6113          78 HAVQSAVNAAVDK-----FG-GIDILVNNASAISLT-DTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKF  150 (406)
Q Consensus        78 ~~v~~~~~~i~~~-----~g-~iD~linnAG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (406)
                      ++++++++++.+.     +| +||+||||||+.... ++                                         
T Consensus       544 esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l-----------------------------------------  582 (1688)
T 2pff_A          544 QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIEL-----------------------------------------  582 (1688)
T ss_dssp             THHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCS-----------------------------------------
T ss_pred             HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCCh-----------------------------------------
Confidence            9999999999998     77 999999999986543 32                                         


Q ss_pred             CCcceEeccccccccCCCCCCc--hhhHHHHHhhhhhHHHHHHHhh--hHHhHhcCCCeEEEeCCCCCCCCCccCCchhh
Q psy6113         151 GGIDILVNNASAISLTDTANTP--LKKYDLMNQINARGTYLVSQKC--LPYLKKSNHAHILNISPPLNLNPFWFKNHVAY  226 (406)
Q Consensus       151 g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y  226 (406)
                                        .+.+  .++|++++++|+.+++.+++++  +|.|++++.|+||++||..+..+    +...|
T Consensus       583 ------------------~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G----g~saY  640 (1688)
T 2pff_A          583 ------------------EHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG----GDGMY  640 (1688)
T ss_dssp             ------------------SSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS----CBTTH
T ss_pred             ------------------hhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC----CchHH
Confidence                              2666  8999999999999999999998  89998887799999999988765    56789


Q ss_pred             hHhhHHHHHH-HHHHHHhhcCCCeEEEEecchhhhhHHHHHHhc---CCCcccccccCChhhHHHHHHHhhcCC-CCCcc
Q psy6113         227 TISKYGMSMC-ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLT---GGSADAKATSRKPEIMADAAYYILSSN-PPSLT  301 (406)
Q Consensus       227 ~asKaal~~l-~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~---~~~~~~~~~~~~pe~vA~~v~~L~s~~-~~~~t  301 (406)
                      ++||+|+.+| ++.++.+++++ |+||+|+||++.+|++.....   ........+..+|+|+|++++||+++. +.++|
T Consensus       641 aASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPEEVA~aIlFLaSd~sAs~IT  719 (1688)
T 2pff_A          641 SESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLTPEVVELCQ  719 (1688)
T ss_dssp             HHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCCTTHHHHHHHTSTTHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHHHHHHHHHHHhCCCcccccc
Confidence            9999999999 89999999887 999999999754354422100   000011124569999999999999987 68999


Q ss_pred             ceEE-Ee--hhH
Q psy6113         302 GQFL-ID--DEV  310 (406)
Q Consensus       302 G~~i-~d--~g~  310 (406)
                      |+.+ +|  ||+
T Consensus       720 Gq~I~VDVDGG~  731 (1688)
T 2pff_A          720 KSPVMADLNGGL  731 (1688)
T ss_dssp             TSCCCCCCSCSG
T ss_pred             CcEEEEEcCCCe
Confidence            9988 44  664

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.98  E-value=6.7e-33  Score=310.16  Aligned_cols=235  Identities=14%  Similarity=0.111  Sum_probs=188.0

Q ss_pred             CcccCCcEEEEecCCch-HHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHH----HcCCeeeeeeecCCCh
Q psy6113           4 TGKLSGLTIFITGASRG-IGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVE----DAGGNCLPCIVDIRDE   77 (406)
Q Consensus         4 ~~~l~gk~alVTGas~G-IG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~----~~g~~~~~~~~Dl~~~   77 (406)
                      .++|+||++|||||++| ||+++|++|+++|++|+++ +|+.++       ..+..+++.    ..+.++.++.+|++|.
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~-------l~~~~~eL~~~~~~~g~~v~~v~~DVsd~  742 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQ-------VTDYYQSIYAKYGAKGSTLIVVPFNQGSK  742 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHH-------HHHHHHHHHHHHCCTTCEEEEEECCTTCH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHH-------HHHHHHHHHHHhhcCCCeEEEEEecCCCH
Confidence            45789999999999998 9999999999999999998 455443       223333332    2367899999999999


Q ss_pred             HHHHHHHHHHHHh-----cC-CccEEEecccccccC-CCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhc
Q psy6113          78 HAVQSAVNAAVDK-----FG-GIDILVNNASAISLT-DTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKF  150 (406)
Q Consensus        78 ~~v~~~~~~i~~~-----~g-~iD~linnAG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (406)
                      ++++++++++.+.     +| +||+||||||+.... ++                                         
T Consensus       743 ~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l-----------------------------------------  781 (1887)
T 2uv8_A          743 QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIEL-----------------------------------------  781 (1887)
T ss_dssp             HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCG-----------------------------------------
T ss_pred             HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCCh-----------------------------------------
Confidence            9999999999998     66 999999999986543 22                                         


Q ss_pred             CCcceEeccccccccCCCCCCc--hhhHHHHHhhhhhHHHHHHHhh--hHHhHhcCCCeEEEeCCCCCCCCCccCCchhh
Q psy6113         151 GGIDILVNNASAISLTDTANTP--LKKYDLMNQINARGTYLVSQKC--LPYLKKSNHAHILNISPPLNLNPFWFKNHVAY  226 (406)
Q Consensus       151 g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y  226 (406)
                                        .+.+  .++|++++++|+.+++.+++.+  +|.|++++.|+||++||..+..+    ++..|
T Consensus       782 ------------------~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g----g~~aY  839 (1887)
T 2uv8_A          782 ------------------EHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG----GDGMY  839 (1887)
T ss_dssp             ------------------GGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS----CBTTH
T ss_pred             ------------------hhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC----CCchH
Confidence                              2666  8999999999999999999988  89998887799999999988765    56789


Q ss_pred             hHhhHHHHHH-HHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcc----cccccCChhhHHHHHHHhhcCC-CCCc
Q psy6113         227 TISKYGMSMC-ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSAD----AKATSRKPEIMADAAYYILSSN-PPSL  300 (406)
Q Consensus       227 ~asKaal~~l-~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~----~~~~~~~pe~vA~~v~~L~s~~-~~~~  300 (406)
                      ++||+|+.+| ++.++.+++++ |+||+|+||++.+|++.... .....    ...+..+|+|+|+.++||+++. +.++
T Consensus       840 aASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~-~~~~~~~~~~plr~~sPEEVA~avlfLaSd~~as~i  917 (1887)
T 2uv8_A          840 SESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN-NIIAEGIEKMGVRTFSQKEMAFNLLGLLTPEVVELC  917 (1887)
T ss_dssp             HHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C-CTTHHHHHTTSCCCEEHHHHHHHHHGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc-hhHHHHHHhcCCCCCCHHHHHHHHHHHhCCCccccc
Confidence            9999999999 99999999988 99999999975436554321 10000    0114558999999999999987 6799


Q ss_pred             cceEE-Ee--hhH
Q psy6113         301 TGQFL-ID--DEV  310 (406)
Q Consensus       301 tG~~i-~d--~g~  310 (406)
                      ||+.+ +|  ||+
T Consensus       918 TGq~I~VDVDGG~  930 (1887)
T 2uv8_A          918 QKSPVMADLNGGL  930 (1887)
T ss_dssp             HHSCEEEEESCST
T ss_pred             cCcEEEEECCCCe
Confidence            99988 44  663

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=6.7e-31  Score=236.24  Aligned_cols=197  Identities=14%  Similarity=0.144  Sum_probs=165.5

Q ss_pred             Cc-EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GL-TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk-~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +| +++||||++|||++++++|+ +|++|++++|+.+                        ++.+|++++++++++++++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------~~~~D~~~~~~~~~~~~~~   56 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------DVTVDITNIDSIKKMYEQV   56 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------SEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------ceeeecCCHHHHHHHHHHh
Confidence            44 69999999999999999999 9999999999753                        4679999999999988764


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                          +++|+||||||.....+.                                                          
T Consensus        57 ----~~~d~vi~~ag~~~~~~~----------------------------------------------------------   74 (202)
T 3d7l_A           57 ----GKVDAIVSATGSATFSPL----------------------------------------------------------   74 (202)
T ss_dssp             ----CCEEEEEECCCCCCCCCG----------------------------------------------------------
T ss_pred             ----CCCCEEEECCCCCCCCCh----------------------------------------------------------
Confidence                899999999997643332                                                          


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                       .+.+.++|++.+++|+.+++.+++++.|.|++.  ++||++||..+..+  .++...|++||++++.++++++.|+ ++
T Consensus        75 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~--~~~~~~Y~~sK~~~~~~~~~~~~e~-~~  148 (202)
T 3d7l_A           75 -TELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDP--IVQGASAAMANGAVTAFAKSAAIEM-PR  148 (202)
T ss_dssp             -GGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHTTSC-ST
T ss_pred             -hhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCC--CCccHHHHHHHHHHHHHHHHHHHHc-cC
Confidence             277889999999999999999999999999653  89999999988766  4778899999999999999999999 88


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ||++|+|+||+ +.|++......   .+..++.+|+|+|++++++++   .+++|+.+
T Consensus       149 gi~v~~v~pg~-v~~~~~~~~~~---~~~~~~~~~~dva~~~~~~~~---~~~~G~~~  199 (202)
T 3d7l_A          149 GIRINTVSPNV-LEESWDKLEPF---FEGFLPVPAAKVARAFEKSVF---GAQTGESY  199 (202)
T ss_dssp             TCEEEEEEECC-BGGGHHHHGGG---STTCCCBCHHHHHHHHHHHHH---SCCCSCEE
T ss_pred             CeEEEEEecCc-cCCchhhhhhh---ccccCCCCHHHHHHHHHHhhh---ccccCceE
Confidence            99999999996 55655432111   223456799999999998883   46889876

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=3.4e-32  Score=303.85  Aligned_cols=235  Identities=14%  Similarity=0.092  Sum_probs=185.3

Q ss_pred             cccCCcEEEEecCCch-HHHHHHHHHHHcCCeEEEEe-cCCCCCCCCcccHHHHHHHH----HHcCCeeeeeeecCCChH
Q psy6113           5 GKLSGLTIFITGASRG-IGKAIALKAAKDGANIVIAA-KTAEPHPKLPGTIYSAAKEV----EDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         5 ~~l~gk~alVTGas~G-IG~aia~~La~~Ga~Vvl~~-r~~~~~~~~~~~i~~~~~~~----~~~g~~~~~~~~Dl~~~~   78 (406)
                      ++|+||++|||||++| ||+++|++|+++|++|++++ |+.+.       ..+..+++    ...+.++.++.||++|.+
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~-------l~~~a~eL~~el~~~G~~v~~v~~DVsd~e  720 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQ-------VTEYYQGIYARCGARGSQLVVVPFNQGSKQ  720 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHH-------HHHHHHHHHHHHCCTTCEEEEEECCTTCHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHH-------HHHHHHHHHHHhhccCCeEEEEEcCCCCHH
Confidence            4689999999999999 99999999999999999996 44332       22223333    223678999999999999


Q ss_pred             HHHHHHHHHHHh---cC-CccEEEecccccccC-CCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCc
Q psy6113          79 AVQSAVNAAVDK---FG-GIDILVNNASAISLT-DTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGI  153 (406)
Q Consensus        79 ~v~~~~~~i~~~---~g-~iD~linnAG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  153 (406)
                      +++++++++.+.   +| +||+||||||+.... ++                                            
T Consensus       721 sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l--------------------------------------------  756 (1878)
T 2uv9_A          721 DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREI--------------------------------------------  756 (1878)
T ss_dssp             HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCT--------------------------------------------
T ss_pred             HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCCh--------------------------------------------
Confidence            999999999998   99 999999999986543 32                                            


Q ss_pred             ceEeccccccccCCCCCCc--hhhHHHHHhhhhhHHHHHHHh--hhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHh
Q psy6113         154 DILVNNASAISLTDTANTP--LKKYDLMNQINARGTYLVSQK--CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTIS  229 (406)
Q Consensus       154 d~li~~ag~~~~~~~~~~~--~~~~~~~~~vN~~g~~~l~~~--~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as  229 (406)
                                     .+.+  .++|++++++|+.+++.+++.  ++|.|.+++.|+||++||..+..+    ++..|++|
T Consensus       757 ---------------~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g----g~~aYaAS  817 (1878)
T 2uv9_A          757 ---------------DSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG----NDGLYSES  817 (1878)
T ss_dssp             ---------------TCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS----CCSSHHHH
T ss_pred             ---------------hhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC----CchHHHHH
Confidence                           2777  899999999999999999987  789998877789999999988765    46789999


Q ss_pred             hHHHHHHHHHHH-HhhcCCCeEEEEecchhhhhHHHHHHh---cCCCcccccccCChhhHHHHHHHhhcCCC-CCccceE
Q psy6113         230 KYGMSMCALGMA-EEFKGDNIAVNALWPRTAIYTAAIEML---TGGSADAKATSRKPEIMADAAYYILSSNP-PSLTGQF  304 (406)
Q Consensus       230 Kaal~~l~~~la-~e~~~~gI~vn~v~PG~~~~t~~~~~~---~~~~~~~~~~~~~pe~vA~~v~~L~s~~~-~~~tG~~  304 (406)
                      |+|+.+|++.++ .+++++ |+||+|+||++..|++....   .........+..+|+|+|++++||+++.+ +++||+.
T Consensus       818 KAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLaSd~a~s~iTGq~  896 (1878)
T 2uv9_A          818 KLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLMAPAIVNLCQSDP  896 (1878)
T ss_dssp             HHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHHSHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHhCCcccccccCcE
Confidence            999999988765 458777 99999999974315432110   00000011145599999999999999876 7999998


Q ss_pred             E-E--ehhH
Q psy6113         305 L-I--DDEV  310 (406)
Q Consensus       305 i-~--d~g~  310 (406)
                      + +  |||+
T Consensus       897 I~VDVDGG~  905 (1878)
T 2uv9_A          897 VFADLNGGL  905 (1878)
T ss_dssp             EEEEESCSG
T ss_pred             EEEEcCCCc
Confidence            8 4  3664

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=2.2e-30  Score=240.58  Aligned_cols=213  Identities=19%  Similarity=0.219  Sum_probs=173.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++|++|++++|+.++.+.                    .+.+|++++++++++++++  
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------------~~~~D~~~~~~~~~~~~~~--   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------------DLSTPGGRETAVAAVLDRC--   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------------CTTSHHHHHHHHHHHHHHH--
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------------cccCCcccHHHHHHHHHHc--
Confidence            689999999999999999999999999999998764221                    1678999999998888754  


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                       .+++|+||||||....                                                               
T Consensus        60 -~~~~d~vi~~Ag~~~~---------------------------------------------------------------   75 (255)
T 2dkn_A           60 -GGVLDGLVCCAGVGVT---------------------------------------------------------------   75 (255)
T ss_dssp             -TTCCSEEEECCCCCTT---------------------------------------------------------------
T ss_pred             -CCCccEEEECCCCCCc---------------------------------------------------------------
Confidence             4789999999996421                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc------------------------cCCchh
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW------------------------FKNHVA  225 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~------------------------~~~~~~  225 (406)
                         .++|+..+++|+.+++.++++++|.|++++.++||++||..+..+..                        .++...
T Consensus        76 ---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T 2dkn_A           76 ---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA  152 (255)
T ss_dssp             ---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHH
T ss_pred             ---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchh
Confidence               12378899999999999999999999988789999999988775420                        035678


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHh-cCCCc-c-------cccccCChhhHHHHHHHhhcCC
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEML-TGGSA-D-------AKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~-~~~~~-~-------~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      |++||++++.+++.++.+++++||++|+|+||+ +.+++.... ..... .       +..++.+|+|+|+++++++++.
T Consensus       153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  231 (255)
T 2dkn_A          153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGA-VETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQ  231 (255)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-BCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCc-ccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999996 555554433 22110 0       3345789999999999999987


Q ss_pred             CCCccceEE-EehhHHH
Q psy6113         297 PPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       297 ~~~~tG~~i-~d~g~~~  312 (406)
                      +.+++|+++ +++|...
T Consensus       232 ~~~~~G~~~~v~gg~~~  248 (255)
T 2dkn_A          232 ASFIHGSVLFVDGGMDA  248 (255)
T ss_dssp             GTTCCSCEEEESTTHHH
T ss_pred             cccceeeEEEecCCeEe
Confidence            778999988 7777543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1.5e-30  Score=234.66  Aligned_cols=201  Identities=16%  Similarity=0.188  Sum_probs=160.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||++|||++++++|+++  +|++++|+.++       +.+..+++   +.  .++.+|++|++++++++++   
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~-------~~~~~~~~---~~--~~~~~D~~~~~~~~~~~~~---   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGA-------LAELAREV---GA--RALPADLADELEAKALLEE---   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHH-------HHHHHHHH---TC--EECCCCTTSHHHHHHHHHH---
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHH-------HHHHHHhc---cC--cEEEeeCCCHHHHHHHHHh---
Confidence            58999999999999999999999  99999997643       22222222   22  7888999999999999887   


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                       ++++|+||||||.....+..                                                           
T Consensus        64 -~~~id~vi~~ag~~~~~~~~-----------------------------------------------------------   83 (207)
T 2yut_A           64 -AGPLDLLVHAVGKAGRASVR-----------------------------------------------------------   83 (207)
T ss_dssp             -HCSEEEEEECCCCCCCBCSC-----------------------------------------------------------
T ss_pred             -cCCCCEEEECCCcCCCCChh-----------------------------------------------------------
Confidence             78999999999976543332                                                           


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|++++++|+.+++.+++++    ++++.++||++||..+..+  .++...|++||++++.++++++.|++++||
T Consensus        84 ~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi  157 (207)
T 2yut_A           84 EAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQ--VPGFAAYAAAKGALEAYLEAARKELLREGV  157 (207)
T ss_dssp             C---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHS--STTBHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccC--CCCcchHHHHHHHHHHHHHHHHHHHhhhCC
Confidence            7788899999999999999999998    4445689999999987765  467889999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCC
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~  298 (406)
                      ++|+|+||+ +.|++...    ...+..++.+|+|+|++++++++++..
T Consensus       158 ~v~~v~pg~-v~t~~~~~----~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          158 HLVLVRLPA-VATGLWAP----LGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             EEEEECCCC-BCSGGGGG----GTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             EEEEEecCc-ccCCCccc----cCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            999999996 45543211    112345678999999999999976443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=3.9e-30  Score=263.41  Aligned_cols=224  Identities=12%  Similarity=0.076  Sum_probs=176.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCe-EEEE-ecCCCCCCC------CcccHHHHHHHHHHcCCeeeeeeecCCChHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIA-AKTAEPHPK------LPGTIYSAAKEVEDAGGNCLPCIVDIRDEHA   79 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~-~r~~~~~~~------~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~   79 (406)
                      +++++|||||++|||+++|++|+++|++ |+++ +|+.....+      ....+++..+++...|.++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5899999999999999999999999997 7777 888533000      0012345677788889999999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      ++++++++. .+++||+||||||+.......                                                 
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~-------------------------------------------------  359 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDSEPLA-------------------------------------------------  359 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCCCCTT-------------------------------------------------
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCCCchh-------------------------------------------------
Confidence            999999998 789999999999987654433                                                 


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                                +.+.++|+.++++|+.|++++.+.+.|.|++++ .++||++||.++..+  .+++..|++||+++++|  
T Consensus       360 ----------~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g--~~g~~~YaaaKa~l~~l--  425 (525)
T 3qp9_A          360 ----------ATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG--GAGQGAYAAGTAFLDAL--  425 (525)
T ss_dssp             ----------TCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC--CTTCHHHHHHHHHHHHH--
T ss_pred             ----------hCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC--CCCCHHHHHHHHHHHHH--
Confidence                      889999999999999999999999999998876 799999999999987  48899999999999887  


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhc--CCCcccccccCChhhHHHHHHHhhcCCCC
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLT--GGSADAKATSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~--~~~~~~~~~~~~pe~vA~~v~~L~s~~~~  298 (406)
                        +.+++++||++|+|+||++ .|.|.....  ...........+|+++++.+.++++....
T Consensus       426 --A~~~~~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~~  484 (525)
T 3qp9_A          426 --AGQHRADGPTVTSVAWSPW-EGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHGDT  484 (525)
T ss_dssp             --HTSCCSSCCEEEEEEECCB-TTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHTCS
T ss_pred             --HHHHHhCCCCEEEEECCcc-ccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCCCC
Confidence              4567788999999999964 665431100  00001112346899999999999976443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=2.8e-29  Score=293.44  Aligned_cols=245  Identities=12%  Similarity=0.097  Sum_probs=177.7

Q ss_pred             cccCCcEEEEecCCch-HHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRG-IGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~G-IG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..|+||++|||||++| ||+++|++|+++|++|++++|+.+...  .+.++++.+++...+.++..+.+|++++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~--~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDR--LAFYKQLYRDHARFDATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHH--HHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhh--hHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH
Confidence            4589999999999999 999999999999999999999865300  0112334555555677899999999999999999


Q ss_pred             HHHHHH----hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          84 VNAAVD----KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        84 ~~~i~~----~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      ++++.+    .||+||+||||||+..                                                 +++.+
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d-------------------------------------------------~~~~~ 2240 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPT-------------------------------------------------LLFPF 2240 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCS-------------------------------------------------EEEEC
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCccc-------------------------------------------------ccCcc
Confidence            999998    8999999999999721                                                 11111


Q ss_pred             ccccccCCCCCCchhhH----HHHHhhhhhHHHHHHHhhhHHhHhcCCC----eEEEeCCCCCCCCCccCCchhhhHhhH
Q psy6113         160 ASAISLTDTANTPLKKY----DLMNQINARGTYLVSQKCLPYLKKSNHA----HILNISPPLNLNPFWFKNHVAYTISKY  231 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~----~~~~~vN~~g~~~l~~~~~p~m~~~~~g----~Iv~vsS~~~~~~~~~~~~~~Y~asKa  231 (406)
                      ++...     +.+.++|    +..+++|+.+++.+++.+.|.|.+++.+    .|++.|+..+.    +++..+|++||+
T Consensus      2241 a~~~~-----~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~----~g~~~aYsASKa 2311 (3089)
T 3zen_D         2241 AAPRV-----AGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGM----FGGDGAYGEAKS 2311 (3089)
T ss_dssp             CCCCC-----CCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTS----CSSCSSHHHHGG
T ss_pred             ccccc-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCccccc----CCCchHHHHHHH
Confidence            11111     2233344    4459999999999999999999887642    34444544333    235568999999


Q ss_pred             HHHHHHHHHHHh--hcCCCeEEEEecchhhhhHHHHHHhcCCC---cccccccCChhhHHHHHHHhhcCCCCCc-cceEE
Q psy6113         232 GMSMCALGMAEE--FKGDNIAVNALWPRTAIYTAAIEMLTGGS---ADAKATSRKPEIMADAAYYILSSNPPSL-TGQFL  305 (406)
Q Consensus       232 al~~l~~~la~e--~~~~gI~vn~v~PG~~~~t~~~~~~~~~~---~~~~~~~~~pe~vA~~v~~L~s~~~~~~-tG~~i  305 (406)
                      |+.+|+|++|.|  +++ +|+||+|+||++.+|++........   .....+..+|+|||.+++||+|+.++++ +|+.+
T Consensus      2312 Al~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~ 2390 (3089)
T 3zen_D         2312 ALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAIVSAVEEAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPV 2390 (3089)
T ss_dssp             GHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTTHHHHGGGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCE
T ss_pred             HHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhHHHHHHhcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeE
Confidence            999999999999  665 6999999999855454322110000   0011234489999999999999876665 45655


Q ss_pred             -Ee--hhH
Q psy6113         306 -ID--DEV  310 (406)
Q Consensus       306 -~d--~g~  310 (406)
                       +|  ||.
T Consensus      2391 ~vdl~GG~ 2398 (3089)
T 3zen_D         2391 KVDLTGGL 2398 (3089)
T ss_dssp             EEECSBSC
T ss_pred             EEEcCCCc
Confidence             44  554

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=4.7e-28  Score=259.08  Aligned_cols=213  Identities=11%  Similarity=0.108  Sum_probs=172.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHH-HcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAA-KDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La-~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+|+++||||++|||+++|++|+ ++|+ +|++++|+....++    .++..++++..|.++.++.||++|.++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~----~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~  604 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASG----AAELVAQLTAYGAEVSLQACDVADRETLAKVLA  604 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTT----HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHH----HHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence            58999999999999999999999 7999 59999998654333    455677788889999999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.+.+ +||+||||||+.....+.                                                       
T Consensus       605 ~~~~~~-~id~lVnnAGv~~~~~~~-------------------------------------------------------  628 (795)
T 3slk_A          605 SIPDEH-PLTAVVHAAGVLDDGVSE-------------------------------------------------------  628 (795)
T ss_dssp             TSCTTS-CEEEEEECCCCCCCCCGG-------------------------------------------------------
T ss_pred             HHHHhC-CCEEEEECCCcCCCCchh-------------------------------------------------------
Confidence            998876 999999999987654433                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +++.++|++++++|+.|++++.+++.|.|      +||++||.++..+  .+++.+|++||+    |+++|+++++
T Consensus       629 ----~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g--~~g~~~YaAaka----~~~alA~~~~  692 (795)
T 3slk_A          629 ----SLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLG--SGGQGNYAAANS----FLDALAQQRQ  692 (795)
T ss_dssp             ----GCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHT--CSSCHHHHHHHH----HHHHHHHHHH
T ss_pred             ----hCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCC--CCCCHHHHHHHH----HHHHHHHHHH
Confidence                89999999999999999999999998887      8999999999887  489999999995    6777788888


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCC----cccccccCChhhHHHHHHHhhcCC
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGS----ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~----~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++||++|+|+||++.++.+........    ........+++++...+.+++...
T Consensus       693 ~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~  747 (795)
T 3slk_A          693 SRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGA  747 (795)
T ss_dssp             HTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSS
T ss_pred             HcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            889999999999654443332211100    011123457788887777766543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=6.4e-28  Score=244.58  Aligned_cols=215  Identities=13%  Similarity=0.123  Sum_probs=169.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++|||||++|||+++|++|+++|+ +|++++|+....+.    ..+..+++...+.++.++.||++|.++++++++++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~----~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPG----AAELRAELEQLGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT----HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHH----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            59999999999999999999999999 88999997544332    44566778888999999999999999999999998


Q ss_pred             HHhcCCccEEEeccccc-ccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          88 VDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .+. ++||+||||||+. .....                                                         
T Consensus       315 ~~~-g~ld~vVh~AGv~~~~~~l---------------------------------------------------------  336 (496)
T 3mje_A          315 PED-APLTAVFHSAGVAHDDAPV---------------------------------------------------------  336 (496)
T ss_dssp             CTT-SCEEEEEECCCCCCSCCCT---------------------------------------------------------
T ss_pred             HHh-CCCeEEEECCcccCCCCCc---------------------------------------------------------
Confidence            777 7999999999987 33332                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                        .+.+.++|+.++++|+.|++++.+.+.+.    ..++||++||.++..+  .+++..|++||+++++|++.    +++
T Consensus       337 --~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g--~~g~~~YaAaKa~ldala~~----~~~  404 (496)
T 3mje_A          337 --ADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWG--SGGQPGYAAANAYLDALAEH----RRS  404 (496)
T ss_dssp             --TTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTT--CTTCHHHHHHHHHHHHHHHH----HHH
T ss_pred             --ccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCC--CCCcHHHHHHHHHHHHHHHH----HHh
Confidence              38899999999999999999999887554    4589999999999877  47899999999999888775    445


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCCC--cccccccCChhhHHHHHHHhhcCCC
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGGS--ADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~~--~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +||++|+|+||+..++.|........  ........+|++++..+.+++....
T Consensus       405 ~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          405 LGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             TTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred             cCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence            69999999999543433221110000  0011223689999999999987543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=7.8e-26  Score=229.69  Aligned_cols=216  Identities=13%  Similarity=0.090  Sum_probs=168.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .+++++||||++|||++++++|+++|++ |++++|+......    +++..+++...+.++.++.||++|.++++++++.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~----~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG----AGELVAELEALGARTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT----HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHH----HHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHH
Confidence            5799999999999999999999999995 9999998753322    3455667777888999999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      + ..+++||+||||||+.......                                                        
T Consensus       301 i-~~~g~ld~VIh~AG~~~~~~l~--------------------------------------------------------  323 (486)
T 2fr1_A          301 I-GDDVPLSAVFHAAATLDDGTVD--------------------------------------------------------  323 (486)
T ss_dssp             S-CTTSCEEEEEECCCCCCCCCGG--------------------------------------------------------
T ss_pred             H-HhcCCCcEEEECCccCCCCccc--------------------------------------------------------
Confidence            8 6678999999999987543332                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|+.++++|+.|++++.+.+.+    .+.++||++||.++..+  .+++..|+++|++++.|++.+    +.
T Consensus       324 ---~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g--~~g~~~Yaaaka~l~~la~~~----~~  390 (486)
T 2fr1_A          324 ---TLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFG--APGLGGYAPGNAYLDGLAQQR----RS  390 (486)
T ss_dssp             ---GCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTC--CTTCTTTHHHHHHHHHHHHHH----HH
T ss_pred             ---cCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCC--CCCCHHHHHHHHHHHHHHHHH----Hh
Confidence               788999999999999999999998743    35689999999988776  378899999999999886654    45


Q ss_pred             CCeEEEEecchhhhhHHHHHHhc-CCCcccccccCChhhHHHHHHHhhcCCC
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLT-GGSADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~-~~~~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +||++++|+||+..++.|..... ...........+|+++++.+.+++....
T Consensus       391 ~gi~v~~i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          391 DGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             TTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             cCCeEEEEECCeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            69999999999643332332211 1111112245799999999999987543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=5e-25  Score=224.72  Aligned_cols=212  Identities=15%  Similarity=0.142  Sum_probs=166.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .+++++||||++|||++++++|+++|+ +|++++|+......    +.+..+++...+.++.++.||++|.++++++++.
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~----~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG----AAELAEELRGHGCEVVHAACDVAERDALAALVTA  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT----HHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH----HHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc
Confidence            579999999999999999999999999 69999998753322    3455667777788999999999999999998886


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                           +++|+||||||+.......                                                        
T Consensus       334 -----~~ld~VVh~AGv~~~~~~~--------------------------------------------------------  352 (511)
T 2z5l_A          334 -----YPPNAVFHTAGILDDAVID--------------------------------------------------------  352 (511)
T ss_dssp             -----SCCSEEEECCCCCCCBCGG--------------------------------------------------------
T ss_pred             -----CCCcEEEECCcccCCcccc--------------------------------------------------------
Confidence                 7899999999987544332                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                         +.+.++|+.++++|+.|++++.+.+.+.   .+.++||++||..+..+  .+++..|+++|++++.|++.+    +.
T Consensus       353 ---~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g--~~g~~~YaaaKa~ld~la~~~----~~  420 (511)
T 2z5l_A          353 ---TLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWG--NAGQGAYAAANAALDALAERR----RA  420 (511)
T ss_dssp             ---GCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTC--CTTBHHHHHHHHHHHHHHHHH----HT
T ss_pred             ---cCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCC--CCCCHHHHHHHHHHHHHHHHH----HH
Confidence               7889999999999999999999887432   14589999999998877  478999999999999998865    45


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcC-CCcccccccCChhhHHHHHHHhhcCC
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTG-GSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~-~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      .||++++|+||+...+.|...... ..........+|+++++.+..++...
T Consensus       421 ~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          421 AGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             TTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHHHHT
T ss_pred             cCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            699999999996434432211000 00011124578999999999988643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.91  E-value=3.6e-24  Score=200.97  Aligned_cols=185  Identities=16%  Similarity=0.110  Sum_probs=146.9

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |++|+++||||++|||++++++|+++|++|++++|+..+..                +.++.++.+|++|.++++++++ 
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------------~~~~~~~~~Dl~d~~~~~~~~~-   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------------GPNEECVQCDLADANAVNAMVA-   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------------CTTEEEEECCTTCHHHHHHHHT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------------CCCCEEEEcCCCCHHHHHHHHc-
Confidence            35789999999999999999999999999999999976532                3568899999999999988776 


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                            ++|+||||||+.                                                              
T Consensus        64 ------~~D~vi~~Ag~~--------------------------------------------------------------   75 (267)
T 3rft_A           64 ------GCDGIVHLGGIS--------------------------------------------------------------   75 (267)
T ss_dssp             ------TCSEEEECCSCC--------------------------------------------------------------
T ss_pred             ------CCCEEEECCCCc--------------------------------------------------------------
Confidence                  689999999962                                                              


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC----------CccCCchhhhHhhHHHHHH
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP----------FWFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~----------~~~~~~~~Y~asKaal~~l  236 (406)
                           +.++|+.++++|+.|++++++++    ++++.++||++||..++..          .+..+...|++||++++.+
T Consensus        76 -----~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  146 (267)
T 3rft_A           76 -----VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENL  146 (267)
T ss_dssp             -----SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             -----CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence                 12347889999999999999998    4456689999999876621          1124557899999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcC
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++.++.++   |+++++|.||.+ .+.      .........+..++|+++.+..++..
T Consensus       147 ~~~~a~~~---g~~~~~vr~~~v-~~~------~~~~~~~~~~~~~~d~a~~~~~~~~~  195 (267)
T 3rft_A          147 ARMYFDKF---GQETALVRIGSC-TPE------PNNYRMLSTWFSHDDFVSLIEAVFRA  195 (267)
T ss_dssp             HHHHHHHH---CCCEEEEEECBC-SSS------CCSTTHHHHBCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHh---CCeEEEEEeecc-cCC------CCCCCceeeEEcHHHHHHHHHHHHhC
Confidence            99999886   677888888743 221      11112234467899999999988864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=2.1e-24  Score=198.54  Aligned_cols=205  Identities=13%  Similarity=0.121  Sum_probs=147.3

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCee-eeeeecCCChHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC-LPCIVDIRDEHAVQ   81 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~-~~~~~Dl~~~~~v~   81 (406)
                      +..+|+||+++||||+|+||++++++|+++|++|++++|+.++.           +++...  .+ .++.+|++      
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~-----------~~~~~~--~~~~~~~~Dl~------   75 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG-----------PELRER--GASDIVVANLE------   75 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-----------HHHHHT--TCSEEEECCTT------
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH-----------HHHHhC--CCceEEEcccH------
Confidence            35678999999999999999999999999999999999987642           222222  46 78899998      


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                         +.+.+.++++|+||||||...                                                        
T Consensus        76 ---~~~~~~~~~~D~vi~~ag~~~--------------------------------------------------------   96 (236)
T 3e8x_A           76 ---EDFSHAFASIDAVVFAAGSGP--------------------------------------------------------   96 (236)
T ss_dssp             ---SCCGGGGTTCSEEEECCCCCT--------------------------------------------------------
T ss_pred             ---HHHHHHHcCCCEEEECCCCCC--------------------------------------------------------
Confidence               344556678999999999532                                                        


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc-CCchhhhHhhHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF-KNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~-~~~~~Y~asKaal~~l~~~l  240 (406)
                                 .++|+..+++|+.+++++++++    ++.+.++||++||..+..+... +....|+.+|++++.+.+  
T Consensus        97 -----------~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~--  159 (236)
T 3e8x_A           97 -----------HTGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK--  159 (236)
T ss_dssp             -----------TSCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH--
T ss_pred             -----------CCCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH--
Confidence                       2347889999999999999988    4456689999999777655211 356899999999998876  


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhc-CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLT-GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~-~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                           ..||++++|+||++.......... .........+..++|+|++++++++++.  .+|+.+ +++|
T Consensus       160 -----~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~v~~~  223 (236)
T 3e8x_A          160 -----RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH--TIGKTFEVLNG  223 (236)
T ss_dssp             -----HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             -----HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc--ccCCeEEEeCC
Confidence                 568999999999643321000000 0000112445689999999999997643  677776 5554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.90  E-value=1.5e-23  Score=193.29  Aligned_cols=203  Identities=13%  Similarity=0.110  Sum_probs=149.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ++++|+++||||+||||++++++|+++|+  +|++++|+.++....       .      ..++.++.+|++|+++++++
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-------~------~~~~~~~~~D~~d~~~~~~~   81 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------A------YKNVNQEVVDFEKLDDYASA   81 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------G------GGGCEEEECCGGGGGGGGGG
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-------c------cCCceEEecCcCCHHHHHHH
Confidence            46789999999999999999999999999  999999998765431       0      12477889999999887765


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++       ++|+||||||...                                                          
T Consensus        82 ~~-------~~d~vi~~ag~~~----------------------------------------------------------   96 (242)
T 2bka_A           82 FQ-------GHDVGFCCLGTTR----------------------------------------------------------   96 (242)
T ss_dssp             GS-------SCSEEEECCCCCH----------------------------------------------------------
T ss_pred             hc-------CCCEEEECCCccc----------------------------------------------------------
Confidence            43       7999999999532                                                          


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                              ...+++..+++|+.+++.+++++    ++.+.++||++||..+..+    ....|+++|++++.+++.+   
T Consensus        97 --------~~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~----~~~~Y~~sK~~~e~~~~~~---  157 (242)
T 2bka_A           97 --------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS----SNFLYLQVKGEVEAKVEEL---  157 (242)
T ss_dssp             --------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT----CSSHHHHHHHHHHHHHHTT---
T ss_pred             --------ccCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC----CcchHHHHHHHHHHHHHhc---
Confidence                    12346778899999999888765    4556689999999887643    3468999999999998764   


Q ss_pred             hcCCCe-EEEEecchhhhhHH----H----HHHhcCCCc--ccccccCChhhHHHHHHHhhcCCCCCccceEEEehhHH
Q psy6113         244 FKGDNI-AVNALWPRTAIYTA----A----IEMLTGGSA--DAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVL  311 (406)
Q Consensus       244 ~~~~gI-~vn~v~PG~~~~t~----~----~~~~~~~~~--~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~~  311 (406)
                          ++ ++++|+||++.+..    .    .+.......  ....++..|+|+|++++++++++..  .|..++...-+
T Consensus       158 ----~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~~i  230 (242)
T 2bka_A          158 ----KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD--KQMELLENKAI  230 (242)
T ss_dssp             ----CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC--SSEEEEEHHHH
T ss_pred             ----CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc--cCeeEeeHHHH
Confidence                45 89999999643221    1    111111111  1134567899999999999987543  35666665444

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.89  E-value=7.8e-23  Score=197.42  Aligned_cols=257  Identities=12%  Similarity=0.008  Sum_probs=175.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHH-HcCCeEEEEecCCCCCCCCccc-----HHHHHHHHHHcCCeeeeeeecCCChHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHPKLPGT-----IYSAAKEVEDAGGNCLPCIVDIRDEHA   79 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~~~~~~~~~-----i~~~~~~~~~~g~~~~~~~~Dl~~~~~   79 (406)
                      .+.+|++||||||+|||+|++.+|+ +.|++|++++|..+..++..++     .....+++++.|.++..+.||++++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4678999999999999999999999 7899999999988776553322     344567788899999999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccc--c-ceEEeccchhhHHHHHHHHHhhcCCcceE
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR--G-TYLVKASQGLEIQSAVNAAVDKFGGIDIL  156 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~g~id~l  156 (406)
                      ++++++++.+.+|+||+||||++......+.....  |.   + .+.  + .+..                      ..+
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~--~~---S-~LKpi~~~~~~----------------------~~l  178 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIM--HK---S-VLKPFGKTFTG----------------------KTV  178 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCE--EE---C-CCCCSSSCEEE----------------------EEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCce--ee---e-eeccccccccc----------------------ccc
Confidence            99999999999999999999999865332210000  00   0 000  0 0000                      000


Q ss_pred             eccccccccCCCCCCchhhH---HHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHH
Q psy6113         157 VNNASAISLTDTANTPLKKY---DLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGM  233 (406)
Q Consensus       157 i~~ag~~~~~~~~~~~~~~~---~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal  233 (406)
                      =.....+....+...+.+++   ..+|.....+.+...+...++|.+.  +++|.+|+..+....+...+..++++|++|
T Consensus       179 dt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~G--~siva~SYiGse~t~P~Y~~G~mG~AKaaL  256 (401)
T 4ggo_A          179 DPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEEG--CITLAYSYIGPEATQALYRKGTIGKAKEHL  256 (401)
T ss_dssp             CTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEE--EEEEEEECCCCGGGHHHHTTSHHHHHHHHH
T ss_pred             cccccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccCC--ceEEEEeccCcceeecCCCccHHHHHHHHH
Confidence            00001111122223444444   4555556667777777777777654  899999998876542222345789999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccCChhhHHHHHHHhhcC
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +..++.|+.++++  +++|+++||. +.|.....++..+      ...++..++.|.+.+.+..|..+
T Consensus       257 Ea~~r~La~eL~~--~~a~v~v~~a-~vT~AssaIP~~ply~~~l~kvmk~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          257 EATAHRLNKENPS--IRAFVSVNKG-LVTRASAVIPVIPLYLASLFKVMKEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             HHHHHHHHHHCTT--EEEEEEECCC-CCCTTGGGSSSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCC--CcEEEEEcCc-cccchhhcCCCchHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence            9999999999984  8999999884 5553333332211      01234456789999999999865

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=1.3e-22  Score=184.74  Aligned_cols=189  Identities=12%  Similarity=0.087  Sum_probs=141.9

Q ss_pred             cEEEEecCCchHHHHHHHHHH-HcCCeEEEEecCCC-CCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAA-KDGANIVIAAKTAE-PHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~-~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      |+++||||++|||++++++|+ ++|++|++++|+.+ ++++           +...+.++.++.+|++|+++++++++  
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~~D~~d~~~~~~~~~--   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP-----------EIIDHERVTVIEGSFQNPGXLEQAVT--   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH-----------HHHTSTTEEEEECCTTCHHHHHHHHT--
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh-----------hccCCCceEEEECCCCCHHHHHHHHc--
Confidence            789999999999999999999 89999999999876 4332           22345678999999999999888765  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|+||||||..                                                               
T Consensus        73 -----~~d~vv~~ag~~---------------------------------------------------------------   84 (221)
T 3r6d_A           73 -----NAEVVFVGAMES---------------------------------------------------------------   84 (221)
T ss_dssp             -----TCSEEEESCCCC---------------------------------------------------------------
T ss_pred             -----CCCEEEEcCCCC---------------------------------------------------------------
Confidence                 679999999831                                                               


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCch----------hhhHhhHHHHHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHV----------AYTISKYGMSMCA  237 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~----------~Y~asKaal~~l~  237 (406)
                                     |+.     ++.+++.|++.+.++||++||..+..+.  +...          .|+.+|.+++.+.
T Consensus        85 ---------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~--~~~~~~~~~~~~~~~y~~~K~~~e~~~  142 (221)
T 3r6d_A           85 ---------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEF--PVALEKWTFDNLPISYVQGERQARNVL  142 (221)
T ss_dssp             ---------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCS--CHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             ---------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCC--CcccccccccccccHHHHHHHHHHHHH
Confidence                           222     7888899998888899999999887652  3333          8999999998877


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhc--CCCcccccccCChhhHHHHHHHhh--cCCCCCccceEEEeh
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLT--GGSADAKATSRKPEIMADAAYYIL--SSNPPSLTGQFLIDD  308 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~--~~~~~~~~~~~~pe~vA~~v~~L~--s~~~~~~tG~~i~d~  308 (406)
                      +.       .||++++|+||++.+......+.  ...........+++|+|+++++++  ++++.++++.+.+.+
T Consensus       143 ~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~  210 (221)
T 3r6d_A          143 RE-------SNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGE  210 (221)
T ss_dssp             HH-------SCSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEEC
T ss_pred             Hh-------CCCCEEEEechhhcCCCCCcceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecC
Confidence            53       58999999999753321111110  000011122567899999999999  887777777766654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=2.3e-22  Score=236.12  Aligned_cols=168  Identities=14%  Similarity=0.093  Sum_probs=132.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .+|+++||||++|||+++|+.|+++|++ |++++|+..+.+.    ..+..+++...+.++.++.||++|.+++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~----~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGY----QARQVREWRRQGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHH----HHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHH----HHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHH
Confidence            5899999999999999999999999997 8888998765422    2234555666788999999999999999999999


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +. .+|+||+||||||+.....+                                                         
T Consensus      1959 ~~-~~g~id~lVnnAgv~~~~~~--------------------------------------------------------- 1980 (2512)
T 2vz8_A         1959 AT-QLGPVGGVFNLAMVLRDAVL--------------------------------------------------------- 1980 (2512)
T ss_dssp             HH-HHSCEEEEEECCCC---------------------------------------------------------------
T ss_pred             HH-hcCCCcEEEECCCcCCCCch---------------------------------------------------------
Confidence            87 48999999999998654333                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                        .+++.++|++++++|+.|++++.+++.|.|.+.  ++||++||.++..+  .+++.+|++||+++.+|++.+..+
T Consensus      1981 --~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g--~~g~~~Y~aaKaal~~l~~~rr~~ 2051 (2512)
T 2vz8_A         1981 --ENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRG--NAGQANYGFANSAMERICEKRRHD 2051 (2512)
T ss_dssp             ------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTT--CTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred             --hhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCC--CCCcHHHHHHHHHHHHHHHHHHHC
Confidence              388999999999999999999999999988764  89999999998877  478999999999999999965544

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.87  E-value=2.3e-21  Score=187.41  Aligned_cols=209  Identities=13%  Similarity=0.103  Sum_probs=152.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |++|+++||||+|+||++++++|+++|++|++++|+.++...         ..+...  ..++.++.+|++|.+++.+++
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   71 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS---------WRLKELGIENDVKIIHMDLLEFSNIIRTI   71 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT---------HHHHHTTCTTTEEECCCCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc---------ccHhhccccCceeEEECCCCCHHHHHHHH
Confidence            467999999999999999999999999999999998765331         112222  246888999999999999988


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+     ++|++|||||....                                                          
T Consensus        72 ~~~-----~~d~vih~A~~~~~----------------------------------------------------------   88 (345)
T 2z1m_A           72 EKV-----QPDEVYNLAAQSFV----------------------------------------------------------   88 (345)
T ss_dssp             HHH-----CCSEEEECCCCCCH----------------------------------------------------------
T ss_pred             Hhc-----CCCEEEECCCCcch----------------------------------------------------------
Confidence            766     79999999996421                                                          


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC---------CccCCchhhhHhhHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP---------FWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~---------~~~~~~~~Y~asKaal~~  235 (406)
                           +.+.++++..+++|+.+++++++++.+.   ...++||++||...+..         .+..+...|+.||++.+.
T Consensus        89 -----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           89 -----GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW  160 (345)
T ss_dssp             -----HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             -----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence                 2234567889999999999999998742   11379999999753211         112456789999999999


Q ss_pred             HHHHHHHhhc---CCCeEEEEecchhhhhHHHH-------HH-hcCCCc-------ccccccCChhhHHHHHHHhhcCC
Q psy6113         236 CALGMAEEFK---GDNIAVNALWPRTAIYTAAI-------EM-LTGGSA-------DAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       236 l~~~la~e~~---~~gI~vn~v~PG~~~~t~~~-------~~-~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +++.++.+++   ..++.+|.+.||. ..+.+.       .. ......       .....+..++|+|++++++++..
T Consensus       161 ~~~~~~~~~~~~~~~~r~~~~~gpg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~  238 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILFNHESPLR-GIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP  238 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTS-CTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHhCCceEeeeeeeecCCCC-CCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence            9999999876   4456788899984 222211       11 111110       11123678999999999999753

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.86  E-value=4e-21  Score=185.53  Aligned_cols=215  Identities=16%  Similarity=0.113  Sum_probs=155.5

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +..++++++++||||+|+||++++++|+++|++|++++|+.....+.       .+.+    .++.++.+|++|.+++++
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~l----~~v~~~~~Dl~d~~~~~~   82 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREV-------LPPV----AGLSVIEGSVTDAGLLER   82 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGG-------SCSC----TTEEEEECCTTCHHHHHH
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhh-------hhcc----CCceEEEeeCCCHHHHHH
Confidence            34678999999999999999999999999999999999976543210       0001    357889999999999998


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++     ++|+||||||....                                                        
T Consensus        83 ~~~~~-----~~D~vih~A~~~~~--------------------------------------------------------  101 (330)
T 2pzm_A           83 AFDSF-----KPTHVVHSAAAYKD--------------------------------------------------------  101 (330)
T ss_dssp             HHHHH-----CCSEEEECCCCCSC--------------------------------------------------------
T ss_pred             HHhhc-----CCCEEEECCccCCC--------------------------------------------------------
Confidence            88765     79999999996432                                                        


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc---C------CchhhhHhhHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF---K------NHVAYTISKYGM  233 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~---~------~~~~Y~asKaal  233 (406)
                             . +.++++  +++|+.+++++++++.    +.+.++||++||...+.+...   +      +...|+.||+++
T Consensus       102 -------~-~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~  167 (330)
T 2pzm_A          102 -------P-DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAG  167 (330)
T ss_dssp             -------T-TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             -------c-cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHH
Confidence                   1 234455  8999999999999986    345679999999876543211   1      467899999999


Q ss_pred             HHHHHHHHHhhcCCCeE-EEEecchhh--hhHHHHHHhcCCCcc---c-ccccCChhhHHH-HHHHhhcCCCCCccceEE
Q psy6113         234 SMCALGMAEEFKGDNIA-VNALWPRTA--IYTAAIEMLTGGSAD---A-KATSRKPEIMAD-AAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~-vn~v~PG~~--~~t~~~~~~~~~~~~---~-~~~~~~pe~vA~-~v~~L~s~~~~~~tG~~i  305 (406)
                      +.+++.+  ++....|| +|.+.||..  ....+..........   . ...+..++|+|+ +++++++...    |+.+
T Consensus       168 e~~~~~~--~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~----g~~~  241 (330)
T 2pzm_A          168 EAFLMMS--DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP----TGVF  241 (330)
T ss_dssp             HHHHHTC--SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCC----CEEE
T ss_pred             HHHHHHc--CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCC----CCEE
Confidence            9999988  66666788 788889830  111122222111110   1 345678999999 9999997632    5555


Q ss_pred             -Eehh
Q psy6113         306 -IDDE  309 (406)
Q Consensus       306 -~d~g  309 (406)
                       +++|
T Consensus       242 ~v~~~  246 (330)
T 2pzm_A          242 NVSTG  246 (330)
T ss_dssp             EESCS
T ss_pred             EeCCC
Confidence             5554

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.86  E-value=2.2e-21  Score=188.76  Aligned_cols=209  Identities=16%  Similarity=0.136  Sum_probs=155.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHc-CC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKD-GA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~-Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++|+++||||+|+||++++++|+++ |+ +|++++|+..+.       .....++.  ..++.++.+|++|.+++.++
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~-------~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~   88 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQ-------SEMAMEFN--DPRMRFFIGDVRDLERLNYA   88 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHH-------HHHHHHHC--CTTEEEEECCTTCHHHHHHH
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhH-------HHHHHHhc--CCCEEEEECCCCCHHHHHHH
Confidence            478999999999999999999999999 98 999999975431       12222221  35688999999999988776


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++       ++|+||||||.....                                                        
T Consensus        89 ~~-------~~D~Vih~Aa~~~~~--------------------------------------------------------  105 (344)
T 2gn4_A           89 LE-------GVDICIHAAALKHVP--------------------------------------------------------  105 (344)
T ss_dssp             TT-------TCSEEEECCCCCCHH--------------------------------------------------------
T ss_pred             Hh-------cCCEEEECCCCCCCC--------------------------------------------------------
Confidence            54       689999999964310                                                        


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                             ....+....+++|+.|+.++++++.+.    +.++||++||..+..|     ...|++||++++.++++++.+
T Consensus       106 -------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p-----~~~Y~~sK~~~E~~~~~~~~~  169 (344)
T 2gn4_A          106 -------IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP-----INLYGATKLCSDKLFVSANNF  169 (344)
T ss_dssp             -------HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC-----CSHHHHHHHHHHHHHHHGGGC
T ss_pred             -------chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC-----ccHHHHHHHHHHHHHHHHHHH
Confidence                   112234678999999999999999654    4579999999766543     468999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhh------HHHHHHhc-CC-C-----cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         244 FKGDNIAVNALWPRTAIY------TAAIEMLT-GG-S-----ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~------t~~~~~~~-~~-~-----~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      +++.|+++++|.||.+..      ..+.+... .. .     ......+..++|+|+++++++...   ..|+++
T Consensus       170 ~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~---~~g~~~  241 (344)
T 2gn4_A          170 KGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM---HGGEIF  241 (344)
T ss_dssp             CCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC---CSSCEE
T ss_pred             hCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc---cCCCEE
Confidence            988999999999996432      12222211 11 0     111233578999999999998653   245544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.86  E-value=3.1e-21  Score=186.64  Aligned_cols=170  Identities=17%  Similarity=0.107  Sum_probs=131.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .+++++||||+|+||++++++|+++|++|++++|+.+...+       ..+.+.. .+.++.++.+|++|+++++++++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKRE-------AIARIEKITGKTPAFHETDVSDERALARIFDA   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTH-------HHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHH-------HHHHHHhhcCCCceEEEeecCCHHHHHHHHhc
Confidence            46899999999999999999999999999999998776442       2333332 356788999999999999998875


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                           +++|++|||||.....                                                           
T Consensus        77 -----~~~d~vih~A~~~~~~-----------------------------------------------------------   92 (341)
T 3enk_A           77 -----HPITAAIHFAALKAVG-----------------------------------------------------------   92 (341)
T ss_dssp             -----SCCCEEEECCCCCCHH-----------------------------------------------------------
T ss_pred             -----cCCcEEEECccccccC-----------------------------------------------------------
Confidence                 5899999999975321                                                           


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHH
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~  237 (406)
                          ...+.....+++|+.+++.+++++    ++.+.++||++||...+...         +......|+.||++.+.++
T Consensus        93 ----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  164 (341)
T 3enk_A           93 ----ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQIL  164 (341)
T ss_dssp             ----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHH
T ss_pred             ----ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence                122334567888999999887654    56666899999996654211         1123468999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchh
Q psy6113         238 LGMAEEFKGDNIAVNALWPRT  258 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~  258 (406)
                      +.++.++.  +++++.+.|+.
T Consensus       165 ~~~~~~~~--~~~~~~lRp~~  183 (341)
T 3enk_A          165 RDVEAADP--SWRVATLRYFN  183 (341)
T ss_dssp             HHHHHHCT--TCEEEEEEECE
T ss_pred             HHHhhcCC--CceEEEEeecc
Confidence            99999864  58899988864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.86  E-value=5.7e-21  Score=183.22  Aligned_cols=210  Identities=15%  Similarity=0.130  Sum_probs=153.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..+.++++||||+|+||++++++|+++|++|++++|+... ..           +     ++.++.+|++|+++++++++
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l-----~~~~~~~Dl~d~~~~~~~~~   71 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------P-----NVEMISLDIMDSQRVKKVIS   71 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------T-----TEEEEECCTTCHHHHHHHHH
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------c-----eeeEEECCCCCHHHHHHHHH
Confidence            3467899999999999999999999999999999998764 21           1     47788999999999988877


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .     +++|+||||||....                                                           
T Consensus        72 ~-----~~~d~vih~A~~~~~-----------------------------------------------------------   87 (321)
T 2pk3_A           72 D-----IKPDYIFHLAAKSSV-----------------------------------------------------------   87 (321)
T ss_dssp             H-----HCCSEEEECCSCCCH-----------------------------------------------------------
T ss_pred             h-----cCCCEEEEcCcccch-----------------------------------------------------------
Confidence            5     479999999996432                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------ccCCchhhhHhhHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------WFKNHVAYTISKYGMS  234 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------~~~~~~~Y~asKaal~  234 (406)
                          ..+.+++...+++|+.++.++++++ +.+  .+.++||++||...+.+.           +..+...|+.||++.+
T Consensus        88 ----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E  160 (321)
T 2pk3_A           88 ----KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVG  160 (321)
T ss_dssp             ----HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHH
T ss_pred             ----hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHH
Confidence                1233467889999999999999998 554  245899999998654321           1235678999999999


Q ss_pred             HHHHHHHHhhcCCCeEEEEecchhhhhH---------HHHHHh-c---C--CC------cccccccCChhhHHHHHHHhh
Q psy6113         235 MCALGMAEEFKGDNIAVNALWPRTAIYT---------AAIEML-T---G--GS------ADAKATSRKPEIMADAAYYIL  293 (406)
Q Consensus       235 ~l~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~~-~---~--~~------~~~~~~~~~pe~vA~~v~~L~  293 (406)
                      .+++.++.++   |++++.+.||++...         .+.... .   .  ..      ......+..++|+|+++++++
T Consensus       161 ~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~  237 (321)
T 2pk3_A          161 MLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLS  237 (321)
T ss_dssp             HHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHH
Confidence            9999999875   799999999753211         111111 1   1  11      112234568999999999999


Q ss_pred             cCCCCCccceEE-Eehh
Q psy6113         294 SSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       294 s~~~~~~tG~~i-~d~g  309 (406)
                      ...   .+|+.+ +.+|
T Consensus       238 ~~~---~~g~~~~i~~~  251 (321)
T 2pk3_A          238 QYG---KTGDVYNVCSG  251 (321)
T ss_dssp             HHC---CTTCEEEESCS
T ss_pred             hCC---CCCCeEEeCCC
Confidence            753   356555 5444

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.86  E-value=8.7e-21  Score=184.86  Aligned_cols=215  Identities=16%  Similarity=0.105  Sum_probs=159.3

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |++...+++++++||||+|+||++++++|+++|++|++++|+.++...       ....+. .+.++.++.+|+++++++
T Consensus         1 mi~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~-~~~~~~~~~~Dl~d~~~~   72 (357)
T 1rkx_A            1 MINNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-------LFETAR-VADGMQSEIGDIRDQNKL   72 (357)
T ss_dssp             -CCHHHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-------HHHHTT-TTTTSEEEECCTTCHHHH
T ss_pred             CCCchhhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccch-------hhHhhc-cCCceEEEEccccCHHHH
Confidence            677777899999999999999999999999999999999998776443       122211 245688899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA  160 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~a  160 (406)
                      .++++.+     ++|+||||||....                                                      
T Consensus        73 ~~~~~~~-----~~d~vih~A~~~~~------------------------------------------------------   93 (357)
T 1rkx_A           73 LESIREF-----QPEIVFHMAAQPLV------------------------------------------------------   93 (357)
T ss_dssp             HHHHHHH-----CCSEEEECCSCCCH------------------------------------------------------
T ss_pred             HHHHHhc-----CCCEEEECCCCccc------------------------------------------------------
Confidence            9888765     79999999995211                                                      


Q ss_pred             cccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------ccCCchhhhHhh
Q psy6113         161 SAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------WFKNHVAYTISK  230 (406)
Q Consensus       161 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------~~~~~~~Y~asK  230 (406)
                               ..+.+++...+++|+.++..+++++.+.   .+.++||++||...+...          +..+...|+.||
T Consensus        94 ---------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK  161 (357)
T 1rkx_A           94 ---------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSK  161 (357)
T ss_dssp             ---------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred             ---------ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHH
Confidence                     2345667889999999999999998653   225799999997533210          123567899999


Q ss_pred             HHHHHHHHHHHHhhc------CCCeEEEEecchhhhhH----------HHHHHhcCCCc------ccccccCChhhHHHH
Q psy6113         231 YGMSMCALGMAEEFK------GDNIAVNALWPRTAIYT----------AAIEMLTGGSA------DAKATSRKPEIMADA  288 (406)
Q Consensus       231 aal~~l~~~la~e~~------~~gI~vn~v~PG~~~~t----------~~~~~~~~~~~------~~~~~~~~pe~vA~~  288 (406)
                      ++.+.+++.++.++.      +.|+++++|.||++...          .+.........      .....+...+|+|++
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a  241 (357)
T 1rkx_A          162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG  241 (357)
T ss_dssp             HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHH
Confidence            999999999999885      45899999999854321          11121111110      111235578999999


Q ss_pred             HHHhhc
Q psy6113         289 AYYILS  294 (406)
Q Consensus       289 v~~L~s  294 (406)
                      ++.++.
T Consensus       242 ~~~~~~  247 (357)
T 1rkx_A          242 YLLLAQ  247 (357)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.85  E-value=2.1e-21  Score=178.67  Aligned_cols=192  Identities=13%  Similarity=0.086  Sum_probs=131.1

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+..|+++||||++|||++++++|+++| ++|++++|+.++..++             ....+.++.+|++|++++++++
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------------~~~~~~~~~~Dl~d~~~~~~~~   86 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------------YPTNSQIIMGDVLNHAALKQAM   86 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------------ccCCcEEEEecCCCHHHHHHHh
Confidence            4456899999999999999999999999 8999999998765542             1236888999999999988876


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       ++|+||||||..                                                            
T Consensus        87 ~-------~~D~vv~~a~~~------------------------------------------------------------   99 (236)
T 3qvo_A           87 Q-------GQDIVYANLTGE------------------------------------------------------------   99 (236)
T ss_dssp             T-------TCSEEEEECCST------------------------------------------------------------
T ss_pred             c-------CCCEEEEcCCCC------------------------------------------------------------
Confidence            5       579999999831                                                            


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccC-----------CchhhhHhhHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK-----------NHVAYTISKYGM  233 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~-----------~~~~Y~asKaal  233 (406)
                           .                ....++.+++.|++++.++||++||...+.+.+..           ....|..+|   
T Consensus       100 -----~----------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  155 (236)
T 3qvo_A          100 -----D----------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA---  155 (236)
T ss_dssp             -----T----------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHH---
T ss_pred             -----c----------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHH---
Confidence                 0                01235678888898888999999998876542110           012333332   


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhc--CCCcccccccCChhhHHHHHHHhhcCCCCCccceEEEehhH
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLT--GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV  310 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~--~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~  310 (406)
                              ..+.+.||++++|+||++.+.. .....  ........++.+|+|+|++++++++++..+++..+.++++.
T Consensus       156 --------~~l~~~gi~~~~vrPg~i~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          156 --------DAIEASGLEYTILRPAWLTDED-IIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             --------HHHHTSCSEEEEEEECEEECCS-CCCCEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             --------HHHHHCCCCEEEEeCCcccCCC-CcceEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence                    2334679999999999743321 11000  01111123457899999999999998776774444466543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.85  E-value=1.1e-20  Score=182.50  Aligned_cols=215  Identities=17%  Similarity=0.135  Sum_probs=153.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeee-eecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPC-IVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~-~~Dl~~~~~v~~   82 (406)
                      ..+++++++||||+|+||++++++|+++|++|++++|+.++.       ......+.. .+.++.++ .+|++|.+++++
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   79 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-------ANLQKRWDAKYPGRFETAVVEDMLKQGAYDE   79 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccH-------HHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence            357899999999999999999999999999999999975431       122222222 23567777 799999988766


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++       ++|+||||||....                                                        
T Consensus        80 ~~~-------~~d~vih~A~~~~~--------------------------------------------------------   96 (342)
T 1y1p_A           80 VIK-------GAAGVAHIASVVSF--------------------------------------------------------   96 (342)
T ss_dssp             TTT-------TCSEEEECCCCCSC--------------------------------------------------------
T ss_pred             HHc-------CCCEEEEeCCCCCC--------------------------------------------------------
Confidence            543       68999999996421                                                        


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-c----------------------
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-W----------------------  219 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-~----------------------  219 (406)
                             .   +++...+++|+.++.++++++.+.   .+.++||++||...+... .                      
T Consensus        97 -------~---~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           97 -------S---NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             -------C---SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             -------C---CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence                   1   235678999999999999988642   345799999998665211 0                      


Q ss_pred             ------cCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH------------HHHHHh-cCCCcc-----c
Q psy6113         220 ------FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT------------AAIEML-TGGSAD-----A  275 (406)
Q Consensus       220 ------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t------------~~~~~~-~~~~~~-----~  275 (406)
                            ..+...|+.||++.+.+++.++.+++. +++++++.||++...            .+.... ......     .
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMP  242 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCC
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCC
Confidence                  013468999999999999999999876 899999999853221            111111 111100     1


Q ss_pred             ccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         276 KATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       276 ~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ...+..++|+|+++++++..  ...+|+.+
T Consensus       243 ~~~~v~v~Dva~a~~~~~~~--~~~~g~~~  270 (342)
T 1y1p_A          243 PQYYVSAVDIGLLHLGCLVL--PQIERRRV  270 (342)
T ss_dssp             SEEEEEHHHHHHHHHHHHHC--TTCCSCEE
T ss_pred             cCCEeEHHHHHHHHHHHHcC--cccCCceE
Confidence            23456899999999998864  23566544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.85  E-value=7.3e-21  Score=183.62  Aligned_cols=216  Identities=14%  Similarity=0.125  Sum_probs=151.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++++||||+|+||++++++|+++|  ++|++++|+......  +.+    .++. .+.++.++.+|++|.+++++++ 
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~--~~~----~~~~-~~~~~~~~~~Dl~d~~~~~~~~-   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNP--ANL----KDLE-DDPRYTFVKGDVADYELVKELV-   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGG----TTTT-TCTTEEEEECCTTCHHHHHHHH-
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCch--hHH----hhhc-cCCceEEEEcCCCCHHHHHHHh-
Confidence            34579999999999999999999997  899999987532110  001    1111 1456888999999999888776 


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                            +++|+||||||....                                                           
T Consensus        74 ------~~~d~vih~A~~~~~-----------------------------------------------------------   88 (336)
T 2hun_A           74 ------RKVDGVVHLAAESHV-----------------------------------------------------------   88 (336)
T ss_dssp             ------HTCSEEEECCCCCCH-----------------------------------------------------------
T ss_pred             ------hCCCEEEECCCCcCh-----------------------------------------------------------
Confidence                  379999999996421                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l  236 (406)
                          +.+.++++..+++|+.++.++++++.+.   ...++||++||...+...         +..+...|+.||++.+.+
T Consensus        89 ----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  161 (336)
T 2hun_A           89 ----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDML  161 (336)
T ss_dssp             ----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHH
T ss_pred             ----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHH
Confidence                2234567789999999999999999776   223799999997532211         124567899999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhH---------HHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYT---------AAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      ++.++.++   |++++.|.||.+...         .+.........       .....+..++|+|+++++++.+.   .
T Consensus       162 ~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~  235 (336)
T 2hun_A          162 VLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG---E  235 (336)
T ss_dssp             HHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC---C
T ss_pred             HHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC---C
Confidence            99999875   799999999853211         11111111111       11234567999999999998642   3


Q ss_pred             cceEE-Eehh
Q psy6113         301 TGQFL-IDDE  309 (406)
Q Consensus       301 tG~~i-~d~g  309 (406)
                      +|+.+ +.+|
T Consensus       236 ~g~~~~v~~~  245 (336)
T 2hun_A          236 SREIYNISAG  245 (336)
T ss_dssp             TTCEEEECCS
T ss_pred             CCCEEEeCCC
Confidence            67655 5554

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.84  E-value=1e-20  Score=183.19  Aligned_cols=218  Identities=16%  Similarity=0.141  Sum_probs=156.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++||||+|+||++++++|+++|++|++++|+.....      ......+.. .+++.++.+|++|+++++++++..  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~--   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA------TDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY--   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH------HHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc------hhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc--
Confidence            57999999999999999999999999999998643211      112233333 346888999999999998888752  


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|+||||||....                                                               
T Consensus        73 ---~~d~vih~A~~~~~---------------------------------------------------------------   86 (347)
T 1orr_A           73 ---MPDSCFHLAGQVAM---------------------------------------------------------------   86 (347)
T ss_dssp             ---CCSEEEECCCCCCH---------------------------------------------------------------
T ss_pred             ---CCCEEEECCcccCh---------------------------------------------------------------
Confidence               79999999996421                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-------------------------ccCCch
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-------------------------WFKNHV  224 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-------------------------~~~~~~  224 (406)
                      +.+.+++...+++|+.++.++++++.+.+.   .++||++||.+.+...                         +..+..
T Consensus        87 ~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~  163 (347)
T 1orr_A           87 TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHS  163 (347)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCC
Confidence            223456788999999999999999987653   2699999997543210                         123567


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH------------HHHH-hcCC-----Cc------ccccccC
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA------------AIEM-LTGG-----SA------DAKATSR  280 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~------------~~~~-~~~~-----~~------~~~~~~~  280 (406)
                      .|+.||++.+.+++.++.++   |+++++|.||++....            +... ....     ..      .....+.
T Consensus       164 ~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  240 (347)
T 1orr_A          164 PYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  240 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             chHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence            89999999999999999886   7999999998543221            1111 1110     00      0112355


Q ss_pred             ChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         281 KPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       281 ~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .++|+|+++++++.. +...+|+.+ +.+|
T Consensus       241 ~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~  269 (347)
T 1orr_A          241 HAEDMISLYFTALAN-VSKIRGNAFNIGGT  269 (347)
T ss_dssp             EHHHHHHHHHHHHHT-HHHHTTCEEEESSC
T ss_pred             EHHHHHHHHHHHHhc-cccCCCCEEEeCCC
Confidence            899999999999863 235678766 6554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=1.4e-20  Score=183.83  Aligned_cols=227  Identities=15%  Similarity=0.068  Sum_probs=151.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHH--cCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAK--DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~--~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ++++++++++||||+|+||++++++|++  +|++|++++|+...........+.........+.++.++.+|++++++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            3578999999999999999999999999  99999999997652100000000000001122446788999999999988


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++      ...++|+||||||...                                                        
T Consensus        85 ~~------~~~~~D~vih~A~~~~--------------------------------------------------------  102 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSD--------------------------------------------------------  102 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCG--------------------------------------------------------
T ss_pred             Hh------hccCCCEEEECCccCC--------------------------------------------------------
Confidence            76      3468999999999542                                                        


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------cCCchhhhHhhHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------FKNHVAYTISKYGM  233 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------~~~~~~Y~asKaal  233 (406)
                               .+.++++..+++|+.++.++++++    ++.+ ++||++||...+....        ..+...|+.||++.
T Consensus       103 ---------~~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~  168 (362)
T 3sxp_A          103 ---------TTMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCM  168 (362)
T ss_dssp             ---------GGCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHH
T ss_pred             ---------ccccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence                     234567889999999999999988    3333 5699999954432210        12345699999999


Q ss_pred             HHHHHHHHHhhcCCCeEE-EEecchhhh-------hHHHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcCCCC
Q psy6113         234 SMCALGMAEEFKGDNIAV-NALWPRTAI-------YTAAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~v-n~v~PG~~~-------~t~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~~~  298 (406)
                      +.+++.++.++.-..||. +.+.||...       ...+.........       .....+..++|+|+++++++...  
T Consensus       169 E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~--  246 (362)
T 3sxp_A          169 DEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ--  246 (362)
T ss_dssp             HHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS--
T ss_pred             HHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC--
Confidence            999999988755555666 555566211       1122222222111       11223557999999999999754  


Q ss_pred             CccceEEEehh
Q psy6113         299 SLTGQFLIDDE  309 (406)
Q Consensus       299 ~~tG~~i~d~g  309 (406)
                       .+|.+.+.+|
T Consensus       247 -~~g~~~i~~~  256 (362)
T 3sxp_A          247 -KSGVYNVGYS  256 (362)
T ss_dssp             -SCEEEEESCS
T ss_pred             -CCCEEEeCCC
Confidence             2573335443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.84  E-value=1.5e-20  Score=183.20  Aligned_cols=218  Identities=16%  Similarity=0.107  Sum_probs=155.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++||||+|+||++++++|+++ |++|++++|+......     .. ..++. .+.++.++.+|++|.+++.+++++   
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---   71 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL-----ES-LSDIS-ESNRYNFEHADICDSAEITRIFEQ---   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG-----GG-GTTTT-TCTTEEEEECCTTCHHHHHHHHHH---
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCch-----hh-hhhhh-cCCCeEEEECCCCCHHHHHHHHhh---
Confidence            4899999999999999999998 7999999987531110     00 01111 145688899999999999888875   


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                        +++|+||||||....                                                               
T Consensus        72 --~~~d~vih~A~~~~~---------------------------------------------------------------   86 (361)
T 1kew_A           72 --YQPDAVMHLAAESHV---------------------------------------------------------------   86 (361)
T ss_dssp             --HCCSEEEECCSCCCH---------------------------------------------------------------
T ss_pred             --cCCCEEEECCCCcCh---------------------------------------------------------------
Confidence              279999999996421                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-----CCeEEEeCCCCCCCCC-------------------ccCCchh
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-----HAHILNISPPLNLNPF-------------------WFKNHVA  225 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-----~g~Iv~vsS~~~~~~~-------------------~~~~~~~  225 (406)
                      +.+.++++..+++|+.+++++++++.+.|..-+     .++||++||...+...                   +..+...
T Consensus        87 ~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~  166 (361)
T 1kew_A           87 DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSP  166 (361)
T ss_dssp             HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCc
Confidence            233456788999999999999999999875421     3599999996532110                   1235678


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH---------HHHHHh-cCCC------cccccccCChhhHHHHH
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT---------AAIEML-TGGS------ADAKATSRKPEIMADAA  289 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~~-~~~~------~~~~~~~~~pe~vA~~v  289 (406)
                      |+.||++.+.+++.++.++   |+++++|.||.+...         .+.... ....      ......+..++|+|+++
T Consensus       167 Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  243 (361)
T 1kew_A          167 YSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARAL  243 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHH
Confidence            9999999999999999886   799999999853221         111111 1111      01123456799999999


Q ss_pred             HHhhcCCCCCccceEE-Eehh
Q psy6113         290 YYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       290 ~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++++++.   .+|+.+ +.+|
T Consensus       244 ~~~~~~~---~~g~~~~v~~~  261 (361)
T 1kew_A          244 HMVVTEG---KAGETYNIGGH  261 (361)
T ss_dssp             HHHHHHC---CTTCEEEECCC
T ss_pred             HHHHhCC---CCCCEEEecCC
Confidence            9999653   467655 5544

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.83  E-value=3e-20  Score=166.27  Aligned_cols=198  Identities=12%  Similarity=0.059  Sum_probs=140.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++++||||+|+||++++++|+++|++|++++|+.++....             ...++.++.+|++|++++.++++   
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~~~~~---   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------------GPRPAHVVVGDVLQAADVDKTVA---   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------------SCCCSEEEESCTTSHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------------cCCceEEEEecCCCHHHHHHHHc---
Confidence            47899999999999999999999999999999987654321             13467889999999998877654   


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          .+|++|||||....   .                                                          
T Consensus        67 ----~~d~vi~~a~~~~~---~----------------------------------------------------------   81 (206)
T 1hdo_A           67 ----GQDAVIVLLGTRND---L----------------------------------------------------------   81 (206)
T ss_dssp             ----TCSEEEECCCCTTC---C----------------------------------------------------------
T ss_pred             ----CCCEEEECccCCCC---C----------------------------------------------------------
Confidence                57999999996432   0                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc--CCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF--KNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~--~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                       +  +      .++|+.++..+++++    ++.+.++||++||.........  .....|+.+|++++.+.+       .
T Consensus        82 -~--~------~~~n~~~~~~~~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~-------~  141 (206)
T 1hdo_A           82 -S--P------TTVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR-------E  141 (206)
T ss_dssp             -S--C------CCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH-------H
T ss_pred             -C--c------cchHHHHHHHHHHHH----HHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHH-------h
Confidence             1  0      136777877777766    4455679999999865543210  056789999999998874       2


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCC-CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGG-SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~-~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .|++++.|.||++..+.....+... ...+...+.+++|+|+++++++.++  ..+|+.+ +++|
T Consensus       142 ~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~g  204 (206)
T 1hdo_A          142 SGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTD--EYDGHSTYPSHQ  204 (206)
T ss_dssp             TCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCS--TTTTCEEEEECC
T ss_pred             CCCCEEEEeCCcccCCCCCcceEecccCCCCCCccCHHHHHHHHHHHhcCc--cccccceeeecc
Confidence            5899999999964222111100000 0011135678999999999999763  3678877 6554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.83  E-value=8.6e-21  Score=175.20  Aligned_cols=215  Identities=16%  Similarity=0.126  Sum_probs=146.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++|+++||||+|+||++++++|+++  |++|++++|+.++           .   ...+.++.++.+|++|++++++++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~-----------~---~~~~~~~~~~~~D~~d~~~~~~~~   67 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG-----------K---EKIGGEADVFIGDITDADSINPAF   67 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH-----------H---HHTTCCTTEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc-----------h---hhcCCCeeEEEecCCCHHHHHHHH
Confidence            46789999999999999999999999  8999999997532           1   112456788999999999888776


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       ++|++|||||..........+.                                                  
T Consensus        68 ~-------~~d~vi~~a~~~~~~~~~~~~~--------------------------------------------------   90 (253)
T 1xq6_A           68 Q-------GIDALVILTSAVPKMKPGFDPT--------------------------------------------------   90 (253)
T ss_dssp             T-------TCSEEEECCCCCCEECTTCCTT--------------------------------------------------
T ss_pred             c-------CCCEEEEecccccccccccccc--------------------------------------------------
Confidence            4       5899999999764321100000                                                  


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCc-----hhhhHhhHHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNH-----VAYTISKYGMSMCALG  239 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~-----~~Y~asKaal~~l~~~  239 (406)
                      .....+...+++...+++|+.++..+++++.    +.+.++||++||..+..+.  .+.     ..|+.+|++++.+++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~--~~~~~~~~~~y~~sK~~~e~~~~~  164 (253)
T 1xq6_A           91 KGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPD--HPLNKLGNGNILVWKRKAEQYLAD  164 (253)
T ss_dssp             SSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTT--CGGGGGGGCCHHHHHHHHHHHHHT
T ss_pred             ccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCC--CccccccchhHHHHHHHHHHHHHh
Confidence            0000133445566788999999999888774    4456799999998876442  222     2466799999888753


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHH---HhcCCCcc---cccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIE---MLTGGSAD---AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~---~~~~~~~~---~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                             .||++++|+||++. ++...   ........   ...++..++|+|+++++++.+.  ..+|+.+ +.+
T Consensus       165 -------~~i~~~~vrpg~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~--~~~g~~~~i~~  230 (253)
T 1xq6_A          165 -------SGTPYTIIRAGGLL-DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE--EAKNKAFDLGS  230 (253)
T ss_dssp             -------SSSCEEEEEECEEE-CSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCG--GGTTEEEEEEE
T ss_pred             -------CCCceEEEecceee-cCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCc--cccCCEEEecC
Confidence                   68999999999643 32110   00000000   1123568999999999999753  2467666 444

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.83  E-value=1.4e-20  Score=170.93  Aligned_cols=190  Identities=18%  Similarity=0.250  Sum_probs=143.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~~i~~   89 (406)
                      +++||||+|+||++++++|+++|++|++++|+.++....               .++.++.+|++| +++++++++    
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------------~~~~~~~~D~~d~~~~~~~~~~----   62 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------------NNVKAVHFDVDWTPEEMAKQLH----   62 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------------TTEEEEECCTTSCHHHHHTTTT----
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------------CCceEEEecccCCHHHHHHHHc----
Confidence            589999999999999999999999999999998765431               468899999999 887766553    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|+||||||....                                                               
T Consensus        63 ---~~d~vi~~ag~~~~---------------------------------------------------------------   76 (219)
T 3dqp_A           63 ---GMDAIINVSGSGGK---------------------------------------------------------------   76 (219)
T ss_dssp             ---TCSEEEECCCCTTS---------------------------------------------------------------
T ss_pred             ---CCCEEEECCcCCCC---------------------------------------------------------------
Confidence               69999999996421                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCC-------chhhhHhhHHHHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKN-------HVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~-------~~~Y~asKaal~~l~~~la~  242 (406)
                              ..+++|+.++..+++++    ++.+.++||++||..+..+.  +.       ...|+.+|++.+.+.+    
T Consensus        77 --------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~--~~~e~~~~~~~~Y~~sK~~~e~~~~----  138 (219)
T 3dqp_A           77 --------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPE--KWIGAGFDALKDYYIAKHFADLYLT----  138 (219)
T ss_dssp             --------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGG--GCCSHHHHHTHHHHHHHHHHHHHHH----
T ss_pred             --------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCC--cccccccccccHHHHHHHHHHHHHH----
Confidence                    15678999999988877    55566799999998877653  33       6789999999998876    


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                        ...|++++.|.||++........+..  ......+..++|+|+++++++.++  ...|+.+ +.+|
T Consensus       139 --~~~~i~~~ilrp~~v~g~~~~~~~~~--~~~~~~~i~~~Dva~~i~~~l~~~--~~~g~~~~i~~g  200 (219)
T 3dqp_A          139 --KETNLDYTIIQPGALTEEEATGLIDI--NDEVSASNTIGDVADTIKELVMTD--HSIGKVISMHNG  200 (219)
T ss_dssp             --HSCCCEEEEEEECSEECSCCCSEEEE--SSSCCCCEEHHHHHHHHHHHHTCG--GGTTEEEEEEEC
T ss_pred             --hccCCcEEEEeCceEecCCCCCcccc--CCCcCCcccHHHHHHHHHHHHhCc--cccCcEEEeCCC
Confidence              36789999999996433210000000  012234568999999999999763  2447666 5554

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.82  E-value=4.8e-20  Score=172.46  Aligned_cols=183  Identities=15%  Similarity=0.079  Sum_probs=141.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||+|+||++++++|+++|++|++++|+..+..                ...+.++.+|++|++++.++++    
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------~~~~~~~~~Dl~d~~~~~~~~~----   62 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------------EAHEEIVACDLADAQAVHDLVK----   62 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------------CTTEEECCCCTTCHHHHHHHHT----
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------------CCCccEEEccCCCHHHHHHHHc----
Confidence            68999999999999999999999999999999876421                0246788999999998877765    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|+||||||...                                                                
T Consensus        63 ---~~d~vi~~a~~~~----------------------------------------------------------------   75 (267)
T 3ay3_A           63 ---DCDGIIHLGGVSV----------------------------------------------------------------   75 (267)
T ss_dssp             ---TCSEEEECCSCCS----------------------------------------------------------------
T ss_pred             ---CCCEEEECCcCCC----------------------------------------------------------------
Confidence               5899999999641                                                                


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------cCCchhhhHhhHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------FKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------~~~~~~Y~asKaal~~l~~~  239 (406)
                         .+++...+++|+.++.++++++.+    .+.++||++||...+....          ..+...|+.||++++.+++.
T Consensus        76 ---~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  148 (267)
T 3ay3_A           76 ---ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASL  148 (267)
T ss_dssp             ---CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence               123677899999999999998853    4557999999986653311          01347899999999999998


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++.+   +||++++|.||++..+       +........+..++|+|++++.++...
T Consensus       149 ~~~~---~gi~~~~lrp~~v~~~-------~~~~~~~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          149 YYHK---FDIETLNIRIGSCFPK-------PKDARMMATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHT---TCCCEEEEEECBCSSS-------CCSHHHHHHBCCHHHHHHHHHHHHHSS
T ss_pred             HHHH---cCCCEEEEeceeecCC-------CCCCCeeeccccHHHHHHHHHHHHhCC
Confidence            8654   5899999999964322       111122345689999999999998653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.82  E-value=1.2e-19  Score=176.60  Aligned_cols=223  Identities=15%  Similarity=0.064  Sum_probs=155.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++++++++||||+|+||++++++|+++|++|++++|+.....   +.+....+++.. .+.++.++.+|++|.+++.+++
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~  100 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQ---RNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC  100 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH---HHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccch---hhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence            467899999999999999999999999999999999765311   111111111111 1246888999999999887776


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       ++|+||||||....                                                          
T Consensus       101 ~-------~~d~vih~A~~~~~----------------------------------------------------------  115 (352)
T 1sb8_A          101 A-------GVDYVLHQAALGSV----------------------------------------------------------  115 (352)
T ss_dssp             T-------TCSEEEECCSCCCH----------------------------------------------------------
T ss_pred             c-------CCCEEEECCcccCc----------------------------------------------------------
Confidence            5       79999999996421                                                          


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSM  235 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~  235 (406)
                           ..+.+++...+++|+.++..+++++.+    .+.++||++||...+.+..         ..+...|+.||++.+.
T Consensus       116 -----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  186 (352)
T 1sb8_A          116 -----PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNEL  186 (352)
T ss_dssp             -----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHH
T ss_pred             -----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence                 113456788999999999999998854    3557999999976653321         0135689999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhHH-------------HHHHh-cCCCc------ccccccCChhhHHHHHHHhhcC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYTA-------------AIEML-TGGSA------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t~-------------~~~~~-~~~~~------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +++.++.++   |++++.|.||++....             +.... .....      .....+..++|+|+++++++..
T Consensus       187 ~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          187 YADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  263 (352)
T ss_dssp             HHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence            999999886   7999999997532211             11111 11110      1112456799999999998865


Q ss_pred             CCCCccceEE-Eehh
Q psy6113         296 NPPSLTGQFL-IDDE  309 (406)
Q Consensus       296 ~~~~~tG~~i-~d~g  309 (406)
                      . ....|+.+ +.+|
T Consensus       264 ~-~~~~~~~~ni~~~  277 (352)
T 1sb8_A          264 G-LDARNQVYNIAVG  277 (352)
T ss_dssp             C-GGGCSEEEEESCS
T ss_pred             c-ccCCCceEEeCCC
Confidence            2 23456555 5443

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.81  E-value=6e-19  Score=170.69  Aligned_cols=208  Identities=14%  Similarity=0.122  Sum_probs=151.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcC-------CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDG-------ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE   77 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~G-------a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~   77 (406)
                      ..|++++++||||+|+||++++++|+++|       ++|++++|+.+....             ..+.++.++.+|++|+
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------------~~~~~~~~~~~Dl~d~   76 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------------GFSGAVDARAADLSAP   76 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------------TCCSEEEEEECCTTST
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------------ccCCceeEEEcCCCCH
Confidence            35789999999999999999999999999       899999998754321             1245788899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      ++++++++      +++|+||||||...                                                    
T Consensus        77 ~~~~~~~~------~~~d~vih~A~~~~----------------------------------------------------   98 (342)
T 2hrz_A           77 GEAEKLVE------ARPDVIFHLAAIVS----------------------------------------------------   98 (342)
T ss_dssp             THHHHHHH------TCCSEEEECCCCCH----------------------------------------------------
T ss_pred             HHHHHHHh------cCCCEEEECCccCc----------------------------------------------------
Confidence            99887765      47999999999642                                                    


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCc---------cCCchhhh
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFW---------FKNHVAYT  227 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~  227 (406)
                                  ..+.+++...+++|+.++.++++++.+...++ +.++||++||...+.+..         ..+...|+
T Consensus        99 ------------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~  166 (342)
T 2hrz_A           99 ------------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYG  166 (342)
T ss_dssp             ------------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHH
T ss_pred             ------------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHH
Confidence                        12345688899999999999999987754332 247999999986654320         01467899


Q ss_pred             HhhHHHHHHHHHHHHhh--cCCCeEEEEec--chhhh------hHHHHHHhcCCCc-------ccccccCChhhHHHHHH
Q psy6113         228 ISKYGMSMCALGMAEEF--KGDNIAVNALW--PRTAI------YTAAIEMLTGGSA-------DAKATSRKPEIMADAAY  290 (406)
Q Consensus       228 asKaal~~l~~~la~e~--~~~gI~vn~v~--PG~~~------~t~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~  290 (406)
                      .||++.+.+++.++.++  ....||++.|.  ||.+.      ...+.........       .....+..++|+|++++
T Consensus       167 ~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~  246 (342)
T 2hrz_A          167 TQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLI  246 (342)
T ss_dssp             HHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHH
Confidence            99999999999988764  23457888887  87421      1112222111110       01112457999999999


Q ss_pred             HhhcC
Q psy6113         291 YILSS  295 (406)
Q Consensus       291 ~L~s~  295 (406)
                      +++..
T Consensus       247 ~~~~~  251 (342)
T 2hrz_A          247 HGAMI  251 (342)
T ss_dssp             HHHHS
T ss_pred             HHHhc
Confidence            98854

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.81  E-value=8.7e-19  Score=169.90  Aligned_cols=159  Identities=12%  Similarity=0.051  Sum_probs=124.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.++++|+++||||+|+||++++++|+++|++|++++|+.+.                   .++.++.+|++|.+++.++
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------~~~~~~~~Dl~d~~~~~~~   74 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------TGGEEVVGSLEDGQALSDA   74 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------SCCSEEESCTTCHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------CCccEEecCcCCHHHHHHH
Confidence            567889999999999999999999999999999999998753                   3477889999999988876


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++       ++|++||+|+..                                                           
T Consensus        75 ~~-------~~d~vih~A~~~-----------------------------------------------------------   88 (347)
T 4id9_A           75 IM-------GVSAVLHLGAFM-----------------------------------------------------------   88 (347)
T ss_dssp             HT-------TCSEEEECCCCC-----------------------------------------------------------
T ss_pred             Hh-------CCCEEEECCccc-----------------------------------------------------------
Confidence            65       789999999964                                                           


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------ccCCchhhhHhhHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------WFKNHVAYTISKYG  232 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------~~~~~~~Y~asKaa  232 (406)
                            ..+...++..+++|+.++..+++++.    +.+.++||++||...+...           +......|+.||.+
T Consensus        89 ------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~  158 (347)
T 4id9_A           89 ------SWAPADRDRMFAVNVEGTRRLLDAAS----AAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLL  158 (347)
T ss_dssp             ------CSSGGGHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             ------CcchhhHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHH
Confidence                  33344568899999999999999874    4556799999996543220           12346789999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhhh
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTAI  260 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~~  260 (406)
                      .+.+++.++.+.   |++++.+.|+++.
T Consensus       159 ~E~~~~~~~~~~---~~~~~ilRp~~v~  183 (347)
T 4id9_A          159 GEELVRFHQRSG---AMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred             HHHHHHHHHHhc---CCceEEEccceEe
Confidence            999999998874   7999999998543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.80  E-value=2.7e-19  Score=173.41  Aligned_cols=211  Identities=15%  Similarity=0.171  Sum_probs=149.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++||||+|+||++++++|+++  |++|++++|+......      +...++  .+.++.++.+|++|++++.++++  
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~------~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK------ANLEAI--LGDRVELVVGDIADAELVDKLAA--   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG------GGTGGG--CSSSEEEEECCTTCHHHHHHHHT--
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh------hHHhhh--ccCCeEEEECCCCCHHHHHHHhh--
Confidence            67999999999999999999999  8999999997542111      001111  13568889999999988877665  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           .+|+||||||....                                                             
T Consensus        75 -----~~d~vih~A~~~~~-------------------------------------------------------------   88 (348)
T 1oc2_A           75 -----KADAIVHYAAESHN-------------------------------------------------------------   88 (348)
T ss_dssp             -----TCSEEEECCSCCCH-------------------------------------------------------------
T ss_pred             -----cCCEEEECCcccCc-------------------------------------------------------------
Confidence                 35999999996421                                                             


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------------------ccCCchhh
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------------------WFKNHVAY  226 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------------------~~~~~~~Y  226 (406)
                        +.+.++++..+++|+.++.++++++.+.    + ++||++||...+...                     +..+...|
T Consensus        89 --~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y  161 (348)
T 1oc2_A           89 --DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  161 (348)
T ss_dssp             --HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             --cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCcc
Confidence              2234567789999999999999999765    3 499999997533210                     12345789


Q ss_pred             hHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH---------HHHHH-hcCCC------cccccccCChhhHHHHHH
Q psy6113         227 TISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT---------AAIEM-LTGGS------ADAKATSRKPEIMADAAY  290 (406)
Q Consensus       227 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~-~~~~~------~~~~~~~~~pe~vA~~v~  290 (406)
                      +.||++.+.+++.++.++   |++++.|.||.+...         .+... .....      ......+..++|+|++++
T Consensus       162 ~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  238 (348)
T 1oc2_A          162 SSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW  238 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHH
Confidence            999999999999999886   799999999853211         11111 11111      112234567999999999


Q ss_pred             HhhcCCCCCccceEE-Eehh
Q psy6113         291 YILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       291 ~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +++.+.   .+|+.+ +.+|
T Consensus       239 ~~~~~~---~~g~~~~i~~~  255 (348)
T 1oc2_A          239 AILTKG---RMGETYLIGAD  255 (348)
T ss_dssp             HHHHHC---CTTCEEEECCS
T ss_pred             HHhhCC---CCCCeEEeCCC
Confidence            998643   367655 5544

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.80  E-value=1e-18  Score=169.37  Aligned_cols=175  Identities=14%  Similarity=0.076  Sum_probs=129.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|+++||||+|+||++++++|+++|++|++++|+........ ...+..+++.. .+.++.++.+|+++.++++++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGG-SLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSS-SSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCccccccc-ccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            578999999999999999999999999999998754310000 00012233332 3557888999999999988887652


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|+||||||....                                                             
T Consensus        81 -----~~d~vih~A~~~~~-------------------------------------------------------------   94 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAV-------------------------------------------------------------   94 (348)
T ss_dssp             -----CEEEEEECCSCCCH-------------------------------------------------------------
T ss_pred             -----CCCEEEECCCCcCc-------------------------------------------------------------
Confidence                 79999999996421                                                             


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------c-cCCchhhhHhhHHHHHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------W-FKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~-~~~~~~Y~asKaal~~l~  237 (406)
                        ..+.+++...+++|+.++.++++++    ++.+.++||++||...+...         + .+....|+.||++.+.++
T Consensus        95 --~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~  168 (348)
T 1ek6_A           95 --GESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMI  168 (348)
T ss_dssp             --HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             --cchhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHH
Confidence              1123557788999999999998875    44556799999997654210         0 122678999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchh
Q psy6113         238 LGMAEEFKGDNIAVNALWPRT  258 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~  258 (406)
                      +.++.+  ..++++..+.|+.
T Consensus       169 ~~~~~~--~~~~~~~~lR~~~  187 (348)
T 1ek6_A          169 RDLCQA--DKTWNAVLLRYFN  187 (348)
T ss_dssp             HHHHHH--CTTCEEEEEEECE
T ss_pred             HHHHhc--CCCcceEEEeecc
Confidence            999987  3468888888753

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.80  E-value=2.2e-19  Score=171.53  Aligned_cols=197  Identities=15%  Similarity=0.101  Sum_probs=141.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|+||++++++|+++|++|++++|......+             ....++.++.+|++|+++++++++..   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------------~~~~~~~~~~~Dl~~~~~~~~~~~~~---   65 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-------------NVPKGVPFFRVDLRDKEGVERAFREF---   65 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-------------GSCTTCCEECCCTTCHHHHHHHHHHH---
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-------------hcccCeEEEECCCCCHHHHHHHHHhc---
Confidence            58999999999999999999999999999885432110             01134677889999999998887642   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||+||....                                                               .
T Consensus        66 --~~d~vi~~a~~~~~---------------------------------------------------------------~   80 (311)
T 2p5y_A           66 --RPTHVSHQAAQASV---------------------------------------------------------------K   80 (311)
T ss_dssp             --CCSEEEECCSCCCH---------------------------------------------------------------H
T ss_pred             --CCCEEEECccccCc---------------------------------------------------------------h
Confidence              68999999996421                                                               2


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCC-CCCC------CC----ccCCchhhhHhhHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP-LNLN------PF----WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~-~~~~------~~----~~~~~~~Y~asKaal~~l~~~  239 (406)
                      .+.+++...+++|+.+++++++++.    +.+.++||++||. ..+.      +.    +..+...|+.||++++.+++.
T Consensus        81 ~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  156 (311)
T 2p5y_A           81 VSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSV  156 (311)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            2345678899999999999999874    4445799999997 2110      10    012456899999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhH------------HHHHHh-cCCC-----------cccccccCChhhHHHHHHHhhcC
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYT------------AAIEML-TGGS-----------ADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t------------~~~~~~-~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++.++   |++++.|.|+.+...            .+.+.. ....           ......+..++|+|+++++++..
T Consensus       157 ~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  233 (311)
T 2p5y_A          157 YGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS  233 (311)
T ss_dssp             HHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence            98875   799999999743211            111111 1111           01122345789999999999865

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.80  E-value=2e-18  Score=169.63  Aligned_cols=217  Identities=13%  Similarity=0.089  Sum_probs=148.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC-eeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG-NCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||+|+||++++++|+++|++|++++|+.+....  +.+..........+. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNT--QRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--TTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccc--hhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998764210  001111111112233 6888999999999999888765 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|+||||||....                                                              
T Consensus       106 ----~~d~Vih~A~~~~~--------------------------------------------------------------  119 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHV--------------------------------------------------------------  119 (381)
T ss_dssp             ----CCSEEEECCSCCCH--------------------------------------------------------------
T ss_pred             ----CCCEEEECCcccCc--------------------------------------------------------------
Confidence                78999999996421                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCC--------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPF--------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~--------~~~~~~~Y~asKaal~~l~~~  239 (406)
                       ..+.+++...+++|+.++..+++++.+...++ +.++||++||...+...        +..+...|+.||++.+.+++.
T Consensus       120 -~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  198 (381)
T 1n7h_A          120 -AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVN  198 (381)
T ss_dssp             -HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence             22345678899999999999999999987653 34699999997643211        123467899999999999999


Q ss_pred             HHHhhcC---CCeEEEEecchhhhh---H---HHHHH-hcCCC-------cccccccCChhhHHHHHHHhhcCC
Q psy6113         240 MAEEFKG---DNIAVNALWPRTAIY---T---AAIEM-LTGGS-------ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       240 la~e~~~---~gI~vn~v~PG~~~~---t---~~~~~-~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++.+++-   ..+.+|.+.||....   .   .+... .....       ......+..++|+|+++++++...
T Consensus       199 ~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  272 (381)
T 1n7h_A          199 YREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  272 (381)
T ss_dssp             HHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence            9988642   122345566752111   1   11111 11111       012234668999999999999753

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.79  E-value=2.2e-19  Score=172.08  Aligned_cols=213  Identities=15%  Similarity=0.149  Sum_probs=137.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEec-CCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAK-TAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r-~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ||+++||||+|+||++++++|+++|++|+++.| +.+...+.    .. ...+...+.++.++.+|++|+++++++++  
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV----SF-LTNLPGASEKLHFFNADLSNPDSFAAAIE--   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC----HH-HHTSTTHHHHEEECCCCTTCGGGGHHHHT--
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH----HH-HHhhhccCCceEEEecCCCCHHHHHHHHc--
Confidence            689999999999999999999999999999888 54332221    00 01111011257788899999998877765  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           .+|+|||||+..   ..                                                          
T Consensus        74 -----~~d~vih~A~~~---~~----------------------------------------------------------   87 (322)
T 2p4h_X           74 -----GCVGIFHTASPI---DF----------------------------------------------------------   87 (322)
T ss_dssp             -----TCSEEEECCCCC---------------------------------------------------------------
T ss_pred             -----CCCEEEEcCCcc---cC----------------------------------------------------------
Confidence                 579999999632   10                                                          


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc--------------------CCchhhh
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF--------------------KNHVAYT  227 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~--------------------~~~~~Y~  227 (406)
                         ...+.++.++++|+.|++++++++.+..   +.++||++||..+..+...                    +....|+
T Consensus        88 ---~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           88 ---AVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence               0111135688999999999999986541   3479999999875432110                    0011699


Q ss_pred             HhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH-------HHHH----hcCCCc---ccccccCChhhHHHHHHHhh
Q psy6113         228 ISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA-------AIEM----LTGGSA---DAKATSRKPEIMADAAYYIL  293 (406)
Q Consensus       228 asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~-------~~~~----~~~~~~---~~~~~~~~pe~vA~~v~~L~  293 (406)
                      .||++.+.+++.++.+   +||++++|.||++....       ....    ......   .....+..++|+|+++++++
T Consensus       162 ~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHh
Confidence            9999877776655543   58999999998532210       0100    111100   00113678999999999998


Q ss_pred             cCCCCCccceEE
Q psy6113         294 SSNPPSLTGQFL  305 (406)
Q Consensus       294 s~~~~~~tG~~i  305 (406)
                      ...  ..+|+++
T Consensus       239 ~~~--~~~g~~~  248 (322)
T 2p4h_X          239 ENS--VPGGRYN  248 (322)
T ss_dssp             HSC--CCCEEEE
T ss_pred             hCc--CCCCCEE
Confidence            652  2567755

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.79  E-value=2.1e-18  Score=169.75  Aligned_cols=202  Identities=14%  Similarity=0.046  Sum_probs=147.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..++++++||||+|+||++++++|+++|++|++++|+.......             ...++.++.+|++|.+++.++++
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~v~~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------DMFCDEFHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------GGTCSEEEECCTTSHHHHHHHHT
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------------ccCCceEEECCCCCHHHHHHHhC
Confidence            34678999999999999999999999999999999987654321             12357788999999998887764


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                             ++|++|||||.....                                                          
T Consensus        93 -------~~d~Vih~A~~~~~~----------------------------------------------------------  107 (379)
T 2c5a_A           93 -------GVDHVFNLAADMGGM----------------------------------------------------------  107 (379)
T ss_dssp             -------TCSEEEECCCCCCCH----------------------------------------------------------
T ss_pred             -------CCCEEEECceecCcc----------------------------------------------------------
Confidence                   689999999964211                                                          


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------------ccCCchhhhHh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------------WFKNHVAYTIS  229 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------------~~~~~~~Y~as  229 (406)
                          ....+++...+++|+.++.++++++.    +.+.++||++||...+...                +..+...|+.|
T Consensus       108 ----~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~s  179 (379)
T 2c5a_A          108 ----GFIQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE  179 (379)
T ss_dssp             ----HHHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred             ----cccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHH
Confidence                11134577889999999999999884    3455799999997654321                12345689999


Q ss_pred             hHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH-------------HHHHHh-cCCC-------cccccccCChhhHHHH
Q psy6113         230 KYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT-------------AAIEML-TGGS-------ADAKATSRKPEIMADA  288 (406)
Q Consensus       230 Kaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t-------------~~~~~~-~~~~-------~~~~~~~~~pe~vA~~  288 (406)
                      |++.+.+++.++.++   |++++.|.||++...             .+.... ....       ......+..++|+|++
T Consensus       180 K~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  256 (379)
T 2c5a_A          180 KLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG  256 (379)
T ss_dssp             HHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence            999999999998875   799999999854321             122221 1111       0112245579999999


Q ss_pred             HHHhhcCC
Q psy6113         289 AYYILSSN  296 (406)
Q Consensus       289 v~~L~s~~  296 (406)
                      +++++...
T Consensus       257 i~~~l~~~  264 (379)
T 2c5a_A          257 VLRLTKSD  264 (379)
T ss_dssp             HHHHHHSS
T ss_pred             HHHHhhcc
Confidence            99998753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.79  E-value=2.5e-18  Score=166.09  Aligned_cols=213  Identities=18%  Similarity=0.094  Sum_probs=142.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ...+++++++||||+|+||++++++|+++|++|++++|+.....+.          +... .++.++.+|++|+++++++
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------l~~~-~~~~~~~~Dl~d~~~~~~~   84 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH----------LKDH-PNLTFVEGSIADHALVNQL   84 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG----------SCCC-TTEEEEECCTTCHHHHHHH
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh----------Hhhc-CCceEEEEeCCCHHHHHHH
Confidence            3467889999999999999999999999999999999986532110          0000 3578899999999999888


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.     +++|+||||||....                                                         
T Consensus        85 ~~~-----~~~D~vih~A~~~~~---------------------------------------------------------  102 (333)
T 2q1w_A           85 IGD-----LQPDAVVHTAASYKD---------------------------------------------------------  102 (333)
T ss_dssp             HHH-----HCCSEEEECCCCCSC---------------------------------------------------------
T ss_pred             Hhc-----cCCcEEEECceecCC---------------------------------------------------------
Confidence            775     379999999996532                                                         


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCC----CCcc------CCc-hhhhHhhHH
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLN----PFWF------KNH-VAYTISKYG  232 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~----~~~~------~~~-~~Y~asKaa  232 (406)
                            . +.++++  +++|+.++..+++++.+    .+.++||++||...+.    ....      .+. ..|+.||++
T Consensus       103 ------~-~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~  169 (333)
T 2q1w_A          103 ------P-DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSA  169 (333)
T ss_dssp             ------T-TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHH
T ss_pred             ------C-ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHH
Confidence                  1 223344  89999999999999865    3457999999976543    1100      123 789999999


Q ss_pred             HHHHHHH-HHHhhcCCCeEE-EEecchh--hhhHHHHHHhcCCC----cccccccCChhhHHHHHHHhhcCCCCCccceE
Q psy6113         233 MSMCALG-MAEEFKGDNIAV-NALWPRT--AIYTAAIEMLTGGS----ADAKATSRKPEIMADAAYYILSSNPPSLTGQF  304 (406)
Q Consensus       233 l~~l~~~-la~e~~~~gI~v-n~v~PG~--~~~t~~~~~~~~~~----~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~  304 (406)
                      .+.+++. ++ ++  ..+|. +.+.|+.  ...+.+.+......    ......+..++|+|++++++++...    |+.
T Consensus       170 ~E~~~~~s~~-~~--~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----g~~  242 (333)
T 2q1w_A          170 NEDYLEYSGL-DF--VTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG----HGA  242 (333)
T ss_dssp             HHHHHHHHTC-CE--EEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC----CEE
T ss_pred             HHHHHHhhhC-Ce--EEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC----CCE
Confidence            9999988 65 21  23444 4445541  01112222221111    1123345689999999999997643    555


Q ss_pred             E-Eehh
Q psy6113         305 L-IDDE  309 (406)
Q Consensus       305 i-~d~g  309 (406)
                      + +.+|
T Consensus       243 ~~v~~~  248 (333)
T 2q1w_A          243 YHFSSG  248 (333)
T ss_dssp             EECSCS
T ss_pred             EEeCCC
Confidence            5 4443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.79  E-value=2.2e-19  Score=171.36  Aligned_cols=204  Identities=13%  Similarity=0.096  Sum_probs=146.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++||||+|+||++++++|+++|++|++++|+.+...+.             ....+.++.+|++|.+ +.++++    
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~~~Dl~d~~-~~~~~~----   62 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------------VNPSAELHVRDLKDYS-WGAGIK----   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------------SCTTSEEECCCTTSTT-TTTTCC----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------------cCCCceEEECccccHH-HHhhcC----
Confidence            4699999999999999999999999999999987653321             1346788899999987 554432    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         . |++|||||....                                                               
T Consensus        63 ---~-d~vih~A~~~~~---------------------------------------------------------------   75 (312)
T 3ko8_A           63 ---G-DVVFHFAANPEV---------------------------------------------------------------   75 (312)
T ss_dssp             ---C-SEEEECCSSCSS---------------------------------------------------------------
T ss_pred             ---C-CEEEECCCCCCc---------------------------------------------------------------
Confidence               3 999999995321                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~l  240 (406)
                      ..+.+++...+++|+.++.++++++    ++.+.++||++||...+...         +..+...|+.||++.+.+++.+
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~  151 (312)
T 3ko8_A           76 RLSTTEPIVHFNENVVATFNVLEWA----RQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATY  151 (312)
T ss_dssp             SGGGSCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            4455677889999999999999988    44456799999997654221         1234678999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhH--------HHHHHh-cCCCc-------ccccccCChhhHHHHHHHhhcC-CCCCccce
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYT--------AAIEML-TGGSA-------DAKATSRKPEIMADAAYYILSS-NPPSLTGQ  303 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t--------~~~~~~-~~~~~-------~~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~  303 (406)
                      +.++   |++++.+.||++...        .+.... .....       .....+..++|+|+++++++.. ......|+
T Consensus       152 ~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  228 (312)
T 3ko8_A          152 ARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFL  228 (312)
T ss_dssp             HHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEE
T ss_pred             HHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCc
Confidence            9987   799999999754322        111111 11110       1112345699999999999864 11234455


Q ss_pred             EE
Q psy6113         304 FL  305 (406)
Q Consensus       304 ~i  305 (406)
                      .+
T Consensus       229 ~~  230 (312)
T 3ko8_A          229 AL  230 (312)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.79  E-value=1.4e-18  Score=167.90  Aligned_cols=204  Identities=13%  Similarity=0.156  Sum_probs=141.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      .+++||||+|+||++++++|+++|++|++++|+..+.+.           +..  .++.++.+|++|.+++.++++    
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------l~~--~~~~~~~~Dl~d~~~~~~~~~----   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-----------LAY--LEPECRVAEMLDHAGLERALR----   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-----------GGG--GCCEEEECCTTCHHHHHHHTT----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-----------hcc--CCeEEEEecCCCHHHHHHHHc----
Confidence            379999999999999999999999999999998765321           111  257788999999988877654    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|++||+||...                                                                
T Consensus        77 ---~~d~vih~a~~~~----------------------------------------------------------------   89 (342)
T 2x4g_A           77 ---GLDGVIFSAGYYP----------------------------------------------------------------   89 (342)
T ss_dssp             ---TCSEEEEC---------------------------------------------------------------------
T ss_pred             ---CCCEEEECCccCc----------------------------------------------------------------
Confidence               6899999999542                                                                


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc----------CC----chhhhHhhHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF----------KN----HVAYTISKYGMSM  235 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~----------~~----~~~Y~asKaal~~  235 (406)
                       .+.+++...+++|+.++.++++++.+.    +.++||++||...+.+...          ..    ...|+.+|++.+.
T Consensus        90 -~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~  164 (342)
T 2x4g_A           90 -SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDE  164 (342)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHH
Confidence             123456778899999999999998653    4579999999876543210          01    6789999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhH--------HHHHHhcCCCcc----cccccCChhhHHHHHHHhhcCCCCCccce
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYT--------AAIEMLTGGSAD----AKATSRKPEIMADAAYYILSSNPPSLTGQ  303 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t--------~~~~~~~~~~~~----~~~~~~~pe~vA~~v~~L~s~~~~~~tG~  303 (406)
                      +++.++.   + |++++.|.||++...        .+..........    ....+..++|+|+++++++.....   |+
T Consensus       165 ~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~---g~  237 (342)
T 2x4g_A          165 QAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI---GE  237 (342)
T ss_dssp             HHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT---TC
T ss_pred             HHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC---Cc
Confidence            9999886   3 799999999854321        111222111111    112356899999999999875332   55


Q ss_pred             EE-Eehh
Q psy6113         304 FL-IDDE  309 (406)
Q Consensus       304 ~i-~d~g  309 (406)
                      .+ +.++
T Consensus       238 ~~~v~~~  244 (342)
T 2x4g_A          238 RYLLTGH  244 (342)
T ss_dssp             EEEECCE
T ss_pred             eEEEcCC
Confidence            44 4443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.79  E-value=2.6e-18  Score=166.77  Aligned_cols=219  Identities=15%  Similarity=0.069  Sum_probs=155.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC-----CeeeeeeecCCChHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-----GNCLPCIVDIRDEHA   79 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g-----~~~~~~~~Dl~~~~~   79 (406)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.....       .....+....     .++.++.+|++|.++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   93 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQ-------YNLDEVKTLVSTEQWSRFCFIEGDIRDLTT   93 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH-------HHHHHHHHTSCHHHHTTEEEEECCTTCHHH
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCch-------hhhhhhhhccccccCCceEEEEccCCCHHH
Confidence            4567899999999999999999999999999999999876432       1223333221     568899999999998


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      +.++++       ++|++||+||....                                                     
T Consensus        94 ~~~~~~-------~~d~Vih~A~~~~~-----------------------------------------------------  113 (351)
T 3ruf_A           94 CEQVMK-------GVDHVLHQAALGSV-----------------------------------------------------  113 (351)
T ss_dssp             HHHHTT-------TCSEEEECCCCCCH-----------------------------------------------------
T ss_pred             HHHHhc-------CCCEEEECCccCCc-----------------------------------------------------
Confidence            877665       79999999996422                                                     


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhh
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISK  230 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asK  230 (406)
                                ..+.+++...+++|+.++..+++++.    +.+.++||++||...+....         ......|+.+|
T Consensus       114 ----------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  179 (351)
T 3ruf_A          114 ----------PRSIVDPITTNATNITGFLNILHAAK----NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTK  179 (351)
T ss_dssp             ----------HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHH
T ss_pred             ----------chhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHH
Confidence                      22345577889999999999999874    44557999999976543211         02346899999


Q ss_pred             HHHHHHHHHHHHhhcCCCeEEEEecchhhhhH-------------HHHHH-hcCCCc------ccccccCChhhHHHHHH
Q psy6113         231 YGMSMCALGMAEEFKGDNIAVNALWPRTAIYT-------------AAIEM-LTGGSA------DAKATSRKPEIMADAAY  290 (406)
Q Consensus       231 aal~~l~~~la~e~~~~gI~vn~v~PG~~~~t-------------~~~~~-~~~~~~------~~~~~~~~pe~vA~~v~  290 (406)
                      .+.+.+++.++.++   |++++.+.|+.+...             .+... ......      .....+...+|+|++++
T Consensus       180 ~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~  256 (351)
T 3ruf_A          180 YVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNI  256 (351)
T ss_dssp             HHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHH
Confidence            99999999998876   788999988743221             11111 111111      11223457899999999


Q ss_pred             HhhcCCCCCccceEE-Eeh
Q psy6113         291 YILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       291 ~L~s~~~~~~tG~~i-~d~  308 (406)
                      .++... ....|+.+ +.+
T Consensus       257 ~~~~~~-~~~~~~~~ni~~  274 (351)
T 3ruf_A          257 LSALAK-DSAKDNIYNVAV  274 (351)
T ss_dssp             HHHTCC-GGGCSEEEEESC
T ss_pred             HHHhhc-cccCCCEEEeCC
Confidence            988652 23455555 443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.79  E-value=1.3e-18  Score=158.51  Aligned_cols=197  Identities=14%  Similarity=-0.001  Sum_probs=142.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++||||+|+||++++++|+++|++|++++|+.++...+              ..++.++.+|++|.++++++++    
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~----   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------------NEHLKVKKADVSSLDEVCEVCK----   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------------CTTEEEECCCTTCHHHHHHHHT----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------------cCceEEEEecCCCHHHHHHHhc----
Confidence            6799999999999999999999999999999998765432              2468899999999999887765    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|++|||||....                                                               
T Consensus        67 ---~~d~vi~~a~~~~~---------------------------------------------------------------   80 (227)
T 3dhn_A           67 ---GADAVISAFNPGWN---------------------------------------------------------------   80 (227)
T ss_dssp             ---TCSEEEECCCC------------------------------------------------------------------
T ss_pred             ---CCCEEEEeCcCCCC---------------------------------------------------------------
Confidence               58999999985311                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------cCCchhhhHhhHHHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------FKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------~~~~~~Y~asKaal~~l~~~la  241 (406)
                      +      ...+++|+.++..+++++    ++.+.++||++||.....+..        ......|+.+|++.+.+.+.++
T Consensus        81 ~------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  150 (227)
T 3dhn_A           81 N------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLM  150 (227)
T ss_dssp             ---------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGG
T ss_pred             C------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence            0      115778999988888876    444557999999987654321        1235789999999999888887


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHH-HHhc-CCC----cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAI-EMLT-GGS----ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~-~~~~-~~~----~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      .+   .|++++.+.||++...... ..+. ...    ......+..++|+|+++++++..+  ...|+.+
T Consensus       151 ~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~--~~~g~~~  215 (227)
T 3dhn_A          151 KE---KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHP--KHHQERF  215 (227)
T ss_dssp             GC---CSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSC--CCCSEEE
T ss_pred             hc---cCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCc--cccCcEE
Confidence            64   4899999999964322100 0000 000    000122457999999999999753  3566666

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.79  E-value=2.6e-18  Score=169.59  Aligned_cols=177  Identities=16%  Similarity=0.118  Sum_probs=130.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHH-HcCCeEEEEecCCCCCC--CCcccHHHHHHHHHHcC-----Ce---eeeeeecCCCh
Q psy6113           9 GLTIFITGASRGIGKAIALKAA-KDGANIVIAAKTAEPHP--KLPGTIYSAAKEVEDAG-----GN---CLPCIVDIRDE   77 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~~~~--~~~~~i~~~~~~~~~~g-----~~---~~~~~~Dl~~~   77 (406)
                      +++++||||+|+||++++++|+ ++|++|++++|+.....  ..........+.+....     .+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 99999999999765420  00000112222222221     23   78899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      +++++++++    ++++|+||||||....                                                   
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~---------------------------------------------------  106 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV---------------------------------------------------  106 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH---------------------------------------------------
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc---------------------------------------------------
Confidence            998877653    5679999999996421                                                   


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------------cC
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------------FK  221 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------------~~  221 (406)
                                  ..+.+++...+++|+.+++++++++    ++.+.++||++||...+....                ..
T Consensus       107 ------------~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~  170 (397)
T 1gy8_A          107 ------------GESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKS  170 (397)
T ss_dssp             ------------HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCB
T ss_pred             ------------CcchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHhCCCCcccccccccCcCccCCCC
Confidence                        1134567889999999999999986    444567999999965432210                01


Q ss_pred             CchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhh
Q psy6113         222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA  259 (406)
Q Consensus       222 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~  259 (406)
                      +...|+.||++.+.+++.++.++   |++++++.|+++
T Consensus       171 p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v  205 (397)
T 1gy8_A          171 PESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNA  205 (397)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccce
Confidence            25789999999999999999987   799999999753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.79  E-value=4.8e-18  Score=166.12  Aligned_cols=213  Identities=12%  Similarity=0.100  Sum_probs=139.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||+|+||++++++|+++|++|++++|+.+....  +.+..........+.++.++.+|++|.+++.++++.+ 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNT--ERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccch--HHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-
Confidence            3789999999999999999999999999999998654210  0011111111112456888999999999999888765 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++|||||....                                                              
T Consensus        78 ----~~d~vih~A~~~~~--------------------------------------------------------------   91 (372)
T 1db3_A           78 ----QPDEVYNLGAMSHV--------------------------------------------------------------   91 (372)
T ss_dssp             ----CCSEEEECCCCCTT--------------------------------------------------------------
T ss_pred             ----CCCEEEECCcccCc--------------------------------------------------------------
Confidence                68999999996432                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~  239 (406)
                       ..+.+++...+++|+.++.++++++.+...+ +.++||++||...+...         +..+...|+.||++.+.+++.
T Consensus        92 -~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (372)
T 1db3_A           92 -AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN  169 (372)
T ss_dssp             -TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHH
Confidence             2334567788999999999999999776543 23799999997543221         012467899999999999999


Q ss_pred             HHHhhcCCCeEEEEec------chhh---hhH---HHHHHhc-CCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         240 MAEEFKGDNIAVNALW------PRTA---IYT---AAIEMLT-GGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       240 la~e~~~~gI~vn~v~------PG~~---~~t---~~~~~~~-~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++.+++   +.+..+.      |+..   ...   .+..... ....       .....+...+|+|++++.++..
T Consensus       170 ~~~~~~---~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~  242 (372)
T 1db3_A          170 YRESYG---MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ  242 (372)
T ss_dssp             HHHHHC---CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS
T ss_pred             HHHHhC---CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhc
Confidence            998863   4333332      3310   011   1111111 1110       1122356789999999988864

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.78  E-value=1.4e-18  Score=167.73  Aligned_cols=212  Identities=14%  Similarity=0.188  Sum_probs=148.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc---C---CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKD---G---ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~---G---a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +++||||+|+||++++++|+++   |   ++|++++|+......  ..+    ..+. .+.++.++.+|++|++++++++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~--~~~----~~~~-~~~~~~~~~~Dl~d~~~~~~~~   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANL----APVD-ADPRLRFVHGDIRDAGLLAREL   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGG----GGGT-TCTTEEEEECCTTCHHHHHHHT
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch--hhh----hhcc-cCCCeEEEEcCCCCHHHHHHHh
Confidence            5899999999999999999997   8   999999997532110  011    1111 1356888999999998877765


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                             +++|++|||||....                                                          
T Consensus        75 -------~~~d~Vih~A~~~~~----------------------------------------------------------   89 (337)
T 1r6d_A           75 -------RGVDAIVHFAAESHV----------------------------------------------------------   89 (337)
T ss_dssp             -------TTCCEEEECCSCCCH----------------------------------------------------------
T ss_pred             -------cCCCEEEECCCccCc----------------------------------------------------------
Confidence                   579999999996421                                                          


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSM  235 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~  235 (406)
                           +.+.++++..+++|+.++.++++++.+.    +.++||++||...+...         +..+...|+.||++.+.
T Consensus        90 -----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           90 -----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             -----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             -----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence                 1233456788999999999999998664    34799999996543211         12346789999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhhH---------HHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcCCCCC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIYT---------AAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSSNPPS  299 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~~~~  299 (406)
                      +++.++.++   |++++.+.||++...         .+.........       .....+..++|+|+++++++...   
T Consensus       161 ~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---  234 (337)
T 1r6d_A          161 VARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG---  234 (337)
T ss_dssp             HHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC---
Confidence            999998875   689999999743211         11122111111       11224567899999999998643   


Q ss_pred             ccceEE-Eehh
Q psy6113         300 LTGQFL-IDDE  309 (406)
Q Consensus       300 ~tG~~i-~d~g  309 (406)
                      .+|+.+ +.++
T Consensus       235 ~~g~~~~v~~~  245 (337)
T 1r6d_A          235 RAGEIYHIGGG  245 (337)
T ss_dssp             CTTCEEEECCC
T ss_pred             CCCCEEEeCCC
Confidence            256555 5443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.78  E-value=4.4e-18  Score=164.33  Aligned_cols=213  Identities=17%  Similarity=0.197  Sum_probs=143.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc---CCeeeeeeecCCChHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA---GGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~---g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|+++||||+|+||++++++|+++|++|+++.|+.+...       . ...+...   +.++.++.+|++|.++++++
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~-------~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   74 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVK-------K-VKHLLDLPKAETHLTLWKADLADEGSFDEA   74 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHH-------H-HHHHHTSTTHHHHEEEEECCTTSTTTTHHH
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhH-------H-HHHHHhcccCCCeEEEEEcCCCCHHHHHHH
Confidence            46899999999999999999999999999999999765311       1 1111111   12577889999999988776


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++       .+|++||+|+...   ..                                                     
T Consensus        75 ~~-------~~d~Vih~A~~~~---~~-----------------------------------------------------   91 (337)
T 2c29_D           75 IK-------GCTGVFHVATPMD---FE-----------------------------------------------------   91 (337)
T ss_dssp             HT-------TCSEEEECCCCCC---SS-----------------------------------------------------
T ss_pred             Hc-------CCCEEEEeccccC---CC-----------------------------------------------------
Confidence            54       5799999998531   10                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc--------------------CCc
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF--------------------KNH  223 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~--------------------~~~  223 (406)
                            .  .+.....+++|+.++.++++++.+..   +.++||++||..+..+...                    +..
T Consensus        92 ------~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (337)
T 2c29_D           92 ------S--KDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTA  160 (337)
T ss_dssp             ------C--SSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             ------C--CChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCcc
Confidence                  1  12235688999999999999986542   2479999999875432100                    123


Q ss_pred             hhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH--------HHHHH---hcCCCcc----cccccCChhhHHHH
Q psy6113         224 VAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT--------AAIEM---LTGGSAD----AKATSRKPEIMADA  288 (406)
Q Consensus       224 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t--------~~~~~---~~~~~~~----~~~~~~~pe~vA~~  288 (406)
                      ..|+.||.+.+.+++.++.+   +||++++|.|+.+...        .....   .......    ...++..++|+|++
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a  237 (337)
T 2c29_D          161 WMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNA  237 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHH
Confidence            46999999999988877654   3799999999853211        00000   1111000    12336789999999


Q ss_pred             HHHhhcCCCCCccceEEE
Q psy6113         289 AYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       289 v~~L~s~~~~~~tG~~i~  306 (406)
                      +++++...  ..+|.++.
T Consensus       238 ~~~~~~~~--~~~~~~~~  253 (337)
T 2c29_D          238 HIYLFENP--KAEGRYIC  253 (337)
T ss_dssp             HHHHHHCT--TCCEEEEE
T ss_pred             HHHHhcCc--ccCceEEE
Confidence            99998642  34666653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.78  E-value=3.2e-18  Score=167.63  Aligned_cols=214  Identities=16%  Similarity=0.125  Sum_probs=150.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCC-ChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIR-DEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~-~~~~v~   81 (406)
                      +.+|++++++||||+|.||++++++|+++ |++|++++|+.++...+            ....++.++.+|++ +.+++.
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~------------~~~~~v~~~~~Dl~~d~~~~~   86 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL------------VKHERMHFFEGDITINKEWVE   86 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG------------GGSTTEEEEECCTTTCHHHHH
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh------------ccCCCeEEEeCccCCCHHHHH
Confidence            55678899999999999999999999999 99999999987654321            01246889999999 999988


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++       ++|+|||+||....                                                       
T Consensus        87 ~~~~-------~~d~Vih~A~~~~~-------------------------------------------------------  104 (372)
T 3slg_A           87 YHVK-------KCDVILPLVAIATP-------------------------------------------------------  104 (372)
T ss_dssp             HHHH-------HCSEEEECBCCCCH-------------------------------------------------------
T ss_pred             HHhc-------cCCEEEEcCccccH-------------------------------------------------------
Confidence            8776       58999999996532                                                       


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---cc-------------CCchh
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---WF-------------KNHVA  225 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---~~-------------~~~~~  225 (406)
                              ....++....+++|+.++..+++++    ++.+ .++|++||...+...   ++             .+...
T Consensus       105 --------~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~  171 (372)
T 3slg_A          105 --------ATYVKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWI  171 (372)
T ss_dssp             --------HHHHHCHHHHHHHHTTTTHHHHHHH----HHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHH
T ss_pred             --------HHHhhCHHHHHHHHHHHHHHHHHHH----HHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCc
Confidence                    1123455678899999999998887    4445 799999996433211   00             13347


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhh-----------------HHHHHHh-cCCCc------ccccccCC
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIY-----------------TAAIEML-TGGSA------DAKATSRK  281 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~-----------------t~~~~~~-~~~~~------~~~~~~~~  281 (406)
                      |+.||.+.+.+++.++.+    |++++.+.|+.+..                 ..+.... .....      .....+..
T Consensus       172 Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  247 (372)
T 3slg_A          172 YACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTY  247 (372)
T ss_dssp             HHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEE
T ss_pred             HHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEE
Confidence            999999999999988876    79999999875321                 1122221 12111      11123557


Q ss_pred             hhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         282 PEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       282 pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      .+|+|+++++++........|+.+ +.+
T Consensus       248 v~Dva~a~~~~~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          248 VDDGISALMKIIENSNGVATGKIYNIGN  275 (372)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             HHHHHHHHHHHHhcccCcCCCceEEeCC
Confidence            899999999999764433456655 544

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.78  E-value=2.3e-18  Score=164.58  Aligned_cols=193  Identities=14%  Similarity=0.076  Sum_probs=137.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||+|+||++++++|+++|+.|++..|+.....              .....+.++.+|+++ +++.++++    
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~--------------~~~~~~~~~~~Dl~~-~~~~~~~~----   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE--------------FVNEAARLVKADLAA-DDIKDYLK----   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG--------------GSCTTEEEECCCTTT-SCCHHHHT----
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh--------------hcCCCcEEEECcCCh-HHHHHHhc----
Confidence            47999999999999999999999954444444433211              113457889999999 77776654    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|++||+|+....                                                               
T Consensus        63 ---~~d~vih~a~~~~~---------------------------------------------------------------   76 (313)
T 3ehe_A           63 ---GAEEVWHIAANPDV---------------------------------------------------------------   76 (313)
T ss_dssp             ---TCSEEEECCCCCCC---------------------------------------------------------------
T ss_pred             ---CCCEEEECCCCCCh---------------------------------------------------------------
Confidence               79999999995321                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~l  240 (406)
                      ..+.+++...+++|+.+++++++++    ++.+.++||++||...+...         +..+...|+.||++.+.+++.+
T Consensus        77 ~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  152 (313)
T 3ehe_A           77 RIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESY  152 (313)
T ss_dssp             C-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            4455678889999999999998885    45566799999997654211         1234678999999999999999


Q ss_pred             HHhhcCCCeEEEEecchhhhhH--------HHHHH-hcCCC-------cccccccCChhhHHHHHHHhhc
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYT--------AAIEM-LTGGS-------ADAKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t--------~~~~~-~~~~~-------~~~~~~~~~pe~vA~~v~~L~s  294 (406)
                      +.++   |++++.+.|+.+...        .+... .....       ......+..++|+|+++++++.
T Consensus       153 ~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~  219 (313)
T 3ehe_A          153 CHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR  219 (313)
T ss_dssp             HHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT
T ss_pred             HHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc
Confidence            9886   799999999854221        11111 11111       1112335678999999999987

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.78  E-value=4.7e-18  Score=164.67  Aligned_cols=221  Identities=14%  Similarity=0.118  Sum_probs=147.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ++++++++++||||+|+||++++++|+++|  ++|+..+|.......  ..+    ..+ ....++.++.+|++|++++.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~--~~l----~~~-~~~~~~~~~~~Dl~d~~~~~   91 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL--NNV----KSI-QDHPNYYFVKGEIQNGELLE   91 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG--GGG----TTT-TTCTTEEEEECCTTCHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccch--hhh----hhh-ccCCCeEEEEcCCCCHHHHH
Confidence            456789999999999999999999999999  677777776532110  001    000 11246889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++..     ++|+|||+||....                                                       
T Consensus        92 ~~~~~~-----~~d~Vih~A~~~~~-------------------------------------------------------  111 (346)
T 4egb_A           92 HVIKER-----DVQVIVNFAAESHV-------------------------------------------------------  111 (346)
T ss_dssp             HHHHHH-----TCCEEEECCCCC---------------------------------------------------------
T ss_pred             HHHhhc-----CCCEEEECCcccch-------------------------------------------------------
Confidence            988763     69999999997532                                                       


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------ccCCchhhhHhhH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------WFKNHVAYTISKY  231 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------~~~~~~~Y~asKa  231 (406)
                              ..+.+++...+++|+.++..+++++.    +.+.++||++||...+...          +..+...|+.||.
T Consensus       112 --------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~  179 (346)
T 4egb_A          112 --------DRSIENPIPFYDTNVIGTVTLLELVK----KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKA  179 (346)
T ss_dssp             ---------------CHHHHHHTHHHHHHHHHHH----HSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHH
T ss_pred             --------hhhhhCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHH
Confidence                    22345567789999999999998884    4455789999997544321          0123478999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEecchhhhhH---------HHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYT---------AAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~PG~~~~t---------~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +.+.+++.++.++   |++++.+.|+++...         .+.........       .....+..++|+|+++++++..
T Consensus       180 ~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  256 (346)
T 4egb_A          180 SADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHK  256 (346)
T ss_dssp             HHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence            9999999998875   789999998743221         12222222111       1112335689999999999875


Q ss_pred             CCCCccceEE-Eehh
Q psy6113         296 NPPSLTGQFL-IDDE  309 (406)
Q Consensus       296 ~~~~~tG~~i-~d~g  309 (406)
                      ..   +|+.+ +.++
T Consensus       257 ~~---~g~~~~i~~~  268 (346)
T 4egb_A          257 GR---VGEVYNIGGN  268 (346)
T ss_dssp             CC---TTCEEEECCS
T ss_pred             CC---CCCEEEECCC
Confidence            43   56555 4443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.78  E-value=6.5e-19  Score=176.09  Aligned_cols=214  Identities=12%  Similarity=0.053  Sum_probs=146.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH---------HcCCeeeeeeecC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE---------DAGGNCLPCIVDI   74 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~---------~~g~~~~~~~~Dl   74 (406)
                      +.+..+++++||||+|+||++++++|+++|++|++++|+.+....    .+...+.+.         ..+.++.++.+|+
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl  139 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIA----WYKLMTNLNDYFSEETVEMMLSNIEVIVGDF  139 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHH----HHHHHHHHHHHSCHHHHHHHHTTEEEEEECC
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHH----HHHHHHHHHHhccccccccccCceEEEeCCC
Confidence            445678999999999999999999999999999999998763111    112222222         2246789999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcc
Q psy6113          75 RDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGID  154 (406)
Q Consensus        75 ~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id  154 (406)
                      ++++++.        .++++|+||||||....                                                
T Consensus       140 ~d~~~l~--------~~~~~d~Vih~A~~~~~------------------------------------------------  163 (427)
T 4f6c_A          140 ECMDDVV--------LPENMDTIIHAGARTDH------------------------------------------------  163 (427)
T ss_dssp             ---CCCC--------CSSCCSEEEECCCCC--------------------------------------------------
T ss_pred             CCcccCC--------CcCCCCEEEECCcccCC------------------------------------------------
Confidence            9988776        56789999999996421                                                


Q ss_pred             eEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------------
Q psy6113         155 ILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------------  219 (406)
Q Consensus       155 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------------  219 (406)
                                        .+++...+++|+.++.++++++.+     +..+||++||...  +..               
T Consensus       164 ------------------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~--G~~~~~~~~~~~~~E~~~  218 (427)
T 4f6c_A          164 ------------------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV--GTYFDIDTEDVTFSEADV  218 (427)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG--GSEECSSCSCCEECTTCS
T ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh--CCCccCCCCCcccccccc
Confidence                              234677889999999999999865     3479999999876  110               


Q ss_pred             ---cCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH----------------HHHHHhcCCCc------c
Q psy6113         220 ---FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT----------------AAIEMLTGGSA------D  274 (406)
Q Consensus       220 ---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t----------------~~~~~~~~~~~------~  274 (406)
                         ......|+.||++.+.+++.++.    .|+++++|.||++...                .+.........      .
T Consensus       219 ~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (427)
T 4f6c_A          219 YKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE  294 (427)
T ss_dssp             CSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHT
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcccc
Confidence               12567899999999999998754    5899999999853221                11111111110      1


Q ss_pred             cccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         275 AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       275 ~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ....+...+|+|+++++++....   .|+++ +.++
T Consensus       295 ~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~  327 (427)
T 4f6c_A          295 MPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSP  327 (427)
T ss_dssp             CEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCS
T ss_pred             ceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCC
Confidence            11235578999999999987643   55555 5443

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.77  E-value=2.5e-19  Score=161.64  Aligned_cols=194  Identities=11%  Similarity=0.078  Sum_probs=141.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+++++||||+|+||++++++|+++|+  +|++++|+.++ .                ..++.++.+|+++++++.+++ 
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~----------------~~~~~~~~~D~~~~~~~~~~~-   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E----------------HPRLDNPVGPLAELLPQLDGS-   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C----------------CTTEECCBSCHHHHGGGCCSC-
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c----------------CCCceEEeccccCHHHHHHhh-
Confidence            468999999999999999999999998  99999998764 1                235778889998887665543 


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                              +|++|||||....                                                           
T Consensus        66 --------~d~vi~~a~~~~~-----------------------------------------------------------   78 (215)
T 2a35_A           66 --------IDTAFCCLGTTIK-----------------------------------------------------------   78 (215)
T ss_dssp             --------CSEEEECCCCCHH-----------------------------------------------------------
T ss_pred             --------hcEEEECeeeccc-----------------------------------------------------------
Confidence                    8999999995421                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                            +.++++..+++|+.++..+++++.    +.+.++||++||.....+    +...|+.+|++++.+++.      
T Consensus        79 ------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~----~~~~y~~sK~~~e~~~~~------  138 (215)
T 2a35_A           79 ------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK----SSIFYNRVKGELEQALQE------  138 (215)
T ss_dssp             ------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT----CSSHHHHHHHHHHHHHTT------
T ss_pred             ------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC----CccHHHHHHHHHHHHHHH------
Confidence                  134567788999999999998874    345579999999877643    346899999999998875      


Q ss_pred             CCCeE-EEEecchhhhhHH----HHHHhcCCCccc----ccccCChhhHHHHHHHhhcCCCCCccceEEEehhHH
Q psy6113         246 GDNIA-VNALWPRTAIYTA----AIEMLTGGSADA----KATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVL  311 (406)
Q Consensus       246 ~~gI~-vn~v~PG~~~~t~----~~~~~~~~~~~~----~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g~~  311 (406)
                       .|++ ++.|.||++....    +.+.+... ..+    ...+..++|+|+++++++..+.   .|.+.+.++..
T Consensus       139 -~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~~~  208 (215)
T 2a35_A          139 -QGWPQLTIARPSLLFGPREEFRLAEILAAP-IARILPGKYHGIEACDLARALWRLALEEG---KGVRFVESDEL  208 (215)
T ss_dssp             -SCCSEEEEEECCSEESTTSCEEGGGGTTCC-CC----CHHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHHHH
T ss_pred             -cCCCeEEEEeCceeeCCCCcchHHHHHHHh-hhhccCCCcCcEeHHHHHHHHHHHHhcCC---CCceEEcHHHH
Confidence             3798 9999999643221    11111100 011    1234578999999999997643   45555655543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=1e-17  Score=164.21  Aligned_cols=212  Identities=14%  Similarity=0.107  Sum_probs=144.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+++||||+|+||++++++|+++|++|++++|+.+....  +.+......... .+.++.++.+|++|.+++.++++.+ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT--GRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--TTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccch--hhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-
Confidence            689999999999999999999999999999998654211  011111111110 2346888999999999999888765 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|+||||||....                                                              
T Consensus       102 ----~~d~vih~A~~~~~--------------------------------------------------------------  115 (375)
T 1t2a_A          102 ----KPTEIYNLGAQSHV--------------------------------------------------------------  115 (375)
T ss_dssp             ----CCSEEEECCSCCCH--------------------------------------------------------------
T ss_pred             ----CCCEEEECCCcccc--------------------------------------------------------------
Confidence                68999999996421                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~  239 (406)
                       ..+.++++..+++|+.++.++++++.+...+ +.++||++||...+...         +..+...|+.||++.+.+++.
T Consensus       116 -~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  193 (375)
T 1t2a_A          116 -KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVN  193 (375)
T ss_dssp             -HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHH
Confidence             1234567889999999999999999776542 23799999997665321         112456899999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhh---------hhH---HHHHH-hcCCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         240 MAEEFKGDNIAVNALWPRTA---------IYT---AAIEM-LTGGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~---------~~t---~~~~~-~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ++.++   ++.+..+.|+.+         ..+   .+... ......       .....+...+|+|++++.++..
T Consensus       194 ~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~  266 (375)
T 1t2a_A          194 FREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN  266 (375)
T ss_dssp             HHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             HHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhc
Confidence            99876   455555543210         111   11111 111110       1122356789999999998864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.77  E-value=4.7e-18  Score=168.03  Aligned_cols=181  Identities=15%  Similarity=0.080  Sum_probs=130.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC----------CCCCcccHHHHHHHH-HHcCCeeeeeeecC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP----------HPKLPGTIYSAAKEV-EDAGGNCLPCIVDI   74 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~----------~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl   74 (406)
                      ..++..++||||+|.||++++++|+++|++|++++|....          +.... .+.+..... ...+.++.++.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIA-SIHDRISRWKALTGKSIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCC-CHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccc-hhhhhhhhHhhccCCceEEEECCC
Confidence            4678999999999999999999999999999999885321          00000 001111111 12355788899999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcc
Q psy6113          75 RDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGID  154 (406)
Q Consensus        75 ~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id  154 (406)
                      ++.+++.++++..     ++|+||||||.......                                             
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~---------------------------------------------  116 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSAPYS---------------------------------------------  116 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCHHHH---------------------------------------------
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCccch---------------------------------------------
Confidence            9999998888765     69999999996532111                                             


Q ss_pred             eEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCC---------------
Q psy6113         155 ILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPF---------------  218 (406)
Q Consensus       155 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~---------------  218 (406)
                                     ..+++++...+++|+.++.++++++.+.    +. .+||++||.+.+...               
T Consensus       117 ---------------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~  177 (404)
T 1i24_A          117 ---------------MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYGTPNIDIEEGYITITHNG  177 (404)
T ss_dssp             ---------------TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETT
T ss_pred             ---------------hhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHHhCCCCCCCCcccccccccc
Confidence                           2345667889999999999999988543    33 499999997543210               


Q ss_pred             -------ccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhh
Q psy6113         219 -------WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA  259 (406)
Q Consensus       219 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~  259 (406)
                             +..+...|+.||++.+.+++.++.++   |+++++|.||.+
T Consensus       178 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v  222 (404)
T 1i24_A          178 RTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVV  222 (404)
T ss_dssp             EEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             ccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEeccee
Confidence                   12345689999999999999998876   799999999853

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.77  E-value=3.8e-18  Score=167.69  Aligned_cols=167  Identities=11%  Similarity=0.084  Sum_probs=127.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+++++++||||+|+||++++++|+++| ++|++++|+.....+.          +. ...++.++.+|++|+++++++
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----------l~-~~~~v~~~~~Dl~d~~~l~~~   96 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN----------VP-DHPAVRFSETSITDDALLASL   96 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG----------SC-CCTTEEEECSCTTCHHHHHHC
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh----------cc-CCCceEEEECCCCCHHHHHHH
Confidence            45789999999999999999999999999 9999999986542110          00 134688899999999887665


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++       ++|+|||+||....                                                         
T Consensus        97 ~~-------~~d~Vih~A~~~~~---------------------------------------------------------  112 (377)
T 2q1s_A           97 QD-------EYDYVFHLATYHGN---------------------------------------------------------  112 (377)
T ss_dssp             CS-------CCSEEEECCCCSCH---------------------------------------------------------
T ss_pred             hh-------CCCEEEECCCccCc---------------------------------------------------------
Confidence            43       79999999996421                                                         


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCC---------C-----cc-CCchhhh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNP---------F-----WF-KNHVAYT  227 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~---------~-----~~-~~~~~Y~  227 (406)
                            ..+.+++...+++|+.++..+++++    ++. +.++||++||...+..         .     +. .+...|+
T Consensus       113 ------~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~  182 (377)
T 2q1s_A          113 ------QSSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYS  182 (377)
T ss_dssp             ------HHHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHH
T ss_pred             ------hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchH
Confidence                  1234567889999999999999988    344 4579999999754311         0     11 3456899


Q ss_pred             HhhHHHHHHHHHHHHhhcCCCeEEEEecchhh
Q psy6113         228 ISKYGMSMCALGMAEEFKGDNIAVNALWPRTA  259 (406)
Q Consensus       228 asKaal~~l~~~la~e~~~~gI~vn~v~PG~~  259 (406)
                      .+|++.+.+++.++.++   |++++.|.||++
T Consensus       183 ~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v  211 (377)
T 2q1s_A          183 MSKIFGEFYSVYYHKQH---QLPTVRARFQNV  211 (377)
T ss_dssp             HHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHh---CCCEEEEeeccE
Confidence            99999999999998875   799999999853

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.77  E-value=1.6e-17  Score=160.11  Aligned_cols=207  Identities=15%  Similarity=0.085  Sum_probs=143.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+++++||||+|+||++++++|+++|++|++++|+.+....      ...+.+. .+.++.++.+|++|.+++.++++.+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR------WRLRELG-IEGDIQYEDGDMADACSVQRAVIKA   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC------HHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc------cchhhcc-ccCceEEEECCCCCHHHHHHHHHHc
Confidence            57889999999999999999999999999999998765321      1111111 2346788999999999999888765


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++|||||....                                                             
T Consensus        86 -----~~d~Vih~A~~~~~-------------------------------------------------------------   99 (335)
T 1rpn_A           86 -----QPQEVYNLAAQSFV-------------------------------------------------------------   99 (335)
T ss_dssp             -----CCSEEEECCSCCCH-------------------------------------------------------------
T ss_pred             -----CCCEEEECccccch-------------------------------------------------------------
Confidence                 68999999996421                                                             


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~  237 (406)
                        ..+.+++...+++|+.++.++++++.+    .+ .++||++||...+.+..         ..+...|+.||++.+.++
T Consensus       100 --~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  173 (335)
T 1rpn_A          100 --GASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWIT  173 (335)
T ss_dssp             --HHHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             --hhhhhChHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHH
Confidence              112345678899999999999998854    34 37999999975543210         123468999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhh---------h---HHHHHH-hcCCCc-------ccccccCChhhHHHHHHHhhcCC
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAI---------Y---TAAIEM-LTGGSA-------DAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~---------~---t~~~~~-~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +.++.++   ++++..+.|+.+.         .   ..+... ......       .....+...+|+|++++.++...
T Consensus       174 ~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~  249 (335)
T 1rpn_A          174 VNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  249 (335)
T ss_dssp             HHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC
Confidence            9998876   4666666553210         0   111111 111111       11123457899999999998653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.76  E-value=2.7e-18  Score=167.31  Aligned_cols=204  Identities=15%  Similarity=0.130  Sum_probs=140.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      |.++++++++||||+|+||++++++|+++| ++|++++|+.....     .    ..+   . .+. +.+|+++.+.+++
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~----~~~---~-~~~-~~~d~~~~~~~~~  106 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----F----VNL---V-DLN-IADYMDKEDFLIQ  106 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----G----GGT---T-TSC-CSEEEEHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----h----hcc---c-Cce-EeeecCcHHHHHH
Confidence            345778999999999999999999999999 89999998765310     0    001   1 122 6789999988887


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++.  ..++++|+||||||....                                                        
T Consensus       107 ~~~~--~~~~~~d~Vih~A~~~~~--------------------------------------------------------  128 (357)
T 2x6t_A          107 IMAG--EEFGDVEAIFHEGACSST--------------------------------------------------------  128 (357)
T ss_dssp             HHTT--CCCSSCCEEEECCSCCCT--------------------------------------------------------
T ss_pred             HHhh--cccCCCCEEEECCcccCC--------------------------------------------------------
Confidence            7653  235689999999996432                                                        


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGM  233 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal  233 (406)
                               +.++++..+++|+.++..+++++.+    .+. +||++||...+....         ......|+.||++.
T Consensus       129 ---------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~  194 (357)
T 2x6t_A          129 ---------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLF  194 (357)
T ss_dssp             ---------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHH
T ss_pred             ---------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHH
Confidence                     2234678899999999999999865    344 999999986543211         01256899999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhH-------------HHHHHhcCCC-------ccc-ccccCChhhHHHHHHHh
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYT-------------AAIEMLTGGS-------ADA-KATSRKPEIMADAAYYI  292 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t-------------~~~~~~~~~~-------~~~-~~~~~~pe~vA~~v~~L  292 (406)
                      +.+++.++.++   |++++.|.||++...             .+........       ... ...+..++|+|++++++
T Consensus       195 E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~  271 (357)
T 2x6t_A          195 DEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF  271 (357)
T ss_dssp             HHHHHHHGGGC---SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc---CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHH
Confidence            99999988764   799999998753311             1111111111       111 23456899999999999


Q ss_pred             hcCC
Q psy6113         293 LSSN  296 (406)
Q Consensus       293 ~s~~  296 (406)
                      +...
T Consensus       272 ~~~~  275 (357)
T 2x6t_A          272 LENG  275 (357)
T ss_dssp             HHHC
T ss_pred             HhcC
Confidence            8754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.75  E-value=1.2e-17  Score=161.37  Aligned_cols=210  Identities=13%  Similarity=0.115  Sum_probs=145.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~~i   87 (406)
                      ++++||||+|+||++++++|+++ |++|++++|+.++...+           . ...++.++.+|+++. +.++++++  
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-----------~-~~~~~~~~~~D~~~~~~~~~~~~~--   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-----------L-NHPHFHFVEGDISIHSEWIEYHVK--   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-----------T-TCTTEEEEECCTTTCSHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh-----------h-cCCCeEEEeccccCcHHHHHhhcc--
Confidence            36999999999999999999998 89999999986542210           0 124678899999984 55665554  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++||+||...+.                                                            
T Consensus        67 -----~~d~vih~A~~~~~~------------------------------------------------------------   81 (345)
T 2bll_A           67 -----KCDVVLPLVAIATPI------------------------------------------------------------   81 (345)
T ss_dssp             -----HCSEEEECBCCCCHH------------------------------------------------------------
T ss_pred             -----CCCEEEEcccccCcc------------------------------------------------------------
Confidence                 479999999964321                                                            


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---c-------------CCchhhhHhhH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---F-------------KNHVAYTISKY  231 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---~-------------~~~~~Y~asKa  231 (406)
                         ...+++...+++|+.++..+++++.    +.+ ++||++||...+....   .             .....|+.||+
T Consensus        82 ---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~  153 (345)
T 2bll_A           82 ---EYTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (345)
T ss_dssp             ---HHHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             ---chhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHH
Confidence               1124567788999999999988874    344 7999999965432110   0             12237999999


Q ss_pred             HHHHHHHHHHHhhcCCCeEEEEecchhhhh-----------------HHHHHH-hcCCCc------ccccccCChhhHHH
Q psy6113         232 GMSMCALGMAEEFKGDNIAVNALWPRTAIY-----------------TAAIEM-LTGGSA------DAKATSRKPEIMAD  287 (406)
Q Consensus       232 al~~l~~~la~e~~~~gI~vn~v~PG~~~~-----------------t~~~~~-~~~~~~------~~~~~~~~pe~vA~  287 (406)
                      +.+.+++.++.++   |++++.+.||.+..                 ..+... ......      .....+..++|+|+
T Consensus       154 ~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  230 (345)
T 2bll_A          154 LLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  230 (345)
T ss_dssp             HHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHH
Confidence            9999999998775   79999999985421                 111111 112111      01123567999999


Q ss_pred             HHHHhhcCCCCCccceEE-Eehh
Q psy6113         288 AAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       288 ~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++++++.......+|+.+ +.++
T Consensus       231 a~~~~~~~~~~~~~g~~~~i~~~  253 (345)
T 2bll_A          231 ALYRIIENAGNRCDGEIINIGNP  253 (345)
T ss_dssp             HHHHHHHCGGGTTTTEEEEECCT
T ss_pred             HHHHHHhhccccCCCceEEeCCC
Confidence            999998754333566655 4443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.75  E-value=2.8e-18  Score=164.02  Aligned_cols=204  Identities=12%  Similarity=0.071  Sum_probs=119.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.                  . +  ++.+|+++++++.++++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------------~-~--~~~~Dl~d~~~~~~~~~~~-   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------------P-K--FEQVNLLDSNAVHHIIHDF-   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CHHHHHHH-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------------C-C--eEEecCCCHHHHHHHHHhh-
Confidence            5789999999999999999999999999999986532                  0 1  6778999999988887764 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++|||||....                                                              
T Consensus        60 ----~~d~vih~A~~~~~--------------------------------------------------------------   73 (315)
T 2ydy_A           60 ----QPHVIVHCAAERRP--------------------------------------------------------------   73 (315)
T ss_dssp             ----CCSEEEECC-------------------------------------------------------------------
T ss_pred             ----CCCEEEECCcccCh--------------------------------------------------------------
Confidence                78999999996432                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------ccCCchhhhHhhHHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------WFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------~~~~~~~Y~asKaal~~l~~~l  240 (406)
                       ..+.+++...+++|+.++.++++++.+    .+ ++||++||...+.+.        +..+...|+.||++.+.+++.+
T Consensus        74 -~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           74 -DVVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             ---------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             -hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence             223456788999999999999999865    23 599999998765330        0134578999999999999998


Q ss_pred             HHhhcCCCeEEEEecchhhhh------HHHHHHhc-CCCc-----ccccccCChhhHHHHHHHhhcCC-CCCccceEE-E
Q psy6113         241 AEEFKGDNIAVNALWPRTAIY------TAAIEMLT-GGSA-----DAKATSRKPEIMADAAYYILSSN-PPSLTGQFL-I  306 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~------t~~~~~~~-~~~~-----~~~~~~~~pe~vA~~v~~L~s~~-~~~~tG~~i-~  306 (406)
                      +.++  ..||++.|. |....      ..+.+... ....     .....+..++|+|+++++++.+. .....|+.+ +
T Consensus       148 ~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          148 NLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             CTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             CCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            6554  357877776 42111      11222221 1110     12234568999999999998642 112345544 5


Q ss_pred             ehh
Q psy6113         307 DDE  309 (406)
Q Consensus       307 d~g  309 (406)
                      .+|
T Consensus       225 ~~~  227 (315)
T 2ydy_A          225 SGN  227 (315)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            443

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.74  E-value=2e-17  Score=154.63  Aligned_cols=195  Identities=17%  Similarity=0.155  Sum_probs=140.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|+||++++++|+ +|++|++++|+.+. .               .+     +.+|++|+++++++++.+   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~---------------~~-----~~~Dl~~~~~~~~~~~~~---   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q---------------GG-----YKLDLTDFPRLEDFIIKK---   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T---------------TC-----EECCTTSHHHHHHHHHHH---
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C---------------CC-----ceeccCCHHHHHHHHHhc---
Confidence            58999999999999999999 58999999998742 0               11     789999999999888765   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++|||||....                                                               +
T Consensus        57 --~~d~vi~~a~~~~~---------------------------------------------------------------~   71 (273)
T 2ggs_A           57 --RPDVIINAAAMTDV---------------------------------------------------------------D   71 (273)
T ss_dssp             --CCSEEEECCCCCCH---------------------------------------------------------------H
T ss_pred             --CCCEEEECCcccCh---------------------------------------------------------------h
Confidence              79999999996431                                                               2


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------cCCchhhhHhhHHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------FKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      .+.++++..+++|+.++..+++++.+    .+ ++||++||...+.+..        ..+...|+.||++++.+++.   
T Consensus        72 ~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~---  143 (273)
T 2ggs_A           72 KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ---  143 (273)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC---
T ss_pred             hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC---
Confidence            23467888999999999999999853    33 5999999987664321        01356899999999999988   


Q ss_pred             hhcCCCeEEEEecchh-hhhHHHHHHhcCCCcc----cccccCChhhHHHHHHHhhcCCCCCccceEEEeh
Q psy6113         243 EFKGDNIAVNALWPRT-AIYTAAIEMLTGGSAD----AKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD  308 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~-~~~t~~~~~~~~~~~~----~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~  308 (406)
                       +....||++.|+ |. .....+..........    ....+..++|+|+++++++++..   +|.+.+.+
T Consensus       144 -~~~~~iR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~---~g~~~i~~  209 (273)
T 2ggs_A          144 -DDSLIIRTSGIF-RNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK---TGIIHVAG  209 (273)
T ss_dssp             -TTCEEEEECCCB-SSSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC---CEEEECCC
T ss_pred             -CCeEEEeccccc-cccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc---CCeEEECC
Confidence             334568888887 31 0111111222121110    13456789999999999997532   55433443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.74  E-value=2.8e-17  Score=158.06  Aligned_cols=161  Identities=13%  Similarity=0.113  Sum_probs=126.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++||||+|+||++++++|+++|++|++++|+.....+             ....++.++.+|+++.+++++++++   
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~~~D~~~~~~~~~~~~~---   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED-------------AITEGAKFYNGDLRDKAFLRDVFTQ---   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------------GSCTTSEEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh-------------hcCCCcEEEECCCCCHHHHHHHHhh---
Confidence            579999999999999999999999999999987654211             1112577889999999998887765   


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                        .++|++||+||....                                                               
T Consensus        66 --~~~d~vih~a~~~~~---------------------------------------------------------------   80 (330)
T 2c20_A           66 --ENIEAVMHFAADSLV---------------------------------------------------------------   80 (330)
T ss_dssp             --SCEEEEEECCCCCCH---------------------------------------------------------------
T ss_pred             --cCCCEEEECCcccCc---------------------------------------------------------------
Confidence              479999999996421                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~l  240 (406)
                      ..+.+++...+++|+.++..+++++    ++.+.++||++||...+...         +..+...|+.||++.+.+++.+
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  156 (330)
T 2c20_A           81 GVSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWY  156 (330)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             cccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHH
Confidence            1134567889999999999999887    34455799999997654321         1123578999999999999999


Q ss_pred             HHhhcCCCeEEEEecchh
Q psy6113         241 AEEFKGDNIAVNALWPRT  258 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~  258 (406)
                      +.++   |++++.+.|+.
T Consensus       157 ~~~~---~~~~~ilrp~~  171 (330)
T 2c20_A          157 SQAS---NLRYKIFRYFN  171 (330)
T ss_dssp             HHTS---SCEEEEEECSE
T ss_pred             HHHh---CCcEEEEecCc
Confidence            8875   79999999864

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.74  E-value=5e-17  Score=156.86  Aligned_cols=165  Identities=16%  Similarity=0.164  Sum_probs=122.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++||||+|+||++++++|+++|++|++++|......+       ..+.+.. .+.++.++.+|++++++++++++.   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   71 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRS-------VLPVIERLGGKHPTFVEGDIRNEALMTEILHD---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTT-------HHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchh-------HHHHHHhhcCCcceEEEccCCCHHHHHHHhhc---
Confidence            58999999999999999999999999999876443221       1222222 245678889999999998887764   


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                       + ++|+||||||.....                                                              
T Consensus        72 -~-~~D~vih~A~~~~~~--------------------------------------------------------------   87 (338)
T 1udb_A           72 -H-AIDTVIHFAGLKAVG--------------------------------------------------------------   87 (338)
T ss_dssp             -T-TCSEEEECCSCCCHH--------------------------------------------------------------
T ss_pred             -c-CCCEEEECCccCccc--------------------------------------------------------------
Confidence             2 699999999964211                                                              


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------cc-CCchhhhHhhHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WF-KNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~-~~~~~Y~asKaal~~l~~~  239 (406)
                       ...+++...+++|+.+++.+++++    ++.+.++||++||...+...         +. +....|+.||++++.+++.
T Consensus        88 -~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~  162 (338)
T 1udb_A           88 -ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTD  162 (338)
T ss_dssp             -HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHH
T ss_pred             -cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHH
Confidence             122345678899999999998865    44556799999997543210         01 2367899999999999999


Q ss_pred             HHHhhcCCCeEEEEecc
Q psy6113         240 MAEEFKGDNIAVNALWP  256 (406)
Q Consensus       240 la~e~~~~gI~vn~v~P  256 (406)
                      ++.++  .++++..+.|
T Consensus       163 ~~~~~--~~~~~~ilR~  177 (338)
T 1udb_A          163 LQKAQ--PDWSIALLRY  177 (338)
T ss_dssp             HHHHS--TTCEEEEEEE
T ss_pred             HHHhc--CCCceEEEee
Confidence            99884  3677777765

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.73  E-value=4.1e-18  Score=164.53  Aligned_cols=213  Identities=16%  Similarity=0.201  Sum_probs=139.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+++||||+|+||++++++|+++|++|+++.|+.+...+.    . ....+. ...++.++.+|++|++++.++++   
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~----~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~---   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKV----S-HLLELQ-ELGDLKIFRADLTDELSFEAPIA---   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTT----H-HHHHHG-GGSCEEEEECCTTTSSSSHHHHT---
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhH----H-HHHhcC-CCCcEEEEecCCCChHHHHHHHc---
Confidence            68999999999999999999999999999988987654321    1 111222 23467888999999988776654   


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|+|||+|+....   .                                                          
T Consensus        80 ----~~D~Vih~A~~~~~---~----------------------------------------------------------   94 (338)
T 2rh8_A           80 ----GCDFVFHVATPVHF---A----------------------------------------------------------   94 (338)
T ss_dssp             ----TCSEEEEESSCCCC--------------------------------------------------------------
T ss_pred             ----CCCEEEEeCCccCC---C----------------------------------------------------------
Confidence                57999999985311   0                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-------cc------------C---Cchhh
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-------WF------------K---NHVAY  226 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-------~~------------~---~~~~Y  226 (406)
                       .  .+..+..+++|+.|++++++++.+..   +.++||++||.++..+.       +.            +   ....|
T Consensus        95 -~--~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           95 -S--EDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             -C--CCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence             0  11124578999999999999986532   24799999997531100       00            0   11159


Q ss_pred             hHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH-------HHHHH----hcCCCcc-c----------ccccCChhh
Q psy6113         227 TISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT-------AAIEM----LTGGSAD-A----------KATSRKPEI  284 (406)
Q Consensus       227 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t-------~~~~~----~~~~~~~-~----------~~~~~~pe~  284 (406)
                      +.||++.+.+++.++.+   +|+++++|.|+.+...       .....    ....... .          ...+..++|
T Consensus       169 ~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~D  245 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVED  245 (338)
T ss_dssp             TTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHH
Confidence            99999988888877654   3799999999853211       00000    1111000 0          013678999


Q ss_pred             HHHHHHHhhcCCCCCccceEEE
Q psy6113         285 MADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       285 vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      +|+++++++...  ..+|.++.
T Consensus       246 va~a~~~~~~~~--~~~~~~~~  265 (338)
T 2rh8_A          246 VCRAHIFVAEKE--SASGRYIC  265 (338)
T ss_dssp             HHHHHHHHHHCT--TCCEEEEE
T ss_pred             HHHHHHHHHcCC--CcCCcEEE
Confidence            999999998642  34566654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.73  E-value=1.5e-17  Score=158.59  Aligned_cols=197  Identities=17%  Similarity=0.112  Sum_probs=142.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +++++||||+|+||++++++|+++  |++|++++|+....        .    +.   .++.++.+|++|.+++++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------~----~~---~~~~~~~~D~~d~~~~~~~~~~   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT--------D----VV---NSGPFEVVNALDFNQIEHLVEV   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC--------H----HH---HSSCEEECCTTCHHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc--------c----cc---CCCceEEecCCCHHHHHHHHhh
Confidence            477999999999999999999999  89999999986541        0    11   1366889999999998888765


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .     ++|++||+||....                                                            
T Consensus        67 ~-----~~d~vih~a~~~~~------------------------------------------------------------   81 (312)
T 2yy7_A           67 H-----KITDIYLMAALLSA------------------------------------------------------------   81 (312)
T ss_dssp             T-----TCCEEEECCCCCHH------------------------------------------------------------
T ss_pred             c-----CCCEEEECCccCCC------------------------------------------------------------
Confidence            3     68999999996421                                                            


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------cCCchhhhHhhHHHHHH
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------FKNHVAYTISKYGMSMC  236 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------~~~~~~Y~asKaal~~l  236 (406)
                          ...+++...+++|+.++..+++++.+    .+.+++|++||...+.+..          ..+...|+.||++.+.+
T Consensus        82 ----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  153 (312)
T 2yy7_A           82 ----TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERW  153 (312)
T ss_dssp             ----HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHH
T ss_pred             ----chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHH
Confidence                11245677899999999999998843    4557999999976543310          12356899999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhh--------------HHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCC
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIY--------------TAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~--------------t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++.++.++   |++++.+.|+++..              ..+.+......      ......+...+|+|++++.++...
T Consensus       154 ~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  230 (312)
T 2yy7_A          154 CEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP  230 (312)
T ss_dssp             HHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSC
T ss_pred             HHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCc
Confidence            99998775   79999999864322              11111121111      011123456799999999988653

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.73  E-value=1.1e-17  Score=151.81  Aligned_cols=192  Identities=14%  Similarity=0.074  Sum_probs=129.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|+||++++++|+++|++|++++|+.++           ...+  ....+.++.+|++|+++         +.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----------~~~~--~~~~~~~~~~D~~d~~~---------~~   59 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK-----------AADR--LGATVATLVKEPLVLTE---------AD   59 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHH--TCTTSEEEECCGGGCCH---------HH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccc-----------cccc--cCCCceEEecccccccH---------hh
Confidence            49999999999999999999999999999997643           1111  23468889999999987         33


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                      ++++|+||||||.....                                                              .
T Consensus        60 ~~~~d~vi~~ag~~~~~--------------------------------------------------------------~   77 (224)
T 3h2s_A           60 LDSVDAVVDALSVPWGS--------------------------------------------------------------G   77 (224)
T ss_dssp             HTTCSEEEECCCCCTTS--------------------------------------------------------------S
T ss_pred             cccCCEEEECCccCCCc--------------------------------------------------------------c
Confidence            46799999999975110                                                              0


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc------------CCchhhhHhhHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF------------KNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~------------~~~~~Y~asKaal~~l~~  238 (406)
                              ..++|+.++..+++    .+++.+ ++||++||..+..+...            .....|+.+|++.+.+  
T Consensus        78 --------~~~~n~~~~~~l~~----a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~--  142 (224)
T 3h2s_A           78 --------RGYLHLDFATHLVS----LLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY--  142 (224)
T ss_dssp             --------CTHHHHHHHHHHHH----TCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH--
T ss_pred             --------hhhHHHHHHHHHHH----HHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH--
Confidence                    12356666655544    457777 99999999866543210            0157899999998854  


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcC-C----CcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTG-G----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~-~----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                        .......|++++.|.||++........+.. .    .......+..++|+|+++++++..+  ...|+.+
T Consensus       143 --~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~--~~~g~~~  210 (224)
T 3h2s_A          143 --QFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHP--TAIRDRI  210 (224)
T ss_dssp             --HHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC--CCTTSEE
T ss_pred             --HHHHhcCCCcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCc--cccCCEE
Confidence              222245789999999996432200000000 0    0011134578999999999999753  3456655

>1ikt_A Estradiol 17 beta-dehydrogenase 4; ALFA-beta fold, protein-triton X-100 complex, hydrophobic tunnel; HET: OXN; 1.75A {Homo sapiens} SCOP: d.106.1.1

Probab=99.73  E-value=4.7e-18  Score=139.80  Aligned_cols=76  Identities=36%  Similarity=0.692  Sum_probs=69.6

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhhhcCC
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL  406 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~~~~~  406 (406)
                      ...|++++++|.+.+..+..+.+|||||+++.++|.+|+.|++||++|||+|||||+||+++++||..+|+. .|||
T Consensus        45 ~~~~~l~l~nG~~~~~~g~~~~~ad~tl~~~~~~~~~l~~G~~~~~~a~~~gklki~Gd~~~~~~l~~ll~~-~~kl  120 (120)
T 1ikt_A           45 GAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKD-YAKL  120 (120)
T ss_dssp             EEEEEEEESSTTCEEEESSCSSCCSEEEEEEHHHHHHHHTTSSCHHHHHHTTSSEEEESHHHHHHHHHHHHH-HTTC
T ss_pred             ceEEEEEEEcCcEEEeeCCCCCCCCEEEEEEHHHHHHHHcCCCCHHHHHHcCCEEEECCHHHHHHHHHHHHH-hccC
Confidence            468999999999877776544688999999999999999999999999999999999999999999999998 5887

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.72  E-value=8.4e-17  Score=169.56  Aligned_cols=213  Identities=13%  Similarity=0.095  Sum_probs=149.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHH-HHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHA-VQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~-v~~~~   84 (406)
                      +++++++||||+|+||++++++|+++ |++|++++|+......+            ....++.++.+|+++.++ +++++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~------------~~~~~v~~v~~Dl~d~~~~~~~~~  380 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF------------LNHPHFHFVEGDISIHSEWIEYHV  380 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG------------TTCTTEEEEECCTTTCHHHHHHHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh------------ccCCceEEEECCCCCcHHHHHHhh
Confidence            57899999999999999999999998 89999999987653211            013468889999999765 55444


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +       ++|++|||||....                                                          
T Consensus       381 ~-------~~D~Vih~Aa~~~~----------------------------------------------------------  395 (660)
T 1z7e_A          381 K-------KCDVVLPLVAIATP----------------------------------------------------------  395 (660)
T ss_dssp             H-------HCSEEEECCCCCCT----------------------------------------------------------
T ss_pred             c-------CCCEEEECceecCc----------------------------------------------------------
Confidence            3       58999999996431                                                          


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---c-------------CCchhhhH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---F-------------KNHVAYTI  228 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---~-------------~~~~~Y~a  228 (406)
                           ....+++...+++|+.++..+++++..    .+ +++|++||...+....   .             .....|+.
T Consensus       396 -----~~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~  465 (660)
T 1z7e_A          396 -----IEYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  465 (660)
T ss_dssp             -----HHHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             -----cccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHH
Confidence                 112345677899999999999888844    34 7999999975432110   0             12237999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH-----------------HHHHHh-cCCCc------ccccccCChhh
Q psy6113         229 SKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT-----------------AAIEML-TGGSA------DAKATSRKPEI  284 (406)
Q Consensus       229 sKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t-----------------~~~~~~-~~~~~------~~~~~~~~pe~  284 (406)
                      ||.+.+.+++.++.++   |++++.+.||.+...                 .+.... .....      .....+..++|
T Consensus       466 sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D  542 (660)
T 1z7e_A          466 SKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD  542 (660)
T ss_dssp             HHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHH
T ss_pred             HHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHH
Confidence            9999999999998775   799999999854211                 111111 11110      01123567999


Q ss_pred             HHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         285 MADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       285 vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +|+++++++.......+|+++ +.+|
T Consensus       543 va~ai~~~l~~~~~~~~g~~~ni~~~  568 (660)
T 1z7e_A          543 GIEALYRIIENAGNRCDGEIINIGNP  568 (660)
T ss_dssp             HHHHHHHHHHCGGGTTTTEEEEECCG
T ss_pred             HHHHHHHHHhCccccCCCeEEEECCC
Confidence            999999998764444567766 5544

>2cx7_A Sterol carrier protein 2; sterol transfer, SCP-2, RSGI, structural genomics, NPPSFA; 1.75A {Thermus thermophilus} PDB: 1wfr_A

Probab=99.72  E-value=3.7e-18  Score=141.99  Aligned_cols=73  Identities=21%  Similarity=0.335  Sum_probs=64.1

Q ss_pred             CcceEEeccCCCcccccCCCCCC-CceEEEeeHHhHHHHHcCCCCchhhhhccCcee-ecCHHHHhhHHHHHHhh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSST-VDATLTMTEKNFIALFEGKLKPTSAFMTGKLKI-SGNLQKAMKLEKLMGAL  402 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~-~g~~~~a~~~~~~~~~~  402 (406)
                      ...|++++++|.|..++...+.+ |||||+++++||.+|++|++||++|||+||||| +|||++|||+.+.+..+
T Consensus        48 ~~~~~l~l~~G~~~~~~~~~~~~~~d~tl~~~~e~~~~~~~G~~~~~~afm~GkLKi~~Gdm~~amk~~~a~~~~  122 (130)
T 2cx7_A           48 GVAVVLDLWHGACRGAKAVEGEAEADFVIEADLATWQEVLEGRLEPLSALMRGLLELKKGTIAALAPYAQAAQEL  122 (130)
T ss_dssp             CEEEEEEEETTEEEEEEEEESCCCCSEEEEECHHHHHHHTTTSSCHHHHHHHTSSEEEESCHHHHGGGHHHHHHH
T ss_pred             CceEEEEEeCCEEEEccccCCCCCCCEEEEEcHHHHHHHHcCCCCHHHHHHcCCceeccCCHHHHHHhHHHHHHH
Confidence            45899999999986554322345 899999999999999999999999999999999 99999999999988754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.72  E-value=2.9e-17  Score=155.24  Aligned_cols=194  Identities=17%  Similarity=0.199  Sum_probs=135.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .-++++||||+|+||++++++|+++|++|++++|+                            .+|++|.+++.++++..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~Dl~d~~~~~~~~~~~   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------------DLDITNVLAVNKFFNEK   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------------TCCTTCHHHHHHHHHHH
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------------cCCCCCHHHHHHHHHhc
Confidence            46899999999999999999999999999999885                            25999999998887754


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++|||||....                                                             
T Consensus        63 -----~~d~vih~A~~~~~-------------------------------------------------------------   76 (292)
T 1vl0_A           63 -----KPNVVINCAAHTAV-------------------------------------------------------------   76 (292)
T ss_dssp             -----CCSEEEECCCCCCH-------------------------------------------------------------
T ss_pred             -----CCCEEEECCccCCH-------------------------------------------------------------
Confidence                 79999999996421                                                             


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~  238 (406)
                        +.+.+++...+++|+.++.++++++.+    .+ .+||++||...+.+..         ..+...|+.+|++.+.+++
T Consensus        77 --~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~  149 (292)
T 1vl0_A           77 --DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVK  149 (292)
T ss_dssp             --HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             --HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence              223466788999999999999999855    34 3999999976543311         1135689999999999998


Q ss_pred             HHHHhhcCCCeEEEEecchh--hhhHHHHHHhc-CCCc----ccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         239 GMAEEFKGDNIAVNALWPRT--AIYTAAIEMLT-GGSA----DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~--~~~t~~~~~~~-~~~~----~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      .++.++  ..||.+.|. |.  -....+..... ....    .....+..++|+|++++++++..    +|+.+ +.++
T Consensus       150 ~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~~~~~~i~~~  221 (292)
T 1vl0_A          150 ALNPKY--YIVRTAWLY-GDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK----NYGTFHCTCK  221 (292)
T ss_dssp             HHCSSE--EEEEECSEE-SSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT----CCEEEECCCB
T ss_pred             hhCCCe--EEEeeeeee-CCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC----CCcEEEecCC
Confidence            876542  235555554 21  00111112111 1110    11234567999999999999763    45544 4443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.71  E-value=6.7e-17  Score=146.07  Aligned_cols=191  Identities=12%  Similarity=0.055  Sum_probs=124.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|+||++++++|+++|++|++++|+.++           ...+.   ..+.++.+|++|+++         +.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----------~~~~~---~~~~~~~~D~~d~~~---------~~   58 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK-----------ITQTH---KDINILQKDIFDLTL---------SD   58 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH-----------HHHHC---SSSEEEECCGGGCCH---------HH
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh-----------hhhcc---CCCeEEeccccChhh---------hh
Confidence            48999999999999999999999999999998653           11121   467889999999987         23


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                      ++++|+||||||....                                                                
T Consensus        59 ~~~~d~vi~~ag~~~~----------------------------------------------------------------   74 (221)
T 3ew7_A           59 LSDQNVVVDAYGISPD----------------------------------------------------------------   74 (221)
T ss_dssp             HTTCSEEEECCCSSTT----------------------------------------------------------------
T ss_pred             hcCCCEEEECCcCCcc----------------------------------------------------------------
Confidence            4679999999996311                                                                


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCcc----------CCchhhhHhhHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWF----------KNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~----------~~~~~Y~asKaal~~l~~~l  240 (406)
                              ..++|+.+    ++.+++.+++.+.+++|++||..++.+...          .....|+.+|.+.+.+. .+
T Consensus        75 --------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~  141 (221)
T 3ew7_A           75 --------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLE-HL  141 (221)
T ss_dssp             --------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHH-HH
T ss_pred             --------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHH-HH
Confidence                    01234444    444555567777789999999887654211          12356999999988863 22


Q ss_pred             HHhhcCCCeEEEEecchhhhhH-HHHHHhcCCC-----cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYT-AAIEMLTGGS-----ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t-~~~~~~~~~~-----~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ..  ...|++++.|.||++... .....+....     ......+..++|+|++++.++..+  ...|+.+
T Consensus       142 ~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~--~~~g~~~  208 (221)
T 3ew7_A          142 KS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERP--NHLNEHF  208 (221)
T ss_dssp             HT--TTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSC--SCTTSEE
T ss_pred             Hh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCc--cccCCEE
Confidence            22  156899999999965432 1111111000     011134678999999999999753  2445555

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.70  E-value=4.3e-16  Score=148.73  Aligned_cols=199  Identities=15%  Similarity=0.100  Sum_probs=141.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++++||||+|.||++++++|+++|++|++++|+....           . +.    ++.++.+|++ .+++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~-~~----~~~~~~~Dl~-~~~~~~~~~---   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------A-IN----DYEYRVSDYT-LEDLINQLN---   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------CCEEEECCCC-HHHHHHHTT---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-----------c-CC----ceEEEEcccc-HHHHHHhhc---
Confidence            37899999999999999999999999999999983321           1 11    5788999999 888776654   


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++||+||.....                                                             
T Consensus        62 ----~~d~Vih~a~~~~~~-------------------------------------------------------------   76 (311)
T 3m2p_A           62 ----DVDAVVHLAATRGSQ-------------------------------------------------------------   76 (311)
T ss_dssp             ----TCSEEEECCCCCCSS-------------------------------------------------------------
T ss_pred             ----CCCEEEEccccCCCC-------------------------------------------------------------
Confidence                799999999965321                                                             


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~~  239 (406)
                            ++...+++|+.++..+++++    ++.+-.+||++||...+....         ..+...|+.+|.+.+.+++.
T Consensus        77 ------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  146 (311)
T 3m2p_A           77 ------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNI  146 (311)
T ss_dssp             ------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Confidence                  34457788999999988887    445557899999965543210         12346899999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhh---------HHHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcCCCCCccce
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIY---------TAAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSSNPPSLTGQ  303 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~---------t~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~  303 (406)
                      ++.+   .|++++.+.|+.+..         ..+.........       .....+...+|+|+++++++....   .|+
T Consensus       147 ~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~  220 (311)
T 3m2p_A          147 YSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK---VSG  220 (311)
T ss_dssp             HHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT---CCE
T ss_pred             HHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC---CCC
Confidence            8875   479999999974321         122222222111       111234578999999999987643   444


Q ss_pred             EE-Eeh
Q psy6113         304 FL-IDD  308 (406)
Q Consensus       304 ~i-~d~  308 (406)
                      .+ +.+
T Consensus       221 ~~~i~~  226 (311)
T 3m2p_A          221 TFNIGS  226 (311)
T ss_dssp             EEEECC
T ss_pred             eEEeCC
Confidence            44 443

>1c44_A Protein (sterol carrier protein 2); non specific lipid transfer protein, fatty acid binding, fatty acyl COA binding, lipid binding protein; 1.80A {Oryctolagus cuniculus} SCOP: d.106.1.1 PDB: 1qnd_A 2c0l_B

Probab=99.70  E-value=9.7e-18  Score=138.54  Aligned_cols=77  Identities=44%  Similarity=0.726  Sum_probs=70.8

Q ss_pred             CCcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhh-hcCC
Q psy6113         329 AEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL-KSKL  406 (406)
Q Consensus       329 ~~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~-~~~~  406 (406)
                      ..+.|++++++|.+.+.++. .++|||||+++.++|.+|+.|++||++|||+|||||+||+++++||..+|+.. ||||
T Consensus        46 ~~~~~~l~l~ng~l~~~~~~-~~~ad~tlt~~~~~~~~l~~g~~~~~~a~~~gklki~Gd~~~~~~l~~ll~~~~~~kl  123 (123)
T 1c44_A           46 KEATWVVDVKNGKGSVLPNS-DKKADCTITMADSDLLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQNLQLQPGKAKL  123 (123)
T ss_dssp             CCEEEEEEESSTTCEEEETC-CCCCSEEEEEEHHHHHHHHTTSSCHHHHHHTTCCEEEECHHHHHHHHTTCSSCCCCCC
T ss_pred             cceEEEEEEeCCcEEEecCC-CCCCCEEEEEEHHHHHHHHcCCCCHHHHHHcCCEEEeCCHHHHHHHHHHhcccccCCC
Confidence            45799999999999877664 45789999999999999999999999999999999999999999999999866 8997

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.69  E-value=2.6e-16  Score=166.88  Aligned_cols=174  Identities=13%  Similarity=0.103  Sum_probs=127.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ++.+++|+++||||+|+||++++++|+++|++|++++|+.....+       ..+.+.. .+.++.++.+|+++++++++
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~l~~~~~~~v~~v~~Dl~d~~~l~~   78 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYD-------SVARLEVLTKHHIPFYEVDLCDRKGLEK   78 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTH-------HHHHHHHHHTSCCCEEECCTTCHHHHHH
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHH-------HHHHHhhccCCceEEEEcCCCCHHHHHH
Confidence            456789999999999999999999999999999999997654321       1222222 24567889999999999888


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++..     ++|+||||||......                                                      
T Consensus        79 ~~~~~-----~~D~Vih~A~~~~~~~------------------------------------------------------   99 (699)
T 1z45_A           79 VFKEY-----KIDSVIHFAGLKAVGE------------------------------------------------------   99 (699)
T ss_dssp             HHHHS-----CCCEEEECCSCCCHHH------------------------------------------------------
T ss_pred             HHHhC-----CCCEEEECCcccCcCc------------------------------------------------------
Confidence            77643     7999999999643210                                                      


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-------------ccCCchhhhHh
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-------------WFKNHVAYTIS  229 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-------------~~~~~~~Y~as  229 (406)
                               ..+.....+++|+.++..+++++    ++.+.++||++||...+...             +..+...|+.|
T Consensus       100 ---------~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~s  166 (699)
T 1z45_A          100 ---------STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHT  166 (699)
T ss_dssp             ---------HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHH
T ss_pred             ---------cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHH
Confidence                     11223567899999999987765    45556799999997643210             01234689999


Q ss_pred             hHHHHHHHHHHHHhhcCCCeEEEEecch
Q psy6113         230 KYGMSMCALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       230 Kaal~~l~~~la~e~~~~gI~vn~v~PG  257 (406)
                      |++++.+++.++.+. +.|+++..+.|+
T Consensus       167 K~~~E~~~~~~~~~~-~~g~~~~ilR~~  193 (699)
T 1z45_A          167 KYAIENILNDLYNSD-KKSWKFAILRYF  193 (699)
T ss_dssp             HHHHHHHHHHHHHHS-TTSCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhc-cCCCcEEEEEec
Confidence            999999999998875 457888888864

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.69  E-value=3.9e-16  Score=149.13  Aligned_cols=191  Identities=16%  Similarity=0.135  Sum_probs=137.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++||||+|+||++++++|+++  |++|++++|+.....                  .+.++.+|++|++++.+++++  
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------------~~~~~~~D~~d~~~~~~~~~~--   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------------GIKFITLDVSNRDEIDRAVEK--   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------------TCCEEECCTTCHHHHHHHHHH--
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------------CceEEEecCCCHHHHHHHHhh--
Confidence            3899999999999999999999  899999998765321                  356788999999998888764  


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                         .++|++||+||....                                                              
T Consensus        61 ---~~~d~vih~a~~~~~--------------------------------------------------------------   75 (317)
T 3ajr_A           61 ---YSIDAIFHLAGILSA--------------------------------------------------------------   75 (317)
T ss_dssp             ---TTCCEEEECCCCCHH--------------------------------------------------------------
T ss_pred             ---cCCcEEEECCcccCC--------------------------------------------------------------
Confidence               279999999996421                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------cCCchhhhHhhHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------FKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------~~~~~~Y~asKaal~~l~~  238 (406)
                        ...+++...+++|+.++.++++++.    +.+.++||++||...+.+..          ..+...|+.||++.+.+++
T Consensus        76 --~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~  149 (317)
T 3ajr_A           76 --KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQ  149 (317)
T ss_dssp             --HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHH
T ss_pred             --ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHH
Confidence              1124567789999999999999874    34557999999987654310          1135789999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhH--------------HHHHHhcCCCc------ccccccCChhhHHHHHHHhhcC
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYT--------------AAIEMLTGGSA------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t--------------~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      .++.++   |++++.+.|+.+..+              .+.+.......      .....+...+|+|++++.++..
T Consensus       150 ~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  223 (317)
T 3ajr_A          150 YYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEA  223 (317)
T ss_dssp             HHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHC
T ss_pred             HHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhC
Confidence            888764   789999875322221              11122221110      1112234679999999888754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.69  E-value=4.2e-16  Score=150.81  Aligned_cols=201  Identities=13%  Similarity=0.043  Sum_probs=136.7

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ...+++++++||||+|+||++++++|+++|++|++++|+.....+.   +    ..+. ...++.++.+|+++..     
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~----~~~~-~~~~~~~~~~D~~~~~-----   88 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---V----EHWI-GHENFELINHDVVEPL-----   88 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---T----GGGT-TCTTEEEEECCTTSCC-----
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---h----hhhc-cCCceEEEeCccCChh-----
Confidence            3567889999999999999999999999999999999975432110   0    0110 1346788899998752     


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                             +.++|+|||+||......                                                       
T Consensus        89 -------~~~~d~vih~A~~~~~~~-------------------------------------------------------  106 (343)
T 2b69_A           89 -------YIEVDQIYHLASPASPPN-------------------------------------------------------  106 (343)
T ss_dssp             -------CCCCSEEEECCSCCSHHH-------------------------------------------------------
T ss_pred             -------hcCCCEEEECccccCchh-------------------------------------------------------
Confidence                   467999999999643210                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC--------------CccCCchhhhHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP--------------FWFKNHVAYTIS  229 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~--------------~~~~~~~~Y~as  229 (406)
                              ..+++...+++|+.++.++++++..    .+ .++|++||...+..              .+......|+.|
T Consensus       107 --------~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~s  173 (343)
T 2b69_A          107 --------YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEG  173 (343)
T ss_dssp             --------HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHH
T ss_pred             --------hhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHH
Confidence                    1134567889999999999998854    33 49999999754321              012345679999


Q ss_pred             hHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH-----------HHHH-HhcCCCc------ccccccCChhhHHHHHHH
Q psy6113         230 KYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT-----------AAIE-MLTGGSA------DAKATSRKPEIMADAAYY  291 (406)
Q Consensus       230 Kaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t-----------~~~~-~~~~~~~------~~~~~~~~pe~vA~~v~~  291 (406)
                      |++.+.+++.++.++   |++++.+.||.+...           .+.. .......      .....+..++|+|+++++
T Consensus       174 K~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  250 (343)
T 2b69_A          174 KRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  250 (343)
T ss_dssp             HHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence            999999999998775   799999999743211           1111 1111111      112235578999999999


Q ss_pred             hhcC
Q psy6113         292 ILSS  295 (406)
Q Consensus       292 L~s~  295 (406)
                      ++..
T Consensus       251 ~~~~  254 (343)
T 2b69_A          251 LMNS  254 (343)
T ss_dssp             HHTS
T ss_pred             HHhc
Confidence            9865

>3bkr_A Sterol carrier protein-2 like-3; mosquito, fatty acid, palmitic acid, cholesterol, lipid binding protein; HET: PLM; 1.40A {Aedes aegypti} PDB: 3bks_A*

Probab=99.68  E-value=2.2e-17  Score=136.80  Aligned_cols=71  Identities=20%  Similarity=0.266  Sum_probs=62.4

Q ss_pred             CCcceEEeccCCCcc--------cccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHH
Q psy6113         329 AEGSWHIDLKTGSGS--------SGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMG  400 (406)
Q Consensus       329 ~~g~w~~dlk~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~  400 (406)
                      ....|++++++|.+.        ..++. .++|||||+|+++||.+|++|++||++|||+|||||+|||++|+||..+|+
T Consensus        46 ~~~~~~l~l~ng~l~~~~~~~~~~~~g~-~~~ad~tlt~~~~d~~~l~~G~l~~~~a~~~Gklki~Gd~~~a~kL~~~f~  124 (126)
T 3bkr_A           46 VVRSVVLDFNDLKISEIELAVTSTADYP-AERIDASITIDDNDFYLVATKETSFAALIEQGKVDITGNKQAFLTLDEKFR  124 (126)
T ss_dssp             EEEEEEEETTTTEEEEESTTCSCCSSSC-GGGCCEEEEEEHHHHHHHHTTSSCHHHHHHTTCCEEEECHHHHHHHHHHHT
T ss_pred             ceEEEEEEeeCCEEEeeecccccccCCC-CCCCCEEEEEeHHHHHHHHcCCCCHHHHHHcCCEEEEcCHHHHHHHhhhhc
Confidence            346899999998754        22443 357899999999999999999999999999999999999999999999995

>1pz4_A Sterol carrier protein 2; alpha and beta, lipid binding protein; HET: PLM; 1.35A {Aedes aegypti} SCOP: d.106.1.1 PDB: 2ksh_A 2ksi_A*

Probab=99.68  E-value=1.5e-17  Score=135.91  Aligned_cols=70  Identities=27%  Similarity=0.429  Sum_probs=63.0

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhhh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALK  403 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~~  403 (406)
                      ...|++++++|..  .++. . +|||||+++++||.+|+.|++||++|||+|||||+||+++++||.++|+.+|
T Consensus        47 ~~~~~l~l~nG~~--~~g~-~-~ad~tlt~~~~~~~~l~~G~~~~~~a~~~Gklki~Gd~~~~~kl~~ll~~~~  116 (116)
T 1pz4_A           47 VKNWVMDLKNVKL--VESD-D-AAEATLTMEDDIMFAIGTGALPAKEAMAQDKMEVDGQVELIFLLEPFIASLK  116 (116)
T ss_dssp             EEEEEEETTTTEE--EECC-C-CCSEEEEEEHHHHHHHHTTSSCHHHHHHTTSEEEEESGGGGGGGGGGGGGCC
T ss_pred             eEEEEEEecCCeE--EcCC-C-CCCEEEEEEHHHHHHHHcCCCCHHHHHHcCCEEEECCHHHHHHHHHHHhhcC
Confidence            3689999999875  4444 3 8899999999999999999999999999999999999999999999998753

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.67  E-value=6.8e-17  Score=153.72  Aligned_cols=197  Identities=15%  Similarity=0.121  Sum_probs=135.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++||||+|+||++++++|+++| ++|++++|+.....         ...+.  +  +. +.+|+++.+.++++++..  
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---------~~~~~--~--~~-~~~d~~~~~~~~~~~~~~--   64 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------FVNLV--D--LN-IADYMDKEDFLIQIMAGE--   64 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---------GHHHH--T--SC-CSEEEEHHHHHHHHHTTC--
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch---------hhhcC--c--ce-eccccccHHHHHHHHhcc--
Confidence            38999999999999999999999 89999998765311         11121  1  22 678999988877765421  


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .++++|++||+||....                                                               
T Consensus        65 ~~~~~d~vi~~a~~~~~---------------------------------------------------------------   81 (310)
T 1eq2_A           65 EFGDVEAIFHEGACSST---------------------------------------------------------------   81 (310)
T ss_dssp             CCSSCCEEEECCSCCCT---------------------------------------------------------------
T ss_pred             ccCCCcEEEECcccccC---------------------------------------------------------------
Confidence            02369999999996432                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~~l  240 (406)
                        +.+++...+++|+.++..+++++.+    .+. ++|++||...+....         ..+...|+.||.+.+.+++.+
T Consensus        82 --~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~  154 (310)
T 1eq2_A           82 --TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQI  154 (310)
T ss_dssp             --TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred             --cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Confidence              2234677889999999999998854    344 999999975432210         012568999999999999998


Q ss_pred             HHhhcCCCeEEEEecchhhhhH-------------HHHHHhcCCC-------ccc-ccccCChhhHHHHHHHhhcCC
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYT-------------AAIEMLTGGS-------ADA-KATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t-------------~~~~~~~~~~-------~~~-~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +.+   .|++++.+.||++...             .+........       ... ...+...+|+|+++++++...
T Consensus       155 ~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~  228 (310)
T 1eq2_A          155 LPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG  228 (310)
T ss_dssp             GGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred             HHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC
Confidence            876   4799999999753221             1111111111       011 224467899999999998753

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.67  E-value=4.4e-16  Score=146.73  Aligned_cols=188  Identities=17%  Similarity=0.137  Sum_probs=133.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|+||++++++|+++|++|++++|.                            .+|++|.+++.++++..   
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~D~~d~~~~~~~~~~~---   55 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------------LLDITNISQVQQVVQEI---   55 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------------TSCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------------ccCCCCHHHHHHHHHhc---
Confidence            79999999999999999999999999999882                            25999999998888765   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||+||....                                                               .
T Consensus        56 --~~d~vi~~a~~~~~---------------------------------------------------------------~   70 (287)
T 3sc6_A           56 --RPHIIIHCAAYTKV---------------------------------------------------------------D   70 (287)
T ss_dssp             --CCSEEEECCCCCCH---------------------------------------------------------------H
T ss_pred             --CCCEEEECCcccCh---------------------------------------------------------------H
Confidence              78999999997532                                                               1


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~la  241 (406)
                      ...+++...+++|+.++..+++++.+    .+ .+||++||...+.+.         +..+...|+.+|.+.+.+++.++
T Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  145 (287)
T 3sc6_A           71 QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELH  145 (287)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence            22356788999999999999998843    33 489999997654321         01235689999999999998876


Q ss_pred             HhhcCCCeEEEEecchhhhh-------HHHHHHhcCCCcc-----cccccCChhhHHHHHHHhhcCCCCCccceEEEehh
Q psy6113         242 EEFKGDNIAVNALWPRTAIY-------TAAIEMLTGGSAD-----AKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDE  309 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~-------t~~~~~~~~~~~~-----~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~g  309 (406)
                      .+       ++.+.|+.+..       ..+.+........     ....+..++|+|+++++++....   +|.+.+.++
T Consensus       146 ~~-------~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~  215 (287)
T 3sc6_A          146 NK-------YFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL---YGTYHVSNT  215 (287)
T ss_dssp             SS-------EEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC---CEEEECCCB
T ss_pred             CC-------cEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC---CCeEEEcCC
Confidence            53       34555553211       1122222211111     11234569999999999997643   554444443

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.65  E-value=8.6e-16  Score=146.00  Aligned_cols=202  Identities=12%  Similarity=0.068  Sum_probs=138.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..|++++++||||+|+||++++++|+++|+      +....                  ...+..+.+|++|++++.+++
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------------~~~~~~~~~D~~d~~~~~~~~   57 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------------WVFVSSKDADLTDTAQTRALF   57 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------------EEECCTTTCCTTSHHHHHHHH
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------------ccccCceecccCCHHHHHHHH
Confidence            357789999999999999999999999998      11110                  123555678999999998887


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..     ++|++||+||.....                                                         
T Consensus        58 ~~~-----~~d~Vih~A~~~~~~---------------------------------------------------------   75 (319)
T 4b8w_A           58 EKV-----QPTHVIHLAAMVGGL---------------------------------------------------------   75 (319)
T ss_dssp             HHS-----CCSEEEECCCCCCCH---------------------------------------------------------
T ss_pred             hhc-----CCCEEEECceecccc---------------------------------------------------------
Confidence            752     699999999974210                                                         


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------ccCCchhhhHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------WFKNHVAYTISK  230 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------~~~~~~~Y~asK  230 (406)
                           ..+.++....+++|+.++.++++++    ++.+-.++|++||...+...              ..+....|+.||
T Consensus        76 -----~~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  146 (319)
T 4b8w_A           76 -----FRNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAK  146 (319)
T ss_dssp             -----HHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHH
T ss_pred             -----cccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHH
Confidence                 1223445678899999999998887    44455699999998654221              012223699999


Q ss_pred             HHHHHHHHHHHHhhcCCCeEEEEecchhhhhH-------------HHHHH-----hcCCCc------ccccccCChhhHH
Q psy6113         231 YGMSMCALGMAEEFKGDNIAVNALWPRTAIYT-------------AAIEM-----LTGGSA------DAKATSRKPEIMA  286 (406)
Q Consensus       231 aal~~l~~~la~e~~~~gI~vn~v~PG~~~~t-------------~~~~~-----~~~~~~------~~~~~~~~pe~vA  286 (406)
                      .+.+.+++.++.+.   |++++.+.|+.+...             .+...     ......      .....+...+|+|
T Consensus       147 ~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  223 (319)
T 4b8w_A          147 RMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLA  223 (319)
T ss_dssp             HHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHH
Confidence            99999999998875   789988888743211             11121     111111      1112345789999


Q ss_pred             HHHHHhhcCCCCCccceEE
Q psy6113         287 DAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       287 ~~v~~L~s~~~~~~tG~~i  305 (406)
                      ++++.++..... ..|+.+
T Consensus       224 ~a~~~~~~~~~~-~~~~~~  241 (319)
T 4b8w_A          224 QLFIWVLREYNE-VEPIIL  241 (319)
T ss_dssp             HHHHHHHHHCCC-SSCEEE
T ss_pred             HHHHHHHhcccc-CCceEE
Confidence            999999865322 344444

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.65  E-value=2.3e-16  Score=148.77  Aligned_cols=196  Identities=14%  Similarity=0.065  Sum_probs=134.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++++||| +|+||++++++|+++|++|++++|+.+..                 ..++.++.+|++|.+++.++++  
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------~~~~~~~~~Dl~d~~~~~~~~~--   61 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------------PAGVQTLIADVTRPDTLASIVH--   61 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------------CTTCCEEECCTTCGGGCTTGGG--
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------ccCCceEEccCCChHHHHHhhc--
Confidence            457899999 59999999999999999999999987652                 2357889999999998777654  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                          +++|++||+||...                                                              
T Consensus        62 ----~~~d~vih~a~~~~--------------------------------------------------------------   75 (286)
T 3gpi_A           62 ----LRPEILVYCVAASE--------------------------------------------------------------   75 (286)
T ss_dssp             ----GCCSEEEECHHHHH--------------------------------------------------------------
T ss_pred             ----CCCCEEEEeCCCCC--------------------------------------------------------------
Confidence                36999999998531                                                              


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~  238 (406)
                            .++...+++|+.++..+++++.    +.+.+++|++||...+....         ..+...|+.+|.+.+.+ +
T Consensus        76 ------~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~  144 (286)
T 3gpi_A           76 ------YSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-L  144 (286)
T ss_dssp             ------HC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-G
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-H
Confidence                  2235567889999999988884    45557999999976543210         12356899999998888 5


Q ss_pred             HHHHhhcCCCeEEEEecchhhhh---HHHHHHhcC----CCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIY---TAAIEMLTG----GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~---t~~~~~~~~----~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      ..        ++++.+.|+++..   +.+...+..    ........+..++|+|+++++++........|+.+ +.+
T Consensus       145 ~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~  214 (286)
T 3gpi_A          145 AA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTD  214 (286)
T ss_dssp             GG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             hc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeC
Confidence            53        6777888764321   223233322    11112223457899999999998753222334444 443

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.65  E-value=1.3e-15  Score=145.63  Aligned_cols=187  Identities=12%  Similarity=0.079  Sum_probs=135.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++++||||+|+||++++++|+++|++|++++|+.                           .+|++|.+++.++++..
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------~~D~~d~~~~~~~~~~~   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFASE   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------cCCccCHHHHHHHHHhc
Confidence            468899999999999999999999999999887652                           25999999988887754


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++||+||.....                                                            
T Consensus        55 -----~~d~vih~a~~~~~~------------------------------------------------------------   69 (321)
T 1e6u_A           55 -----RIDQVYLAAAKVGGI------------------------------------------------------------   69 (321)
T ss_dssp             -----CCSEEEECCCCCCCH------------------------------------------------------------
T ss_pred             -----CCCEEEEcCeecCCc------------------------------------------------------------
Confidence                 699999999964210                                                            


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------ccCCchhhhHhhHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------WFKNHVAYTISKYGM  233 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------~~~~~~~Y~asKaal  233 (406)
                        ....+++...+++|+.++..+++++..    .+..++|++||...+...              ..+....|+.+|.+.
T Consensus        70 --~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  143 (321)
T 1e6u_A           70 --VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  143 (321)
T ss_dssp             --HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             --chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence              112345677889999999999988743    445699999997654211              011235899999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhH-------------HHHHHhc-----C-CC------cccccccCChhhHHHH
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYT-------------AAIEMLT-----G-GS------ADAKATSRKPEIMADA  288 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t-------------~~~~~~~-----~-~~------~~~~~~~~~pe~vA~~  288 (406)
                      +.+++.++.++   |++++.+.||++...             .+.....     . ..      ......+...+|+|++
T Consensus       144 E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~  220 (321)
T 1e6u_A          144 IKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  220 (321)
T ss_dssp             HHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHH
Confidence            99999998765   799999999753221             1111111     0 00      0112234578999999


Q ss_pred             HHHhhcC
Q psy6113         289 AYYILSS  295 (406)
Q Consensus       289 v~~L~s~  295 (406)
                      ++.++..
T Consensus       221 ~~~~~~~  227 (321)
T 1e6u_A          221 SIHVMEL  227 (321)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhC
Confidence            9998864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.64  E-value=2.1e-15  Score=141.90  Aligned_cols=188  Identities=14%  Similarity=0.109  Sum_probs=133.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      |+++||||+|+||++++++|+++  |++|++++|+.++..           .+..  ..+.++.+|++|++++.++++  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~l~~--~~~~~~~~D~~d~~~l~~~~~--   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-----------TLAD--QGVEVRHGDYNQPESLQKAFA--   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-----------HHHH--TTCEEEECCTTCHHHHHHHTT--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-----------HHhh--cCCeEEEeccCCHHHHHHHHh--
Confidence            46999999999999999999999  999999999865421           1222  246788999999988777654  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++||+||..     .                                                         
T Consensus        66 -----~~d~vi~~a~~~-----~---------------------------------------------------------   78 (287)
T 2jl1_A           66 -----GVSKLLFISGPH-----Y---------------------------------------------------------   78 (287)
T ss_dssp             -----TCSEEEECCCCC-----S---------------------------------------------------------
T ss_pred             -----cCCEEEEcCCCC-----c---------------------------------------------------------
Confidence                 589999999841     0                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                        +   +      ++|+.++.++++++    ++.+-++||++||.....     ....|+.+|.+.+.+.+.       .
T Consensus        79 --~---~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~-----~~~~y~~~K~~~E~~~~~-------~  131 (287)
T 2jl1_A           79 --D---N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE-----SIIPLAHVHLATEYAIRT-------T  131 (287)
T ss_dssp             --C---H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG-----CCSTHHHHHHHHHHHHHH-------T
T ss_pred             --C---c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC-----CCCchHHHHHHHHHHHHH-------c
Confidence              1   0      46888888888777    445557999999987642     224799999999988753       5


Q ss_pred             CeEEEEecchhhhhHHH-H----HHhcCC-----CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         248 NIAVNALWPRTAIYTAA-I----EMLTGG-----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~-~----~~~~~~-----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |++++.+.||++ .+.. .    ......     .......+..++|+|+++++++..+.  .+|+.+ +.++
T Consensus       132 ~~~~~ilrp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~  201 (287)
T 2jl1_A          132 NIPYTFLRNALY-TDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HENKTYNLVSN  201 (287)
T ss_dssp             TCCEEEEEECCB-HHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTEEEEECCS
T ss_pred             CCCeEEEECCEe-ccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCcEEEecCC
Confidence            899999999853 3322 1    111000     01122345689999999999987532  367665 5443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.63  E-value=7.6e-16  Score=147.05  Aligned_cols=204  Identities=13%  Similarity=0.022  Sum_probs=133.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC----CCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP----HPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~----~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      ++.+++++||||+|+||++++++|+++|++|++++|+...    ...+...         .....+.++.+|++      
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~~Dl~------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKF---------LEKPVLELEERDLS------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEE---------ECSCGGGCCHHHHT------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhh---------ccCCCeeEEeCccc------
Confidence            4678999999999999999999999999999999998762    1111000         01234556666665      


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                                 ++|++||+||.......                                                    
T Consensus        69 -----------~~d~vi~~a~~~~~~~~----------------------------------------------------   85 (321)
T 3vps_A           69 -----------DVRLVYHLASHKSVPRS----------------------------------------------------   85 (321)
T ss_dssp             -----------TEEEEEECCCCCCHHHH----------------------------------------------------
T ss_pred             -----------cCCEEEECCccCChHHH----------------------------------------------------
Confidence                       79999999997542111                                                    


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYG  232 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaa  232 (406)
                                 .++....++ |+.++.++++++.    +.+-.+||++||...+...         +..+...|+.+|.+
T Consensus        86 -----------~~~~~~~~~-n~~~~~~ll~a~~----~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~  149 (321)
T 3vps_A           86 -----------FKQPLDYLD-NVDSGRHLLALCT----SVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVG  149 (321)
T ss_dssp             -----------TTSTTTTHH-HHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             -----------HhCHHHHHH-HHHHHHHHHHHHH----HcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence                       111223455 9999999888873    4445799999997644321         01235789999999


Q ss_pred             HHHHHHHHHHhhcCCCe-EEEEecchhhhhH---------HHHHHhcCCC-------cccccccCChhhHHHHHHHhhcC
Q psy6113         233 MSMCALGMAEEFKGDNI-AVNALWPRTAIYT---------AAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI-~vn~v~PG~~~~t---------~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      .+.+++.++.+.   |+ +++.+.|+++...         .+........       ......+..++|+|+++++++..
T Consensus       150 ~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~  226 (321)
T 3vps_A          150 LEMVAGAHQRAS---VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANR  226 (321)
T ss_dssp             HHHHHHHHHHSS---SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHc---CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhc
Confidence            999999998764   78 9999988743211         1111111110       11122345789999999999976


Q ss_pred             CCCCccceEEEehh
Q psy6113         296 NPPSLTGQFLIDDE  309 (406)
Q Consensus       296 ~~~~~tG~~i~d~g  309 (406)
                      ...   |.+.+.+|
T Consensus       227 ~~~---g~~~i~~~  237 (321)
T 3vps_A          227 PLP---SVVNFGSG  237 (321)
T ss_dssp             CCC---SEEEESCS
T ss_pred             CCC---CeEEecCC
Confidence            443   63335443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.63  E-value=1.1e-15  Score=144.82  Aligned_cols=180  Identities=13%  Similarity=0.129  Sum_probs=128.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +++||||+|+||++++++|+ +|++|++++|+..                        ++.+|++|.+++.++++..   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------------~~~~D~~d~~~~~~~~~~~---   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------------EFCGDFSNPKGVAETVRKL---   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------------SSCCCTTCHHHHHHHHHHH---
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------------cccccCCCHHHHHHHHHhc---
Confidence            58999999999999999999 8999999998752                        3568999999988887754   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||+||....                                                               .
T Consensus        54 --~~d~vih~a~~~~~---------------------------------------------------------------~   68 (299)
T 1n2s_A           54 --RPDVIVNAAAHTAV---------------------------------------------------------------D   68 (299)
T ss_dssp             --CCSEEEECCCCCCH---------------------------------------------------------------H
T ss_pred             --CCCEEEECcccCCH---------------------------------------------------------------h
Confidence              68999999996431                                                               1


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~~la  241 (406)
                      .+.+++...+++|+.++.++++++.    +.+ .++|++||...+.+..         ..+...|+.+|.+.+.+++.++
T Consensus        69 ~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  143 (299)
T 1n2s_A           69 KAESEPELAQLLNATSVEAIAKAAN----ETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNC  143 (299)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHT----TTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHC
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhC
Confidence            1234567788999999999999884    333 4899999976543210         1225689999999999988764


Q ss_pred             HhhcCCCeEEEEecchhhhh-------HHHHHHhcCCCc-----ccccccCChhhHHHHHHHhhcC
Q psy6113         242 EEFKGDNIAVNALWPRTAIY-------TAAIEMLTGGSA-----DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~-------t~~~~~~~~~~~-----~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      .       +++.+.|+++..       ..+.........     .....+..++|+|+++++++..
T Consensus       144 ~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          144 P-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             S-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             C-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence            3       677788875321       112222111110     0112344689999999999865

>2qzt_A Sterol carrier protein 2-like 2; mosquito, fatty acid, palmitic acid, cholesterol, lipid transport; HET: PLM; 1.70A {Aedes aegypti} PDB: 3bdq_A*

Probab=99.62  E-value=2.3e-16  Score=127.82  Aligned_cols=67  Identities=27%  Similarity=0.413  Sum_probs=60.1

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHH
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLM  399 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~  399 (406)
                      ...|++++++|.+.  .+.. ++|||||+++.++|.+|+.|++||++|||+|||||+||+++++||.++|
T Consensus        45 ~~~~~l~l~~g~l~--~~~~-~~ad~tl~~~~~~~~~l~~g~~~~~~a~~~gklki~Gd~~~~~~l~~l~  111 (111)
T 2qzt_A           45 VEQWIVDLKQLKVD--QGVF-ASPDVTVTVGLEDMLAISGKTLTVGDALKQGKIELSGDADLAAKLAEVI  111 (111)
T ss_dssp             EEEEEEETTTTEEE--ESCC-SSCSEEEEEEHHHHHHHHTTSSCHHHHHHTTCEEEEEBHHHHHHHHHHC
T ss_pred             ceEEEEEeeCCEEE--eCCC-CCCCEEEEEEHHHHHHHHcCCCCHHHHHHcCCEEEEcCHHHHHhHHhhC
Confidence            35899999998763  4433 5889999999999999999999999999999999999999999999875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.62  E-value=2.2e-15  Score=152.74  Aligned_cols=165  Identities=15%  Similarity=0.141  Sum_probs=122.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHc---CCeEEEEecCCCCCCCCcccHHHHHHHH----------------HHcCCe
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKD---GANIVIAAKTAEPHPKLPGTIYSAAKEV----------------EDAGGN   66 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~---Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~----------------~~~g~~   66 (406)
                      ..++|+++||||+|+||++++++|+++   |++|++++|+.....        ....+                .....+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~  141 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED--------ARRRLEKTFDSGDPELLRHFKELAADR  141 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH--------HHHHHHGGGCSSCHHHHHHHHHHHTTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH--------HHHHHHHHHHhcchhhhhhhhhhccCc
Confidence            467899999999999999999999999   999999999876311        11111                112467


Q ss_pred             eeeeeecCC------ChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHH
Q psy6113          67 CLPCIVDIR------DEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQ  140 (406)
Q Consensus        67 ~~~~~~Dl~------~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (406)
                      +.++.+|++      +.++++++++       ++|++|||||....                                  
T Consensus       142 v~~v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------------------------------  180 (478)
T 4dqv_A          142 LEVVAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------------------------------  180 (478)
T ss_dssp             EEEEECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------------------------------
T ss_pred             eEEEEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC----------------------------------
Confidence            999999999      4455555544       58999999996532                                  


Q ss_pred             HHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc-
Q psy6113         141 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW-  219 (406)
Q Consensus       141 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~-  219 (406)
                                                       +.+...+++|+.++..+++++.    +.+..+||++||...+.... 
T Consensus       181 ---------------------------------~~~~~~~~~Nv~gt~~ll~aa~----~~~~~~~V~iSS~~v~~~~~~  223 (478)
T 4dqv_A          181 ---------------------------------FPYHELFGPNVAGTAELIRIAL----TTKLKPFTYVSTADVGAAIEP  223 (478)
T ss_dssp             ---------------------------------SSCCEEHHHHHHHHHHHHHHHT----SSSCCCEEEEEEGGGGTTSCT
T ss_pred             ---------------------------------cCHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeehhhcCccCC
Confidence                                             2234577899999999999874    34456999999965432110 


Q ss_pred             --cC-----------------CchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhh
Q psy6113         220 --FK-----------------NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA  259 (406)
Q Consensus       220 --~~-----------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~  259 (406)
                        +.                 ....|+.||.+.+.+++.++.+.   |++++.|.||++
T Consensus       224 ~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v  279 (478)
T 4dqv_A          224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMI  279 (478)
T ss_dssp             TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECcee
Confidence              00                 01349999999999999998765   799999999864

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.61  E-value=2e-15  Score=143.26  Aligned_cols=195  Identities=10%  Similarity=0.015  Sum_probs=128.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|+++||||+|+||++++++|+++| ++|++++|+.++.         ....+...  .+.++.+|++|++++.++++  
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~---------~~~~l~~~--~~~~~~~D~~d~~~l~~~~~--   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK---------AAKELRLQ--GAEVVQGDQDDQVIMELALN--   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH---------HHHHHHHT--TCEEEECCTTCHHHHHHHHT--
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH---------HHHHHHHC--CCEEEEecCCCHHHHHHHHh--
Confidence            5889999999999999999999999 9999999987641         11223332  46778999999998877654  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ++|++|||+|....                                                             
T Consensus        72 -----~~d~vi~~a~~~~~-------------------------------------------------------------   85 (299)
T 2wm3_A           72 -----GAYATFIVTNYWES-------------------------------------------------------------   85 (299)
T ss_dssp             -----TCSEEEECCCHHHH-------------------------------------------------------------
T ss_pred             -----cCCEEEEeCCCCcc-------------------------------------------------------------
Confidence                 58999999984311                                                             


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                        .        ..+.|+.    .++.+++.+++.+.++||++|+..............|..+|++++.+.+.       .
T Consensus        86 --~--------~~~~~~~----~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~  144 (299)
T 2wm3_A           86 --C--------SQEQEVK----QGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD-------I  144 (299)
T ss_dssp             --T--------CHHHHHH----HHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH-------H
T ss_pred             --c--------cchHHHH----HHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH-------C
Confidence              0        0122333    34455555677677899996664322100001246799999999988764       3


Q ss_pred             CeEEEEecchhhhhHHHHHHhcC----CC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTG----GS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~----~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      |++++.|.||++... ....+..    ..         ......+..++|+|++++.++.++.. ..|+.+
T Consensus       145 gi~~~ilrp~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~g~~~  213 (299)
T 2wm3_A          145 GVPMTSVRLPCYFEN-LLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK-YVGQNI  213 (299)
T ss_dssp             TCCEEEEECCEEGGG-GGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH-HTTCEE
T ss_pred             CCCEEEEeecHHhhh-chhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh-hCCeEE
Confidence            799999999964433 2221111    00         00112345899999999999875321 245544

>3cnu_A Predicted coding region AF_1534; structural GE MCSG, PSI-2, protein structure initiative, midwest center F structural genomics; 1.90A {Archaeoglobus fulgidus dsm 4304} PDB: 3bn8_A*

Probab=99.61  E-value=6.6e-16  Score=126.09  Aligned_cols=71  Identities=24%  Similarity=0.456  Sum_probs=65.2

Q ss_pred             cceEEec-cCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhh
Q psy6113         331 GSWHIDL-KTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGAL  402 (406)
Q Consensus       331 g~w~~dl-k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~  402 (406)
                      +.|++++ ++|.+.+..+. ..+|||||+++.++|.+|+.|++||++|||+|||||+||+++++||.++|+..
T Consensus        39 ~~~~l~l~~~G~~~~~~~~-~~~ad~tl~~~~~~~~~l~~g~~~~~~a~~~gklki~Gd~~~~~~l~~ll~~~  110 (116)
T 3cnu_A           39 EEFYVEYKSDGTCEFKEGV-HSSPTFTVVAPPDFWLAVLKGQEDPVSGFMMGKYRIEGNIMEAQRLAGVIKKF  110 (116)
T ss_dssp             EEEEEEECTTSCEEEEESC-CSSCSEEEECCHHHHHHHHTTSSCHHHHHHHTSSEEECCHHHHHHHHHHHHHC
T ss_pred             CEEEEEEccCCeEEEcCCC-CCCCCEEEEEeHHHHHHHHcCCCCHHHHHHcCCEEEEcCHHHHHHHHHHHHhc
Confidence            6899999 89988767654 45889999999999999999999999999999999999999999999999864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.61  E-value=5.5e-15  Score=138.93  Aligned_cols=185  Identities=19%  Similarity=0.142  Sum_probs=126.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++||||+|+||++++++|+++  |++|++++|+.++..           .+..  ..+.++.+|++|++++.++++   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~--~~~~~~~~D~~d~~~~~~~~~---   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-----------ALAA--QGITVRQADYGDEAALTSALQ---   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-----------HHHH--TTCEEEECCTTCHHHHHHHTT---
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-----------hhhc--CCCeEEEcCCCCHHHHHHHHh---
Confidence            3799999999999999999999  999999999876421           1222  246788999999988776654   


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++||+||..     .                                                          
T Consensus        65 ----~~d~vi~~a~~~-----~----------------------------------------------------------   77 (286)
T 2zcu_A           65 ----GVEKLLLISSSE-----V----------------------------------------------------------   77 (286)
T ss_dssp             ----TCSEEEECC-------------------------------------------------------------------
T ss_pred             ----CCCEEEEeCCCC-----c----------------------------------------------------------
Confidence                579999999841     0                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +           .|+.++..+++++    ++.+.++||++||.....     ....|+.+|.+.+.+.+.       .|
T Consensus        78 -~-----------~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~-----~~~~y~~sK~~~e~~~~~-------~~  129 (286)
T 2zcu_A           78 -G-----------QRAPQHRNVINAA----KAAGVKFIAYTSLLHADT-----SPLGLADEHIETEKMLAD-------SG  129 (286)
T ss_dssp             ----------------CHHHHHHHHH----HHHTCCEEEEEEETTTTT-----CCSTTHHHHHHHHHHHHH-------HC
T ss_pred             -h-----------HHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC-----CcchhHHHHHHHHHHHHH-------cC
Confidence             1           1444555555544    555667999999987652     224799999999988763       48


Q ss_pred             eEEEEecchhhhhHHHHH----HhcCC-----CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         249 IAVNALWPRTAIYTAAIE----MLTGG-----SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~----~~~~~-----~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      ++++.+.||++ .+....    .....     .......+..++|+|+++++++.++.  .+|+.+ +.++
T Consensus       130 ~~~~ilrp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~  197 (286)
T 2zcu_A          130 IVYTLLRNGWY-SENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKVYELAGD  197 (286)
T ss_dssp             SEEEEEEECCB-HHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCEEEECCS
T ss_pred             CCeEEEeChHH-hhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCceEEEeCC
Confidence            99999999853 333221    11100     01122345689999999999987532  366665 5543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.60  E-value=1.8e-15  Score=154.60  Aligned_cols=201  Identities=13%  Similarity=0.071  Sum_probs=138.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH---------HHcCCeeeeeeecCCChHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV---------EDAGGNCLPCIVDIRDEHA   79 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~---------~~~g~~~~~~~~Dl~~~~~   79 (406)
                      .++++||||+|.||+.++++|.++|++|++++|+......    .+...+.+         .....++.++.+|++++++
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  225 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIA----WYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  225 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHH----HHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHH----HHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence            5899999999999999999999999999999998763111    11122222         1235689999999999877


Q ss_pred             HHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecc
Q psy6113          80 VQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNN  159 (406)
Q Consensus        80 v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~  159 (406)
                      +.        ...++|+|||||+....                                                     
T Consensus       226 l~--------~~~~~D~Vih~Aa~~~~-----------------------------------------------------  244 (508)
T 4f6l_B          226 VV--------LPENMDTIIHAGARTDH-----------------------------------------------------  244 (508)
T ss_dssp             CC--------CSSCCSEEEECCCC--------------------------------------------------------
T ss_pred             CC--------CccCCCEEEECCceecC-----------------------------------------------------
Confidence            66        45689999999996421                                                     


Q ss_pred             ccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-----------------ccCC
Q psy6113         160 ASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-----------------WFKN  222 (406)
Q Consensus       160 ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-----------------~~~~  222 (406)
                                   ...+...+++|+.++..+++++.+     +..++|++||... ...                 ....
T Consensus       245 -------------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          245 -------------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCC
T ss_pred             -------------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh-ccCCccCCcCcccccccccccccC
Confidence                         123456778899999999998854     3479999999876 110                 0114


Q ss_pred             chhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhH----------------HHHHHhcCCCc------ccccccC
Q psy6113         223 HVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT----------------AAIEMLTGGSA------DAKATSR  280 (406)
Q Consensus       223 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t----------------~~~~~~~~~~~------~~~~~~~  280 (406)
                      ...|+.||.+.+.+++.++.    .|++++.+.||.+...                .+.........      .....+.
T Consensus       306 ~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v  381 (508)
T 4f6l_B          306 TSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFS  381 (508)
T ss_dssp             CSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECE
T ss_pred             CCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEE
Confidence            57899999999999887653    5899999999743221                11111111111      1112345


Q ss_pred             ChhhHHHHHHHhhcCCC
Q psy6113         281 KPEIMADAAYYILSSNP  297 (406)
Q Consensus       281 ~pe~vA~~v~~L~s~~~  297 (406)
                      ..+|+|+++++++....
T Consensus       382 ~v~DvA~ai~~~~~~~~  398 (508)
T 4f6l_B          382 FVDTTARQIVALAQVNT  398 (508)
T ss_dssp             EHHHHHHHHHHHTTBCC
T ss_pred             cHHHHHHHHHHHHhCCC
Confidence            68999999999987543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.56  E-value=1.7e-14  Score=140.43  Aligned_cols=193  Identities=13%  Similarity=0.092  Sum_probs=128.9

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeec-CCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD-IRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~D-l~~~~~v~~~~~   85 (406)
                      +.+++++||||+|+||++++++|+++|++|++++|+.++.         ..+.+.. ...+.++.+| ++|++++.++++
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---------~~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL---------IAEELQA-IPNVTLFQGPLLNNVPLMDTLFE   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH---------HHHHHHT-STTEEEEESCCTTCHHHHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh---------hHHHHhh-cCCcEEEECCccCCHHHHHHHHh
Confidence            4578899999999999999999999999999999987641         1122322 2357788999 999998877654


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                             .+|++|||++...                                                            
T Consensus        73 -------~~d~Vi~~a~~~~------------------------------------------------------------   85 (352)
T 1xgk_A           73 -------GAHLAFINTTSQA------------------------------------------------------------   85 (352)
T ss_dssp             -------TCSEEEECCCSTT------------------------------------------------------------
T ss_pred             -------cCCEEEEcCCCCC------------------------------------------------------------
Confidence                   5799999887320                                                            


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCC-CCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPL-NLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~-~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           .         +.|..+     +.+++.+++.+ -++||++||.. ...+.  .....|+.||++.+.+++.+   
T Consensus        86 -----~---------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~--~~~~~y~~sK~~~E~~~~~~---  141 (352)
T 1xgk_A           86 -----G---------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGP--WPAVPMWAPKFTVENYVRQL---  141 (352)
T ss_dssp             -----S---------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSS--CCCCTTTHHHHHHHHHHHTS---
T ss_pred             -----c---------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCC--CCCccHHHHHHHHHHHHHHc---
Confidence                 0         113333     44455556666 67999999986 23321  34468999999999988762   


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHh------c-CCCcc----------cccccCCh-hhHHHHHHHhhcCCCCCccceEE
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEML------T-GGSAD----------AKATSRKP-EIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~------~-~~~~~----------~~~~~~~p-e~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                          |++++.|.||+ ..+......      . .....          ....+..+ +|+|++++.++.+......|+.+
T Consensus       142 ----gi~~~ivrpg~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~  216 (352)
T 1xgk_A          142 ----GLPSTFVYAGI-YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRI  216 (352)
T ss_dssp             ----SSCEEEEEECE-EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEE
T ss_pred             ----CCCEEEEecce-ecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEE
Confidence                79999999985 333211100      0 00000          01123467 89999999998753223345544

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.52  E-value=5.3e-14  Score=132.61  Aligned_cols=184  Identities=17%  Similarity=0.132  Sum_probs=121.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++||||+|+||++++++|+++ |++|++++|+.++...+             ....+.++.+|++|++++.++++    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------~~~~v~~~~~D~~d~~~l~~~~~----   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------WRGKVSVRQLDYFNQESMVEAFK----   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------GBTTBEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------hhCCCEEEEcCCCCHHHHHHHHh----
Confidence            4899999999999999999998 99999999998764421             12357889999999988777654    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|++|||||....                                                               
T Consensus        65 ---~~d~vi~~a~~~~~---------------------------------------------------------------   78 (289)
T 3e48_A           65 ---GMDTVVFIPSIIHP---------------------------------------------------------------   78 (289)
T ss_dssp             ---TCSEEEECCCCCCS---------------------------------------------------------------
T ss_pred             ---CCCEEEEeCCCCcc---------------------------------------------------------------
Confidence               68999999985321                                                               


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                        .        ..|+.+.    +.+++.+++.+-++||++||.......      .|..++..     ..+...+...|+
T Consensus        79 --~--------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~~~~~------~~~~~~~~-----~~~e~~~~~~g~  133 (289)
T 3e48_A           79 --S--------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYADQHNN------PFHMSPYF-----GYASRLLSTSGI  133 (289)
T ss_dssp             --H--------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCCSTTC------CSTTHHHH-----HHHHHHHHHHCC
T ss_pred             --c--------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCCCCCC------CCccchhH-----HHHHHHHHHcCC
Confidence              0        1144444    444555577767899999996543321      23333321     122333445689


Q ss_pred             EEEEecchhhhhHHHHHHhc----C-----CCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         250 AVNALWPRTAIYTAAIEMLT----G-----GSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~----~-----~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      +++.|.||++... +...+.    .     ........+..++|+|+++++++.+...+  |+.+
T Consensus       134 ~~~ilrp~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~  195 (289)
T 3e48_A          134 DYTYVRMAMYMDP-LKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRY  195 (289)
T ss_dssp             EEEEEEECEESTT-HHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEE
T ss_pred             CEEEEeccccccc-cHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceE
Confidence            9999999964332 221111    0     00111223568999999999999764432  5544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.45  E-value=6.4e-13  Score=126.07  Aligned_cols=84  Identities=19%  Similarity=0.251  Sum_probs=61.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCc-ccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLP-GTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~-~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +++++||||+|+||++++++|+++|++|++++|+...... . +... ...++..  ..+.++.+|++|++++.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~~~~~-~~~~l~~--~~v~~v~~D~~d~~~l~~~~~--   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAAN-PETKEE-LIDNYQS--LGVILLEGDINDHETLVKAIK--   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSC-HHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCC-hHHHHH-HHHHHHh--CCCEEEEeCCCCHHHHHHHHh--
Confidence            4679999999999999999999999999999998621110 0 0111 1122222  246788999999988877665  


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                           ++|++|||||.
T Consensus        76 -----~~d~vi~~a~~   86 (307)
T 2gas_A           76 -----QVDIVICAAGR   86 (307)
T ss_dssp             -----TCSEEEECSSS
T ss_pred             -----CCCEEEECCcc
Confidence                 58999999984

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.44  E-value=3.8e-13  Score=131.40  Aligned_cols=168  Identities=17%  Similarity=0.078  Sum_probs=120.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++||||+|.||++++++|+++|+ +|+..+|+                                +|+++++++++    
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------~d~~~l~~~~~----   45 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------TKEEELESALL----   45 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------CCHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------CCHHHHHHHhc----
Confidence            589999999999999999999998 88876663                                46667666665    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ++|++||+||.....                                                              
T Consensus        46 ---~~d~Vih~a~~~~~~--------------------------------------------------------------   60 (369)
T 3st7_A           46 ---KADFIVHLAGVNRPE--------------------------------------------------------------   60 (369)
T ss_dssp             ---HCSEEEECCCSBCTT--------------------------------------------------------------
T ss_pred             ---cCCEEEECCcCCCCC--------------------------------------------------------------
Confidence               389999999965321                                                              


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCC-eEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g-~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                           ++...+++|+.++..+++++    ++.+.. ++|++||.....      ...|+.+|.+.+.+.+.++.+.   |
T Consensus        61 -----~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~------~~~Y~~sK~~~E~~~~~~~~~~---g  122 (369)
T 3st7_A           61 -----HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ------DNPYGESKLQGEQLLREYAEEY---G  122 (369)
T ss_dssp             -----CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS------CSHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             -----CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC------CCCchHHHHHHHHHHHHHHHHh---C
Confidence                 22345678999999998887    444433 899999976543      4689999999999999998875   6


Q ss_pred             eEEEEecchhhhhH-----------HHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCC
Q psy6113         249 IAVNALWPRTAIYT-----------AAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNP  297 (406)
Q Consensus       249 I~vn~v~PG~~~~t-----------~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~  297 (406)
                      +++..+.|+.+...           .+........      ......+..++|+|++++.++....
T Consensus       123 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          123 NTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             CCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             CCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            78888887643221           1112221111      1111234578999999999987543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.43  E-value=2.6e-12  Score=122.19  Aligned_cols=188  Identities=10%  Similarity=0.027  Sum_probs=120.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .++++||||+|+||++++++|+++|++|++++|+......  +.. +....+.  ...+.++.+|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~-~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNI--DKV-QMLLYFK--QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCH--HHH-HHHHHHH--TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccch--hHH-HHHHHHH--hCCeEEEeCCCCCHHHHHHHHh---
Confidence            4679999999999999999999999999999998653210  001 1111222  3457788999999998877654   


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++||++|....                                                              
T Consensus        76 ----~~d~vi~~a~~~~~--------------------------------------------------------------   89 (313)
T 1qyd_A           76 ----QVDVVISALAGGVL--------------------------------------------------------------   89 (313)
T ss_dssp             ----TCSEEEECCCCSSS--------------------------------------------------------------
T ss_pred             ----CCCEEEECCccccc--------------------------------------------------------------
Confidence                58999999995421                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCC----ccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPF----WFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~----~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                       .           .|+.+...+++++    ++.+ -++||+ |+.......    ..+....| .+|.+++.+.+     
T Consensus        90 -~-----------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~-----  146 (313)
T 1qyd_A           90 -S-----------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIE-----  146 (313)
T ss_dssp             -S-----------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHH-----
T ss_pred             -h-----------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHH-----
Confidence             0           1444555555544    5555 568875 433211110    01335678 99999887765     


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------Cc---------ccccccCChhhHHHHHHHhhcCC
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SA---------DAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~---------~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                        ..|++++.+.||++ .+.....+...      ..         .....+..++|+|++++.++.++
T Consensus       147 --~~g~~~~ilrp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~  211 (313)
T 1qyd_A          147 --AASIPYTYVSSNMF-AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  211 (313)
T ss_dssp             --HTTCCBCEEECCEE-HHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             --hcCCCeEEEEecee-ccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCc
Confidence              24788999999864 33322211110      00         01123457899999999998753

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.42  E-value=9.6e-13  Score=127.42  Aligned_cols=190  Identities=13%  Similarity=0.037  Sum_probs=123.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .|+.++++||||+|+||++++++|+++|++|++++|+.....+   .. .....+.  ...+.++.+|++|.+++.++++
T Consensus         7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~-~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~   80 (346)
T 3i6i_A            7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPS---KA-KIFKALE--DKGAIIVYGLINEQEAMEKILK   80 (346)
T ss_dssp             ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHH---HH-HHHHHHH--HTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChh---HH-HHHHHHH--hCCcEEEEeecCCHHHHHHHHh
Confidence            4567899999999999999999999999999999998743110   11 1112222  2457889999999999888876


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      +.     ++|++||+||..                                                             
T Consensus        81 ~~-----~~d~Vi~~a~~~-------------------------------------------------------------   94 (346)
T 3i6i_A           81 EH-----EIDIVVSTVGGE-------------------------------------------------------------   94 (346)
T ss_dssp             HT-----TCCEEEECCCGG-------------------------------------------------------------
T ss_pred             hC-----CCCEEEECCchh-------------------------------------------------------------
Confidence            52     689999999831                                                             


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCC--CccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNP--FWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~--~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                                       |+.+...+++++    ++.+ -.++|+ |+......  .+.+....|+.+|.+++.+.+.   
T Consensus        95 -----------------n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~---  149 (346)
T 3i6i_A           95 -----------------SILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEE---  149 (346)
T ss_dssp             -----------------GGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH---
T ss_pred             -----------------hHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHH---
Confidence                             555666666665    4444 457775 44322111  1123457899999998877664   


Q ss_pred             hhcCCCeEEEEecchhhhhHH---HHHHh--c-CCC-------cccccccCChhhHHHHHHHhhcCC
Q psy6113         243 EFKGDNIAVNALWPRTAIYTA---AIEML--T-GGS-------ADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~---~~~~~--~-~~~-------~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                          .|+++..|.||++....   +....  . ...       ......+..++|+|++++.++.+.
T Consensus       150 ----~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          150 ----SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             ----TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred             ----cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence                47899999998533210   00000  0 000       011223567999999999998753

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.41  E-value=1.9e-12  Score=123.82  Aligned_cols=83  Identities=14%  Similarity=0.145  Sum_probs=61.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC-CCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA-EPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~-~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .++++||||+|+||++++++|+++|++|++++|+. .....  +.. +....+..  ..+.++.+|++|++++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~-~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~--   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTP--SSV-QLREEFRS--MGVTIIEGEMEEHEKMVSVLK--   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCH--HHH-HHHHHHHH--TTCEEEECCTTCHHHHHHHHT--
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccCh--HHH-HHHHHhhc--CCcEEEEecCCCHHHHHHHHc--
Confidence            36799999999999999999999999999999986 22110  001 11122222  347788999999998877665  


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                           ++|++|||||.
T Consensus        77 -----~~d~vi~~a~~   87 (321)
T 3c1o_A           77 -----QVDIVISALPF   87 (321)
T ss_dssp             -----TCSEEEECCCG
T ss_pred             -----CCCEEEECCCc
Confidence                 58999999984

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.40  E-value=3.2e-12  Score=130.71  Aligned_cols=198  Identities=12%  Similarity=0.066  Sum_probs=130.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++++||||+|.||++++++|+++|++|++++|+..+..                     .+.+|+.+..         .
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------------~v~~d~~~~~---------~  196 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------------KRFWDPLNPA---------S  196 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------------CEECCTTSCC---------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------------ceeecccchh---------H
Confidence            678999999999999999999999999999999876521                     2456775431         2


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.+.++|+|||+||.....                                                             
T Consensus       197 ~~l~~~D~Vih~A~~~~~~-------------------------------------------------------------  215 (516)
T 3oh8_A          197 DLLDGADVLVHLAGEPIFG-------------------------------------------------------------  215 (516)
T ss_dssp             TTTTTCSEEEECCCC-----------------------------------------------------------------
T ss_pred             HhcCCCCEEEECCCCcccc-------------------------------------------------------------
Confidence            3346789999999964321                                                             


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~  239 (406)
                       ..+.+....++++|+.++.++++++.   ++.+.++||++||...+...         ...+...|+.+|...+.+.+ 
T Consensus       216 -~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~-  290 (516)
T 3oh8_A          216 -RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATA-  290 (516)
T ss_dssp             --CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH-
T ss_pred             -ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH-
Confidence             23455677889999999999999743   34455799999997654310         01134568888877665433 


Q ss_pred             HHHhhcCCCeEEEEecchhhhhH------HHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEEEe
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYT------AAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID  307 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t------~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d  307 (406)
                         ++...|++++.+.||.+...      .+........      ......+...+|+|+++++++....  ..|.+.+.
T Consensus       291 ---~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~g~~ni~  365 (516)
T 3oh8_A          291 ---PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ--ISGPINAV  365 (516)
T ss_dssp             ---HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT--CCEEEEES
T ss_pred             ---HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc--cCCcEEEE
Confidence               33456899999999854331      1111111110      0111234578999999999987532  45655433

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.38  E-value=8.4e-12  Score=119.18  Aligned_cols=78  Identities=12%  Similarity=0.212  Sum_probs=61.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+++||||+|+||++++++|+++|++|++++|+....      . +...++...  .+.++.+|++|++++.++++    
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~------~-~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~~----   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK------T-TLLDEFQSL--GAIIVKGELDEHEKLVELMK----   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC------H-HHHHHHHHT--TCEEEECCTTCHHHHHHHHT----
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch------h-hHHHHhhcC--CCEEEEecCCCHHHHHHHHc----
Confidence            5799999999999999999999999999999987521      0 112223332  46788999999998877664    


Q ss_pred             hcCCccEEEecccc
Q psy6113          90 KFGGIDILVNNASA  103 (406)
Q Consensus        90 ~~g~iD~linnAG~  103 (406)
                         ++|++||+|+.
T Consensus        79 ---~~d~vi~~a~~   89 (318)
T 2r6j_A           79 ---KVDVVISALAF   89 (318)
T ss_dssp             ---TCSEEEECCCG
T ss_pred             ---CCCEEEECCch
Confidence               58999999984

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.38  E-value=1.9e-12  Score=121.64  Aligned_cols=184  Identities=10%  Similarity=0.039  Sum_probs=120.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++++|||| |.||++++++|+++|++|++++|+.++           ...+..  ..+.++.+|++|.+           
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~~~~~--~~~~~~~~D~~d~~-----------   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQ-----------MEAIRA--SGAEPLLWPGEEPS-----------   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGG-----------HHHHHH--TTEEEEESSSSCCC-----------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhh-----------hhhHhh--CCCeEEEecccccc-----------
Confidence            67999998 999999999999999999999998653           122222  35788899999833           


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                       +.++|++||+|+.....                                                              
T Consensus        61 -~~~~d~vi~~a~~~~~~--------------------------------------------------------------   77 (286)
T 3ius_A           61 -LDGVTHLLISTAPDSGG--------------------------------------------------------------   77 (286)
T ss_dssp             -CTTCCEEEECCCCBTTB--------------------------------------------------------------
T ss_pred             -cCCCCEEEECCCccccc--------------------------------------------------------------
Confidence             56799999999954210                                                              


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHh--cCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKK--SNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~  238 (406)
                          +.              .++.++..+++  .+-.++|++||...+...         +..+...|+.+|.+.+.+.+
T Consensus        78 ----~~--------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  139 (286)
T 3ius_A           78 ----DP--------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQ  139 (286)
T ss_dssp             ----CH--------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ----cH--------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence                00              01233344444  445799999997543221         01234579999999998887


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHH--HHHhcCCCc------ccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAA--IEMLTGGSA------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~--~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      .+      .|++++.+.|+++.....  ...+.....      .....+...+|+|+++++++....   .|+.+ +.+
T Consensus       140 ~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~  209 (286)
T 3ius_A          140 AV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD---PGAVYNVCD  209 (286)
T ss_dssp             HS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC---TTCEEEECC
T ss_pred             hh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC---CCCEEEEeC
Confidence            76      589999999985432210  000001100      011223467999999999997643   45444 443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.35  E-value=5.9e-12  Score=119.43  Aligned_cols=84  Identities=14%  Similarity=0.237  Sum_probs=62.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .++++||||+|+||++++++|+++|++|++++|+...... .+.. +....+.  ...+.++.+|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-~~~~-~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~---   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSN-SEKA-QLLESFK--ASGANIVHGSIDDHASLVEAVK---   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTT-HHHH-HHHHHHH--TTTCEEECCCTTCHHHHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccC-HHHH-HHHHHHH--hCCCEEEEeccCCHHHHHHHHc---
Confidence            4679999999999999999999999999999998654210 0000 1111222  3457788999999998877765   


Q ss_pred             HhcCCccEEEecccc
Q psy6113          89 DKFGGIDILVNNASA  103 (406)
Q Consensus        89 ~~~g~iD~linnAG~  103 (406)
                          ++|++||+||.
T Consensus        77 ----~~d~vi~~a~~   87 (308)
T 1qyc_A           77 ----NVDVVISTVGS   87 (308)
T ss_dssp             ----TCSEEEECCCG
T ss_pred             ----CCCEEEECCcc
Confidence                58999999984

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.29  E-value=1.7e-11  Score=119.01  Aligned_cols=156  Identities=15%  Similarity=0.095  Sum_probs=108.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-----CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDG-----ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~G-----a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++++||||+|+||++++++|+++|     ++|++++|+.....              ....++.++.+|++|.+++.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------------~~~~~~~~~~~Dl~d~~~~~~~   66 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------------HEDNPINYVQCDISDPDDSQAK   66 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------------CCSSCCEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------------cccCceEEEEeecCCHHHHHHH
Confidence            5789999999999999999999999     99999999876532              0134577889999999887766


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.    .+++|++||+||...                                                          
T Consensus        67 ~~~----~~~~d~vih~a~~~~----------------------------------------------------------   84 (364)
T 2v6g_A           67 LSP----LTDVTHVFYVTWANR----------------------------------------------------------   84 (364)
T ss_dssp             HTT----CTTCCEEEECCCCCC----------------------------------------------------------
T ss_pred             Hhc----CCCCCEEEECCCCCc----------------------------------------------------------
Confidence            542    235999999999531                                                          


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEE-------EeCCCCCCCCC-----c-------cCCch
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL-------NISPPLNLNPF-----W-------FKNHV  224 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv-------~vsS~~~~~~~-----~-------~~~~~  224 (406)
                                +++...+++|+.++.++++++.+...  +-.++|       ++||...+...     +       .+...
T Consensus        85 ----------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~  152 (364)
T 2v6g_A           85 ----------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMN  152 (364)
T ss_dssp             ----------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCC
T ss_pred             ----------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccccCCCCCCccccCCccch
Confidence                      12466889999999999999865421  234666       78886533210     0       11233


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcCCC-eEEEEecchhh
Q psy6113         225 AYTISKYGMSMCALGMAEEFKGDN-IAVNALWPRTA  259 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~~g-I~vn~v~PG~~  259 (406)
                      .|.    +.+.+.+.++.   .+| +++..+.|+.+
T Consensus       153 ~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v  181 (364)
T 2v6g_A          153 FYY----DLEDIMLEEVE---KKEGLTWSVHRPGNI  181 (364)
T ss_dssp             HHH----HHHHHHHHHHT---TSTTCEEEEEEESSE
T ss_pred             hhH----HHHHHHHHHhh---cCCCceEEEECCCce
Confidence            563    23444444433   245 99999998743

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.18  E-value=3.7e-12  Score=120.34  Aligned_cols=85  Identities=18%  Similarity=0.250  Sum_probs=67.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+++||+++||||++|||+++++.|+++|++|++++|+.++       .++..+++... ..+.++.+|+++++++++++
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~-------~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~  186 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK-------AQAAADSVNKR-FKVNVTAAETADDASRAEAV  186 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHH-------HHHHHHHHHhc-CCcEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999998654       22344444332 23567889999998877665


Q ss_pred             HHHHHhcCCccEEEeccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~  104 (406)
                      +       .+|+||||||+.
T Consensus       187 ~-------~~DvlVn~ag~g  199 (287)
T 1lu9_A          187 K-------GAHFVFTAGAIG  199 (287)
T ss_dssp             T-------TCSEEEECCCTT
T ss_pred             H-------hCCEEEECCCcc
Confidence            4       479999999864

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.09  E-value=7.3e-11  Score=106.65  Aligned_cols=82  Identities=26%  Similarity=0.284  Sum_probs=63.8

Q ss_pred             ccCCcEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeee
Q psy6113           6 KLSGLTIFITGA----------------SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP   69 (406)
Q Consensus         6 ~l~gk~alVTGa----------------s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~   69 (406)
                      +|+||++|||||                |||||+++|++|+++|++|++++|+.. ++.             ..+  +  
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~-------------~~g--~--   66 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT-------------PPF--V--   66 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC-------------CTT--E--
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc-------------CCC--C--
Confidence            689999999999                689999999999999999999988653 110             011  1  


Q ss_pred             eeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCC
Q psy6113          70 CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        70 ~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~  108 (406)
                      ..+|+++.   +++++.+.+.++++|++|||||+....+
T Consensus        67 ~~~dv~~~---~~~~~~v~~~~~~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           67 KRVDVMTA---LEMEAAVNASVQQQNIFIGCAAVADYRA  102 (226)
T ss_dssp             EEEECCSH---HHHHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             eEEccCcH---HHHHHHHHHhcCCCCEEEECCcccCCCC
Confidence            24577774   4567777888999999999999875443

>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}

Probab=98.52  E-value=5.6e-11  Score=124.15  Aligned_cols=72  Identities=19%  Similarity=0.287  Sum_probs=64.9

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGA  401 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~  401 (406)
                      ...|++++++|.+...++...++|||||+++.++|.+|+.|+++|++|||+|||||+||+++++||..+|+.
T Consensus       580 ~e~~~l~L~NGvl~~~~~~~~~~ad~Tltls~~~l~~l~~G~~~~~~a~~~Gklkv~Gd~~~~~kL~~lld~  651 (668)
T 2yhe_A          580 KQDIALTLRNGVLTQRVGSLNPKADVTVKLTKPTLDQIAARKLDLPTAIKQGTVKLDGDGKKLGEFFGLLDS  651 (668)
Confidence            468999999998876655334588999999999999999999999999999999999999999999999874

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.92  E-value=3.6e-08  Score=92.89  Aligned_cols=195  Identities=12%  Similarity=0.023  Sum_probs=113.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .++||||+|-||+.++++|.++|++|+++.|++.+.                   ++.+   |     .      ...+.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------------------~~~~---~-----~------~~~~~   48 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------------------RITW---D-----E------LAASG   48 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------------EEEH---H-----H------HHHHC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------------------eeec---c-----h------hhHhh
Confidence            389999999999999999999999999999976531                   1111   1     0      01233


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                      ...+|.+||.||........                                                           .
T Consensus        49 l~~~d~vihla~~~i~~~~~-----------------------------------------------------------~   69 (298)
T 4b4o_A           49 LPSCDAAVNLAGENILNPLR-----------------------------------------------------------R   69 (298)
T ss_dssp             CCSCSEEEECCCCCSSCTTS-----------------------------------------------------------C
T ss_pred             ccCCCEEEEeccCcccchhh-----------------------------------------------------------h
Confidence            56799999999853222111                                                           3


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~~la  241 (406)
                      .+.......++.|+.++..+.+++...  ..+..++|+.||...+....         ......|+.+|..-+.     +
T Consensus        70 ~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~  142 (298)
T 4b4o_A           70 WNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEA-----A  142 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHH-----H
T ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHH-----H
Confidence            455566778888988888777665221  12234577777765432210         1122334444433322     2


Q ss_pred             HhhcCCCeEEEEecchhhhh------HHHHHHhcCCC------cccccccCChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIY------TAAIEMLTGGS------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~------t~~~~~~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      ......++++..+.||.+..      ..+........      ......+...+|+++++.+++..+  ...|.+.+
T Consensus       143 ~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~--~~~g~yn~  217 (298)
T 4b4o_A          143 ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEAN--HVHGVLNG  217 (298)
T ss_dssp             HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCT--TCCEEEEE
T ss_pred             HHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCC--CCCCeEEE
Confidence            23456788888888863211      11211111111      011122346799999999988643  34565543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.89  E-value=1.5e-09  Score=98.32  Aligned_cols=82  Identities=13%  Similarity=0.267  Sum_probs=62.9

Q ss_pred             CCcEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeee
Q psy6113           8 SGLTIFITGA----------------SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI   71 (406)
Q Consensus         8 ~gk~alVTGa----------------s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~   71 (406)
                      +||+++||||                ||++|+++|++|+++|++|++++|.......              ...     .
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~--------------~~~-----~   62 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE--------------PHP-----N   62 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC--------------CCT-----T
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------------CCC-----C
Confidence            5899999999                7789999999999999999999997642110              001     1


Q ss_pred             ecCCChHHHHHHHHHHHHhcCCccEEEecccccccCC
Q psy6113          72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        72 ~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~  108 (406)
                      +|+.+.++++++++.+.+.++++|++|+|||+....+
T Consensus        63 ~~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p   99 (232)
T 2gk4_A           63 LSIREITNTKDLLIEMQERVQDYQVLIHSMAVSDYTP   99 (232)
T ss_dssp             EEEEECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEE
T ss_pred             eEEEEHhHHHHHHHHHHHhcCCCCEEEEcCccccccc
Confidence            2444445777788888888999999999999865443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.82  E-value=7.5e-09  Score=88.62  Aligned_cols=82  Identities=18%  Similarity=0.136  Sum_probs=68.2

Q ss_pred             chHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh--HHHHHHHHHHHHhcCCccE
Q psy6113          19 RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE--HAVQSAVNAAVDKFGGIDI   96 (406)
Q Consensus        19 ~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~--~~v~~~~~~i~~~~g~iD~   96 (406)
                      +-++.++++.|+++|++|++..|+.+.....    .+..+.+.+.|.++..+++|++++  ++++++++.+.+.+|+ |+
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~----~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dV  100 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAH----PDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DV  100 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSC----TTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCccccccc----ccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CE
Confidence            3488999999999999999998876553321    123455667788999999999999  9999999999999999 99


Q ss_pred             EEecccccc
Q psy6113          97 LVNNASAIS  105 (406)
Q Consensus        97 linnAG~~~  105 (406)
                      ||||||+..
T Consensus       101 LVnnAgg~r  109 (157)
T 3gxh_A          101 LVHCLANYR  109 (157)
T ss_dssp             EEECSBSHH
T ss_pred             EEECCCCCC
Confidence            999999753

>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*

Probab=98.74  E-value=4.7e-09  Score=109.94  Aligned_cols=72  Identities=22%  Similarity=0.298  Sum_probs=65.2

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGA  401 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~  401 (406)
                      ...|++.+++|.+...++...++||+||+++.++|.+|+.|+++|++|||+|||||+||+++++||..+|+.
T Consensus       571 ~e~y~l~l~ngvl~~~~~~~~~~ad~Tlt~~~~~l~~l~~g~~~~~~a~~~g~lkv~Gd~~~~~~l~~~ld~  642 (658)
T 2cfu_A          571 GENYLLELKNSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKLKSSGNPLLLGQLFGMLGD  642 (658)
T ss_dssp             TEEEEEEEETTEEEEEETCCCTTCSEEEEECHHHHHHHHTTSSCHHHHHHTTSEEEEECTTHHHHHHTTBCC
T ss_pred             CcEEEEEEECcEEEeccCCCCCCCCEEEEECHHHHHHHHcCCCCHHHHhhcCceEEeCCHHHHHHHHHhhcC
Confidence            478999999999887765434588999999999999999999999999999999999999999999988764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.72  E-value=4.2e-11  Score=119.46  Aligned_cols=39  Identities=18%  Similarity=0.335  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .+|.||+++|||++ |||+++|+.|++.|++|+++++++.
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~  299 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPI  299 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            35899999999997 9999999999999999999988754

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.51  E-value=1.3e-07  Score=90.72  Aligned_cols=153  Identities=13%  Similarity=0.115  Sum_probs=97.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ..++||||+|.||..++..|+++|+       .|++.++....     +.......++....  +.++ .|+++.++..+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~-----~~~~g~~~dl~~~~--~~~~-~di~~~~~~~~   76 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAM-----KALEGVVMELEDCA--FPLL-AGLEATDDPKV   76 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGH-----HHHHHHHHHHHTTT--CTTE-EEEEEESCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCch-----hhccchhhhhhccc--cccc-CCeEeccChHH
Confidence            3699999999999999999999996       79999876410     00111122332211  1222 46665444333


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      .       +...|++||.||.....                                                       
T Consensus        77 a-------~~~~D~Vih~Ag~~~~~-------------------------------------------------------   94 (327)
T 1y7t_A           77 A-------FKDADYALLVGAAPRKA-------------------------------------------------------   94 (327)
T ss_dssp             H-------TTTCSEEEECCCCCCCT-------------------------------------------------------
T ss_pred             H-------hCCCCEEEECCCcCCCC-------------------------------------------------------
Confidence            2       34689999999964321                                                       


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCC-------CCCccCCchhhhHhhHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL-------NPFWFKNHVAYTISKYGMSM  235 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~-------~~~~~~~~~~Y~asKaal~~  235 (406)
                             .   +.....+++|+.+...+.+++..+-  ....+++++|+....       ....+++...|+.+|..-+.
T Consensus        95 -------~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er  162 (327)
T 1y7t_A           95 -------G---MERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNR  162 (327)
T ss_dssp             -------T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHH
T ss_pred             -------C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHH
Confidence                   1   1234578899999999988874431  123588888876410       11012344569999999888


Q ss_pred             HHHHHHHhh
Q psy6113         236 CALGMAEEF  244 (406)
Q Consensus       236 l~~~la~e~  244 (406)
                      +.+.++..+
T Consensus       163 ~~~~~a~~~  171 (327)
T 1y7t_A          163 AKAQLAKKT  171 (327)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            888888765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.47  E-value=2.9e-07  Score=73.77  Aligned_cols=75  Identities=23%  Similarity=0.306  Sum_probs=59.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .+++++|+|+ |++|+++++.|.++| ++|++++|+.++           .+.+.  ...+.++.+|+++.+++.+++  
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~-----------~~~~~--~~~~~~~~~d~~~~~~~~~~~--   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAA-----------LAVLN--RMGVATKQVDAKDEAGLAKAL--   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHH-----------HHHHH--TTTCEEEECCTTCHHHHHHHT--
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHH-----------HHHHH--hCCCcEEEecCCCHHHHHHHH--
Confidence            4678999999 999999999999999 899999997653           22222  234566789999988776654  


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                           .++|++|++++.
T Consensus        68 -----~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 -----GGFDAVISAAPF   79 (118)
T ss_dssp             -----TTCSEEEECSCG
T ss_pred             -----cCCCEEEECCCc
Confidence                 378999999964

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.42  E-value=2.8e-07  Score=81.52  Aligned_cols=79  Identities=22%  Similarity=0.265  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++||||++|||+++++.+...|++|++++|+.++           .+...+.+..   ..+|.++.+..+.+.+..
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~-----------~~~~~~~g~~---~~~d~~~~~~~~~~~~~~  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-----------REMLSRLGVE---YVGDSRSVDFADEILELT  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-----------HHHHHTTCCS---EEEETTCSTHHHHHHHHT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCC---EEeeCCcHHHHHHHHHHh
Confidence            58999999999999999999999999999999987543           2233334432   235777765544443322


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      .  .+++|++|+|+|
T Consensus       104 ~--~~~~D~vi~~~g  116 (198)
T 1pqw_A          104 D--GYGVDVVLNSLA  116 (198)
T ss_dssp             T--TCCEEEEEECCC
T ss_pred             C--CCCCeEEEECCc
Confidence            1  136999999998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.39  E-value=1e-07  Score=89.82  Aligned_cols=81  Identities=30%  Similarity=0.389  Sum_probs=57.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++|+++|||++ |+|+++++.|+++| +|++++|+.++.       ++..+++...+.....+.+|+++.        
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~-------~~l~~~~~~~~~~~~~~~~d~~~~--------  187 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKA-------EALAKEIAEKLNKKFGEEVKFSGL--------  187 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHH-------HHHHHHHHHHHTCCHHHHEEEECT--------
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHH-------HHHHHHHhhhcccccceeEEEeeH--------
Confidence            5789999999997 99999999999999 999999986542       233344432211011234555552        


Q ss_pred             HHHHhcCCccEEEecccccc
Q psy6113          86 AAVDKFGGIDILVNNASAIS  105 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~  105 (406)
                        .+.++++|+||||+|...
T Consensus       188 --~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 --DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             --TCCCTTCCEEEECSCTTC
T ss_pred             --HHhhCCCCEEEECCCCCC
Confidence              345689999999999764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.34  E-value=5.3e-07  Score=86.50  Aligned_cols=80  Identities=20%  Similarity=0.338  Sum_probs=60.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++||||++|||+++++.+...|++|++++|+.++           .+.+++.+..   ..+|.++.+++.+.+.++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~-----------~~~~~~~g~~---~~~d~~~~~~~~~~~~~~  210 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK-----------IAYLKQIGFD---AAFNYKTVNSLEEALKKA  210 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCS---EEEETTSCSCHHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHhcCCc---EEEecCCHHHHHHHHHHH
Confidence            58999999999999999999999999999999987543           2223344442   335887745555555554


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      ..  +++|++|+|+|.
T Consensus       211 ~~--~~~d~vi~~~g~  224 (333)
T 1v3u_A          211 SP--DGYDCYFDNVGG  224 (333)
T ss_dssp             CT--TCEEEEEESSCH
T ss_pred             hC--CCCeEEEECCCh
Confidence            33  689999999994

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.32  E-value=1.4e-06  Score=86.05  Aligned_cols=82  Identities=22%  Similarity=0.271  Sum_probs=65.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC---CeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDG---ANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~G---a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +.++|+|| ||||+++++.|+++|   .+|++++|+.+++       ++..+++... +.++..+.+|+++.++++++++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~-------~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~   73 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKC-------QEIAQSIKAKGYGEIDITTVDADSIEELVALIN   73 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHH-------HHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHH-------HHHHHHhhhhcCCceEEEEecCCCHHHHHHHHH
Confidence            46888999 799999999999999   3899999987652       3344444432 2467888999999999999988


Q ss_pred             HHHHhcCCccEEEeccccc
Q psy6113          86 AAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~  104 (406)
                      +.     ++|+||||+|..
T Consensus        74 ~~-----~~DvVin~ag~~   87 (405)
T 4ina_A           74 EV-----KPQIVLNIALPY   87 (405)
T ss_dssp             HH-----CCSEEEECSCGG
T ss_pred             hh-----CCCEEEECCCcc
Confidence            76     689999999853

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.32  E-value=1.7e-07  Score=95.57  Aligned_cols=39  Identities=44%  Similarity=0.635  Sum_probs=30.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ++++|+++||||+ |+|++++++|+++|++|++++|+.++
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~  399 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYER  399 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHH
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            5789999999995 99999999999999999999998654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.23  E-value=1.2e-06  Score=87.51  Aligned_cols=78  Identities=17%  Similarity=0.282  Sum_probs=59.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++|+++||| +||+|+++++.|+++|++|++++|+.++.           +.+.+.-..+..+.+|+++.+++.++++  
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a-----------~~la~~~~~~~~~~~Dv~d~~~l~~~l~--   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA-----------KKLSAGVQHSTPISLDVNDDAALDAEVA--   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH-----------HHTTTTCTTEEEEECCTTCHHHHHHHHT--
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH-----------HHHHHhcCCceEEEeecCCHHHHHHHHc--
Confidence            478899998 79999999999999999999999986431           2222111236678899999988776653  


Q ss_pred             HHhcCCccEEEeccccc
Q psy6113          88 VDKFGGIDILVNNASAI  104 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~  104 (406)
                           ++|++|||++..
T Consensus        68 -----~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -----KHDLVISLIPYT   79 (450)
T ss_dssp             -----TSSEEEECCC--
T ss_pred             -----CCcEEEECCccc
Confidence                 699999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.23  E-value=2.5e-06  Score=82.24  Aligned_cols=80  Identities=23%  Similarity=0.309  Sum_probs=61.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+++|||+++++.+...|++|++++|+.++           .+.+++.+..   ..+|.++.+++.+.+.++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~-----------~~~~~~~g~~---~~~d~~~~~~~~~~~~~~  234 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK-----------EELFRSIGGE---VFIDFTKEKDIVGAVLKA  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTH-----------HHHHHHTTCC---EEEETTTCSCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHH-----------HHHHHHcCCc---eEEecCccHhHHHHHHHH
Confidence            58999999999999999999999999999999998764           1233344543   234887666666666665


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      ...  ++|++|+|+|.
T Consensus       235 ~~~--~~D~vi~~~g~  248 (347)
T 2hcy_A          235 TDG--GAHGVINVSVS  248 (347)
T ss_dssp             HTS--CEEEEEECSSC
T ss_pred             hCC--CCCEEEECCCc
Confidence            443  79999999994

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.19  E-value=3e-06  Score=82.54  Aligned_cols=78  Identities=21%  Similarity=0.278  Sum_probs=58.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+++++++|+|+ |+||+++++.+...|++|++.+|+.++           .+.+.+ .+..   +.+|.++.+++.+.
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~-----------~~~~~~~~g~~---~~~~~~~~~~l~~~  226 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKR-----------LQYLDDVFGGR---VITLTATEANIKKS  226 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHTTTS---EEEEECCHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH-----------HHHHHHhcCce---EEEecCCHHHHHHH
Confidence            3588999999999 999999999999999999999998653           122222 3333   45677887776665


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                      +.       +.|++|+|+|..
T Consensus       227 ~~-------~~DvVi~~~g~~  240 (369)
T 2eez_A          227 VQ-------HADLLIGAVLVP  240 (369)
T ss_dssp             HH-------HCSEEEECCC--
T ss_pred             Hh-------CCCEEEECCCCC
Confidence            43       579999999853

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.06  E-value=4e-06  Score=80.08  Aligned_cols=79  Identities=18%  Similarity=0.223  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++||||++|||+++++.+...|++|++++|+.++           .+.+.+.+...   .+|.++.+..+++.+..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~-----------~~~~~~~g~~~---~~~~~~~~~~~~~~~~~  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK-----------AQSALKAGAWQ---VINYREEDLVERLKEIT  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH-----------HHHHHHHTCSE---EEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCCE---EEECCCccHHHHHHHHh
Confidence            58999999999999999999999999999999987643           22233345432   34777665554444332


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      .  .+++|++|+|+|
T Consensus       206 ~--~~~~D~vi~~~g  218 (327)
T 1qor_A          206 G--GKKVRVVYDSVG  218 (327)
T ss_dssp             T--TCCEEEEEECSC
T ss_pred             C--CCCceEEEECCc
Confidence            1  236999999999

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.06  E-value=4.8e-06  Score=79.77  Aligned_cols=80  Identities=18%  Similarity=0.264  Sum_probs=58.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++||||++|||+++++.+...|++|++++|+.++           .+.+.+.+...   .+|.++.+..+++.+..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~-----------~~~~~~~g~~~---~~d~~~~~~~~~i~~~~  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK-----------AETARKLGCHH---TINYSTQDFAEVVREIT  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHHTCSE---EEETTTSCHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCCE---EEECCCHHHHHHHHHHh
Confidence            58999999999999999999999999999999998643           22233345432   34777665544443332


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .  ..++|++|+|+|.
T Consensus       211 ~--~~~~d~vi~~~g~  224 (333)
T 1wly_A          211 G--GKGVDVVYDSIGK  224 (333)
T ss_dssp             T--TCCEEEEEECSCT
T ss_pred             C--CCCCeEEEECCcH
Confidence            1  2379999999995

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.02  E-value=7.4e-06  Score=82.15  Aligned_cols=80  Identities=15%  Similarity=0.302  Sum_probs=59.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++++++++|+|+ ||+|+++++.|+++ |++|++++|+.++           ++.+.+. ..+..+.+|+++.+++.++
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~k-----------a~~la~~-~~~~~~~~D~~d~~~l~~~   85 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLAN-----------AQALAKP-SGSKAISLDVTDDSALDKV   85 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHH-----------HHHHHGG-GTCEEEECCTTCHHHHHHH
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHH-----------HHHHHHh-cCCcEEEEecCCHHHHHHH
Confidence            4578899999998 99999999999998 7899999998653           2222222 2345667899998887766


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                      ++       ++|+|||+++..
T Consensus        86 l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           86 LA-------DNDVVISLIPYT   99 (467)
T ss_dssp             HH-------TSSEEEECSCGG
T ss_pred             Hc-------CCCEEEECCchh
Confidence            54       689999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.02  E-value=3.7e-06  Score=78.30  Aligned_cols=78  Identities=19%  Similarity=0.241  Sum_probs=54.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++|+++|+|+ ||+|+++++.|++.|++|++++|+.+++       ++..+++...+ .+     ++.+.+++     
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~-------~~la~~~~~~~-~~-----~~~~~~~~-----  176 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA-------EELAKLFAHTG-SI-----QALSMDEL-----  176 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH-------HHHHHHTGGGS-SE-----EECCSGGG-----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHH-------HHHHHHhhccC-Ce-----eEecHHHh-----
Confidence            578999999999 6999999999999999999999986542       22233332211 22     22332221     


Q ss_pred             HHHHhcCCccEEEeccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISL  106 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~  106 (406)
                        . . ++.|++|||+|....
T Consensus       177 --~-~-~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          177 --E-G-HEFDLIINATSSGIS  193 (271)
T ss_dssp             --T-T-CCCSEEEECCSCGGG
T ss_pred             --c-c-CCCCEEEECCCCCCC
Confidence              1 1 689999999997643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.00  E-value=5e-06  Score=79.98  Aligned_cols=80  Identities=23%  Similarity=0.364  Sum_probs=58.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+||++|||+++++.+...|++|++++|+.++           .+.+. +.|...   .+|.++.+++.+.+.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~-----------~~~~~~~~g~~~---~~d~~~~~~~~~~~~~  220 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEK-----------VDLLKTKFGFDD---AFNYKEESDLTAALKR  220 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTSCCSE---EEETTSCSCSHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHHcCCce---EEecCCHHHHHHHHHH
Confidence            58999999999999999999999999999999987643           22333 345432   3477665445555554


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +..  +++|++|+|+|.
T Consensus       221 ~~~--~~~d~vi~~~g~  235 (345)
T 2j3h_A          221 CFP--NGIDIYFENVGG  235 (345)
T ss_dssp             HCT--TCEEEEEESSCH
T ss_pred             HhC--CCCcEEEECCCH
Confidence            432  579999999984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.98  E-value=4.1e-06  Score=69.39  Aligned_cols=79  Identities=13%  Similarity=0.216  Sum_probs=55.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+++++.++|+|+ |++|+.+++.|.+.|++|++++|+.++.           +.+...+  ...+..|.++.+.+.++ 
T Consensus         2 ~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~-----------~~~~~~~--~~~~~~d~~~~~~l~~~-   66 (144)
T 2hmt_A            2 GRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-----------NAYASYA--THAVIANATEENELLSL-   66 (144)
T ss_dssp             ----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-----------HTTTTTC--SEEEECCTTCHHHHHTT-
T ss_pred             CCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-----------HHHHHhC--CEEEEeCCCCHHHHHhc-
Confidence            3577888999998 9999999999999999999999875431           1122222  34567888886654432 


Q ss_pred             HHHHHhcCCccEEEecccc
Q psy6113          85 NAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~  103 (406)
                           ..++.|++|++++.
T Consensus        67 -----~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 -----GIRNFEYVIVAIGA   80 (144)
T ss_dssp             -----TGGGCSEEEECCCS
T ss_pred             -----CCCCCCEEEECCCC
Confidence                 23578999999884

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.98  E-value=8.5e-06  Score=78.78  Aligned_cols=80  Identities=16%  Similarity=0.275  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++||||++|||+++++.+...|++|++++|+.++           .+.+++.|..   ..+|.++.+..+++.+..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~-----------~~~~~~~g~~---~~~~~~~~~~~~~~~~~~  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK-----------LQMAEKLGAA---AGFNYKKEDFSEATLKFT  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHTCS---EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHcCCc---EEEecCChHHHHHHHHHh
Confidence            58999999999999999999999999999999987653           2223344543   235666655444433221


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        ..+++|++|+|+|.
T Consensus       228 --~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          228 --KGAGVNLILDCIGG  241 (354)
T ss_dssp             --TTSCEEEEEESSCG
T ss_pred             --cCCCceEEEECCCc
Confidence              11379999999995

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.95  E-value=1.4e-05  Score=77.23  Aligned_cols=80  Identities=26%  Similarity=0.342  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|||+++++.+...|++|++++|++++           .+..++.|..   ..+|.++.+..+++.+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~-----------~~~~~~~ga~---~~~d~~~~~~~~~~~~~~  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-----------QKIVLQNGAH---EVFNHREVNYIDKIKKYV  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCS---EEEETTSTTHHHHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhH-----------HHHHHHcCCC---EEEeCCCchHHHHHHHHc
Confidence            58999999999999999999999999999999988653           2233444543   235776655444333221


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        ..+++|++|+|+|.
T Consensus       236 --~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          236 --GEKGIDIIIEMLAN  249 (351)
T ss_dssp             --CTTCEEEEEESCHH
T ss_pred             --CCCCcEEEEECCCh
Confidence              12379999999994

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.94  E-value=3.1e-05  Score=73.47  Aligned_cols=87  Identities=22%  Similarity=0.341  Sum_probs=58.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.+..+    ..++.++++....+ ......++.+.+++.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~----~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~  223 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYA----NAEKTVEKINSKTD-CKAQLFDIEDHEQLRKE  223 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHH----HHHHHHHHHHHHSS-CEEEEEETTCHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHH----HHHHHHHHhhhhcC-CceEEeccchHHHHHhh
Confidence            3578999999998 6999999999999999 8999999843211    13344445544322 22233466665554433


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                      +       ...|++||+....
T Consensus       224 l-------~~aDiIINaTp~G  237 (315)
T 3tnl_A          224 I-------AESVIFTNATGVG  237 (315)
T ss_dssp             H-------HTCSEEEECSSTT
T ss_pred             h-------cCCCEEEECccCC
Confidence            2       2579999987643

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.93  E-value=1.2e-05  Score=76.90  Aligned_cols=79  Identities=25%  Similarity=0.374  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+++|||.++++.+...|++|++++|+.++           .+.+ ++.|...   ..|.++.+..+.+.+.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-----------~~~~~~~~g~~~---~~~~~~~~~~~~~~~~  214 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEK-----------CRFLVEELGFDG---AIDYKNEDLAAGLKRE  214 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCCSE---EEETTTSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHHcCCCE---EEECCCHHHHHHHHHh
Confidence            58999999999999999999999999999999987653           2333 4445432   2466665443333332


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      .   .+++|++|+|+|.
T Consensus       215 ~---~~~~d~vi~~~g~  228 (336)
T 4b7c_A          215 C---PKGIDVFFDNVGG  228 (336)
T ss_dssp             C---TTCEEEEEESSCH
T ss_pred             c---CCCceEEEECCCc
Confidence            2   2579999999994

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.92  E-value=1.9e-05  Score=65.59  Aligned_cols=76  Identities=20%  Similarity=0.305  Sum_probs=57.6

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ++.+.++|+|+ |.+|+++++.|.++|++|+++++++++           .+.+...+  +.++..|.++++.++++   
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~-----------~~~~~~~~--~~~~~gd~~~~~~l~~~---   66 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEK-----------IELLEDEG--FDAVIADPTDESFYRSL---   66 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH-----------HHHHHHTT--CEEEECCTTCHHHHHHS---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHH-----------HHHHHHCC--CcEEECCCCCHHHHHhC---
Confidence            45678999998 669999999999999999999997653           33344444  45678899999876553   


Q ss_pred             HHHhcCCccEEEeccc
Q psy6113          87 AVDKFGGIDILVNNAS  102 (406)
Q Consensus        87 i~~~~g~iD~linnAG  102 (406)
                         ...+.|++|.+.+
T Consensus        67 ---~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 ---DLEGVSAVLITGS   79 (141)
T ss_dssp             ---CCTTCSEEEECCS
T ss_pred             ---CcccCCEEEEecC
Confidence               2347899998877

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.91  E-value=1.2e-05  Score=77.73  Aligned_cols=79  Identities=16%  Similarity=0.297  Sum_probs=55.6

Q ss_pred             CC--cEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHH
Q psy6113           8 SG--LTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         8 ~g--k~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .|  ++++||||++|||+++++.+...|+ +|++++|+.++           .+.+.+ .|..   ..+|.++.+..+.+
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~-----------~~~~~~~~g~~---~~~d~~~~~~~~~~  223 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK-----------CILLTSELGFD---AAINYKKDNVAEQL  223 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHH-----------HHHHHHTSCCS---EEEETTTSCHHHHH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHH-----------HHHHHHHcCCc---eEEecCchHHHHHH
Confidence            46  9999999999999999999999999 99999987543           223333 4443   23577664433332


Q ss_pred             HHHHHHhcCCccEEEecccc
Q psy6113          84 VNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~  103 (406)
                       .+...  +++|++|+|+|.
T Consensus       224 -~~~~~--~~~d~vi~~~G~  240 (357)
T 2zb4_A          224 -RESCP--AGVDVYFDNVGG  240 (357)
T ss_dssp             -HHHCT--TCEEEEEESCCH
T ss_pred             -HHhcC--CCCCEEEECCCH
Confidence             22211  379999999993

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.89  E-value=1.5e-05  Score=76.72  Aligned_cols=80  Identities=18%  Similarity=0.339  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|||+++|||+++++.+... |++|+++++++++           .+.+++.|...   .+|.++.+..+++ .+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~-----------~~~~~~~g~~~---~~~~~~~~~~~~~-~~  234 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA-----------VEAAKRAGADY---VINASMQDPLAEI-RR  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH-----------HHHHHHHTCSE---EEETTTSCHHHHH-HH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHhCCCE---EecCCCccHHHHH-HH
Confidence            5899999999999999999999999 9999999987653           22233445432   2466664433332 22


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +... +++|++|+|+|.
T Consensus       235 ~~~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          235 ITES-KGVDAVIDLNNS  250 (347)
T ss_dssp             HTTT-SCEEEEEESCCC
T ss_pred             HhcC-CCceEEEECCCC
Confidence            2111 589999999995

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.81  E-value=3.5e-05  Score=74.38  Aligned_cols=79  Identities=23%  Similarity=0.331  Sum_probs=57.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|||.++++.+...|++|++++|+.++           .+.+++.|....   +|.++.+..+.+.+..
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~~---~~~~~~~~~~~~~~~~  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGK-----------CEACERLGAKRG---INYRSEDFAAVIKAET  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHHTCSEE---EETTTSCHHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHhcCCCEE---EeCCchHHHHHHHHHh
Confidence            58999999999999999999999999999999988754           233344554332   4555554444433322


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                         .+++|++|+|+|.
T Consensus       233 ---~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 ---GQGVDIILDMIGA  245 (353)
T ss_dssp             ---SSCEEEEEESCCG
T ss_pred             ---CCCceEEEECCCH
Confidence               4579999999995

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.73  E-value=3.7e-05  Score=76.64  Aligned_cols=85  Identities=21%  Similarity=0.230  Sum_probs=61.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeee--cCC---------C
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV--DIR---------D   76 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~--Dl~---------~   76 (406)
                      .|++++|+||++|||.+.++.+...|++|++++++.++           .+.+++.|....+...  |+.         +
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~-----------~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~  288 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK-----------EAAVRALGCDLVINRAELGITDDIADDPRRV  288 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCCCEEEHHHHTCCTTGGGCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHhcCCCEEEeccccccccccccccccc
Confidence            58999999999999999999999999999999876543           2334555654333222  221         2


Q ss_pred             hHHHHHHHHHHHHhcC-CccEEEecccc
Q psy6113          77 EHAVQSAVNAAVDKFG-GIDILVNNASA  103 (406)
Q Consensus        77 ~~~v~~~~~~i~~~~g-~iD~linnAG~  103 (406)
                      .++.+.+.+++.+..+ ++|++|+|+|.
T Consensus       289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          289 VETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             chhhhHHHHHHHHHhCCCceEEEECCCc
Confidence            3455666677766655 69999999995

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.70  E-value=6.1e-05  Score=72.34  Aligned_cols=79  Identities=18%  Similarity=0.238  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+++|+|+++++.+...|++|++++|+.++           .+.+.+.|...   .+|.++.+-.++ +.++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~-----------~~~~~~~ga~~---~~d~~~~~~~~~-~~~~  230 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDK-----------LRRAKALGADE---TVNYTHPDWPKE-VRRL  230 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHHTCSE---EEETTSTTHHHH-HHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHhcCCCE---EEcCCcccHHHH-HHHH
Confidence            58999999999999999999999999999999987653           22233445432   247766542222 2222


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      . ..+++|++|+|+|
T Consensus       231 ~-~~~~~d~vi~~~g  244 (343)
T 2eih_A          231 T-GGKGADKVVDHTG  244 (343)
T ss_dssp             T-TTTCEEEEEESSC
T ss_pred             h-CCCCceEEEECCC
Confidence            1 1237999999999

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.69  E-value=8.5e-05  Score=71.24  Aligned_cols=80  Identities=10%  Similarity=0.180  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+++|||.+.++.+...|++|++++++.++.           +.+++.|....   +|.++.+..+.+.+..
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-----------~~~~~lga~~~---~~~~~~~~~~~~~~~~  209 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT-----------EELLRLGAAYV---IDTSTAPLYETVMELT  209 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH-----------HHHHHHTCSEE---EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-----------HHHHhCCCcEE---EeCCcccHHHHHHHHh
Confidence            589999999999999999999999999999999988752           22334454432   3555544333322211


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        ...++|++|+|+|.
T Consensus       210 --~~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 --NGIGADAAIDSIGG  223 (340)
T ss_dssp             --TTSCEEEEEESSCH
T ss_pred             --CCCCCcEEEECCCC
Confidence              12379999999995

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.63  E-value=0.0001  Score=68.92  Aligned_cols=81  Identities=21%  Similarity=0.260  Sum_probs=55.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.       ++.++++......+.....+..+   +.+.+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a-------~~la~~~~~~~~~~~i~~~~~~~---l~~~l  192 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA-------QALADVINNAVGREAVVGVDARG---IEDVI  192 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHH-------HHHHHHHHHHHTSCCEEEECSTT---HHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHH-------HHHHHHHHhhcCCceEEEcCHHH---HHHHH
Confidence            578999999998 7999999999999999 799999987653       33445554432222222333323   22222


Q ss_pred             HHHHHhcCCccEEEeccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~  104 (406)
                      .       ..|++||+....
T Consensus       193 ~-------~~DiVInaTp~G  205 (283)
T 3jyo_A          193 A-------AADGVVNATPMG  205 (283)
T ss_dssp             H-------HSSEEEECSSTT
T ss_pred             h-------cCCEEEECCCCC
Confidence            2       369999987643

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.60  E-value=0.0001  Score=70.84  Aligned_cols=77  Identities=23%  Similarity=0.425  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|||.+.++.+...|++|++++++.++.           +.+++.|....   .|..  ++   +.+.+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-----------~~~~~~ga~~v---~~~~--~~---~~~~v  219 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-----------EFVKSVGADIV---LPLE--EG---WAKAV  219 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-----------HHHHHHTCSEE---EESS--TT---HHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-----------HHHHhcCCcEE---ecCc--hh---HHHHH
Confidence            589999999999999999999999999999999987642           23334454332   2333  22   23333


Q ss_pred             HHhcC--CccEEEecccc
Q psy6113          88 VDKFG--GIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g--~iD~linnAG~  103 (406)
                      .+..+  ++|++|+|+|.
T Consensus       220 ~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          220 REATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             HHHTTTSCEEEEEESCC-
T ss_pred             HHHhCCCCceEEEECCch
Confidence            33332  69999999995

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.55  E-value=9.9e-05  Score=70.55  Aligned_cols=80  Identities=18%  Similarity=0.302  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|||.+.++.+...|++|++++++.++           .+..++.|...   ..|.++.+..+.+.+..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-----------~~~~~~~ga~~---~~~~~~~~~~~~~~~~~  213 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK-----------LKIAKEYGAEY---LINASKEDILRQVLKFT  213 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCSE---EEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCcE---EEeCCCchHHHHHHHHh
Confidence            58999999999999999999999999999999997653           23344455432   23555544333332211


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        ...++|++|+|+|.
T Consensus       214 --~~~g~D~vid~~g~  227 (334)
T 3qwb_A          214 --NGKGVDASFDSVGK  227 (334)
T ss_dssp             --TTSCEEEEEECCGG
T ss_pred             --CCCCceEEEECCCh
Confidence              12369999999994

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.54  E-value=0.00014  Score=72.61  Aligned_cols=85  Identities=21%  Similarity=0.251  Sum_probs=63.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeee--c--------CCCh
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV--D--------IRDE   77 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~--D--------l~~~   77 (406)
                      .|++++|+||+|++|...++.+...|++|++++++.++           .+.+++.|....+...  |        ..+.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~-----------~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~  296 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQK-----------AEICRAMGAEAIIDRNAEGYRFWKDENTQDP  296 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHHTCCEEEETTTTTCCSEEETTEECH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHH-----------HHHHHhhCCcEEEecCcCcccccccccccch
Confidence            58999999999999999999999999999998876543           3344555654332221  2        2456


Q ss_pred             HHHHHHHHHHHHhcC--CccEEEecccc
Q psy6113          78 HAVQSAVNAAVDKFG--GIDILVNNASA  103 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g--~iD~linnAG~  103 (406)
                      ++.+++.+++.+..+  ++|++|+++|.
T Consensus       297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          297 KEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            777778888877653  79999999994

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.51  E-value=0.00021  Score=67.34  Aligned_cols=101  Identities=11%  Similarity=0.078  Sum_probs=63.9

Q ss_pred             ccCCcE-EEEecCCc-----------------h-HHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH----
Q psy6113           6 KLSGLT-IFITGASR-----------------G-IGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED----   62 (406)
Q Consensus         6 ~l~gk~-alVTGas~-----------------G-IG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~----   62 (406)
                      ++.||. +|||+|+.                 | .|.++|++++++|+.|++++|... +......+.. ...+..    
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~-~~~~~~~~~~  110 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPP-QTWLSALRPS  110 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCH-HHHHHHCEEC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCc-cchhhhhccc
Confidence            478888 99997754                 6 999999999999999999988654 2211000000 000110    


Q ss_pred             --cCCeeeeeeecCCChHHHHHHHHHH------------------------------HHhcCCccEEEecccccccCC
Q psy6113          63 --AGGNCLPCIVDIRDEHAVQSAVNAA------------------------------VDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        63 --~g~~~~~~~~Dl~~~~~v~~~~~~i------------------------------~~~~g~iD~linnAG~~~~~~  108 (406)
                        ....+..+.+|+...++..+.+...                              .+.++..|++|.+|++....+
T Consensus       111 ~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~~  188 (313)
T 1p9o_A          111 GPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFYV  188 (313)
T ss_dssp             CC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEEC
T ss_pred             cccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhccC
Confidence              0112334556666666666555443                              345688999999999976543

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.50  E-value=0.00014  Score=67.55  Aligned_cols=77  Identities=25%  Similarity=0.289  Sum_probs=52.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.       ++.++++...+ .+..  +|+   +++.    
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a-------~~l~~~~~~~~-~~~~--~~~---~~~~----  177 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT-------KELAERFQPYG-NIQA--VSM---DSIP----  177 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH-------HHHHHHHGGGS-CEEE--EEG---GGCC----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHccccC-CeEE--eeH---HHhc----
Confidence            578999999998 7999999999999999999999987642       22333332222 2211  232   1110    


Q ss_pred             HHHHhcCCccEEEecccccc
Q psy6113          86 AAVDKFGGIDILVNNASAIS  105 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~  105 (406)
                         +  +..|++||+++...
T Consensus       178 ---~--~~~DivIn~t~~~~  192 (272)
T 1p77_A          178 ---L--QTYDLVINATSAGL  192 (272)
T ss_dssp             ---C--SCCSEEEECCCC--
T ss_pred             ---c--CCCCEEEECCCCCC
Confidence               1  57999999999754

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.50  E-value=0.00013  Score=69.52  Aligned_cols=78  Identities=17%  Similarity=0.239  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|+|++.++.+...|++|+++++++++           .+.+++.|...   ..|.++.+..+.    +
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-----------~~~~~~~Ga~~---~~~~~~~~~~~~----~  201 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEK-----------AAHAKALGAWE---TIDYSHEDVAKR----V  201 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHH-----------HHHHHHHTCSE---EEETTTSCHHHH----H
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCCE---EEeCCCccHHHH----H
Confidence            58999999999999999999999999999999987654           22334455432   235555443333    3


Q ss_pred             HHhc--CCccEEEecccc
Q psy6113          88 VDKF--GGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~--g~iD~linnAG~  103 (406)
                      .+..  .++|++|+|+|.
T Consensus       202 ~~~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          202 LELTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             HHHTTTCCEEEEEESSCG
T ss_pred             HHHhCCCCceEEEECCCh
Confidence            3332  379999999995

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.49  E-value=0.00014  Score=70.52  Aligned_cols=76  Identities=16%  Similarity=0.273  Sum_probs=53.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC---CCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA---EPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~---~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +++|++++|+|+ +|+|..+++.+...|++|++++++.   ++           .+.+++.|...  +  | .+  ++.+
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-----------~~~~~~~ga~~--v--~-~~--~~~~  238 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVE-----------QTVIEETKTNY--Y--N-SS--NGYD  238 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHH-----------HHHHHHHTCEE--E--E-CT--TCSH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHH-----------HHHHHHhCCce--e--c-hH--HHHH
Confidence            345999999999 9999999999999999999999987   32           23334455432  2  5 44  2222


Q ss_pred             HHHHHHHhcCCccEEEecccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~  103 (406)
                      .+.+ . . +++|++|+++|.
T Consensus       239 ~~~~-~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          239 KLKD-S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             HHHH-H-H-CCEEEEEECCCC
T ss_pred             HHHH-h-C-CCCCEEEECCCC
Confidence            2222 1 2 689999999995

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.40  E-value=0.00023  Score=68.07  Aligned_cols=152  Identities=11%  Similarity=0.098  Sum_probs=89.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-------eEEEEecC----CCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA-------NIVIAAKT----AEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE   77 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~   77 (406)
                      ...++||||+|.+|..++..|+.+|.       .|++.+++    .++       .+....++......+   ..|+...
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~-------~~g~~~dl~~~~~~~---~~~i~~~   74 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKA-------LQGVMMEIDDCAFPL---LAGMTAH   74 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHH-------HHHHHHHHHTTTCTT---EEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCcccccc-------chhhHHHHhhhcccc---cCcEEEe
Confidence            35799999999999999999999985       79998887    322       111223333311111   1244333


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      .+..+       .+...|++|+.||.....                                                  
T Consensus        75 ~~~~~-------al~~aD~Vi~~ag~~~~~--------------------------------------------------   97 (329)
T 1b8p_A           75 ADPMT-------AFKDADVALLVGARPRGP--------------------------------------------------   97 (329)
T ss_dssp             SSHHH-------HTTTCSEEEECCCCCCCT--------------------------------------------------
T ss_pred             cCcHH-------HhCCCCEEEEeCCCCCCC--------------------------------------------------
Confidence            33222       344679999999864321                                                  


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCC--------CCCCccCCchhhhHh
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLN--------LNPFWFKNHVAYTIS  229 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~--------~~~~~~~~~~~Y~as  229 (406)
                                  ..+.   ...+..|+.....+++.+..+-  ...++||++|.+..        ..+. +|..-.|+.+
T Consensus        98 ------------g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~~~~-~p~~~v~g~t  159 (329)
T 1b8p_A           98 ------------GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKSAPS-LPAKNFTAML  159 (329)
T ss_dssp             ------------TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTT-SCGGGEEECC
T ss_pred             ------------CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHHcCC-CCHHHEEEee
Confidence                        1222   2356778777777776664321  13568999987541        1111 2333347777


Q ss_pred             hHHHHHHHHHHHHhhc
Q psy6113         230 KYGMSMCALGMAEEFK  245 (406)
Q Consensus       230 Kaal~~l~~~la~e~~  245 (406)
                      +.--..+...++..+.
T Consensus       160 ~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          160 RLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHhC
Confidence            6555556666776664

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.40  E-value=0.00038  Score=66.88  Aligned_cols=79  Identities=11%  Similarity=0.162  Sum_probs=55.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++++|+||++|||.+.++.+...|++|++++++.++           .+.+++.|....   .|..+.+-.+.+.+.. 
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~-----------~~~~~~~Ga~~~---~~~~~~~~~~~v~~~~-  229 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ-----------IALLKDIGAAHV---LNEKAPDFEATLREVM-  229 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG-----------HHHHHHHTCSEE---EETTSTTHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCCEE---EECCcHHHHHHHHHHh-
Confidence            4899999999999999999999999999999988765           223344554322   3555543333332222 


Q ss_pred             HhcCCccEEEecccc
Q psy6113          89 DKFGGIDILVNNASA  103 (406)
Q Consensus        89 ~~~g~iD~linnAG~  103 (406)
                      . ..++|++|+|+|.
T Consensus       230 ~-~~g~D~vid~~g~  243 (349)
T 3pi7_A          230 K-AEQPRIFLDAVTG  243 (349)
T ss_dssp             H-HHCCCEEEESSCH
T ss_pred             c-CCCCcEEEECCCC
Confidence            1 1379999999995

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.38  E-value=0.00052  Score=64.94  Aligned_cols=86  Identities=27%  Similarity=0.361  Sum_probs=56.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++.+    +.++.++++... +..+.  ..+..+.+...+
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~----~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~  216 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFE----KAVAFAKRVNENTDCVVT--VTDLADQHAFTE  216 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHH----HHHHHHHHHHHHSSCEEE--EEETTCHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHH----HHHHHHHHhhhccCcceE--EechHhhhhhHh
Confidence            3578999999998 8999999999999998 8999999944211    123344444433 22332  335555432222


Q ss_pred             HHHHHHHhcCCccEEEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~  104 (406)
                      .+       ...|++||+....
T Consensus       217 ~l-------~~~DiIINaTp~G  231 (312)
T 3t4e_A          217 AL-------ASADILTNGTKVG  231 (312)
T ss_dssp             HH-------HHCSEEEECSSTT
T ss_pred             hc-------cCceEEEECCcCC
Confidence            22       2469999987654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.37  E-value=0.00024  Score=68.69  Aligned_cols=79  Identities=15%  Similarity=0.294  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|+|...++.+...|++|++++++.++           .+.+++.|....   +|..+.+ +.+.+.+.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~-----------~~~~~~~Ga~~~---~~~~~~~-~~~~~~~~  227 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK-----------SAFLKSLGCDRP---INYKTEP-VGTVLKQE  227 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCSEE---EETTTSC-HHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHH-----------HHHHHHcCCcEE---EecCChh-HHHHHHHh
Confidence            58999999999999999999999999999999987543           233444554322   3444432 22222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .  .+++|++|+|+|.
T Consensus       228 ~--~~g~D~vid~~g~  241 (362)
T 2c0c_A          228 Y--PEGVDVVYESVGG  241 (362)
T ss_dssp             C--TTCEEEEEECSCT
T ss_pred             c--CCCCCEEEECCCH
Confidence            1  2479999999984

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.36  E-value=0.00036  Score=66.80  Aligned_cols=77  Identities=23%  Similarity=0.313  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+ +|+|+..++.+...|++|++++|++++           .+.+++.|...   .+|.++.+-.+. +.++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~---~~d~~~~~~~~~-~~~~  227 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK-----------LELAKELGADL---VVNPLKEDAAKF-MKEK  227 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH-----------HHHHHHTTCSE---EECTTTSCHHHH-HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHCCCCE---EecCCCccHHHH-HHHH
Confidence            5889999999 889999999999999999999987653           23334455432   246665432222 2222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                         .+++|++|+++|.
T Consensus       228 ---~~~~d~vid~~g~  240 (339)
T 1rjw_A          228 ---VGGVHAAVVTAVS  240 (339)
T ss_dssp             ---HSSEEEEEESSCC
T ss_pred             ---hCCCCEEEECCCC
Confidence               2689999999995

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.32  E-value=0.00033  Score=65.82  Aligned_cols=74  Identities=19%  Similarity=0.271  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+++|+|++.++.+...|++|+.+++++++.+           .+++.|...   ..|..+.++   +.+.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-----------~~~~~ga~~---~~~~~~~~~---~~~~~  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-----------LPLALGAEE---AATYAEVPE---RAKAW  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-----------HHHHTTCSE---EEEGGGHHH---HHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------HHHhcCCCE---EEECCcchh---HHHHh
Confidence            5899999999999999999999999999999999876532           223345432   235444112   22222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                          +++|++|+ +|.
T Consensus       188 ----~~~d~vid-~g~  198 (302)
T 1iz0_A          188 ----GGLDLVLE-VRG  198 (302)
T ss_dssp             ----TSEEEEEE-CSC
T ss_pred             ----cCceEEEE-CCH
Confidence                68999999 884

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.25  E-value=0.00045  Score=66.30  Aligned_cols=78  Identities=14%  Similarity=0.274  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++++|.+.++.+...|++|++++++.++           .+.+++.|....   .|..+  +..+.+.++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~--~~~~~~~~~  213 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNET-----------IEWTKKMGADIV---LNHKE--SLLNQFKTQ  213 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHH-----------HHHHHHHTCSEE---ECTTS--CHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHhcCCcEE---EECCc--cHHHHHHHh
Confidence            68999999999999999999999999999999887653           233444564322   23332  222222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        ..+++|++|+++|.
T Consensus       214 --~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          214 --GIELVDYVFCTFNT  227 (346)
T ss_dssp             --TCCCEEEEEESSCH
T ss_pred             --CCCCccEEEECCCc
Confidence              23479999999984

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.20  E-value=0.00061  Score=65.94  Aligned_cols=78  Identities=19%  Similarity=0.171  Sum_probs=53.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .+++++++|+|+ ||+|+++++.+...|++|++++|+.+++           +.+.+.+...  +.++..+.+++.+.+ 
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~-  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-----------SYLETLFGSR--VELLYSNSAEIETAV-  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-----------HHHHHHHGGG--SEEEECCHHHHHHHH-
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-----------HHHHHhhCce--eEeeeCCHHHHHHHH-
Confidence            467899999999 9999999999999999999999987542           2222222111  112223444433322 


Q ss_pred             HHHHhcCCccEEEeccccc
Q psy6113          86 AAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~  104 (406)
                            ...|++||+++..
T Consensus       229 ------~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 ------AEADLLIGAVLVP  241 (361)
T ss_dssp             ------HTCSEEEECCCCT
T ss_pred             ------cCCCEEEECCCcC
Confidence                  2689999999864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.15  E-value=0.00062  Score=64.05  Aligned_cols=39  Identities=31%  Similarity=0.428  Sum_probs=35.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k  177 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK  177 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence            578999999998 7999999999999998 89999998654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.13  E-value=0.0017  Score=60.50  Aligned_cols=37  Identities=16%  Similarity=0.248  Sum_probs=31.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      +++.|.|+ |.+|.++|+.|++.|++|++.+|+++.++
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~   41 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALD   41 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence            45666676 77999999999999999999999876543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.12  E-value=0.00067  Score=65.05  Aligned_cols=77  Identities=19%  Similarity=0.321  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||+++||++.++.+...|++|+++ ++.++           .+.+++.|...    +| .+.+ ..+.+.+.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~-----------~~~~~~lGa~~----i~-~~~~-~~~~~~~~  211 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD-----------LEYVRDLGATP----ID-ASRE-PEDYAAEH  211 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH-----------HHHHHHHTSEE----EE-TTSC-HHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH-----------HHHHHHcCCCE----ec-cCCC-HHHHHHHH
Confidence            58999999999999999999999999999988 55432           23344556543    34 3333 22223322


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      . ...++|++|+|+|.
T Consensus       212 ~-~~~g~D~vid~~g~  226 (343)
T 3gaz_A          212 T-AGQGFDLVYDTLGG  226 (343)
T ss_dssp             H-TTSCEEEEEESSCT
T ss_pred             h-cCCCceEEEECCCc
Confidence            2 12379999999993

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.11  E-value=0.0022  Score=61.03  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=31.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAE   44 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~   44 (406)
                      ...++||||+|.+|..++..|+++|  ..|++.+++++
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            3569999999999999999999999  78999988754

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.11  E-value=0.00097  Score=62.14  Aligned_cols=75  Identities=21%  Similarity=0.289  Sum_probs=52.2

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.       ++.++++...+ .+....  ..+   +    
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a-------~~la~~~~~~~-~~~~~~--~~~---l----  184 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKA-------EQLAELVAAYG-EVKAQA--FEQ---L----  184 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHH-------HHHHHHHGGGS-CEEEEE--GGG---C----
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHH-------HHHHHHhhccC-CeeEee--HHH---h----
Confidence            578999999998 6999999999999996 999999987642       23344443322 233322  111   1    


Q ss_pred             HHHHHhcCCccEEEeccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~  104 (406)
                            ....|++||+....
T Consensus       185 ------~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 ------KQSYDVIINSTSAS  198 (281)
T ss_dssp             ------CSCEEEEEECSCCC
T ss_pred             ------cCCCCEEEEcCcCC
Confidence                  04689999987654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.03  E-value=0.0013  Score=63.80  Aligned_cols=76  Identities=17%  Similarity=0.307  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|+|...++.+...|++|+.+++ .++           .+.+++.|....   +|..+.+-.    +++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~-----------~~~~~~lGa~~v---~~~~~~~~~----~~~  243 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDA-----------SELVRKLGADDV---IDYKSGSVE----EQL  243 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG-----------HHHHHHTTCSEE---EETTSSCHH----HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH-----------HHHHHHcCCCEE---EECCchHHH----HHH
Confidence            6899999999999999999999999999988874 332           233345564322   355543322    233


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .+ .+++|++|+++|.
T Consensus       244 ~~-~~g~D~vid~~g~  258 (375)
T 2vn8_A          244 KS-LKPFDFILDNVGG  258 (375)
T ss_dssp             HT-SCCBSEEEESSCT
T ss_pred             hh-cCCCCEEEECCCC
Confidence            32 3689999999995

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.01  E-value=0.0014  Score=63.78  Aligned_cols=78  Identities=14%  Similarity=0.182  Sum_probs=56.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+.|++++|+|+ |+||+++++.+...|++|++.+|+.++           .+.+.+ .+..+   .++..+.+++.++
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~-----------l~~~~~~~g~~~---~~~~~~~~~l~~~  228 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDK-----------LRQLDAEFCGRI---HTRYSSAYELEGA  228 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHTTTSS---EEEECCHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHH-----------HHHHHHhcCCee---EeccCCHHHHHHH
Confidence            3588999999998 999999999999999999999997653           222333 34332   2344455555444


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                      +.       ..|++|++++..
T Consensus       229 l~-------~aDvVi~~~~~p  242 (377)
T 2vhw_A          229 VK-------RADLVIGAVLVP  242 (377)
T ss_dssp             HH-------HCSEEEECCCCT
T ss_pred             Hc-------CCCEEEECCCcC
Confidence            32       579999999854

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.00  E-value=0.0022  Score=53.73  Aligned_cols=78  Identities=15%  Similarity=0.193  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ..+.++|.|+ |.+|+.+++.|.++|++|++++++.+.          ..+.+.. ....+.++..|.++++.++++   
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~----------~~~~~~~~~~~~~~~i~gd~~~~~~l~~a---   67 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED----------DIKQLEQRLGDNADVIPGDSNDSSVLKKA---   67 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH----------HHHHHHHHHCTTCEEEESCTTSHHHHHHH---
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChH----------HHHHHHHhhcCCCeEEEcCCCCHHHHHHc---
Confidence            3567888886 999999999999999999999997421          1122221 223367788999998865443   


Q ss_pred             HHHhcCCccEEEeccc
Q psy6113          87 AVDKFGGIDILVNNAS  102 (406)
Q Consensus        87 i~~~~g~iD~linnAG  102 (406)
                         ...+.|++|.+.+
T Consensus        68 ---~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 ---GIDRCRAILALSD   80 (153)
T ss_dssp             ---TTTTCSEEEECSS
T ss_pred             ---ChhhCCEEEEecC
Confidence               1346788888776

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.98  E-value=0.0014  Score=55.13  Aligned_cols=78  Identities=18%  Similarity=0.254  Sum_probs=55.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +..++.++|.|+ |.+|+.+++.|.+.|++|++++|++++.+.+           . ..+  ...+..|.++.+.+.+. 
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~-----------~~~~g--~~~~~~d~~~~~~l~~~-   80 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL-----------NSEFS--GFTVVGDAAEFETLKEC-   80 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS-----------CTTCC--SEEEESCTTSHHHHHTT-
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH-----------HhcCC--CcEEEecCCCHHHHHHc-
Confidence            567888999996 9999999999999999999999987754321           1 122  33456777776543321 


Q ss_pred             HHHHHhcCCccEEEecccc
Q psy6113          85 NAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~  103 (406)
                           ...+.|++|.+.+.
T Consensus        81 -----~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           81 -----GMEKADMVFAFTND   94 (155)
T ss_dssp             -----TGGGCSEEEECSSC
T ss_pred             -----CcccCCEEEEEeCC
Confidence                 13468999998873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.93  E-value=0.0012  Score=61.17  Aligned_cols=39  Identities=23%  Similarity=0.361  Sum_probs=35.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~  156 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAK  156 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHH
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            578999999998 6999999999999996 99999998764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.0016  Score=61.90  Aligned_cols=77  Identities=17%  Similarity=0.212  Sum_probs=50.7

Q ss_pred             Cc-EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GL-TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk-~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      |+ +++|+|+++|+|...++.+...|++|+.++++++++           +.+++.|....   +|..+.+  .+.++++
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-----------~~~~~lGa~~~---i~~~~~~--~~~~~~~  212 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-----------DYLRVLGAKEV---LAREDVM--AERIRPL  212 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-----------HHHHHTTCSEE---EECC-----------C
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-----------HHHHHcCCcEE---EecCCcH--HHHHHHh
Confidence            44 799999999999999999999999999999987652           23344554322   3444432  1222222


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        ..+++|++|+++|.
T Consensus       213 --~~~~~d~vid~~g~  226 (328)
T 1xa0_A          213 --DKQRWAAAVDPVGG  226 (328)
T ss_dssp             --CSCCEEEEEECSTT
T ss_pred             --cCCcccEEEECCcH
Confidence              12479999999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.91  E-value=0.0027  Score=51.71  Aligned_cols=75  Identities=17%  Similarity=0.268  Sum_probs=52.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|+++.           .+.+.... .+.++..|.++.+.+.+      
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~-----------~~~~~~~~-~~~~~~~d~~~~~~l~~------   64 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI-----------CKKASAEI-DALVINGDCTKIKTLED------   64 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHC-SSEEEESCTTSHHHHHH------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-----------HHHHHHhc-CcEEEEcCCCCHHHHHH------
Confidence            356888887 999999999999999999999987542           22333221 23456678887765432      


Q ss_pred             HhcCCccEEEeccc
Q psy6113          89 DKFGGIDILVNNAS  102 (406)
Q Consensus        89 ~~~g~iD~linnAG  102 (406)
                      ......|++|.+.+
T Consensus        65 ~~~~~~d~vi~~~~   78 (140)
T 1lss_A           65 AGIEDADMYIAVTG   78 (140)
T ss_dssp             TTTTTCSEEEECCS
T ss_pred             cCcccCCEEEEeeC
Confidence            12347899999976

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.87  E-value=0.0024  Score=61.65  Aligned_cols=74  Identities=23%  Similarity=0.359  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +|+|...++.+...|++|++++++.++           .+... +.|...   ..|..+.+.++     
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~-----------~~~~~~~lGa~~---v~~~~~~~~~~-----  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSK-----------KEEALKNFGADS---FLVSRDQEQMQ-----  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG-----------HHHHHHTSCCSE---EEETTCHHHHH-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHhcCCce---EEeccCHHHHH-----
Confidence            6899999996 999999999999999999999988764           12222 445432   24666644332     


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                        +..+++|++|+++|.
T Consensus       247 --~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          247 --AAAGTLDGIIDTVSA  261 (366)
T ss_dssp             --HTTTCEEEEEECCSS
T ss_pred             --HhhCCCCEEEECCCc
Confidence              223589999999985

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.81  E-value=0.0014  Score=60.90  Aligned_cols=43  Identities=26%  Similarity=0.262  Sum_probs=38.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL   49 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~   49 (406)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            578999999998 7999999999999998 899999998876554

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.76  E-value=0.0018  Score=62.56  Aligned_cols=76  Identities=18%  Similarity=0.312  Sum_probs=53.8

Q ss_pred             ccCCc--EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGL--TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk--~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +++||  .++|.|| |++|+.+|+.|++ .++|.+.+|+.++           .+.   ....+..+.+|++|.+++.++
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~-----------~~~---~~~~~~~~~~d~~d~~~l~~~   74 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNEN-----------LEK---VKEFATPLKVDASNFDKLVEV   74 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHH-----------HHH---HTTTSEEEECCTTCHHHHHHH
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHH-----------HHH---HhccCCcEEEecCCHHHHHHH
Confidence            34444  5888898 9999999999875 5789999987543           122   223456678999999988776


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                      ++       +.|++||+++..
T Consensus        75 ~~-------~~DvVi~~~p~~   88 (365)
T 3abi_A           75 MK-------EFELVIGALPGF   88 (365)
T ss_dssp             HT-------TCSEEEECCCGG
T ss_pred             Hh-------CCCEEEEecCCc
Confidence            65       579999998743

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.70  E-value=0.0021  Score=61.35  Aligned_cols=77  Identities=18%  Similarity=0.252  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+ +++|...++.+...|++|+.+++++++           .+.+++.|....   .|..+.+..+.    +
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~~---i~~~~~~~~~~----~  226 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAK-----------LNLARRLGAEVA---VNARDTDPAAW----L  226 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHTTCSEE---EETTTSCHHHH----H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHH-----------HHHHHHcCCCEE---EeCCCcCHHHH----H
Confidence            6899999997 899999999999999999999887653           334455665432   35554433333    3


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .+..+++|++|.++|.
T Consensus       227 ~~~~g~~d~vid~~g~  242 (340)
T 3s2e_A          227 QKEIGGAHGVLVTAVS  242 (340)
T ss_dssp             HHHHSSEEEEEESSCC
T ss_pred             HHhCCCCCEEEEeCCC
Confidence            3344689999999884

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.69  E-value=0.0028  Score=61.12  Aligned_cols=78  Identities=19%  Similarity=0.235  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+| ++++|...++.+...|++|++++++.++           .+.+++.|....   .| .+.+++.+.+.++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~-~~~~~~~~~v~~~  252 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREK-----------LDRAFALGADHG---IN-RLEEDWVERVYAL  252 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHTCSEE---EE-TTTSCHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchh-----------HHHHHHcCCCEE---Ec-CCcccHHHHHHHH
Confidence            589999999 8999999999999999999999987653           233445565332   34 4433333333333


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      .. ..++|++|+++|
T Consensus       253 ~~-g~g~D~vid~~g  266 (363)
T 3uog_A          253 TG-DRGADHILEIAG  266 (363)
T ss_dssp             HT-TCCEEEEEEETT
T ss_pred             hC-CCCceEEEECCC
Confidence            21 127999999999

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.68  E-value=0.0054  Score=58.00  Aligned_cols=31  Identities=35%  Similarity=0.499  Sum_probs=27.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEec
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAK   41 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r   41 (406)
                      .++||||+|.+|..++..|+..|.  .++++++
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di   34 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR   34 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence            489999999999999999999885  5888887

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.67  E-value=0.0053  Score=59.07  Aligned_cols=85  Identities=9%  Similarity=0.053  Sum_probs=53.7

Q ss_pred             CC-cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SG-LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~g-k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .| ++++|+||++++|...++.+...|++|+.++++.+++       .+..+.+++.|....+   |..+. ....+.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~-------~~~~~~~~~lGa~~vi---~~~~~-~~~~~~~~  234 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL-------DEVVASLKELGATQVI---TEDQN-NSREFGPT  234 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH-------HHHHHHHHHHTCSEEE---EHHHH-HCGGGHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcccc-------HHHHHHHHhcCCeEEE---ecCcc-chHHHHHH
Confidence            47 8999999999999999988888899999888766531       1122334555654322   22110 00122233


Q ss_pred             HHHh----cCCccEEEecccc
Q psy6113          87 AVDK----FGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~----~g~iD~linnAG~  103 (406)
                      +.+.    .+++|++|.++|.
T Consensus       235 i~~~t~~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          235 IKEWIKQSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHHHHHHTCCEEEEEESSCH
T ss_pred             HHHHhhccCCCceEEEECCCc
Confidence            3322    2479999999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.66  E-value=0.0075  Score=49.62  Aligned_cols=77  Identities=13%  Similarity=0.207  Sum_probs=55.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+++++ ++|.|+ |.+|+.+++.|.++|++|+++++++++           .+.+...+  +.++..|.++++.++++ 
T Consensus         4 ~~~~~~-viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~-----------~~~~~~~g--~~~i~gd~~~~~~l~~a-   67 (140)
T 3fwz_A            4 VDICNH-ALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTR-----------VDELRERG--VRAVLGNAANEEIMQLA-   67 (140)
T ss_dssp             CCCCSC-EEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH-----------HHHHHHTT--CEEEESCTTSHHHHHHT-
T ss_pred             ccCCCC-EEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHH-----------HHHHHHcC--CCEEECCCCCHHHHHhc-
Confidence            445554 566676 779999999999999999999998753           34444444  45678899998866543 


Q ss_pred             HHHHHhcCCccEEEeccc
Q psy6113          85 NAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG  102 (406)
                           ...+.|++|.+.+
T Consensus        68 -----~i~~ad~vi~~~~   80 (140)
T 3fwz_A           68 -----HLECAKWLILTIP   80 (140)
T ss_dssp             -----TGGGCSEEEECCS
T ss_pred             -----CcccCCEEEEECC
Confidence                 1235788887766

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.62  E-value=0.0065  Score=58.21  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|++|+++++++++           .+.+++.|....   .|.++ .+..+++.+.
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~~---~~~~~~~~~~~~i~~~  232 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRR-----------LEVAKNCGADVT---LVVDPAKEEESSIIER  232 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHTTCSEE---EECCTTTSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHH-----------HHHHHHhCCCEE---EcCcccccHHHHHHHH
Confidence            5899999997 899999999888899999888887653           233445565422   34443 2222222221


Q ss_pred             HHH-hcCCccEEEecccc
Q psy6113          87 AVD-KFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~-~~g~iD~linnAG~  103 (406)
                      ... ..+++|++|+++|.
T Consensus       233 ~~~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          233 IRSAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHHHSSSCCSEEEECSCC
T ss_pred             hccccCCCCCEEEECCCC
Confidence            110 02479999999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.61  E-value=0.0044  Score=59.94  Aligned_cols=79  Identities=18%  Similarity=0.324  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++           .+.+++.|....   +|.++ .+++.+.+.
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~~~~~~~~~~  256 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDK-----------FEKAKVFGATDF---VNPNDHSEPISQVLS  256 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-----------HHHHHHTTCCEE---ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH-----------HHHHHHhCCceE---EeccccchhHHHHHH
Confidence            5889999996 8999999998888999 79999887764           233345564322   34433 123333344


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +++|++|+++|.
T Consensus       257 ~~~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          257 KMTN--GGVDFSLECVGN  272 (374)
T ss_dssp             HHHT--SCBSEEEECSCC
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3332  489999999985

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.61  E-value=0.017  Score=54.33  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=27.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEec
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAK   41 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r   41 (406)
                      .++||||+|.+|.+++..|+..|.  .+++.++
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di   34 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI   34 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence            589999999999999999999885  6888888

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.60  E-value=0.013  Score=53.36  Aligned_cols=88  Identities=17%  Similarity=0.236  Sum_probs=56.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCC------------cccHHHHHHHHHHcCC--eeeee
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL------------PGTIYSAAKEVEDAGG--NCLPC   70 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~------------~~~i~~~~~~~~~~g~--~~~~~   70 (406)
                      +|++++++|.|+ ||+|..+++.|++.|. +|++++++.-....+            ..+.+.+.+.+.+.+.  ++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            577899999997 7999999999999997 899999876211100            1234445555655433  44455


Q ss_pred             eecCCChHHHHHHHHHHHHhcCCccEEEeccc
Q psy6113          71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        71 ~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG  102 (406)
                      ..++++ +.+.++       +...|++|++..
T Consensus       107 ~~~~~~-~~~~~~-------~~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAAL-------IAEHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHH-------HHTSSEEEECCS
T ss_pred             eccCCH-hHHHHH-------HhCCCEEEEeCC
Confidence            555542 233222       235788888765

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.60  E-value=0.0023  Score=61.34  Aligned_cols=77  Identities=22%  Similarity=0.383  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|+ +|++++|++++           .+.+++.|...   ..|..+.+-    .++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~-----------~~~~~~~Ga~~---~~~~~~~~~----~~~  227 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFR-----------RELAKKVGADY---VINPFEEDV----VKE  227 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHH-----------HHHHHHHTCSE---EECTTTSCH----HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHhCCCE---EECCCCcCH----HHH
Confidence            7899999999 9999999999999999 99999987543           23334455432   235544332    233


Q ss_pred             HHHhc--CCccEEEecccc
Q psy6113          87 AVDKF--GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~  103 (406)
                      +.+..  .++|++|+++|.
T Consensus       228 v~~~~~g~g~D~vid~~g~  246 (348)
T 2d8a_A          228 VMDITDGNGVDVFLEFSGA  246 (348)
T ss_dssp             HHHHTTTSCEEEEEECSCC
T ss_pred             HHHHcCCCCCCEEEECCCC
Confidence            33322  269999999984

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.57  E-value=0.0036  Score=59.95  Aligned_cols=69  Identities=16%  Similarity=0.302  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+ +++|...++.+...|++|+++++++++           .+.+++.|....+     ++.+.+.+     
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~v~-----~~~~~~~~-----  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHK-----------KQDALSMGVKHFY-----TDPKQCKE-----  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTT-----------HHHHHHTTCSEEE-----SSGGGCCS-----
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHH-----------HHHHHhcCCCeec-----CCHHHHhc-----
Confidence            5899999997 899999999988999999999998875           2334556654433     33332211     


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                           ++|++|.++|.
T Consensus       234 -----~~D~vid~~g~  244 (348)
T 3two_A          234 -----ELDFIISTIPT  244 (348)
T ss_dssp             -----CEEEEEECCCS
T ss_pred             -----CCCEEEECCCc
Confidence                 79999999985

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.55  E-value=0.015  Score=54.22  Aligned_cols=98  Identities=11%  Similarity=0.145  Sum_probs=63.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCC-----------cccHHHHHHHHHHcCC--eeee
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL-----------PGTIYSAAKEVEDAGG--NCLP   69 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~-----------~~~i~~~~~~~~~~g~--~~~~   69 (406)
                      ..+|++++|+|.|+ ||+|..+++.|++.|. ++.++|++.-....+           ..+.+.+.+.+.+.+.  ++..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            45788999999998 7999999999999997 899998765221111           1234445556666544  5556


Q ss_pred             eeecCCChHHHHHHHHHHHHh----cCCccEEEeccc
Q psy6113          70 CIVDIRDEHAVQSAVNAAVDK----FGGIDILVNNAS  102 (406)
Q Consensus        70 ~~~Dl~~~~~v~~~~~~i~~~----~g~iD~linnAG  102 (406)
                      +..++++.+.+..+++.+...    ....|++|.+..
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            666777766666666544321    135788776544

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.54  E-value=0.008  Score=57.68  Aligned_cols=78  Identities=18%  Similarity=0.323  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCC--ChHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIR--DEHAVQSAV   84 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~--~~~~v~~~~   84 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+++++++++           .+.+++.|....   .|..  +.++..   
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~~v---i~~~~~~~~~~~---  232 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATR-----------LSKAKEIGADLV---LQISKESPQEIA---  232 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH-----------HHHHHHTTCSEE---EECSSCCHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHhCCCEE---EcCcccccchHH---
Confidence            5889999996 8999999988888999 89999887653           233445565422   3444  223322   


Q ss_pred             HHHHHhc-CCccEEEecccc
Q psy6113          85 NAAVDKF-GGIDILVNNASA  103 (406)
Q Consensus        85 ~~i~~~~-g~iD~linnAG~  103 (406)
                      +++.+.. +++|++|+++|.
T Consensus       233 ~~i~~~~~~g~D~vid~~g~  252 (356)
T 1pl8_A          233 RKVEGQLGCKPEVTIECTGA  252 (356)
T ss_dssp             HHHHHHHTSCCSEEEECSCC
T ss_pred             HHHHHHhCCCCCEEEECCCC
Confidence            2332222 579999999984

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.53  E-value=0.0056  Score=58.90  Aligned_cols=81  Identities=20%  Similarity=0.185  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGAN-IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ |++|...++.+...|++ |+++++++++           .+.+++....+..+..|-.+.+++.+   +
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~a~~l~~~~~~~~~~~~~~~~~~~---~  243 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGR-----------LKFAKEICPEVVTHKVERLSAEESAK---K  243 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHH-----------HHHHHHHCTTCEEEECCSCCHHHHHH---H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHhchhcccccccccchHHHHH---H
Confidence            5889999998 99999999988889997 8888887654           22223333334344445445555443   3


Q ss_pred             HHHhc--CCccEEEecccc
Q psy6113          87 AVDKF--GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~  103 (406)
                      +.+..  .++|++|.++|.
T Consensus       244 v~~~t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          244 IVESFGGIEPAVALECTGV  262 (363)
T ss_dssp             HHHHTSSCCCSEEEECSCC
T ss_pred             HHHHhCCCCCCEEEECCCC
Confidence            44433  379999999984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.52  E-value=0.0033  Score=54.20  Aligned_cols=78  Identities=14%  Similarity=0.081  Sum_probs=55.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++.++.++|.|+ |.+|..+++.|.+. |++|++++|++++           .+.+...+  +..+..|.++++.+.++ 
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~-----------~~~~~~~g--~~~~~gd~~~~~~l~~~-  100 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEA-----------AQQHRSEG--RNVISGDATDPDFWERI-  100 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHH-----------HHHHHHTT--CCEEECCTTCHHHHHTB-
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHH-----------HHHHHHCC--CCEEEcCCCCHHHHHhc-
Confidence            355677888885 89999999999999 9999999998653           33344444  44566788887654321 


Q ss_pred             HHHHHhcCCccEEEeccc
Q psy6113          85 NAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG  102 (406)
                          ....+.|++|.+.+
T Consensus       101 ----~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 ----LDTGHVKLVLLAMP  114 (183)
T ss_dssp             ----CSCCCCCEEEECCS
T ss_pred             ----cCCCCCCEEEEeCC
Confidence                01346899998776

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.51  E-value=0.0047  Score=59.43  Aligned_cols=74  Identities=20%  Similarity=0.289  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCCh-HHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDE-HAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~-~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|++|+.++++++++           +.+++.|....   .|..+. +.    .++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~-----------~~~~~lGa~~v---~~~~~~~~~----~~~  239 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR-----------EDAMKMGADHY---IATLEEGDW----GEK  239 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH-----------HHHHHHTCSEE---EEGGGTSCH----HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH-----------HHHHHcCCCEE---EcCcCchHH----HHH
Confidence            5899999999 9999999998888999999999987752           22334554322   243333 21    222


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +.   +++|++|.++|.
T Consensus       240 ~~---~~~D~vid~~g~  253 (360)
T 1piw_A          240 YF---DTFDLIVVCASS  253 (360)
T ss_dssp             SC---SCEEEEEECCSC
T ss_pred             hh---cCCCEEEECCCC
Confidence            22   589999999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.43  E-value=0.0056  Score=59.20  Aligned_cols=79  Identities=19%  Similarity=0.352  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++           .+.+++.|....   +|.++ .+++.+.+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~~~~~~~~~~  255 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDK-----------FAKAKEVGATEC---VNPQDYKKPIQEVLT  255 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-----------HHHHHHTTCSEE---ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHhCCceE---ecccccchhHHHHHH
Confidence            5889999995 8999999998888999 79999887764           233345564322   34433 122333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +++|++|+++|.
T Consensus       256 ~~~~--~g~D~vid~~g~  271 (374)
T 2jhf_A          256 EMSN--GGVDFSFEVIGR  271 (374)
T ss_dssp             HHTT--SCBSEEEECSCC
T ss_pred             HHhC--CCCcEEEECCCC
Confidence            3322  479999999985

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.43  E-value=0.0057  Score=58.83  Aligned_cols=77  Identities=21%  Similarity=0.295  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+... |++|+.+++++++           .+.+++.|....   .|..+.  +.+.+.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~--~~~~v~~  248 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEK-----------LKLAERLGADHV---VDARRD--PVKQVME  248 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHH-----------HHHHHHTTCSEE---EETTSC--HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHH-----------HHHHHHhCCCEE---Eeccch--HHHHHHH
Confidence            5899999999 79999999888888 9999999987653           333445564332   355443  3333333


Q ss_pred             HHHhcC-CccEEEecccc
Q psy6113          87 AVDKFG-GIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g-~iD~linnAG~  103 (406)
                      +.  .+ ++|++|.++|.
T Consensus       249 ~~--~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          249 LT--RGRGVNVAMDFVGS  264 (359)
T ss_dssp             HT--TTCCEEEEEESSCC
T ss_pred             Hh--CCCCCcEEEECCCC
Confidence            21  13 79999999995

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.42  E-value=0.0067  Score=58.65  Aligned_cols=74  Identities=20%  Similarity=0.344  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|+|+ +++|...++.+...|++|++++++++++           +.+++.|...   .+|..+.+.++    ++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~-----------~~a~~lGa~~---vi~~~~~~~~~----~~  254 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-----------EAAKALGADE---VVNSRNADEMA----AH  254 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-----------HHHHHHTCSE---EEETTCHHHHH----TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-----------HHHHHcCCcE---EeccccHHHHH----Hh
Confidence            5889999998 7899999998888999999999887642           2333455432   23555544322    22


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .   +++|++|+++|.
T Consensus       255 ~---~g~Dvvid~~g~  267 (369)
T 1uuf_A          255 L---KSFDFILNTVAA  267 (369)
T ss_dssp             T---TCEEEEEECCSS
T ss_pred             h---cCCCEEEECCCC
Confidence            1   589999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.38  E-value=0.0034  Score=60.57  Aligned_cols=77  Identities=16%  Similarity=0.260  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHH-cCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAK-DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~-~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+||++++|...++.+.. .|++|+.+++++++           .+.+++.|....   .|-.+  +   +.++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~-----------~~~~~~lGad~v---i~~~~--~---~~~~  231 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPET-----------QEWVKSLGAHHV---IDHSK--P---LAAE  231 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHH-----------HHHHHHTTCSEE---ECTTS--C---HHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHH-----------HHHHHHcCCCEE---EeCCC--C---HHHH
Confidence            589999999999999988776655 58999999987653           333455665432   23333  2   2333


Q ss_pred             HHHhc-CCccEEEecccc
Q psy6113          87 AVDKF-GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~-g~iD~linnAG~  103 (406)
                      +.+.. +++|++|.++|.
T Consensus       232 v~~~~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          232 VAALGLGAPAFVFSTTHT  249 (363)
T ss_dssp             HHTTCSCCEEEEEECSCH
T ss_pred             HHHhcCCCceEEEECCCc
Confidence            33332 479999999984

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.37  E-value=0.011  Score=54.44  Aligned_cols=36  Identities=25%  Similarity=0.362  Sum_probs=34.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +|+++|.|+ ||.|++++..|++.|.+|++..|+.++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~k  153 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRG  153 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            899999997 899999999999999999999999876

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.37  E-value=0.0017  Score=61.73  Aligned_cols=37  Identities=24%  Similarity=0.425  Sum_probs=33.3

Q ss_pred             Cc-EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           9 GL-TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         9 gk-~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      |+ +++|+||++|+|...++.+...|++|+++++++++
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~  187 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA  187 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            44 79999999999999999998999999999998765

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.35  E-value=0.0082  Score=58.03  Aligned_cols=78  Identities=8%  Similarity=0.075  Sum_probs=54.1

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      -.|++++|+||++++|...++.+...|++|+.+. ++++           .+.+++.|....   .|..+.+-    .++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~-----------~~~~~~lGa~~v---i~~~~~~~----~~~  223 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN-----------FDLAKSRGAEEV---FDYRAPNL----AQT  223 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-----------HHHHHHTTCSEE---EETTSTTH----HHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH-----------HHHHHHcCCcEE---EECCCchH----HHH
Confidence            4789999999999999999999999999998875 3332           234455665322   35444432    233


Q ss_pred             HHHh-cCCccEEEecccc
Q psy6113          87 AVDK-FGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~-~g~iD~linnAG~  103 (406)
                      +.+. -+++|++|.++|.
T Consensus       224 v~~~t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          224 IRTYTKNNLRYALDCITN  241 (371)
T ss_dssp             HHHHTTTCCCEEEESSCS
T ss_pred             HHHHccCCccEEEECCCc
Confidence            3332 2469999999995

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.33  E-value=0.0083  Score=58.03  Aligned_cols=79  Identities=20%  Similarity=0.323  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++           .+.+++.|....   .|.++ .+++.+.+.
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~~v---i~~~~~~~~~~~~v~  259 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEK-----------FPKAKALGATDC---LNPRELDKPVQDVIT  259 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-----------HHHHHHTTCSEE---ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHhCCcEE---EccccccchHHHHHH
Confidence            5889999996 8999999998888999 79999887764           233445565322   24432 122333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +++|++|.++|.
T Consensus       260 ~~~~--~g~Dvvid~~G~  275 (376)
T 1e3i_A          260 ELTA--GGVDYSLDCAGT  275 (376)
T ss_dssp             HHHT--SCBSEEEESSCC
T ss_pred             HHhC--CCccEEEECCCC
Confidence            3322  489999999985

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.29  E-value=0.0065  Score=58.68  Aligned_cols=79  Identities=19%  Similarity=0.320  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++           .+.+++.|....   .|.++ .+++.+.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~~~~~~~~v~  254 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK-----------FARAKEFGATEC---INPQDFSKPIQEVLI  254 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-----------HHHHHHHTCSEE---ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHcCCceE---eccccccccHHHHHH
Confidence            5889999996 8999999998888999 79999887764           223344554322   24332 122333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++..  +++|++|+++|.
T Consensus       255 ~~~~--~g~D~vid~~g~  270 (373)
T 2fzw_A          255 EMTD--GGVDYSFECIGN  270 (373)
T ss_dssp             HHTT--SCBSEEEECSCC
T ss_pred             HHhC--CCCCEEEECCCc
Confidence            3322  479999999985

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.24  E-value=0.0065  Score=58.83  Aligned_cols=79  Identities=23%  Similarity=0.302  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+++++++++           .+..++.|....   .|..+ .+++.+.+.
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~~v---i~~~~~~~~~~~~i~  257 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKK-----------YETAKKFGVNEF---VNPKDHDKPIQEVIV  257 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTH-----------HHHHHTTTCCEE---ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH-----------HHHHHHcCCcEE---EccccCchhHHHHHH
Confidence            5889999998 9999999998888999 89999988765           233445565432   23332 223333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++.  .+++|++|.++|.
T Consensus       258 ~~~--~gg~D~vid~~g~  273 (378)
T 3uko_A          258 DLT--DGGVDYSFECIGN  273 (378)
T ss_dssp             HHT--TSCBSEEEECSCC
T ss_pred             Hhc--CCCCCEEEECCCC
Confidence            332  2489999999995

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.24  E-value=0.01  Score=57.55  Aligned_cols=78  Identities=23%  Similarity=0.350  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCC--ChHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIR--DEHAVQSAV   84 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~--~~~~v~~~~   84 (406)
                      .|++++|+| ++++|...++.+...| ++|+++++++++           .+.+++.|....   .|..  +.+++   .
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~~~~~~---~  256 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNR-----------LKLAEEIGADLT---LNRRETSVEER---R  256 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHH-----------HHHHHHTTCSEE---EETTTSCHHHH---H
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHH-----------HHHHHHcCCcEE---EeccccCcchH---H
Confidence            589999999 8999999999888899 599999987653           233445564322   2433  13333   3


Q ss_pred             HHHHHhc-C-CccEEEecccc
Q psy6113          85 NAAVDKF-G-GIDILVNNASA  103 (406)
Q Consensus        85 ~~i~~~~-g-~iD~linnAG~  103 (406)
                      +++.+.. + ++|++|+++|.
T Consensus       257 ~~v~~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          257 KAIMDITHGRGADFILEATGD  277 (380)
T ss_dssp             HHHHHHTTTSCEEEEEECSSC
T ss_pred             HHHHHHhCCCCCcEEEECCCC
Confidence            3343333 2 69999999984

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.18  E-value=0.0081  Score=57.67  Aligned_cols=76  Identities=14%  Similarity=0.272  Sum_probs=51.9

Q ss_pred             cCCcEEEEecCCchHHHHH-HHHH-HHcCCe-EEEEecCCC---CCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           7 LSGLTIFITGASRGIGKAI-ALKA-AKDGAN-IVIAAKTAE---PHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         7 l~gk~alVTGas~GIG~ai-a~~L-a~~Ga~-Vvl~~r~~~---~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      +.+++++|+|+ |++|... ++.+ ...|++ |+.++++.+   +           .+.+++.|...  +  |..+.+ +
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~-----------~~~~~~lGa~~--v--~~~~~~-~  233 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPT-----------IDIIEELDATY--V--DSRQTP-V  233 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHH-----------HHHHHHTTCEE--E--ETTTSC-G
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHH-----------HHHHHHcCCcc--c--CCCccC-H
Confidence            34599999999 9999999 7766 577997 999998876   4           23344556432  2  444332 2


Q ss_pred             HHHHHHHHHhcCCccEEEecccc
Q psy6113          81 QSAVNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        81 ~~~~~~i~~~~g~iD~linnAG~  103 (406)
                      .+ +.++   .+++|++|.++|.
T Consensus       234 ~~-i~~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          234 ED-VPDV---YEQMDFIYEATGF  252 (357)
T ss_dssp             GG-HHHH---SCCEEEEEECSCC
T ss_pred             HH-HHHh---CCCCCEEEECCCC
Confidence            23 3333   3489999999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.14  E-value=0.013  Score=55.83  Aligned_cols=77  Identities=14%  Similarity=0.198  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKD--GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      .|++++|+|+ +++|...++.+...  |++|+.+++++++           .+.+++.|....   .|..+.   ...++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~---~~~~~  231 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKH-----------RDFALELGADYV---SEMKDA---ESLIN  231 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHH-----------HHHHHHHTCSEE---ECHHHH---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHH-----------HHHHHHhCCCEE---eccccc---hHHHH
Confidence            7899999999 89999999988888  9999999887653           233344554322   232220   12333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++.+ ..++|++|+++|.
T Consensus       232 ~~~~-g~g~D~vid~~g~  248 (344)
T 2h6e_A          232 KLTD-GLGASIAIDLVGT  248 (344)
T ss_dssp             HHHT-TCCEEEEEESSCC
T ss_pred             Hhhc-CCCccEEEECCCC
Confidence            3332 2379999999984

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.13  E-value=0.0068  Score=57.86  Aligned_cols=77  Identities=22%  Similarity=0.319  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +|+|...++.+...|+ +|+.+++++++.+.           +++. ..   ...|..+.+ +.+.+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~-----------~~~l-a~---~v~~~~~~~-~~~~~~~  226 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAF-----------ARPY-AD---RLVNPLEED-LLEVVRR  226 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGG-----------GTTT-CS---EEECTTTSC-HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-----------HHHh-HH---hccCcCccC-HHHHHHH
Confidence            7899999999 9999999998888999 99999987654221           1111 11   123554432 3333333


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +.  .+++|++|+++|.
T Consensus       227 ~~--~~g~D~vid~~g~  241 (343)
T 2dq4_A          227 VT--GSGVEVLLEFSGN  241 (343)
T ss_dssp             HH--SSCEEEEEECSCC
T ss_pred             hc--CCCCCEEEECCCC
Confidence            32  3479999999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.11  E-value=0.0054  Score=57.92  Aligned_cols=74  Identities=15%  Similarity=0.157  Sum_probs=50.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+ ++|+||++++|...++.+...|++|+.+++++++           .+.+++.|....+-.-|.   +.    ++++ 
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~vi~~~~~---~~----~~~~-  207 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGREST-----------HGYLKSLGANRILSRDEF---AE----SRPL-  207 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG-----------HHHHHHHTCSEEEEGGGS---SC----CCSS-
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHhcCCCEEEecCCH---HH----HHhh-
Confidence            46 9999999999999999999999999999988764           233444565433322222   11    1111 


Q ss_pred             HhcCCccEEEecccc
Q psy6113          89 DKFGGIDILVNNASA  103 (406)
Q Consensus        89 ~~~g~iD~linnAG~  103 (406)
                       ..+++|++|.++|.
T Consensus       208 -~~~~~d~v~d~~g~  221 (324)
T 3nx4_A          208 -EKQLWAGAIDTVGD  221 (324)
T ss_dssp             -CCCCEEEEEESSCH
T ss_pred             -cCCCccEEEECCCc
Confidence             12579999999884

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.09  E-value=0.015  Score=56.98  Aligned_cols=39  Identities=23%  Similarity=0.159  Sum_probs=35.1

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++|+.++
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~  207 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEV  207 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGG
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            467999999997 899999999999999999999998764

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.09  E-value=0.0098  Score=57.43  Aligned_cols=79  Identities=19%  Similarity=0.305  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++           .+.+++.|....   .|..+ .+++.+.+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~~v---i~~~~~~~~~~~~i~  255 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDK-----------FPKAIELGATEC---LNPKDYDKPIYEVIC  255 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-----------HHHHHHTTCSEE---ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH-----------HHHHHHcCCcEE---EecccccchHHHHHH
Confidence            5889999996 8999999988888899 79999887664           233445565322   23332 122333333


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      ++.  .+++|++|.++|.
T Consensus       256 ~~t--~gg~Dvvid~~g~  271 (373)
T 1p0f_A          256 EKT--NGGVDYAVECAGR  271 (373)
T ss_dssp             HHT--TSCBSEEEECSCC
T ss_pred             HHh--CCCCCEEEECCCC
Confidence            322  2489999999985

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.02  E-value=0.028  Score=51.34  Aligned_cols=74  Identities=18%  Similarity=0.193  Sum_probs=53.8

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +|. +.+..+++.+++.+..++...                                +.++.+
T Consensus        22 aiA~~la~~Ga~Vv~--~~~-~~~~~~~~~~~i~~~g~~~~~--------------------------------~~~Dvt   66 (254)
T 4fn4_A           22 AIAKKFALNDSIVVA--VEL-LEDRLNQIVQELRGMGKEVLG--------------------------------VKADVS   66 (254)
T ss_dssp             HHHHHHHHTTCEEEE--EES-CHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHcCCEEEE--EEC-CHHHHHHHHHHHHhcCCcEEE--------------------------------EEccCC
Confidence            356667777877654  454 577788888888654332211                                234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..++++.++.+.+.||+||+||||||+.
T Consensus        67 ~~~~v~~~~~~~~~~~G~iDiLVNNAGi~   95 (254)
T 4fn4_A           67 KKKDVEEFVRRTFETYSRIDVLCNNAGIM   95 (254)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            78889999999999999999999999964

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.02  E-value=0.0063  Score=58.82  Aligned_cols=77  Identities=26%  Similarity=0.393  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++           .+..++.|....   .|.++.+-    .+.
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~~v---i~~~~~~~----~~~  242 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATK-----------RRLAEEVGATAT---VDPSAGDV----VEA  242 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHH-----------HHHHHHHTCSEE---ECTTSSCH----HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHcCCCEE---ECCCCcCH----HHH
Confidence            5889999998 8999999998888999 78888777543           233445565432   34444332    223


Q ss_pred             HHH----hcCCccEEEecccc
Q psy6113          87 AVD----KFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~----~~g~iD~linnAG~  103 (406)
                      +.+    ..+++|++|.++|.
T Consensus       243 i~~~~~~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          243 IAGPVGLVPGGVDVVIECAGV  263 (370)
T ss_dssp             HHSTTSSSTTCEEEEEECSCC
T ss_pred             HHhhhhccCCCCCEEEECCCC
Confidence            332    12489999999984

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.02  E-value=0.0084  Score=58.16  Aligned_cols=80  Identities=18%  Similarity=0.259  Sum_probs=54.3

Q ss_pred             CCcEEEEec-CCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITG-ASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTG-as~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.| |++++|...++.+...|++|+.+++++++           .+.+++.|....   .|..+.+-.+++.+.
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~-----------~~~~~~lGa~~~---~~~~~~~~~~~v~~~  235 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQ-----------ADLLKAQGAVHV---CNAASPTFMQDLTEA  235 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHH-----------HHHHHHTTCSCE---EETTSTTHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----------HHHHHhCCCcEE---EeCCChHHHHHHHHH
Confidence            578899987 89999999999888899999999887653           334445565432   344443333322222


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      . . ..++|++|.++|.
T Consensus       236 t-~-~~g~d~v~d~~g~  250 (379)
T 3iup_A          236 L-V-STGATIAFDATGG  250 (379)
T ss_dssp             H-H-HHCCCEEEESCEE
T ss_pred             h-c-CCCceEEEECCCc
Confidence            2 1 1269999999995

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.92  E-value=0.048  Score=52.66  Aligned_cols=86  Identities=21%  Similarity=0.206  Sum_probs=56.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecC----------
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDI----------   74 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl----------   74 (406)
                      ..+.+++++|.|+ |.+|+..++.+...|++|++.+|+.++           .+.+.+.|.++.  ..|+          
T Consensus       180 ~~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~-----------l~~~~~lGa~~~--~l~~~~~~~~gya~  245 (381)
T 3p2y_A          180 GTVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEV-----------AEQVRSVGAQWL--DLGIDAAGEGGYAR  245 (381)
T ss_dssp             CEECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGG-----------HHHHHHTTCEEC--CCC-----------
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHH-----------HHHHHHcCCeEE--eccccccccccchh
Confidence            3457899999999 799999999999999999999998764           233444555432  2221          


Q ss_pred             -CChHHHHHHHHHHHHhcCCccEEEeccccc
Q psy6113          75 -RDEHAVQSAVNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        75 -~~~~~v~~~~~~i~~~~g~iD~linnAG~~  104 (406)
                       ...+....-.+.+.+.....|++|+++.+.
T Consensus       246 ~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          246 ELSEAERAQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             --CHHHHHHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             hhhHHHHhhhHHHHHHHHhcCCEEEECCCCC
Confidence             001112223334445556788888877543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.91  E-value=0.0086  Score=56.55  Aligned_cols=74  Identities=14%  Similarity=0.265  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++++|...++.+...|++|+.+++..+            .+.+++.|....   .|..+.+...      
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~------------~~~~~~lGa~~~---i~~~~~~~~~------  210 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN------------HAFLKALGAEQC---INYHEEDFLL------  210 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH------------HHHHHHHTCSEE---EETTTSCHHH------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch------------HHHHHHcCCCEE---EeCCCcchhh------
Confidence            5899999999999999999999999999998875321            233445565432   3444443221      


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       +...++|++|.++|.
T Consensus       211 -~~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          211 -AISTPVDAVIDLVGG  225 (321)
T ss_dssp             -HCCSCEEEEEESSCH
T ss_pred             -hhccCCCEEEECCCc
Confidence             222589999999984

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.90  E-value=0.015  Score=55.71  Aligned_cols=74  Identities=19%  Similarity=0.251  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|++|+++++++++           .+.+. +.|....   .|..+.+.+      
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~-----------~~~~~~~lGa~~v---i~~~~~~~~------  238 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKK-----------REEALQDLGADDY---VIGSDQAKM------  238 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTH-----------HHHHHTTSCCSCE---EETTCHHHH------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHH-----------HHHHHHHcCCcee---eccccHHHH------
Confidence            6899999995 999999999888899999999988764           22233 4554322   344444322      


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                       .+..+++|++|.++|.
T Consensus       239 -~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          239 -SELADSLDYVIDTVPV  254 (357)
T ss_dssp             -HHSTTTEEEEEECCCS
T ss_pred             -HHhcCCCCEEEECCCC
Confidence             2223579999999985

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=95.86  E-value=0.0033  Score=52.04  Aligned_cols=37  Identities=16%  Similarity=0.243  Sum_probs=33.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+++++|.|+ |++|+++++.|.+.|++|++.+|+.++
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~   56 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDH   56 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHH
Confidence            4889999997 999999999999999999999998654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.83  E-value=0.012  Score=57.57  Aligned_cols=77  Identities=21%  Similarity=0.372  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++           .+.+++.|....   .|..+.+-    .++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~~~----~~~  273 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVR-----------RNLAKELGADHV---IDPTKENF----VEA  273 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHH-----------HHHHHHHTCSEE---ECTTTSCH----HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-----------HHHHHHcCCCEE---EcCCCCCH----HHH
Confidence            5899999998 8999999998888999 89988887653           233445565432   24444332    233


Q ss_pred             HHHhc-C-CccEEEecccc
Q psy6113          87 AVDKF-G-GIDILVNNASA  103 (406)
Q Consensus        87 i~~~~-g-~iD~linnAG~  103 (406)
                      +.+.. + ++|++|.++|.
T Consensus       274 i~~~t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          274 VLDYTNGLGAKLFLEATGV  292 (404)
T ss_dssp             HHHHTTTCCCSEEEECSSC
T ss_pred             HHHHhCCCCCCEEEECCCC
Confidence            33333 2 69999999995

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.75  E-value=0.048  Score=51.83  Aligned_cols=38  Identities=13%  Similarity=0.218  Sum_probs=33.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .++++++++|.|+ ||+|.++++.|+..|. ++.+++++.
T Consensus        30 ~kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           30 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            3578899999998 8999999999999997 788988765

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=95.74  E-value=0.017  Score=56.56  Aligned_cols=39  Identities=28%  Similarity=0.492  Sum_probs=35.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~r  203 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYER  203 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence            478999999998 9999999999999998 89999998653

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.72  E-value=0.017  Score=54.32  Aligned_cols=68  Identities=7%  Similarity=0.082  Sum_probs=47.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+|+ |++|...++.+...|++|+.++ +.++           .+.+++.|....+   |  |.+   +    +
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~-----------~~~~~~lGa~~v~---~--d~~---~----v  196 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLS-----------QALAAKRGVRHLY---R--EPS---Q----V  196 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCC-----------HHHHHHHTEEEEE---S--SGG---G----C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-Chhh-----------HHHHHHcCCCEEE---c--CHH---H----h
Confidence            5899999999 9999999998888999999998 6554           2333445654332   2  211   1    1


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                         .+++|++|.++|.
T Consensus       197 ---~~g~Dvv~d~~g~  209 (315)
T 3goh_A          197 ---TQKYFAIFDAVNS  209 (315)
T ss_dssp             ---CSCEEEEECC---
T ss_pred             ---CCCccEEEECCCc
Confidence               4589999999985

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=95.64  E-value=0.036  Score=50.67  Aligned_cols=75  Identities=21%  Similarity=0.181  Sum_probs=54.3

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +|. +.+..++..+++.+..++.  .                              .+.++.+
T Consensus        24 aia~~la~~Ga~Vvi--~~~-~~~~~~~~~~~l~~~g~~~--~------------------------------~~~~Dv~   68 (255)
T 4g81_D           24 AYAEGLAAAGARVIL--NDI-RATLLAESVDTLTRKGYDA--H------------------------------GVAFDVT   68 (255)
T ss_dssp             HHHHHHHHTTCEEEE--CCS-CHHHHHHHHHHHHHTTCCE--E------------------------------ECCCCTT
T ss_pred             HHHHHHHHCCCEEEE--EEC-CHHHHHHHHHHHHhcCCcE--E------------------------------EEEeeCC
Confidence            356677778877644  454 5677888888876653321  1                              1123566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++.++.+.+.||+||+||||||...
T Consensus        69 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~   98 (255)
T 4g81_D           69 DELAIEAAFSKLDAEGIHVDILINNAGIQY   98 (255)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHCCCCcEEEECCCCCC
Confidence            778899999999999999999999999753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=95.61  E-value=0.051  Score=49.48  Aligned_cols=50  Identities=10%  Similarity=0.049  Sum_probs=39.3

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHH
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN  180 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~  180 (406)
                      ++.++..++++.++.+.+.||++|+||||||.....++.....+...+.+
T Consensus        65 ~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~  114 (256)
T 4fs3_A           65 IDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGF  114 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHH
Confidence            45667788999999999999999999999998877766655555444433

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.57  E-value=0.026  Score=56.05  Aligned_cols=139  Identities=14%  Similarity=0.157  Sum_probs=80.5

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHH
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      |.+++++++|.++|.|. ++.|.+.|+.|.++|++|.+.+++.....       ...+.+++.|.++..- -+   ++  
T Consensus         1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~-------~~~~~L~~~gi~~~~g-~~---~~--   66 (451)
T 3lk7_A            1 MKTITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDEN-------PTAQSLLEEGIKVVCG-SH---PL--   66 (451)
T ss_dssp             ---CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGC-------HHHHHHHHTTCEEEES-CC---CG--
T ss_pred             CcchhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCC-------hHHHHHHhCCCEEEEC-CC---hH--
Confidence            66778899999999999 78999999999999999999998763211       2345566666544321 11   11  


Q ss_pred             HHHHHHHHHhcCC-ccEEEecccccccCCCCC------CCh-hhhhhhhhhccccceEEeccchhhH-HHHHHHHHhhcC
Q psy6113          81 QSAVNAAVDKFGG-IDILVNNASAISLTDTAN------TPL-KKYDLMNQINARGTYLVKASQGLEI-QSAVNAAVDKFG  151 (406)
Q Consensus        81 ~~~~~~i~~~~g~-iD~linnAG~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g  151 (406)
                              +.+.. .|.+|.+.|+....+...      .+. .+.+...+..-...+-++-+.+.+. ...+.++++..|
T Consensus        67 --------~~~~~~~d~vv~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g  138 (451)
T 3lk7_A           67 --------ELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG  138 (451)
T ss_dssp             --------GGGGSCEEEEEECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred             --------HhhcCCCCEEEECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence                    01123 899999999854322110      000 0000111111112345566666664 677778888777


Q ss_pred             CcceEecccc
Q psy6113         152 GIDILVNNAS  161 (406)
Q Consensus       152 ~id~li~~ag  161 (406)
                      .--.+.-|-|
T Consensus       139 ~~~~~~Gnig  148 (451)
T 3lk7_A          139 QRGLLAGNIG  148 (451)
T ss_dssp             CCEEEEETSS
T ss_pred             CCEEEeeecC
Confidence            5334455544

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.56  E-value=0.051  Score=51.26  Aligned_cols=40  Identities=18%  Similarity=0.208  Sum_probs=34.2

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      |.|.++.+.+.|+|+ |.+|.++|..|+..|. +|++.++++
T Consensus         2 ~~m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~   42 (315)
T 3tl2_A            2 NAMTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQ   42 (315)
T ss_dssp             --CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred             CCcccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccc
Confidence            556677788999997 9999999999999999 999999983

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.52  E-value=0.035  Score=53.92  Aligned_cols=40  Identities=18%  Similarity=0.230  Sum_probs=36.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ..+.+++++|+|+ |++|+++++.+...|++|++.+|+.++
T Consensus       168 ~~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~  207 (384)
T 1l7d_A          168 GTVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAAT  207 (384)
T ss_dssp             EEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            3678999999997 899999999999999999999998765

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.51  E-value=0.017  Score=55.44  Aligned_cols=84  Identities=11%  Similarity=0.156  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++++|...++.+...|++|+.+.++.+..       .+..+.+++.|....+   |..+. .... +.++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~-------~~~~~~~~~lGa~~vi---~~~~~-~~~~-~~~~  234 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDI-------QKLSDRLKSLGAEHVI---TEEEL-RRPE-MKNF  234 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCH-------HHHHHHHHHTTCSEEE---EHHHH-HSGG-GGGT
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccch-------HHHHHHHHhcCCcEEE---ecCcc-hHHH-HHHH
Confidence            589999999999999999988888899988877654421       1123344556654322   21110 0011 1111


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      ....+++|++|.++|.
T Consensus       235 ~~~~~~~Dvvid~~g~  250 (357)
T 1zsy_A          235 FKDMPQPRLALNCVGG  250 (357)
T ss_dssp             TSSSCCCSEEEESSCH
T ss_pred             HhCCCCceEEEECCCc
Confidence            1112359999999984

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.51  E-value=0.047  Score=53.15  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=35.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+.+.+++|.|+ |.+|+..++.+...|++|++.+++..+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~  225 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAA  225 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            467889999999 799999999999999999999998864

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.45  E-value=0.03  Score=49.61  Aligned_cols=73  Identities=16%  Similarity=0.122  Sum_probs=54.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .++|.|+ |.+|..+++.|.++|++|+++++++++           .+.+.... ...++..|.++++.++++      .
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~-----------~~~l~~~~-~~~~i~gd~~~~~~l~~a------~   62 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDREL-----------CEEFAKKL-KATIIHGDGSHKEILRDA------E   62 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHH-----------HHHHHHHS-SSEEEESCTTSHHHHHHH------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-----------HHHHHHHc-CCeEEEcCCCCHHHHHhc------C
Confidence            3789997 889999999999999999999998653           23332221 245688999998776543      2


Q ss_pred             cCCccEEEeccc
Q psy6113          91 FGGIDILVNNAS  102 (406)
Q Consensus        91 ~g~iD~linnAG  102 (406)
                      ....|++|.+.+
T Consensus        63 i~~ad~vi~~~~   74 (218)
T 3l4b_C           63 VSKNDVVVILTP   74 (218)
T ss_dssp             CCTTCEEEECCS
T ss_pred             cccCCEEEEecC
Confidence            346788887765

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.41  E-value=0.026  Score=54.93  Aligned_cols=78  Identities=18%  Similarity=0.249  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+++++++++           .+.+++.|..  .  +|.++.+.+.   ++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~--~--i~~~~~~~~~---~~  245 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPAR-----------LAHAKAQGFE--I--ADLSLDTPLH---EQ  245 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH-----------HHHHHHTTCE--E--EETTSSSCHH---HH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHH-----------HHHHHHcCCc--E--EccCCcchHH---HH
Confidence            5889999995 9999999988888999 68888887653           3344556653  2  3544433222   22


Q ss_pred             HHHhc--CCccEEEeccccc
Q psy6113          87 AVDKF--GGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~~  104 (406)
                      +.+..  .++|++|.++|..
T Consensus       246 v~~~t~g~g~Dvvid~~G~~  265 (398)
T 1kol_A          246 IAALLGEPEVDCAVDAVGFE  265 (398)
T ss_dssp             HHHHHSSSCEEEEEECCCTT
T ss_pred             HHHHhCCCCCCEEEECCCCc
Confidence            32222  3699999999853

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.39  E-value=0.021  Score=55.03  Aligned_cols=77  Identities=17%  Similarity=0.274  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++           .+.+++.|....   .|..+.+-.    ++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~~v---i~~~~~~~~----~~  250 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR-----------LELAKQLGATHV---INSKTQDPV----AA  250 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH-----------HHHHHHHTCSEE---EETTTSCHH----HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH-----------HHHHHHcCCCEE---ecCCccCHH----HH
Confidence            5889999995 8999999988888899 68888887653           233344554322   244433222    22


Q ss_pred             HHHhc-CCccEEEecccc
Q psy6113          87 AVDKF-GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~-g~iD~linnAG~  103 (406)
                      +.+.. +++|++|+++|.
T Consensus       251 ~~~~~~gg~D~vid~~g~  268 (371)
T 1f8f_A          251 IKEITDGGVNFALESTGS  268 (371)
T ss_dssp             HHHHTTSCEEEEEECSCC
T ss_pred             HHHhcCCCCcEEEECCCC
Confidence            32222 379999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.38  E-value=0.056  Score=51.21  Aligned_cols=44  Identities=16%  Similarity=0.232  Sum_probs=33.3

Q ss_pred             CCCCcccCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           1 MINTGKLSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         1 ~~~~~~l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      |.+..+..++.+.|+|+ |++|.+++..|+..|.  .|++.+++.++
T Consensus         1 ~~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k   46 (326)
T 3vku_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDK   46 (326)
T ss_dssp             ------CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHH
T ss_pred             CcccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHH
Confidence            44555667888999997 9999999999999987  89999987553

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.38  E-value=0.018  Score=55.14  Aligned_cols=77  Identities=18%  Similarity=0.256  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++           .+..++.|....   .|..+.+    +.++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~-----------~~~~~~lGa~~v---i~~~~~~----~~~~  226 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHC-----------CDIALEYGATDI---INYKNGD----IVEQ  226 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHH-----------HHHHHHHTCCEE---ECGGGSC----HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHH-----------HHHHHHhCCceE---EcCCCcC----HHHH
Confidence            5889999986 8999999988888999 79999887543           233455565432   2333332    2333


Q ss_pred             HHHhc-C-CccEEEecccc
Q psy6113          87 AVDKF-G-GIDILVNNASA  103 (406)
Q Consensus        87 i~~~~-g-~iD~linnAG~  103 (406)
                      +.+.. + ++|++|.++|.
T Consensus       227 v~~~t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          227 ILKATDGKGVDKVVIAGGD  245 (352)
T ss_dssp             HHHHTTTCCEEEEEECSSC
T ss_pred             HHHHcCCCCCCEEEECCCC
Confidence            33333 2 69999999985

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.29  E-value=0.042  Score=50.81  Aligned_cols=39  Identities=26%  Similarity=0.347  Sum_probs=35.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .+++||.++|.|+++-+|+.+|..|+.+|++|.++.|+.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999998899999999999999999987653

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.25  E-value=0.11  Score=47.24  Aligned_cols=89  Identities=19%  Similarity=0.258  Sum_probs=54.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCC------------cccHHHHHHHHHHcCC--eeee
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL------------PGTIYSAAKEVEDAGG--NCLP   69 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~------------~~~i~~~~~~~~~~g~--~~~~   69 (406)
                      .+|++++++|.|+ ||+|.++++.|+..|. ++.+++++.-....+            ..+.+.+.+.+.+.+.  ++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            3578899999998 7899999999999997 788887764211110            1234445555655443  3444


Q ss_pred             eeecCCChHHHHHHHHHHHHhcCCccEEEeccc
Q psy6113          70 CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        70 ~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG  102 (406)
                      +..+++. +...++++       ..|++|++..
T Consensus       103 ~~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            4444432 33333322       3688877644

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.24  E-value=0.033  Score=53.02  Aligned_cols=76  Identities=14%  Similarity=0.167  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+... |++|+.+++++++           .+.+++.|....+   |-.+ +    +.++
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~-----------~~~~~~lGa~~~i---~~~~-~----~~~~  230 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDR-----------LALAREVGADAAV---KSGA-G----AADA  230 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHH-----------HHHHHHTTCSEEE---ECST-T----HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH-----------HHHHHHcCCCEEE---cCCC-c----HHHH
Confidence            5899999998 99999988877777 6899999887653           3344556654332   2222 2    2233


Q ss_pred             HHHhc--CCccEEEecccc
Q psy6113          87 AVDKF--GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~  103 (406)
                      +.+..  .++|++|.++|.
T Consensus       231 v~~~t~g~g~d~v~d~~G~  249 (345)
T 3jv7_A          231 IRELTGGQGATAVFDFVGA  249 (345)
T ss_dssp             HHHHHGGGCEEEEEESSCC
T ss_pred             HHHHhCCCCCeEEEECCCC
Confidence            33322  279999999995

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.19  E-value=0.061  Score=54.93  Aligned_cols=96  Identities=13%  Similarity=0.075  Sum_probs=58.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCC------------cccHHHHHHHHHHcCC--eeeee
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKL------------PGTIYSAAKEVEDAGG--NCLPC   70 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~------------~~~i~~~~~~~~~~g~--~~~~~   70 (406)
                      +++++.|+|.|+ ||+|.++++.|+..|. ++.++|++.-....+            ..+.+.+++.+.+...  ++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            578899999998 7999999999999997 899998765221111            1234455666666554  34444


Q ss_pred             eecC-------CChHHHHHHHHHHHHhcCCccEEEeccc
Q psy6113          71 IVDI-------RDEHAVQSAVNAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        71 ~~Dl-------~~~~~v~~~~~~i~~~~g~iD~linnAG  102 (406)
                      ..++       ++++....-.+.+.+.+...|++|++..
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            4333       2221111111223333345788887755

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.17  E-value=0.035  Score=54.06  Aligned_cols=80  Identities=23%  Similarity=0.370  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+ +++|...++.+...|+ +|+.++++.++           .+.+++.|..  .  +|..+.+...+.+.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~--~--i~~~~~~~~~~~~~~  248 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPER-----------LKLLSDAGFE--T--IDLRNSAPLRDQIDQ  248 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHH-----------HHHHHTTTCE--E--EETTSSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHH-----------HHHHHHcCCc--E--EcCCCcchHHHHHHH
Confidence            5889999997 9999999988888899 89999987653           2334555653  2  355443221111222


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                      +.. ..++|++|.++|..
T Consensus       249 ~~~-g~g~Dvvid~~g~~  265 (398)
T 2dph_A          249 ILG-KPEVDCGVDAVGFE  265 (398)
T ss_dssp             HHS-SSCEEEEEECSCTT
T ss_pred             HhC-CCCCCEEEECCCCc
Confidence            211 12699999999853

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.12  E-value=0.055  Score=51.68  Aligned_cols=39  Identities=28%  Similarity=0.234  Sum_probs=33.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      +.++.+.|+|++|.+|..+|..++..|.  +|+++|++.++
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k   46 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVG   46 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            3467899999999999999999999994  79999987643

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=95.07  E-value=0.064  Score=50.55  Aligned_cols=33  Identities=21%  Similarity=0.385  Sum_probs=30.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC--CeEEEEecCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDG--ANIVIAAKTA   43 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~   43 (406)
                      .+.|+||+|.+|..++..|++.|  ..|++.++++
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            47899999999999999999998  6899999976

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=94.64  E-value=0.12  Score=49.12  Aligned_cols=34  Identities=18%  Similarity=0.361  Sum_probs=29.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--e-----EEEEecCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA--N-----IVIAAKTA   43 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga--~-----Vvl~~r~~   43 (406)
                      ..+.||||+|.||..++..|+..|.  .     |++.+++.
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~   44 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC
Confidence            4689999999999999999999885  5     88988864

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=94.61  E-value=0.036  Score=51.41  Aligned_cols=39  Identities=15%  Similarity=0.273  Sum_probs=35.2

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++++|.++|.|+ ||.|++++..|++.|+ +|+++.|+.++
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~k  158 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEK  158 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHH
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            578999999998 6999999999999998 89999998754

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=94.56  E-value=0.31  Score=46.08  Aligned_cols=37  Identities=19%  Similarity=0.268  Sum_probs=31.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      ..+.+.|+|+ |.+|.+++..|+..|.  .|++.+++.++
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k   42 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEK   42 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHH
Confidence            3567889996 9999999999999996  89999987553

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=94.56  E-value=0.035  Score=49.71  Aligned_cols=72  Identities=11%  Similarity=0.042  Sum_probs=53.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .+.++|.|+ +.+|+.+++.|.++|+ |++++++++.           .+.+. .  .+.++..|.++++.++++     
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~-----------~~~~~-~--~~~~i~gd~~~~~~l~~a-----   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR-----------KKVLR-S--GANFVHGDPTRVSDLEKA-----   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGH-----------HHHHH-T--TCEEEESCTTCHHHHHHT-----
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHH-----------HHHHh-c--CCeEEEcCCCCHHHHHhc-----
Confidence            356788887 7999999999999999 9999988653           23333 2  367788999998765543     


Q ss_pred             HhcCCccEEEeccc
Q psy6113          89 DKFGGIDILVNNAS  102 (406)
Q Consensus        89 ~~~g~iD~linnAG  102 (406)
                       .....|.+|.+.+
T Consensus        68 -~i~~ad~vi~~~~   80 (234)
T 2aef_A           68 -NVRGARAVIVDLE   80 (234)
T ss_dssp             -TCTTCSEEEECCS
T ss_pred             -CcchhcEEEEcCC
Confidence             2346788887765

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=94.49  E-value=0.096  Score=48.31  Aligned_cols=34  Identities=21%  Similarity=0.203  Sum_probs=30.0

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      .++.++..+.++.++.+.+.||+||+||||||..
T Consensus        81 ~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~  114 (273)
T 4fgs_A           81 QADSANLAELDRLYEKVKAEAGRIDVLFVNAGGG  114 (273)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             EecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            3466778889999999999999999999999964

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=94.41  E-value=0.17  Score=51.64  Aligned_cols=69  Identities=12%  Similarity=0.069  Sum_probs=47.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCC------------CcccHHHHHHHHHHcCC--eeee
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPK------------LPGTIYSAAKEVEDAGG--NCLP   69 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~------------~~~~i~~~~~~~~~~g~--~~~~   69 (406)
                      .+++++.|+|.|+ ||+|.++++.|+..|. ++.++|.+.-....            ...+.+.+++.+.+...  ++..
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~  401 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  401 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence            3677899999998 7999999999999998 79999765321111            12345566677776544  4444


Q ss_pred             eeecC
Q psy6113          70 CIVDI   74 (406)
Q Consensus        70 ~~~Dl   74 (406)
                      +..++
T Consensus       402 ~~~~I  406 (598)
T 3vh1_A          402 VKLSI  406 (598)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            54443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.40  E-value=0.15  Score=49.23  Aligned_cols=66  Identities=23%  Similarity=0.171  Sum_probs=48.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +.+.+|+++|.|+ +.+|+.+++.+.+.|++|++++.++.....             ...  -.++..|..|.+.+.+++
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-------------~~a--d~~~~~~~~d~~~l~~~~   71 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-------------YVA--HEFIQAKYDDEKALNQLG   71 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-------------GGS--SEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-------------hhC--CEEEECCCCCHHHHHHHH
Confidence            4467999999997 679999999999999999999876543110             011  124557888988887776


Q ss_pred             HH
Q psy6113          85 NA   86 (406)
Q Consensus        85 ~~   86 (406)
                      ++
T Consensus        72 ~~   73 (377)
T 3orq_A           72 QK   73 (377)
T ss_dssp             HH
T ss_pred             Hh
Confidence            53

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=94.40  E-value=0.39  Score=43.71  Aligned_cols=33  Identities=33%  Similarity=0.461  Sum_probs=29.2

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.++..+.++.+..+.+.||+||+||||||+.
T Consensus        62 ~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~   94 (258)
T 4gkb_A           62 VELQDDAQCRDAVAQTIATFGRLDGLVNNAGVN   94 (258)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             eecCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            456678889999999999999999999999964

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=94.39  E-value=0.13  Score=48.42  Aligned_cols=38  Identities=24%  Similarity=0.344  Sum_probs=35.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      ++.||+++|.|++.=+|+.+|+.|+..|++|.+++|+.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~  211 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN  211 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence            78999999999987789999999999999999998873

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.31  E-value=0.1  Score=48.13  Aligned_cols=38  Identities=21%  Similarity=0.247  Sum_probs=34.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      .+++||.++|.|+++=.|+.+|+.|..+|++|.++.|+
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            36899999999998889999999999999999988664

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.23  E-value=0.037  Score=51.61  Aligned_cols=92  Identities=13%  Similarity=0.129  Sum_probs=55.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +++.|.|. |-+|..+|+.|++.|++|++.+|++++.+++.+.=........+.-. ..++..=+.++..++++++.+..
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            35666664 78999999999999999999999988654210000000001111111 33444455667778888877776


Q ss_pred             hcCCccEEEecccc
Q psy6113          90 KFGGIDILVNNASA  103 (406)
Q Consensus        90 ~~g~iD~linnAG~  103 (406)
                      ...+=.++|+...+
T Consensus        94 ~l~~g~ivv~~st~  107 (296)
T 3qha_A           94 HAKPGTVIAIHSTI  107 (296)
T ss_dssp             TCCTTCEEEECSCC
T ss_pred             hcCCCCEEEEeCCC
Confidence            55444566666543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=94.07  E-value=0.12  Score=49.02  Aligned_cols=80  Identities=15%  Similarity=0.088  Sum_probs=52.6

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeE-EEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANI-VIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~V-vl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ..|++++|+|+ +|+|...++.+...|+++ +++++++++           .+..++.|....+   |.++.+. .+.++
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k-----------~~~a~~lGa~~~i---~~~~~~~-~~~~~  222 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEK-----------LALAKSFGAMQTF---NSSEMSA-PQMQS  222 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH-----------HHHHHHTTCSEEE---ETTTSCH-HHHHH
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHH-----------HHHHHHcCCeEEE---eCCCCCH-HHHHH
Confidence            36899999987 899999999999999865 566666543           3445566755433   3333322 22233


Q ss_pred             HHHHhcCCccEEEecccc
Q psy6113          86 AAVDKFGGIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~  103 (406)
                      .+ ...+..|+++.++|.
T Consensus       223 ~~-~~~~g~d~v~d~~G~  239 (346)
T 4a2c_A          223 VL-RELRFNQLILETAGV  239 (346)
T ss_dssp             HH-GGGCSSEEEEECSCS
T ss_pred             hh-cccCCcccccccccc
Confidence            32 334678999999884

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=94.00  E-value=0.2  Score=45.47  Aligned_cols=35  Identities=34%  Similarity=0.384  Sum_probs=30.4

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .++.++..+.++.++.+.+.||+||+||||||...
T Consensus        53 ~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~   87 (247)
T 3ged_A           53 HGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGS   87 (247)
T ss_dssp             ECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             EecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            34567788899999999999999999999999753

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=93.93  E-value=0.11  Score=47.95  Aligned_cols=38  Identities=24%  Similarity=0.478  Sum_probs=34.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      .+++||.++|.|.|+=.|+.+|..|+.+|++|.++.+.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            36899999999998889999999999999999998664

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=93.85  E-value=0.54  Score=44.36  Aligned_cols=39  Identities=18%  Similarity=0.211  Sum_probs=33.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      .++.+.+.|+|+ |.+|.+++..|+..|. +|++.++++++
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~   43 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGT   43 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchh
Confidence            456677899998 9999999999999998 99999998865

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=93.79  E-value=0.49  Score=44.80  Aligned_cols=39  Identities=13%  Similarity=0.241  Sum_probs=32.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      +...+.+.|+|+ |.+|.+++..|+.+|.  .|++.+++.++
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~   56 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDK   56 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHH
Confidence            456678899998 8999999999999996  89999987543

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=93.62  E-value=0.088  Score=50.18  Aligned_cols=40  Identities=23%  Similarity=0.248  Sum_probs=36.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .++.||++.|.|. |.||+++|++|...|++|++.+|+.++
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~  206 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLS  206 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCT
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCccc
Confidence            4789999999998 889999999999999999999998765

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=93.58  E-value=0.18  Score=46.94  Aligned_cols=39  Identities=13%  Similarity=0.179  Sum_probs=35.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .++.||.++|.|++.-+|+.+|+.|+.+|++|.++.++.
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  199 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT  199 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence            368999999999998899999999999999999986543

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=93.55  E-value=0.078  Score=49.50  Aligned_cols=94  Identities=21%  Similarity=0.201  Sum_probs=47.5

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH-H
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV-N   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~-~   85 (406)
                      |+.|+.+| | -|-+|..+|+.|+++|++|++.+|++++.+++.+.=...+....+.-.....+.+=+.+...++..+ .
T Consensus         4 Ms~kIgfI-G-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~   81 (297)
T 4gbj_A            4 MSEKIAFL-G-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSM   81 (297)
T ss_dssp             CCCEEEEE-C-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCH
T ss_pred             CCCcEEEE-e-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHH
Confidence            34565555 4 4789999999999999999999999988765422100001111111112233344456666666543 3


Q ss_pred             HHHHhcCCccEEEeccc
Q psy6113          86 AAVDKFGGIDILVNNAS  102 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG  102 (406)
                      .+.....+-+++|...-
T Consensus        82 ~~~~~~~~~~iiid~sT   98 (297)
T 4gbj_A           82 ELVEKLGKDGVHVSMST   98 (297)
T ss_dssp             HHHHHHCTTCEEEECSC
T ss_pred             HHHhhcCCCeEEEECCC
Confidence            34444444455555443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=93.49  E-value=0.16  Score=49.71  Aligned_cols=73  Identities=15%  Similarity=0.234  Sum_probs=49.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ..++|.|. |-+|+.+++.|.++|+.|++++++++.           .+.+...|  +.++..|.++++.++++      
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~-----------v~~~~~~g--~~vi~GDat~~~~L~~a------   64 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDH-----------IETLRKFG--MKVFYGDATRMDLLESA------   64 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHH-----------HHHHHHTT--CCCEESCTTCHHHHHHT------
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH-----------HHHHHhCC--CeEEEcCCCCHHHHHhc------
Confidence            45888897 669999999999999999999998753           33344433  34566677777655443      


Q ss_pred             hcCCccEEEeccc
Q psy6113          90 KFGGIDILVNNAS  102 (406)
Q Consensus        90 ~~g~iD~linnAG  102 (406)
                      ...+.|++|.+.+
T Consensus        65 gi~~A~~viv~~~   77 (413)
T 3l9w_A           65 GAAKAEVLINAID   77 (413)
T ss_dssp             TTTTCSEEEECCS
T ss_pred             CCCccCEEEECCC
Confidence            1234566665544

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.49  E-value=0.027  Score=51.45  Aligned_cols=39  Identities=21%  Similarity=0.391  Sum_probs=34.2

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPH   46 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~   46 (406)
                      .++| +++|.|+ ||.|++++..|++.|+ +|++.+|+.++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka  145 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERA  145 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHH
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            4577 8999997 8999999999999998 899999987653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=93.39  E-value=0.19  Score=48.18  Aligned_cols=39  Identities=26%  Similarity=0.471  Sum_probs=34.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~   44 (406)
                      .+|+++.|+|.|+ ||+|.++++.|+..|. ++.+++++.-
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~V  153 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQI  153 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence            3577899999998 8999999999999997 8999988754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=93.37  E-value=0.51  Score=43.56  Aligned_cols=34  Identities=18%  Similarity=0.318  Sum_probs=29.0

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ++.++..++++.++.+.+.||++|+||||||...
T Consensus        88 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~  121 (293)
T 3grk_A           88 CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSD  121 (293)
T ss_dssp             CCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            3456677889999999999999999999999664

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=93.21  E-value=0.19  Score=46.73  Aligned_cols=36  Identities=22%  Similarity=0.154  Sum_probs=32.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .+++.|.||.|.+|.++++.|++.|++|++.+|+.+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            356888998999999999999999999999998764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=93.16  E-value=0.091  Score=45.98  Aligned_cols=35  Identities=29%  Similarity=0.541  Sum_probs=31.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ++.|+||+|.+|.++++.|+++|++|++.+|+.++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~   36 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            47889999999999999999999999999997653

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=93.12  E-value=0.12  Score=49.03  Aligned_cols=78  Identities=21%  Similarity=0.229  Sum_probs=49.8

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      -.|++++|+|+ +|+|...+..+... |++|+.+++++++           .+...+.|....+   |-++.+..++   
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r-----------~~~~~~~Ga~~~i---~~~~~~~~~~---  223 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDK-----------LNLAKKIGADVTI---NSGDVNPVDE---  223 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHH-----------HHHHHHTTCSEEE---EC-CCCHHHH---
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHH-----------hhhhhhcCCeEEE---eCCCCCHHHH---
Confidence            35889999987 67777777777665 6899999988653           2334455654433   4444443333   


Q ss_pred             HHHHhcC--CccEEEecccc
Q psy6113          86 AAVDKFG--GIDILVNNASA  103 (406)
Q Consensus        86 ~i~~~~g--~iD~linnAG~  103 (406)
                       +.+..+  .+|.++.++|.
T Consensus       224 -v~~~t~g~g~d~~~~~~~~  242 (348)
T 4eez_A          224 -IKKITGGLGVQSAIVCAVA  242 (348)
T ss_dssp             -HHHHTTSSCEEEEEECCSC
T ss_pred             -hhhhcCCCCceEEEEeccC
Confidence             333332  58888888774

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=93.11  E-value=0.22  Score=48.06  Aligned_cols=38  Identities=34%  Similarity=0.452  Sum_probs=33.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      -+.||+++|.|++ .+|+.+++++.+.|++|++++.+..
T Consensus        11 ~~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~   48 (389)
T 3q2o_A           11 ILPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKN   48 (389)
T ss_dssp             CCTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCC
Confidence            3689999999985 4999999999999999999987654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=93.06  E-value=0.095  Score=49.39  Aligned_cols=42  Identities=17%  Similarity=0.159  Sum_probs=37.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      .++.||++.|.|. |.||+++|+.|...|++|+..+|+.+..+
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~  176 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWP  176 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCT
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhh
Confidence            4688999999998 78999999999999999999999876543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=93.04  E-value=0.52  Score=41.27  Aligned_cols=77  Identities=16%  Similarity=0.194  Sum_probs=49.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .++..+++.|.| .|.+|.++++.|++.|++|++.+|+++..+                ...+.++.  +. ...+++++
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~~~~----------------~aD~vi~a--v~-~~~~~~v~   74 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQATT----------------LGEIVIMA--VP-YPALAALA   74 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCCCSS----------------CCSEEEEC--SC-HHHHHHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHhc----------------cCCEEEEc--CC-cHHHHHHH
Confidence            356778899999 589999999999999999999999865211                22333332  33 66777788


Q ss_pred             HHHHHhcCCccEEEeccc
Q psy6113          85 NAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG  102 (406)
                      +++..... =.++|+.+.
T Consensus        75 ~~l~~~~~-~~~vi~~~~   91 (209)
T 2raf_A           75 KQYATQLK-GKIVVDITN   91 (209)
T ss_dssp             HHTHHHHT-TSEEEECCC
T ss_pred             HHHHHhcC-CCEEEEECC
Confidence            77765444 234555443

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=93.02  E-value=1.8  Score=40.64  Aligned_cols=37  Identities=22%  Similarity=0.216  Sum_probs=31.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      +.+.+.|+|+ |.+|.+++..|+..|. +|++.++++++
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~   41 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGM   41 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHH
Confidence            3456778885 9999999999999998 99999998765

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=92.88  E-value=0.25  Score=44.89  Aligned_cols=78  Identities=18%  Similarity=0.215  Sum_probs=52.4

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      ..+..+.+.|.++......-.+.+..+++.+++.+..+++.+                                +.++.+
T Consensus        26 aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~Dv~   73 (262)
T 3ksu_A           26 LTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL--------------------------------YQSDLS   73 (262)
T ss_dssp             HHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEE--------------------------------EECCCC
T ss_pred             HHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEE--------------------------------EECCCC
Confidence            345666666776655433344666777777776543212111                                233556


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++.+..+.+.||++|+||||||...
T Consensus        74 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~  103 (262)
T 3ksu_A           74 NEEEVAKLFDFAEKEFGKVDIAINTVGKVL  103 (262)
T ss_dssp             SHHHHHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            777889999999999999999999999764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=92.78  E-value=0.56  Score=42.35  Aligned_cols=77  Identities=16%  Similarity=0.318  Sum_probs=55.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      .++|.|++|.+|+.+++.+.+. ++.|+.+....+.       +.+    +......   +..|++.++.+.+.+..+.+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d-------l~~----~~~~~~D---vvIDfT~p~a~~~~~~~a~~   67 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP-------LSL----LTDGNTE---VVIDFTHPDVVMGNLEFLID   67 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC-------THH----HHHTTCC---EEEECSCTTTHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC-------HHH----HhccCCc---EEEEccChHHHHHHHHHHHH
Confidence            4789999999999999999876 8888755433322       111    1111222   56799999999988888776


Q ss_pred             hcCCccEEEecccc
Q psy6113          90 KFGGIDILVNNASA  103 (406)
Q Consensus        90 ~~g~iD~linnAG~  103 (406)
                      .  +++++|-..|.
T Consensus        68 ~--g~~~VigTTG~   79 (245)
T 1p9l_A           68 N--GIHAVVGTTGF   79 (245)
T ss_dssp             T--TCEEEECCCCC
T ss_pred             c--CCCEEEcCCCC
Confidence            5  68888887774

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=92.76  E-value=0.57  Score=42.86  Aligned_cols=33  Identities=30%  Similarity=0.462  Sum_probs=28.5

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.++..++++.++.+.+.||++|+||||||..
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~  115 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIG  115 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence            345667788999999999999999999999965

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=92.74  E-value=1.1  Score=41.99  Aligned_cols=37  Identities=22%  Similarity=0.201  Sum_probs=29.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHP   47 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~   47 (406)
                      ..+.|+|+ |.+|..++..|+..|.  .|++.|.+.++++
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~   46 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAI   46 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHH
Confidence            45788898 9999999999999997  8999999876654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=92.73  E-value=0.13  Score=49.49  Aligned_cols=38  Identities=26%  Similarity=0.496  Sum_probs=34.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      +|+||+++|.|. |.+|..+|+.|.+.|++|++.+++.+
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~  207 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKA  207 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            799999999997 77999999999999999998887654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=92.68  E-value=1.3  Score=42.18  Aligned_cols=39  Identities=23%  Similarity=0.367  Sum_probs=30.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-------eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-------NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-------~Vvl~~r~~   43 (406)
                      ..++.-.+.|+||+|+||..++..|++...       .+++.+.++
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~   65 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEP   65 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCC
Confidence            345566899999999999999999998643       588887754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=92.52  E-value=0.15  Score=47.59  Aligned_cols=39  Identities=26%  Similarity=0.342  Sum_probs=35.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.|++++|.|+ |+||+++++.|...|++|++.+|+.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~  191 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSA  191 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            4689999999997 89999999999999999999999764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=92.50  E-value=0.68  Score=42.79  Aligned_cols=77  Identities=21%  Similarity=0.195  Sum_probs=52.1

Q ss_pred             HHHHHHHHcCCeeeeeeec---------CCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhcc
Q psy6113          55 SAAKEVEDAGGNCLPCIVD---------IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA  125 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~D---------l~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~  125 (406)
                      ..+..+.+.|.++..+..+         .++.+..++..+++.+..+++..                             
T Consensus        43 aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------   93 (299)
T 3t7c_A           43 SHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIA-----------------------------   93 (299)
T ss_dssp             HHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEE-----------------------------
T ss_pred             HHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEE-----------------------------
Confidence            3566677777776554322         23577777777766543222211                             


Q ss_pred             ccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                         +.++.++..++++.++.+.+.||++|+||||||..
T Consensus        94 ---~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~  128 (299)
T 3t7c_A           94 ---SQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALA  128 (299)
T ss_dssp             ---EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             ---EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence               22355677788999999999999999999999965

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=92.49  E-value=0.38  Score=45.21  Aligned_cols=38  Identities=18%  Similarity=0.382  Sum_probs=31.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      ++...+.|+|+ |.+|.+++..|+.+|.  .|++.++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~   43 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEK   43 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhH
Confidence            34567888898 9999999999999984  79999987543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=92.48  E-value=0.034  Score=52.48  Aligned_cols=37  Identities=16%  Similarity=0.242  Sum_probs=31.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +.+++.|.|. |.+|..+|+.|++.|++|++.+|++++
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~   66 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPAR   66 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            4456777766 889999999999999999999998754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=92.47  E-value=0.69  Score=42.12  Aligned_cols=78  Identities=18%  Similarity=0.232  Sum_probs=52.6

Q ss_pred             HHHHHHHHcCCeeeeeee----------cCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhc
Q psy6113          55 SAAKEVEDAGGNCLPCIV----------DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN  124 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~----------Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~  124 (406)
                      ..+..+.+.|.++..+..          +..+.+..++..+.+.+..+++..                            
T Consensus        26 a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------   77 (277)
T 3tsc_A           26 AHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVA----------------------------   77 (277)
T ss_dssp             HHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEE----------------------------
T ss_pred             HHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEE----------------------------
Confidence            356667777777655422          123677777777766543222222                            


Q ss_pred             cccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                          +.++.++..++++.++.+.+.||++|+||||||...
T Consensus        78 ----~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~  113 (277)
T 3tsc_A           78 ----AVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA  113 (277)
T ss_dssp             ----EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence                123455677888999999999999999999999764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=92.40  E-value=0.64  Score=42.22  Aligned_cols=75  Identities=19%  Similarity=0.195  Sum_probs=52.5

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      ..+..+.+.|.++.  .+|..+.+..+++.+++.+..+++..                                +.++.+
T Consensus        33 aia~~l~~~G~~V~--~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~Dv~   78 (270)
T 3is3_A           33 AVAVHLGRLGAKVV--VNYANSTKDAEKVVSEIKALGSDAIA--------------------------------IKADIR   78 (270)
T ss_dssp             HHHHHHHHTTCEEE--EEESSCHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEE--EEcCCCHHHHHHHHHHHHhcCCcEEE--------------------------------EEcCCC
Confidence            35566667776554  34667777777777776553222221                                223455


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..++++.++.+.+.||++|+||||||..
T Consensus        79 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~  107 (270)
T 3is3_A           79 QVPEIVKLFDQAVAHFGHLDIAVSNSGVV  107 (270)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            67788899999999999999999999976

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=92.37  E-value=0.69  Score=44.01  Aligned_cols=38  Identities=18%  Similarity=0.414  Sum_probs=32.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|++..++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        32 ~~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~   70 (346)
T 1y8q_A           32 KRLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQ   70 (346)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCC
Confidence            3577899999997 7999999999999998 788987543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=92.35  E-value=0.048  Score=50.49  Aligned_cols=36  Identities=22%  Similarity=0.275  Sum_probs=30.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH   46 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~   46 (406)
                      +++.|.|. |.+|.++++.|++.|++|++.+|++++.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKA   37 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            35677775 8999999999999999999999988753

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=92.34  E-value=0.16  Score=47.19  Aligned_cols=39  Identities=23%  Similarity=0.382  Sum_probs=35.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.||+++|.|+ |+||+++++.|...|++|++.+|+.+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~  189 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESD  189 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            3688999999996 89999999999999999999998764

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=92.31  E-value=0.24  Score=47.03  Aligned_cols=76  Identities=22%  Similarity=0.367  Sum_probs=46.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|++++|+|+++++|...++.+...| ++|+.+++. ++           .+.+. .|....   .| .+.+-.++ +.+
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~-~~-----------~~~~~-~ga~~~---~~-~~~~~~~~-~~~  203 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAST-FK-----------HEAIK-DSVTHL---FD-RNADYVQE-VKR  203 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECG-GG-----------HHHHG-GGSSEE---EE-TTSCHHHH-HHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCH-HH-----------HHHHH-cCCcEE---Ec-CCccHHHH-HHH
Confidence            58999999999999999887666665 577777632 22           12222 343222   23 33332222 222


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +  .-+++|++|.++|.
T Consensus       204 ~--~~~g~Dvv~d~~g~  218 (349)
T 4a27_A          204 I--SAEGVDIVLDCLCG  218 (349)
T ss_dssp             H--CTTCEEEEEEECC-
T ss_pred             h--cCCCceEEEECCCc
Confidence            2  12479999999985

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=92.18  E-value=0.59  Score=42.78  Aligned_cols=74  Identities=26%  Similarity=0.293  Sum_probs=51.5

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      ..+..+.+.|.++  +.+|.++.+..+++.+++.+..+++..                                +.++.+
T Consensus        44 aia~~la~~G~~V--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~Dv~   89 (280)
T 4da9_A           44 GIARALAASGFDI--AITGIGDAEGVAPVIAELSGLGARVIF--------------------------------LRADLA   89 (280)
T ss_dssp             HHHHHHHHTTCEE--EEEESCCHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCeE--EEEeCCCHHHHHHHHHHHHhcCCcEEE--------------------------------EEecCC
Confidence            3556666677654  445777888888887777553222222                                123455


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +..++++.++.+.+.||++|+||||||.
T Consensus        90 d~~~v~~~~~~~~~~~g~iD~lvnnAg~  117 (280)
T 4da9_A           90 DLSSHQATVDAVVAEFGRIDCLVNNAGI  117 (280)
T ss_dssp             SGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            6677889999999999999999999994

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=92.17  E-value=0.13  Score=47.37  Aligned_cols=38  Identities=26%  Similarity=0.490  Sum_probs=34.3

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ++++++++|.|+ |++|+++++.|.+.|++|++.+|+.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~  163 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKE  163 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHH
Confidence            578899999997 69999999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	406
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	8e-34
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-31
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-30
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-29
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-27
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-24
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-26
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-26
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-25
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-25
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-25
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-25
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-24
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-24
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-24
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-23
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-23
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-16
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-23
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-11
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-23
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-14
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-23
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-23
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	8e-23
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	9e-23
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-22
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-22
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-17
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-22
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-22
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-12
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-22
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-22
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	5e-16
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-22
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-12
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	7e-22
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-22
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-22
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-21
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-21
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-21
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-21
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	7e-21
d1c44a_	123	d.106.1.1 (A:) Sterol carrier protein 2 (SCP2) {Ra	8e-21
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-20
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-20
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-16
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-20
d1ikta_	115	d.106.1.1 (A:) SCP2-like domain of MFE-2 {Human (H	1e-19
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-19
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-19
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-19
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	7e-18
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-17
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-11
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-17
d1pz4a_	113	d.106.1.1 (A:) Sterol carrier protein 2 (SCP2) {Ye	5e-17
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-17
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-14
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-16
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-13
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-16
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-13
d2cfua1	126	d.106.1.3 (A:530-655) Alkylsulfatase SdsA1 {Pseudo	1e-15
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	9e-15
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-11
d1wfra_	143	d.106.1.1 (A:) Hypothetical protein TT1886 (TTHA04	2e-14
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	7e-14
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-10
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-14
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-07
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-13
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-11
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-13
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	9e-12
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-13
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-13
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	3e-12
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-12
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-11
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-11
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	7e-06
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	7e-11
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-09
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-10
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	6e-10
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-07
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-08
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	7e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	0.001

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  125 bits (316), Expect = 8e-34
 Identities = 58/304 (19%), Positives = 109/304 (35%), Gaps = 70/304 (23%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +  G  + +TGA  G+G+A AL  A+ GA +V                            
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVV---------------------------- 35

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                + D+  +       ++A DK                            ++ +I  
Sbjct: 36  -----VNDLGGDFKGVGKGSSAADK----------------------------VVEEIRR 62

Query: 126 RGTYLVKASQGLE-IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
           RG   V     +E  +  V  A+D FG ID++VNNA  +     +    + +D++ +++ 
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHL 122

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
           RG++ V++    ++KK N+  I+  +    +   +      Y+ +K G+   A  +  E 
Sbjct: 123 RGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF--GQANYSAAKLGLLGLANTLVIEG 180

Query: 245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQF 304
           + +NI  N + P      A   M      +    + KPE +A    + L        G  
Sbjct: 181 RKNNIHCNTIAP-----NAGSRMTETVMPEDLVEALKPEYVAPLVLW-LCHESCEENGGL 234

Query: 305 LIDD 308
               
Sbjct: 235 FEVG 238

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 4e-31
 Identities = 50/312 (16%), Positives = 94/312 (30%), Gaps = 75/312 (24%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            +       +TGAS GIG A+A    + G  +V  A                        
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA------------------------ 41

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                     R    ++              ++        L++                
Sbjct: 42  ----------RTVGNIEELAAECKSAGYPGTLI---PYRCDLSNEE-------------- 74

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                        +I S  +A   +  G+DI +NNA         +     +  M  +N 
Sbjct: 75  -------------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNV 121

Query: 185 RGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
               + +++    +K+ N    HI+NI+               Y+ +KY ++    G+ +
Sbjct: 122 LALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 181

Query: 243 EFK--GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------KPEIMADAAYYILS 294
           E +    +I    + P   + T     L     +  A +       KPE +A+A  Y+LS
Sbjct: 182 ELREAQTHIRATCISP-GVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLS 240

Query: 295 SNPPSLTGQFLI 306
           +      G   +
Sbjct: 241 TPAHIQIGDIQM 252

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  115 bits (289), Expect = 2e-30
 Identities = 63/310 (20%), Positives = 102/310 (32%), Gaps = 77/310 (24%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L   T+ +TG ++GIG AI  + A  GA I   A                          
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA-------------------------- 39

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                   R+E+ +   ++    K   +   V +AS                        
Sbjct: 40  --------RNEYELNECLSKWQKKGFQVTGSVCDASLRP--------------------- 70

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
                      E +  +      FGG +DIL+NN  AI    T +   + +      N  
Sbjct: 71  -----------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 119

Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
             Y +SQ   P LK S   +I+ +S    +          Y+ +K  ++  A  +A E+ 
Sbjct: 120 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--GSIYSATKGALNQLARNLACEWA 177

Query: 246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPP 298
            D I  NA+ P   I T   E +          SR       +PE ++    ++      
Sbjct: 178 SDGIRANAVAP-AVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS 236

Query: 299 SLTGQFLIDD 308
            +TGQ +  D
Sbjct: 237 YITGQTICVD 246

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  112 bits (281), Expect = 2e-29
 Identities = 55/311 (17%), Positives = 103/311 (33%), Gaps = 79/311 (25%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L      ITG + GIG+AIA + A +GA+I                             
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIA---------------------------- 33

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                I D+      ++A+     +   +           ++                  
Sbjct: 34  -----IADLVPAPEAEAAIRNLGRRVLTV--------KCDVSQPG--------------- 65

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
                       ++++     +  FG  DILVNNA    L        +++    +IN  
Sbjct: 66  ------------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVD 113

Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK 245
             +L+++  +P +K++    I+N++            +  Y  +K         +A +  
Sbjct: 114 SGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA--YTHYISTKAANIGFTRALASDLG 171

Query: 246 GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR--------KPEIMADAAYYILSSNP 297
            D I VNA+ P + + TA  E     +      +          P  +  AA ++ S + 
Sbjct: 172 KDGITVNAIAP-SLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 230

Query: 298 PSLTGQFLIDD 308
             +TGQ L  D
Sbjct: 231 SFITGQTLAVD 241

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  106 bits (267), Expect = 3e-27
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G  +G  + +TG +RGIG+AIA   A++GA + +     E             +  E  G
Sbjct: 1   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----------GKEVAEAIG 49

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           G       D+ DE      V  A    G +D+LVNNA+  +        L ++  + ++N
Sbjct: 50  GAFFQV--DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVN 107

Query: 125 ARGTYLV 131
                 +
Sbjct: 108 LTAPMHL 114

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 98.0 bits (244), Expect = 4e-24
 Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 15/183 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E    V  A    G +D+LVNNA+  +        L ++  + ++N      +S      
Sbjct: 62  ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAARE 121

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           ++K     I+N++    L       + AY  SK G+      +A +     I VNA+ P 
Sbjct: 122 MRKVGGGAIVNVASVQGLFAEQ--ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP- 178

Query: 258 TAIYTAAIEMLTGGSADAKATSR------------KPEIMADAAYYILSSNPPSLTGQFL 305
            AI T A+      S D + T R            KPE +A+A  ++ S     +TG  L
Sbjct: 179 GAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAIL 238

Query: 306 IDD 308
             D
Sbjct: 239 PVD 241

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  105 bits (262), Expect = 1e-26
 Identities = 56/308 (18%), Positives = 101/308 (32%), Gaps = 79/308 (25%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G+L+G    ++G +RG+G +       +GA +V                           
Sbjct: 2   GRLTGKVALVSGGARGMGASHVRAMVAEGAKVV--------------------------- 34

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                   DI DE        A   +       V     + +T  A              
Sbjct: 35  ------FGDILDE-----EGKAMAAELADAARYV----HLDVTQPA-------------- 65

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
                        + ++AV+ AV  FGG+ +LVNNA  +++    +  L ++  +  +N 
Sbjct: 66  -------------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNL 112

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
            G +L  +  +  +K++    I  I+               YT +K+ +       A E 
Sbjct: 113 TGVFLGIRAVVKPMKEAGRGSI--INISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL 170

Query: 245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK----PEIMADAAYYILSSNPPSL 300
               I VN++ P   + T    M      D   T+      P  +++   Y+ S      
Sbjct: 171 GPSGIRVNSIHP-GLVKT---PMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYS 226

Query: 301 TGQFLIDD 308
           TG   + D
Sbjct: 227 TGAEFVVD 234

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  103 bits (258), Expect = 3e-26
 Identities = 49/295 (16%), Positives = 100/295 (33%), Gaps = 65/295 (22%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + ITGA +GIG+AIAL+ A+   +                                   +
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVL---------------------------V 36

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
           +  R    ++        +    D +  +     ++D A                     
Sbjct: 37  LSSRTAADLEKISLECRAEGALTDTITAD-----ISDMA--------------------- 70

Query: 132 KASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVS 191
                 +++      V+++G ID LVNNA        ++   + +D     N +GT+ ++
Sbjct: 71  ------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLT 124

Query: 192 QKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
           Q     +++ +  HI  I+         F++   Y +SK+G       M    +  N+ +
Sbjct: 125 QALFALMERQHSGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182

Query: 252 NALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI 306
             + P  A+YT    M      + +A    PE +A            ++  + ++
Sbjct: 183 TDVQP-GAVYT---PMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEIIL 233

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  102 bits (255), Expect = 1e-25
 Identities = 51/318 (16%), Positives = 98/318 (30%), Gaps = 86/318 (27%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T +L G    +TG + G+G  +      +GA +                           
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVA-------------------------- 34

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                    DI +      A      + G   + V       ++  A             
Sbjct: 35  -------FSDINEA-----AGQQLAAELGERSMFV----RHDVSSEA------------- 65

Query: 124 NARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 183
                         +    + A   + G +++LVNNA  +   D     L+ +  + +IN
Sbjct: 66  --------------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKIN 111

Query: 184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
               ++  Q+ +  +K+     I+N++   +  P     +  Y+ SK  +S      A  
Sbjct: 112 TESVFIGCQQGIAAMKE-TGGSIINMASVSSWLPIE--QYAGYSASKAAVSALTRAAALS 168

Query: 244 F--KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADAAY 290
              +G  I VN++ P   IYT  ++         +                PE +A    
Sbjct: 169 CRKQGYAIRVNSIHP-DGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVL 227

Query: 291 YILSSNPPSLTGQFLIDD 308
           ++ S     ++G  L  D
Sbjct: 228 FLASDESSVMSGSELHAD 245

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  101 bits (253), Expect = 2e-25
 Identities = 64/309 (20%), Positives = 104/309 (33%), Gaps = 79/309 (25%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           LSG T+ ITG +RG+G   A +A   GA +V                             
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVV----------------------------- 33

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
               + D+ DE        A   + G           + +T                   
Sbjct: 34  ----LADVLDE-----EGAATARELGDAARYQ----HLDVTIEE---------------- 64

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                      + Q  V  A ++FG +D LVNNA   +        ++++  + +IN  G
Sbjct: 65  -----------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTG 113

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
            ++  +  +P +K +    I+NIS    L         +Y  SK+G+   +   A E   
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL--TSSYGASKWGVRGLSKLAAVELGT 171

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATS-------RKPEIMADAAYYILSSNPPS 299
           D I VN++ P    YT           +    +        +P  +A A   +LS     
Sbjct: 172 DRIRVNSVHP-GMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY 230

Query: 300 LTGQFLIDD 308
           +TG  L  D
Sbjct: 231 VTGAELAVD 239

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  101 bits (253), Expect = 3e-25
 Identities = 53/323 (16%), Positives = 103/323 (31%), Gaps = 86/323 (26%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           + +     ITG+S GIG+A A+  A++GA +                             
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVT---------------------------- 33

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                I     E      +     +     +   N +++             D+      
Sbjct: 34  -----ITGRHAE-----RLEETRQQILAAGVSEQNVNSVVA-----------DV------ 66

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT----PLKKYDLMNQ 181
                   +        ++  + KFG +DILVNNA A      + T     ++ YD    
Sbjct: 67  --------TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLN 118

Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA 241
           +N R    +++K +P+L  +    +   S    L+     +   Y+I+K  +       A
Sbjct: 119 LNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA--TPDFPYYSIAKAAIDQYTRNTA 176

Query: 242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR---------------KPEIMA 286
            +     I VN++ P   + T     +      +K                   +P+ +A
Sbjct: 177 IDLIQHGIRVNSISP-GLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIA 235

Query: 287 DAAYYILSSNPPS-LTGQFLIDD 308
           +   ++      S + G  L+ D
Sbjct: 236 EVIAFLADRKTSSYIIGHQLVVD 258

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  101 bits (252), Expect = 3e-25
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TG SRG+G  IA   A+ G ++V+A++  E   +       A K  E  G  
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEA------AQKLTEKYGVE 56

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
            +    D+ +   V+  + A  +KFG +D +VN A           PL ++  + ++N
Sbjct: 57  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVN 114

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 99.8 bits (248), Expect = 1e-24
 Identities = 50/314 (15%), Positives = 85/314 (27%), Gaps = 78/314 (24%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
               TI +TG +RGIG A     A  GAN+ +                            
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIY-------------------------- 40

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                   R              +FG             +++T                 
Sbjct: 41  --------RSAADAVEVTEKVGKEFGVKTKAY----QCDVSNTD---------------- 72

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                       +   +       G I  L+ NA    +        + +  +  +N  G
Sbjct: 73  -----------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFG 121

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPF------WFKNHVAYTISKYGMSMCALGM 240
            +   +       +      + ++  ++               V Y  SK   S    G+
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 181

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------KPEIMADAAYYILS 294
           A E+    I VNAL P   + T     +     D +A++       +PE M   A  +LS
Sbjct: 182 AAEWASAGIRVNALSP-GYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS 240

Query: 295 SNPPSLTGQFLIDD 308
            +   +TG     D
Sbjct: 241 DHATYMTGGEYFID 254

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 99.3 bits (247), Expect = 2e-24
 Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG- 64
           + S  T+ ITG+S GIG+  A+  A++GAN+ I  +++E        +    + +  +G 
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER-------LEETRQIILKSGV 54

Query: 65  --GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS----LTDTANTPLKKYD 118
                   + D+  E      +N+ + +FG ID+LVNNA A       T   +  +  Y 
Sbjct: 55  SEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYH 114

Query: 119 LMNQINARGTYLV 131
              ++N +    +
Sbjct: 115 KTLKLNLQAVIEM 127

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.2 bits (246), Expect = 2e-24
 Identities = 57/306 (18%), Positives = 113/306 (36%), Gaps = 48/306 (15%)

Query: 14  ITGASRGIGKAIALK-AAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
           +TG ++GIG AI          ++V+ A+              A ++++  G +     +
Sbjct: 8   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQA-------AVQQLQAEGLSPRFHQL 60

Query: 73  DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVK 132
           DI D  ++++  +    ++GG+D+LVNNA              + ++  + N  GT  V 
Sbjct: 61  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDV- 119

Query: 133 ASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
                     +   +   G +  + +  S  +L   +    +K+                
Sbjct: 120 ------CTELL-PLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI----------- 161

Query: 193 KCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF----KGDN 248
                L    +  + +    ++    W     AY ++K G+++ +   A +     KGD 
Sbjct: 162 -TEEELVGLMNKFVEDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKLSEQRKGDK 218

Query: 249 IAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSL---TGQFL 305
           I +NA  P   + T   +M           ++ PE  A+   Y L+  PP      GQF+
Sbjct: 219 ILLNACCP-GWVRT---DMA------GPKATKSPEEGAETPVY-LALLPPDAEGPHGQFV 267

Query: 306 IDDEVL 311
            +  V 
Sbjct: 268 SEKRVE 273

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 1e-23
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G L G    +TG + GIGKAI  +  + G+N+VIA++  E        +   A       
Sbjct: 8   GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL--QANLPPTKQ 65

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
              +P   +IR+E  V + V + +D FG I+ LVNN     L+   +   K +  + + N
Sbjct: 66  ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETN 125

Query: 125 ARGTYLV 131
             GT+ +
Sbjct: 126 LTGTFYM 132

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 95.5 bits (237), Expect = 4e-23
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 8/126 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G T  +TG SRGIG  I  + A  GA++   ++  +        +     +    G  
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-------LNDCLTQWRSKGFK 58

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINA 125
               + D+      Q  +N   + F G ++ILVNNA  +   +  +  ++ Y L+  IN 
Sbjct: 59  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF 118

Query: 126 RGTYLV 131
              Y +
Sbjct: 119 EAAYHL 124

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 15/183 (8%)

Query: 138 EIQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E Q  +N   + F G ++ILVNNA  +   +  +  ++ Y L+  IN    Y +S    P
Sbjct: 71  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 130

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
           +LK S   +++ IS         +     Y  +K  M      +A E+  DNI VN + P
Sbjct: 131 FLKASERGNVVFISSVSGALAVPY--EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 188

Query: 257 RTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADAAYYILSSNPPSLTGQFL 305
              I T+ +EM        +  ++           +P+ +A    ++       +TGQ +
Sbjct: 189 -GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQII 247

Query: 306 IDD 308
             D
Sbjct: 248 YVD 250

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 95.1 bits (236), Expect = 5e-23
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 10/122 (8%)

Query: 1   MINTG--KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAK 58
           M N+   +L G    ITGA  GIGK IA+  A  GA++V++   A+    +         
Sbjct: 1   MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHV-------VD 53

Query: 59  EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
           E++  GG    C  DI  E  + +  + A+ K G +DILVNNA         + P+  + 
Sbjct: 54  EIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA-GGGGPKPFDMPMADFR 112

Query: 119 LM 120
             
Sbjct: 113 RA 114

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 62.0 bits (150), Expect = 1e-11
 Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 11/178 (6%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E+ +  + A+ K G +DILVNNA         + P+  +    ++N    + +SQ   P 
Sbjct: 74  ELSALADFAISKLGKVDILVNNA-GGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           ++K+    IL I+     N        A +      S     MA +    NI VN + P 
Sbjct: 133 MEKNGGGVILTITSMAAENKNINMTSYASSK--AAASHLVRNMAFDLGEKNIRVNGIAP- 189

Query: 258 TAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
            AI T A++ +     + K           +P+ +A+AA ++ S     ++GQ L   
Sbjct: 190 GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVS 247

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 95.1 bits (236), Expect = 6e-23
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 12/131 (9%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           + SG ++ ITG+S GIG++ A+  AK+GA + I  +  +        +    +++  AG 
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDR-------LEETKQQILKAGV 53

Query: 66  ---NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANT--PLKKYDLM 120
                   + D+ +       +N  + KFG IDILVNNA A     TANT  P++ Y   
Sbjct: 54  PAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT 113

Query: 121 NQINARGTYLV 131
            ++N +    +
Sbjct: 114 FKLNFQAVIEM 124

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 69.3 bits (169), Expect = 6e-14
 Identities = 42/188 (22%), Positives = 68/188 (36%), Gaps = 19/188 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANT--PLKKYDLMNQINARGTYLVSQKCL 195
                +N  + KFG IDILVNNA A     TANT  P++ Y    ++N +    +  +  
Sbjct: 70  GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM-TQKT 128

Query: 196 PYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
                     I+N+S  +   P     +  Y  +K  +       A +     + VN++ 
Sbjct: 129 KEHLIKTKGEIVNVSSIVA-GPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVS 187

Query: 256 P---RTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADAAYYILSSNPPS-L 300
           P    T    A     T                      KPE +A+   ++   N  S +
Sbjct: 188 PGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYI 247

Query: 301 TGQFLIDD 308
            GQ ++ D
Sbjct: 248 IGQSIVAD 255

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.6 bits (235), Expect = 7e-23
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 12/127 (9%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           + +G  + +TG  RGIG  I       GA +VI  K                + +E    
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDES-----------GGRALEQELP 51

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA-NTPLKKYDLMNQIN 124
             +  + D+  E  V++ V+  + +FG +D +VNNA           T  + +  + ++N
Sbjct: 52  GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELN 111

Query: 125 ARGTYLV 131
             GTY +
Sbjct: 112 LLGTYTL 118

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.3 bits (234), Expect = 7e-23
 Identities = 56/310 (18%), Positives = 100/310 (32%), Gaps = 84/310 (27%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
            SGL   +TGA +GIG+         GA +V   +T                 +      
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS-----------DLVSLAKECPG 51

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
             P  VD+ D  A +     A+   G +D+LVNNA+ + +        + +D    +N R
Sbjct: 52  IEPVCVDLGDWDATE----KALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR 107

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
             + V        Q      +++     I VN +S ++     N                
Sbjct: 108 SVFQV-------SQMVARDMINRGVPGSI-VNVSSMVAHVTFPNLI-------------- 145

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
           TY  ++  +  L K+                                      MA E   
Sbjct: 146 TYSSTKGAMTMLTKA--------------------------------------MAMELGP 167

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK--------PEIMADAAYYILSSNPP 298
             I VN++ P T + T   + ++     A+    +         E + ++  ++LS    
Sbjct: 168 HKIRVNSVNP-TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 226

Query: 299 SLTGQFLIDD 308
           S +G  ++ D
Sbjct: 227 STSGGGILVD 236

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 8e-23
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           ++G  + ITGA  GIG+  A + AK  + +V+              +   A + +  G  
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG-------LEETAAKCKGLGAK 57

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
               +VD  +   + S+      + G + ILVNNA  +  +D   T   + +   ++N  
Sbjct: 58  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL 117

Query: 127 GTYLV 131
             +  
Sbjct: 118 AHFWT 122

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 94.4 bits (234), Expect = 9e-23
 Identities = 51/317 (16%), Positives = 108/317 (34%), Gaps = 80/317 (25%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           + +   + ITG   G+G+A A++ A +GA + +                           
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVD------------------------- 35

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                         ++++  A ++     ++L   A    ++D A               
Sbjct: 36  ---------VSSEGLEASKAAVLETAPDAEVLTTVAD---VSDEA--------------- 68

Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA-SAISLTDTANTPLKKYDLMNQINA 184
                       ++++ V A  ++FG ID   NNA        T +    ++D +  IN 
Sbjct: 69  ------------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 116

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
           RG +L  +K L  +++     ++N +    +      N   Y  +K+G+       A E+
Sbjct: 117 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG--NQSGYAAAKHGVVGLTRNSAVEY 174

Query: 245 KGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSR----------KPEIMADAAYY 291
               I +NA+ P    T +   +++ L   +    A             +   +A    +
Sbjct: 175 GRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAF 234

Query: 292 ILSSNPPSLTGQFLIDD 308
           +LS +   +    +  D
Sbjct: 235 LLSDDASYVNATVVPID 251

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 94.0 bits (233), Expect = 1e-22
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           +  L+G     TGA RGIG+ IA++  + GA++V+   ++    +          E++  
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAE------EVVAELKKL 54

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
           G   +    DI     V +  + AV  FGG+D +++N+      D      + +D +  +
Sbjct: 55  GAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNL 114

Query: 124 NARGTY 129
           N RG +
Sbjct: 115 NTRGQF 120

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 93.9 bits (233), Expect = 1e-22
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 8/125 (6%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
            +L G    ITG + GIG AIA K  ++GA ++I  + ++   K       AAK V    
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEK-------AAKSVG-TP 53

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                   D  DE       +A    FG +  LVNNA          T   ++  +  +N
Sbjct: 54  DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVN 113

Query: 125 ARGTY 129
             G +
Sbjct: 114 LDGVF 118

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 78.9 bits (194), Expect = 2e-17
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 13/181 (7%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
                 +A    FG +  LVNNA          T   ++  +  +N  G +  ++  +  
Sbjct: 68  GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127

Query: 198 LKKSNH-AHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF--KGDNIAVNAL 254
           +K     A I+N+S           +  AY  SK  + + +   A +   K  ++ VN +
Sbjct: 128 MKNKGLGASIINMSSIEGFVG--DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185

Query: 255 WPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLID 307
            P   I T  ++ L G        ++       +P  +A    Y+ S+     TG   + 
Sbjct: 186 HPG-YIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVV 244

Query: 308 D 308
           D
Sbjct: 245 D 245

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 93.2 bits (231), Expect = 1e-22
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 10/125 (8%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G+LSG TI +TGA+ GIG+A     A++GA++V   +               A+ V    
Sbjct: 1   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREER----------LLAEAVAALE 50

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
              +  + D+ D  AV++    A+++FG +  + + A       + N PL+ ++ + ++N
Sbjct: 51  AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVN 110

Query: 125 ARGTY 129
             G++
Sbjct: 111 LTGSF 115

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 93.6 bits (232), Expect = 3e-22
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 22/169 (13%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           KL G  + ITG + G+G+A+  +   +GA + +  K+AE            A+   D G 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAE----------RLAELETDHGD 51

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA-----SAISLTDTANTPLKKYDLM 120
           N L  + D+R     + A +  V +FG ID L+ NA     S   +     +    +D +
Sbjct: 52  NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV 111

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA 169
             IN +G           +++ + A V   G +   ++NA         
Sbjct: 112 FHINVKGYIHA-------VKACLPALVASRGNVIFTISNAGFYPNGGGP 153

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 63.5 bits (154), Expect = 5e-12
 Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 27/193 (13%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNA-----SAISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
           + + A +  V +FG ID L+ NA     S   +     +    +D +  IN +G     +
Sbjct: 65  DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124

Query: 193 KCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
            CLP L  S    I  IS   N   +       YT +K+ +      +A E     + VN
Sbjct: 125 ACLPALVASRGNVIFTIS---NAGFYPNGGGPLYTAAKHAIVGLVRELAFEL-APYVRVN 180

Query: 253 ALWPRTAIYTAAIEMLTGGSADAKATSR----------------KPEIMADAAYYILSSN 296
            +     I +      + G      ++                 + E    A  +  +  
Sbjct: 181 GVGS-GGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRG 239

Query: 297 PPS-LTGQFLIDD 308
             +  TG  L  D
Sbjct: 240 DAAPATGALLNYD 252

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 92.8 bits (230), Expect = 4e-22
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 10/129 (7%)

Query: 4   TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           T +L      ITG + GIG+  A    + GA +VIA    +   K+          +  +
Sbjct: 1   TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV-------CNNIG-S 52

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA--NTPLKKYDLMN 121
                    D+  +  V++ V+  + K G +DI+  N   +S T  +      + +  + 
Sbjct: 53  PDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVM 112

Query: 122 QINARGTYL 130
            IN  G +L
Sbjct: 113 DINVYGAFL 121

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 92.4 bits (229), Expect = 4e-22
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 14/121 (11%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           T  +T      G   AL+ ++ G  +    ++ +              E+E         
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-----------QKDELEAFAETYPQL 50

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINARGTY 129
                 E      + A    +G +D+LV+N   A          ++ Y    +      +
Sbjct: 51  --KPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPF 108

Query: 130 L 130
            
Sbjct: 109 A 109

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 75.1 bits (184), Expect = 5e-16
 Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 16/185 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E    + A    +G +D+LV+N   A          ++ Y    +      + +      
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
            +KK    HI+ I+         +K    YT ++ G    A  +++E    NI V A+ P
Sbjct: 117 QMKKRKSGHIIFITS--ATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174

Query: 257 ------RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQ 303
                  +  +       T     A              + + +   ++ S +   LTGQ
Sbjct: 175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234

Query: 304 FLIDD 308
                
Sbjct: 235 VFWLA 239

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 92.1 bits (228), Expect = 7e-22
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G T  +TG S+GIG AI  + A  GA +   ++  +   +         +   + G N
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE-------CLEIWREKGLN 56

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINA 125
               + D+         +      F G ++ILVNNA  +   +  +   K Y+++   N 
Sbjct: 57  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNF 116

Query: 126 RGTY 129
              Y
Sbjct: 117 EAAY 120

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 64.8 bits (157), Expect = 2e-12
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 14/183 (7%)

Query: 138 EIQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
           E    +      F G ++ILVNNA  +   +  +   K Y+++   N    Y +SQ   P
Sbjct: 69  ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 128

Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL-- 254
            LK S + +++ +S     +         Y+ SK  ++     +A E+  DNI VN++  
Sbjct: 129 LLKASQNGNVIFLSSIAGFSALPS--VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 186

Query: 255 -WPRTAIYTAAIEMLTGGSADAKATSRK--------PEIMADAAYYILSSNPPSLTGQFL 305
               T +   AI+       +      K        P+ ++    ++       +TGQ +
Sbjct: 187 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQII 246

Query: 306 IDD 308
             D
Sbjct: 247 WAD 249

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 91.8 bits (227), Expect = 7e-22
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L G T  ITG++RGIG+A A    ++GA + IA    E          +A     + G 
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLE----------AARATAAEIGP 51

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                 +D+ D+ ++   V   +D++G IDILVNNA+   L        + YD +  IN 
Sbjct: 52  AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINV 111

Query: 126 RGTYL 130
            GT  
Sbjct: 112 SGTLF 116

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 9e-22
 Identities = 55/316 (17%), Positives = 94/316 (29%), Gaps = 96/316 (30%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
           G    +TGA++GIG+A A      GA + +                              
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVD---------------------------- 34

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
                  +  A      A  ++F     L        + D                    
Sbjct: 35  ------WNLEAGVQCKAALHEQFEPQKTL---FIQCDVADQQ------------------ 67

Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 188
                    +++      VD FG +DILVNNA   +  +        ++   QIN     
Sbjct: 68  ---------QLRDTFRKVVDHFGRLDILVNNAGVNNEKN--------WEKTLQINLVSVI 110

Query: 189 LVSQKCLPYLKKSNHAH---ILNISPPLNLNPFWFKNHVAYTISKYGMSMCA--LGMAEE 243
             +   L Y+ K N      I+N+S    L P        Y  SK+G+        +A  
Sbjct: 111 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP--VAQQPVYCASKHGIVGFTRSAALAAN 168

Query: 244 FKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK--------------PEIMADAA 289
                + +NA+ P   + TA +E +       +    K              P ++A+  
Sbjct: 169 LMNSGVRLNAICP-GFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 227

Query: 290 YYILSSNPPSLTGQFL 305
             ++     +L G  +
Sbjct: 228 ITLIE--DDALNGAIM 241

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 91.7 bits (227), Expect = 9e-22
 Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  + ITG+S G+GK++A++ A + A +V+  ++ E          S  +E++  GG 
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN------SVLEEIKKVGGE 58

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            +    D+  E  V + V +A+ +FG +D+++NNA   +   +    L  ++ +   N  
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 127 GTY 129
           G +
Sbjct: 119 GAF 121

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 91.1 bits (225), Expect = 1e-21
 Identities = 45/307 (14%), Positives = 90/307 (29%), Gaps = 68/307 (22%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           +S  ++ +TGA+RGIG  +  +  KD    +I+  A+  E           A +      
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----------ATELKSIKD 50

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFG--GIDILVNNA-SAISLTDTANTPLKKYDLMN 121
                  + +  + ++ + V+   +  G  G+ +L+NNA   +S                
Sbjct: 51  SRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQL 110

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 181
            +N     L+               +                              L+  
Sbjct: 111 DVNTTSVVLL-----------TQKLL-----------------------------PLLKN 130

Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA 241
             ++ +          +   +               F     +AY +SK  ++M    +A
Sbjct: 131 AASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPV---LAYRMSKAAINMFGRTLA 187

Query: 242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLT 301
            + K DN+ V    P   + T     L G +A         E          +    S  
Sbjct: 188 VDLKDDNVLVVNFCP-GWVQTN----LGGKNAA-----LTVEQSTAELISSFNKLDNSHN 237

Query: 302 GQFLIDD 308
           G+F + +
Sbjct: 238 GRFFMRN 244

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 91.0 bits (225), Expect = 1e-21
 Identities = 66/320 (20%), Positives = 105/320 (32%), Gaps = 85/320 (26%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G    +TG++ GIG  IA   A  GA+IV+                            
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNG-------------------------- 35

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                     + A    V A +    G+ +L + A    L+                   
Sbjct: 36  --------FGDAAEIEKVRAGLAAQHGVKVLYDGAD---LSKGE---------------- 68

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 186
                       ++  V+ AV + G IDILVNNA         + P +K+D +  +N   
Sbjct: 69  -----------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSA 117

Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
            +  +   LP++KK     I+NI+           N  AY  +K+G+       A E  G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHG--LVASANKSAYVAAKHGVVGFTKVTALETAG 175

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR------------------KPEIMADA 288
             I  NA+ P   + T  +E      A+     +                   PE +   
Sbjct: 176 QGITANAICP-GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234

Query: 289 AYYILSSNPPSLTGQFLIDD 308
           A ++ S     +TG  +  D
Sbjct: 235 AVFLASDAAAQITGTTVSVD 254

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 91.1 bits (225), Expect = 2e-21
 Identities = 51/306 (16%), Positives = 94/306 (30%), Gaps = 64/306 (20%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVD 73
           ITG +R IG +IA++  + G  +V+  + +E   +        A+      G+ + C  D
Sbjct: 6   ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQR-----LVAELNAARAGSAVLCKGD 60

Query: 74  IRD----EHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
           +          +  ++ +   FG  D+LVNNASA   T              +       
Sbjct: 61  LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDA--- 117

Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 189
                                                        +   +   NA     
Sbjct: 118 ---------------------------------------------QVAELFGSNAVAPLF 132

Query: 190 VSQKCLPYLKKSNHAHILNISPPL---NLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
           + +       +       N+S       +          YT++K+ +       A E   
Sbjct: 133 LIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAP 192

Query: 247 DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRK----PEIMADAAYYILSSNPPSLTG 302
            +I VNA+ P  ++   A+   T      K    +       +ADA  +++S +   +TG
Sbjct: 193 RHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITG 252

Query: 303 QFLIDD 308
             L  D
Sbjct: 253 TTLKVD 258

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 90.1 bits (223), Expect = 2e-21
 Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 21/180 (11%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           +L    + ITGA+ GIG+A     AK+GA +V       P            +  E  G 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP----------LREAAEAVGA 51

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
           + +    D+ D  +V+     A+   G +D +V+ A           PL+ ++L+ ++N 
Sbjct: 52  HPVVM--DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL 109

Query: 126 RGTYLV---------KASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
            G++LV         + + G  + +A    +   G  +   + A  + LT T    L ++
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRW 169

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 89.4 bits (221), Expect = 7e-21
 Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 6/127 (4%)

Query: 3   NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
            +  L G    +TGA RGIG+ +A++  + G  +++    +    +           ++ 
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAE------EVVAAIKK 65

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
            G +      ++     +      AV  FG +DI+ +N+  +S     +   +++D +  
Sbjct: 66  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT 125

Query: 123 INARGTY 129
           IN RG +
Sbjct: 126 INTRGQF 132

>d1c44a_ d.106.1.1 (A:) Sterol carrier protein 2 (SCP2) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 123

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: Sterol carrier protein 2 (SCP2)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 85.3 bits (211), Expect = 8e-21
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 2/81 (2%)

Query: 327 GAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS 386
           G  E +W +D+K G GS          D T+TM + + +AL  GK+ P SAF  GKLKI+
Sbjct: 44  GGKEATWVVDVKNGKGSVLPNSDKKA-DCTITMADSDLLALMTGKMNPQSAFFQGKLKIT 102

Query: 387 GNLQKAMKLEKLMGAL-KSKL 406
           GN+  AMKL+ L     K+KL
Sbjct: 103 GNMGLAMKLQNLQLQPGKAKL 123

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 87.9 bits (217), Expect = 2e-20
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
              +TGA +GIGKAIAL+  KDG  + IA            T  + A E+  AGG+ +  
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDA-------TAKAVASEINQAGGHAVAV 55

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
            VD+ D   V +AV  A    GG D++VNNA     T   +   +  D +  IN +G  
Sbjct: 56  KVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVI 114

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.4 bits (216), Expect = 2e-20
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+G  + +TGA +GIG+         GA +V  ++T                 +      
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA-----------DLDSLVRECPG 53

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
             P  VD+ D  A +     A+   G +D+LVNNA+   L        + +D   ++N R
Sbjct: 54  IEPVCVDLGDWEATE----RALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLR 109

Query: 127 GTYLV 131
               V
Sbjct: 110 AVIQV 114

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 12/177 (6%)

Query: 141 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP-YLK 199
            A   A+   G +D+LVNNA+   L        + +D   ++N R    VSQ      + 
Sbjct: 65  EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIA 124

Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA 259
           +     I+N+S   +       NH  Y  +K  + M    MA E     I VNA+ P T 
Sbjct: 125 RGVPGAIVNVSSQCSQR--AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP-TV 181

Query: 260 IYTAAIEMLTGGSADAKATSRK--------PEIMADAAYYILSSNPPSLTGQFLIDD 308
           + T+  +        AK    +         E + +A  ++LS      TG  L  +
Sbjct: 182 VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVE 238

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 85.9 bits (212), Expect = 7e-20
 Identities = 63/304 (20%), Positives = 105/304 (34%), Gaps = 75/304 (24%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           + +TGASRGIGKAIAL   K G  +++                                 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVN-------------------------------- 31

Query: 72  VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
              R   A +  V+  ++ +GG  I                     D+  +         
Sbjct: 32  -YARSAKAAE-EVSKQIEAYGGQAITF-----------------GGDVSKEA-------- 64

Query: 132 KASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVS 191
                 ++++ +  A+D +G ID++VNNA     T        ++D +  +N  G +L +
Sbjct: 65  ------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCT 118

Query: 192 QKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
           Q     + K     I+NI+  + L          Y  +K G+   +   A E    NI V
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGN--IGQANYAAAKAGVIGFSKTAAREGASRNINV 176

Query: 252 NALWPRTAIYTAAIEMLTGGSADAKATSR------KPEIMADAAYYILSSNPPS-LTGQF 304
           N + P   I +     L          +       +PE +A    ++  S   S +TGQ 
Sbjct: 177 NVVCPG-FIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA 235

Query: 305 LIDD 308
              D
Sbjct: 236 FTID 239

>d1ikta_ d.106.1.1 (A:) SCP2-like domain of MFE-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: SCP2-like domain of MFE-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.9 bits (202), Expect = 1e-19
 Identities = 26/80 (32%), Positives = 45/80 (56%)

Query: 320 QYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFM 379
           ++     G     W IDLK+GSG   +G      D T+ +++++F+ +  GKL P  AF 
Sbjct: 30  EWHITKGGNIGAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFMEVVLGKLDPQKAFF 89

Query: 380 TGKLKISGNLQKAMKLEKLM 399
           +G+LK  GN+  + KL+ ++
Sbjct: 90  SGRLKARGNIMLSQKLQMIL 109

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 2e-19
 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 6/129 (4%)

Query: 1   MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV 60
           M+      G   FITG   G+GK +    +  GA  VIA++  +           A +  
Sbjct: 17  MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKAT------AEQIS 70

Query: 61  EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
              G        D+RD   VQ+ V+  +   G  +I++NNA+   ++ T       +  +
Sbjct: 71  SQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTI 130

Query: 121 NQINARGTY 129
             I   GT 
Sbjct: 131 TDIVLNGTA 139

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 84.1 bits (207), Expect = 4e-19
 Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 6   KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
           K +G    +TGA   IG A AL+ A++G  I +     E   K       A   V + G 
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEK-------AEASVREKGV 54

Query: 66  NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
                + D+  E AV   V++ V  FG ID L NNA
Sbjct: 55  EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA 90

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 83.6 bits (206), Expect = 5e-19
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
                +TGA+ GIG  IA +  K+G  + + A+  E        + +  KE+ +AG    
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG-------LRTTLKELREAGVEAD 54

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
               D+R    +++ V A V+++G +D+LVNNA       TA    + +  + + N  G 
Sbjct: 55  GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGV 114

Query: 129 YL 130
           + 
Sbjct: 115 FR 116

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.6 bits (198), Expect = 7e-18
 Identities = 42/316 (13%), Positives = 88/316 (27%), Gaps = 81/316 (25%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAK---DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA 63
           L      +TGASRG G+A+A + A+    G+ ++++A                       
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSA----------------------- 40

Query: 64  GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 123
                      R E  ++        +   + +++  A                DL    
Sbjct: 41  -----------RSESMLRQLKEELGAQQPDLKVVLAAA----------------DLGT-- 71

Query: 124 NARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNA---SAISLTDTANTPLKKYDLMN 180
                   +A     + +       +     +L+NNA     +S        L + +   
Sbjct: 72  --------EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
            +N      ++   L   + S       ++         +K    Y   K    M    +
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVL 183

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----------KPEIMADAA 289
           A E    ++ V +  P   +     ++    S D +  S+                A   
Sbjct: 184 AAE--EPSVRVLSYAP-GPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 290 YYILSSNPPSLTGQFL 305
             +L  +    +G  +
Sbjct: 241 LGLLQKD-TFQSGAHV 255

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 77.8 bits (191), Expect = 4e-17
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 18/118 (15%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
               ++ +TG +RGIG AIA + A DG  + +  +                     A   
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG------------------SGAPKG 46

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
                VD+ D  AV  A  A  +  G +++LV+NA   +         +K++ +   N
Sbjct: 47  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINAN 104

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 61.7 bits (149), Expect = 2e-11
 Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 7/176 (3%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
            +  A  A  +  G +++LV+NA   +         +K++ +   N  G + V+Q+    
Sbjct: 59  AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS 118

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP- 256
           ++++    ++ I     L          Y  SK G+   A  +A E    N+  N + P 
Sbjct: 119 MQRNKFGRMIFIGSVSGLWGIGN--QANYAASKAGVIGMARSIARELSKANVTANVVAPG 176

Query: 257 --RTAIYTAAIEMLTGGSADAKATSR--KPEIMADAAYYILSSNPPSLTGQFLIDD 308
              T +  A  E +  G+       R   P  +A    ++ S +   ++G  +  D
Sbjct: 177 YIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVD 232

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 78.6 bits (192), Expect = 5e-17
 Identities = 47/311 (15%), Positives = 91/311 (29%), Gaps = 57/311 (18%)

Query: 14  ITGASRGIGKAIALKAAKDGANIVI------------AAKTAEPHPKLPGTIYSAAKEVE 61
           +TGA++ +G++IA     +G  + +            +A      P    T+ +    V 
Sbjct: 7   VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 66

Query: 62  DAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 121
            A  +       +         V A    +G  D+LVNNAS+   T         ++   
Sbjct: 67  TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 126

Query: 122 QINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 181
                                                        +TA   L   + +  
Sbjct: 127 GDR---------------------------------------EAMETATADLFGSNAIAP 147

Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA 241
                 +       P   +  +  I+N+   +   P     +  YT++K  +       A
Sbjct: 148 YFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG--YTIYTMAKGALEGLTRSAA 205

Query: 242 EEFKGDNIAVNALWPRTAIYTAAI--EMLTGGSADAKATSR--KPEIMADAAYYILSSNP 297
            E     I VN + P  ++    +   +  G  +      R      ++D   ++ SS  
Sbjct: 206 LELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 265

Query: 298 PSLTGQFLIDD 308
             +TG  +  D
Sbjct: 266 KYITGTCVKVD 276

>d1pz4a_ d.106.1.1 (A:) Sterol carrier protein 2 (SCP2) {Yellow fever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: Sterol carrier protein 2 (SCP2)
species: Yellow fever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 74.2 bits (182), Expect = 5e-17
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 320 QYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFM 379
           ++     G    +W +DLK               +ATLTM +    A+  G L    A  
Sbjct: 34  KFRITQGGKVVKNWVMDLKNVKLVESDDAA----EATLTMEDDIMFAIGTGALPAKEAMA 89

Query: 380 TGKLKISGNLQKAMKLEKLMGALK 403
             K+++ G ++    LE  + +LK
Sbjct: 90  QDKMEVDGQVELIFLLEPFIASLK 113

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 77.0 bits (189), Expect = 8e-17
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 22/123 (17%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           +    + +  ASRGIG+A+A   +++GA + I A+  E               ++ +G  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE--------------LLKRSGHR 47

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
            + C  D+R +      ++   +K   +DILV NA             + +         
Sbjct: 48  YVVC--DLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFL 99

Query: 127 GTY 129
              
Sbjct: 100 NMI 102

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 68.2 bits (166), Expect = 9e-14
 Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 10/177 (5%)

Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
           ++  ++   +K   +DILV NA             + +             + +  LP +
Sbjct: 53  LRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAM 112

Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
           K+     I+ I+    ++P           ++  ++     ++ E     I VN + P  
Sbjct: 113 KEKGWGRIVAITSFSVISPIENLYTSNS--ARMALTGFLKTLSFEVAPYGITVNCVAP-G 169

Query: 259 AIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
              T  ++ L       +  S+       KPE +A    ++ S     LTGQ ++ D
Sbjct: 170 WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVD 226

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 2e-16
 Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 13/155 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L G  + +TGAS+GIG+ +A   AK GA++V+ A++ E   K+       +  +E    +
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKV------VSHCLELGAAS 65

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
                  + D    +  V  A    GG+D+L+ N    +  +  +  +       ++N  
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFL 125

Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
              ++         +A+       G I ++ + A 
Sbjct: 126 SYVVL-------TVAALPMLKQSNGSIVVVSSLAG 153

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 4e-13
 Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 20/185 (10%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
             +  V  A    GG+D+L+ N    +  +  +  +       ++N     +++   LP 
Sbjct: 78  FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM 137

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF--KGDNIAVNALW 255
           LK+ ++  I+ +S       +      AY+ SK+ +      + +E+     N+++    
Sbjct: 138 LKQ-SNGSIVVVSSLAGKVAYP--MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 194

Query: 256 P---RTAIYTAAIE---MLTGGSADAKAT-------SRKPEIMADAAYYI--LSSNPPSL 300
                T     A+     +     +  A         R+ E+  D++ +   L  NP   
Sbjct: 195 LGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRK 254

Query: 301 TGQFL 305
             +FL
Sbjct: 255 ILEFL 259

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 75.5 bits (185), Expect = 4e-16
 Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 15/126 (11%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           L+   +    A  GIG   + +  K      +     E    L      A  +  +   N
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL------AELKAINPKVN 56

Query: 67  CLPCIVDI-RDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
                 D+       +  +    D+   +DIL+N A  +             +    IN 
Sbjct: 57  ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQ--------IERTIAINF 108

Query: 126 RGTYLV 131
            G    
Sbjct: 109 TGLVNT 114

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 67.8 bits (165), Expect = 2e-13
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 23/181 (12%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           E +  +    D+   +DIL+N A  +             +    IN  G    +   L +
Sbjct: 70  ESKKLLKKIFDQLKTVDILINGAGILDDHQ--------IERTIAINFTGLVNTTTAILDF 121

Query: 198 LKKSNHAH---ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
             K        I NI      N         Y+ SK  +      +A+      +   ++
Sbjct: 122 WDKRKGGPGGIIANICSVTGFNAIH--QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSI 179

Query: 255 WP---RTAIYTAAIEMLTGGSADAKATSRK----PEIMADAAYYILSSNPPSLTGQFLID 307
            P   RT +       L      A+          E         + +   +  G     
Sbjct: 180 NPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA---NKNGAIWKL 236

Query: 308 D 308
           D
Sbjct: 237 D 237

>d2cfua1 d.106.1.3 (A:530-655) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 126

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Alkylsulfatase C-terminal domain-like
domain: Alkylsulfatase SdsA1
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 70.7 bits (173), Expect = 1e-15
 Identities = 15/70 (21%), Positives = 30/70 (42%)

Query: 330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNL 389
             ++ ++LK    ++ RG  S     T+++   +   L   ++        GKLK SGN 
Sbjct: 42  GENYLLELKNSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKLKSSGNP 101

Query: 390 QKAMKLEKLM 399
               +L  ++
Sbjct: 102 LLLGQLFGML 111

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 71.2 bits (174), Expect = 9e-15
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 7  LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
                 +TGA RGIG+ IA   AK  ++++  ++T +    +         E++  G  
Sbjct: 8  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV-------VDEIKSFGYE 60

Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGI 94
                D+  +  +   +N  + +   +
Sbjct: 61 SSGYAGDVSKKEEISEVINKILTEHKNV 88

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 61.6 bits (149), Expect = 2e-11
 Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 15/180 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
           EI   +N  + +   +DILVNNA              +++ + + N    + ++Q     
Sbjct: 73  EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 132

Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
           +  + +  I+NIS  + L          Y+ SK G+      +A+E    NI VNA+ P 
Sbjct: 133 MINNRYGRIINISSIVGLTGNV--GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAP- 189

Query: 258 TAIYTAAIEMLTGGSADAKATSRK---------PEIMADAAYYILSSNPPSLTGQFLIDD 308
             I +   +M    S   K              PE +A+ A ++ S     + G+  + D
Sbjct: 190 GFISS---DMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVID 246

>d1wfra_ d.106.1.1 (A:) Hypothetical protein TT1886 (TTHA0401) {Thermus thermophilus [TaxId: 274]} Length = 143

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: Hypothetical protein TT1886 (TTHA0401)
species: Thermus thermophilus [TaxId: 274]

 Score = 68.0 bits (166), Expect = 2e-14
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 332 SWHIDLKTGSGSSGRGKPS-STVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS-GNL 389
           +  +DL  G+    +     +  D  +      +  + EG+L+P SA M G L++  G +
Sbjct: 57  AVVLDLWHGACRGAKAVEGEAEADFVIEADLATWQEVLEGRLEPLSALMRGLLELKKGTI 116

Query: 390 QKAMKLEKLMGAL 402
                  +    L
Sbjct: 117 AALAPYAQAAQEL 129

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 68.7 bits (167), Expect = 7e-14
 Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 14/131 (10%)

Query: 7   LSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           LSG    + G +  R +G AIA K  + GA + ++ +     P         A+++ +A 
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP--------EAEKLAEAL 57

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLT----DTANTPLKKYDLM 120
           G  L    D+  +  + +      + FGG+D LV+  +            +T  + + L 
Sbjct: 58  GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 121 NQINARGTYLV 131
            +++A     V
Sbjct: 118 LEVSAYSLVAV 128

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 58.3 bits (140), Expect = 3e-10
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 15/182 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLT----DTANTPLKKYDLMNQINARGTYLVSQK 193
           E+ +      + FGG+D LV+  +            +T  + + L  +++A     V+++
Sbjct: 72  ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARR 131

Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
             P L++     I+ ++   +        +    I+K  +      +A E     + VNA
Sbjct: 132 AEPLLREG--GGIVTLTYYASEKVVP--KYNVMAIAKAALEASVRYLAYELGPKGVRVNA 187

Query: 254 LWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLI 306
           +        AA  +        +             E + +   ++LS     +TG+ + 
Sbjct: 188 ISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVY 247

Query: 307 DD 308
            D
Sbjct: 248 VD 249

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.3 bits (166), Expect = 8e-14
 Identities = 16/185 (8%), Positives = 41/185 (22%), Gaps = 24/185 (12%)

Query: 9   GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL 68
              + + G    +G             +                        E +    +
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE---------------EASASVIV 46

Query: 69  PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA-NTPLKKYDLMNQINARG 127
                  ++    +A    +     +D ++  A   +  +    +  K  DLM + +   
Sbjct: 47  KMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWT 106

Query: 128 TYLVKASQGLEIQ--------SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 179
           + +        ++         A  A     G I   +   +   L  +           
Sbjct: 107 STISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG 166

Query: 180 NQINA 184
               A
Sbjct: 167 AAAIA 171

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 1e-07
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 14/174 (8%)

Query: 138 EIQSAVNAAVDKFGG--IDILVNNASAISLTDTA-NTPLKKYDLMNQINARGTYLVSQKC 194
           +            G   +D ++  A   +  +    +  K  DLM + +   + + S   
Sbjct: 55  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS--H 112

Query: 195 LPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG--DNIAVN 252
           L          +        L+       + Y ++K  +      +A +  G     A  
Sbjct: 113 LATKHLKEGGLLTLAGAKAALDGTP--GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 170

Query: 253 ALWPRTAIYTAAIEMLTGGSADAKATSR-KPEIMADAAYYILSSNPPSLTGQFL 305
           A+ P   + T    M      +A  +S    E + +  +  ++ N    +G  +
Sbjct: 171 AVLP-VTLDT---PMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLI 220

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 67.5 bits (164), Expect = 2e-13
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 10/118 (8%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
             G    +TGASRGIG+AIA   A  GA ++  A +             A    +  G N
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENG----------AQAISDYLGAN 51

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
               ++++ D  +++S +     +FG +DILVNNA             ++++ + + N
Sbjct: 52  GKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETN 109

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 60.9 bits (147), Expect = 2e-11
 Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 147 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHI 206
             +FG +DILVNNA             ++++ + + N    + +S+  +  + K  H  I
Sbjct: 73  RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRI 132

Query: 207 LNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIE 266
           + I   +            Y  +K G+   +  +A E     I VN + P          
Sbjct: 133 ITIGSVVGTMGNG--GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA 190

Query: 267 MLTGGSADAKATSR-----KPEIMADAAYYILSSNPPSLTGQFLIDD 308
           +     A   A          + +A+A  ++ S     +TG+ L  +
Sbjct: 191 LSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVN 237

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 3e-13
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 24/161 (14%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G+L G  I +T A++GIG+A AL  A++GA ++                    +E+E   
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINES-----------KLQELEKYP 50

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
           G     I     +   +  ++   ++   +D+L N A  +      +   K +D    +N
Sbjct: 51  G-----IQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLN 105

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKF-GGIDILVNNASAIS 164
            R  YL+       I++ +   + +  G I  + + AS++ 
Sbjct: 106 VRSMYLM-------IKAFLPKMLAQKSGNIINMSSVASSVK 139

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 9e-12
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
           +D+L N A  +      +   K +D    +N R  YL+ +  LP +      +I+N+S  
Sbjct: 75  LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV 134

Query: 213 LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTAAIEMLT 269
            +       N   Y+ +K  +      +A +F    I  N + P    T      I+   
Sbjct: 135 ASSVKGVV-NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG 193

Query: 270 GGSADAKATSRK--------PEIMADAAYYILSSNPPSLTGQFLIDD 308
                     ++         E +A    Y+ S     +TG  +I D
Sbjct: 194 NPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIID 240

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.7 bits (162), Expect = 3e-13
 Identities = 46/305 (15%), Positives = 86/305 (28%), Gaps = 81/305 (26%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           +  +TG + G+G+A AL     G  +V+     E                   G + +  
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------------GEDLIYV 43

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
             D+  E  V+ AV  A ++     ++      ++            +   ++       
Sbjct: 44  EGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRV------- 96

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 190
                                   + VN     ++   A   +++               
Sbjct: 97  ------------------------LEVNLLGTFNVLRLAAWAMRENPPD----------- 121

Query: 191 SQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
                    +     I+N +              AY  SK G+    L  A E  G  I 
Sbjct: 122 --------AEGQRGVIVNTASVAAFEG--QIGQAAYAASKGGVVALTLPAARELAGWGIR 171

Query: 251 VNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQ 303
           V  + P     T  ++ L   +  + A          +PE  A    +IL +  P L G+
Sbjct: 172 VVTVAP-GLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGE 228

Query: 304 FLIDD 308
            +  D
Sbjct: 229 VVRLD 233

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 66.0 bits (160), Expect = 4e-13
 Identities = 20/186 (10%), Positives = 50/186 (26%), Gaps = 24/186 (12%)

Query: 8   SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
           S   + + G    +G AI     K+G  ++    +A                 +      
Sbjct: 1   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND---------------QADSNIL 45

Query: 68  LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNN-ASAISLTDTANTPLKKYDLMNQINAR 126
           +    +  ++        A+  +   +D +          + ++   +K  DLM + +  
Sbjct: 46  VDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVW 105

Query: 127 GTYLVKASQGLE--------IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 178
            + +                +  A  A       I   +  A+   LT +          
Sbjct: 106 SSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD 165

Query: 179 MNQINA 184
            + +  
Sbjct: 166 NSAVLT 171

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 64.3 bits (155), Expect = 3e-12
 Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 10/98 (10%)

Query: 5   GKLSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           G L G    I G +  + I   IA      GA +                     + +  
Sbjct: 1   GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE--------KRVRPIAQ 52

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNN 100
              +     +D+  E   +S  N+     G +D +V++
Sbjct: 53  ELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHS 90

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 64.8 bits (156), Expect = 3e-12
 Identities = 45/311 (14%), Positives = 89/311 (28%), Gaps = 43/311 (13%)

Query: 7   LSGLTIFITGAS--RGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           L G   FI G +   G G A+A   A  GA I++              I+  +       
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL------NIFETSLRRGKFD 59

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
            + +                   + K   +D + +N                       +
Sbjct: 60  QSRVLPD-----------GSLMEIKKVYPLDAVFDNP-----------------EDVPED 91

Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
            +       S    +Q A       FG IDILV++ +             +   +  I+A
Sbjct: 92  VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISA 151

Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF 244
                VS         +     ++++   +            +      S   +   E  
Sbjct: 152 SSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG 211

Query: 245 KGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNP 297
           +  NI VN +        AA  +    +    + +          + + +AA +++S   
Sbjct: 212 RKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLA 271

Query: 298 PSLTGQFLIDD 308
            ++TG  +  D
Sbjct: 272 SAITGATIYVD 282

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 61.9 bits (149), Expect = 2e-11
 Identities = 42/307 (13%), Positives = 81/307 (26%), Gaps = 75/307 (24%)

Query: 12  IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
           I I+G + GIG A        G  IV                                 I
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------------------I 39

Query: 72  VDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
            D+      + A+   + K    +D LV  A             K    +  +N  G   
Sbjct: 40  ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG-------LGPQTKVLGNVVSVNYFGAT- 91

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 190
                  E+  A   A+ K                                I++  +  +
Sbjct: 92  -------ELMDAFLPALKKGH------------------------QPAAVVISSVASAHL 120

Query: 191 SQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
           +    P                +         ++AY  SK  +++     A  +    + 
Sbjct: 121 AFDKNPLALALEAGEEAKARAIVEHAGEQG-GNLAYAGSKNALTVAVRKRAAAWGEAGVR 179

Query: 251 VNALWPRTAIYTAAIEMLTGGSADAKATSR---------KPEIMADAAYYILSSNPPSLT 301
           +N + P  A  T  ++         ++ ++         +P  MA    +++S     + 
Sbjct: 180 LNTIAP-GATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVH 238

Query: 302 GQFLIDD 308
           G  ++ D
Sbjct: 239 GAQIVID 245

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 60.3 bits (145), Expect = 5e-11
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 10/99 (10%)

Query: 5   GKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED 62
           G LSG  I +TG +    I   IA    ++GA +    +  +             +E   
Sbjct: 1   GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK--------GRVEEFAA 52

Query: 63  AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
             G+ +    D+ ++ ++ +        +   D  V++ 
Sbjct: 53  QLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSI 91

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 44.9 bits (105), Expect = 7e-06
 Identities = 23/183 (12%), Positives = 60/183 (32%), Gaps = 16/183 (8%)

Query: 138 EIQSAVNAAVDKFGGIDILVNNAS-----AISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
            I +        +   D  V++        +          + + + + I++     +++
Sbjct: 69  SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK 128

Query: 193 KCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
            C   L   +   +L +S           N+    ++K  +      MA     + + VN
Sbjct: 129 ACRSMLNPGSA--LLTLSYLGAERAIP--NYNVMGLAKASLEANVRYMANAMGPEGVRVN 184

Query: 253 ALWP---RTAIYTAAIEMLTGGSADAKATSRK----PEIMADAAYYILSSNPPSLTGQFL 305
           A+     RT   +   +     +     T  +     E + ++A ++ S     ++G+ +
Sbjct: 185 AISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVV 244

Query: 306 IDD 308
             D
Sbjct: 245 HVD 247

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 7e-11
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
          + ITG S GIG  +A++ A D +       T     K  G ++ AA+ +    G+     
Sbjct: 5  VLITGCSSGIGLHLAVRLASDPSQSFKVYATLR-DLKTQGRLWEAARALACPPGSLETLQ 63

Query: 72 VDIRDEHAVQSA 83
          +D+RD  +V +A
Sbjct: 64 LDVRDSKSVAAA 75

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 4e-09
 Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 29/171 (16%)

Query: 179 MNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL 238
           +  +N  GT  + Q  LP +K+     +L       L       +  Y  SK+ +     
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP--FNDVYCASKFALEGLCE 167

Query: 239 GMAEEFKGDNIAVNALWP---RTAI---------------YTAAIEMLTGGSADAKATSR 280
            +A       + ++ +      TA                            A +K   R
Sbjct: 168 SLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR 227

Query: 281 K----PEIMADAAYYILSSNPPSL---TGQFLIDDEVLKAQHIDLEQYSYV 324
           +    PE +A+     L +  P+L   T +  +   +L+ +  D    +YV
Sbjct: 228 EAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLP--LLRMRLDDPSGSNYV 276

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 1e-10
 Identities = 57/312 (18%), Positives = 95/312 (30%), Gaps = 81/312 (25%)

Query: 7   LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
           + GL   ITG + G+G A A +    GA+ V+                    + +  G N
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS----------GGEAQAKKLGNN 52

Query: 67  CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNN------ASAISLTDTANTPLKKYDLM 120
           C+    D+  E  VQ+A+  A  KFG +D+ VN       +   +L       L+ +  +
Sbjct: 53  CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV 112

Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
             +N  GT+ V   + +  +   N          I +N AS  +                
Sbjct: 113 LDVNLMGTFNV--IRLVAGEMGQNEPDQGGQRGVI-INTASVAAFEGQVG---------- 159

Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
                                                       AY+ SK G+    L +
Sbjct: 160 ------------------------------------------QAAYSASKGGIVGMTLPI 177

Query: 241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYIL 293
           A +     I V  + P     T  +  L     +  A+          P   A     I+
Sbjct: 178 ARDLAPIGIRVMTIAP-GLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII 236

Query: 294 SSNPPSLTGQFL 305
            +  P L G+ +
Sbjct: 237 EN--PFLNGEVI 246

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 57.0 bits (136), Expect = 6e-10
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 11  TIFITGASRGIGKAIA---LKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
           +I ITG +RG+G  +    L   +   ++    +  E   +L        +++     N 
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL--------EDLAKNHSNI 55

Query: 68  LPCIVDIRDEHAVQSAVNA--AVDKFGGIDILVNN 100
               +D+R+  A    V     V K  G+++L NN
Sbjct: 56  HILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNN 90

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 48.6 bits (114), Expect = 4e-07
 Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 29/175 (16%)

Query: 147 VDKFGGIDILVNNASAISLT-DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
           V K  G+++L NNA     +        ++     Q N     ++++ CLP LKK+  A+
Sbjct: 78  VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKAN 137

Query: 206 ILNISPPLNLNPFWFK------------NHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
                                          AY  SK  ++     ++ +     I   +
Sbjct: 138 ESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVS 197

Query: 254 LWP---RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
           L P   +T +  ++  +    S            +       +S       G F+
Sbjct: 198 LHPGWVKTDMGGSSAPLDVPTSTGQ---------IVQT----ISKLGEKQNGGFV 239

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 55.9 bits (133), Expect = 2e-09
 Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 12/71 (16%)

Query: 4  TGKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE 61
          TG L G  I ++G      I   IA  A + GA +V+                   + + 
Sbjct: 1  TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL----------RLIQRIT 50

Query: 62 DAGGNCLPCIV 72
          D      P + 
Sbjct: 51 DRLPAKAPLLE 61

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 53.8 bits (127), Expect = 1e-08
 Identities = 37/314 (11%), Positives = 86/314 (27%), Gaps = 43/314 (13%)

Query: 13  FITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
           FI G   + G G  IA + +K    I+                                 
Sbjct: 6   FIAGIGDTNGYGWGIAKELSKRNVKIIFG----------------------IWPPVYNIF 43

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
           + + ++       +     K   +D+L  +AS                       +    
Sbjct: 44  MKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFD------------TANDIDEETKNNKR 91

Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNA--SAISLTDTANTPLKKYDLMNQINARGTY 188
               Q   I+   N    K+G I++LV++   +     D  NT  K Y      ++    
Sbjct: 92  YNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLI 151

Query: 189 LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF-KGD 247
            + +  +  +K  +    L                   + +K  +      +A    +  
Sbjct: 152 SLCKYFVNIMKPQSSIISLTYHAS---QKVVPGYGGGMSSAKAALESDTRVLAYHLGRNY 208

Query: 248 NIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID 307
           NI +N +     + + A   +   +   +  + + +       + + +N      + +  
Sbjct: 209 NIRINTISAG-PLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISA 267

Query: 308 DEVLKAQHIDLEQY 321
            +        +E  
Sbjct: 268 SQNYTFIDYAIEYS 281

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 51.2 bits (121), Expect = 7e-08
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 11 TIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLP 69
          T+ +TG + G+G  IA   A+ GA ++++ +++                E+E  G     
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAG----ELVAELEALGARTTV 66

Query: 70 CIVDIRDEHAVQ 81
             D+ D  +V+
Sbjct: 67 AACDVTDRESVR 78

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 49.3 bits (116), Expect = 2e-07
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 7/90 (7%)

Query: 11  TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
            + + G +  +GK +AL+ A  G  IV+ ++  E          + A E     G+    
Sbjct: 2   RVALLGGTGNLGKGLALRLATLGHEIVVGSRREE-------KAEAKAAEYRRIAGDASIT 54

Query: 71  IVDIRDEHAVQSAVNAAVDKFGGIDILVNN 100
            +   D           +     ID   + 
Sbjct: 55  GMKNEDAAEACDIAVLTIPWEHAIDTARDL 84

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 15/145 (10%), Positives = 38/145 (26%), Gaps = 17/145 (11%)

Query: 5   GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
           G + G    +   +  +G   A   A +GA +V+  +  +       ++        +  
Sbjct: 19  GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV--------NKR 70

Query: 65  GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASA--ISLTDTANTPLKKYDLMNQ 122
                   +  D+ +   A         G   +    +     L   A       +++  
Sbjct: 71  FKVNVTAAETADDASRAEA-------VKGAHFVFTAGAIGLELLPQAAWQNESSIEIVAD 123

Query: 123 INARGTYLVKASQGLEIQSAVNAAV 147
            NA+    +      +         
Sbjct: 124 YNAQPPLGIGGIDATDKGKEYGGKR 148

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	406
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1c44a_	123	Sterol carrier protein 2 (SCP2) {Rabbit (Oryctolag	99.82
d1ikta_	115	SCP2-like domain of MFE-2 {Human (Homo sapiens) [T	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.75
d1pz4a_	113	Sterol carrier protein 2 (SCP2) {Yellow fever mosq	99.62
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.6
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.55
d1wfra_	143	Hypothetical protein TT1886 (TTHA0401) {Thermus th	99.54
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.51
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.5
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.48
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.43
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.39
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.39
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.39
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.38
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.38
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.37
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.37
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.36
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.34
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.31
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.3
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.28
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.28
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.26
d2cfua1	126	Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI	99.23
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.21
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.19
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.12
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.05
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.84
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.83
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.8
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.79
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.65
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.4
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.65
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.64
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.55
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.5
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.49
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.42
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.41
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.37
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.33
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.27
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.26
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.22
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.12
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.05
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.88
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.88
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.85
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.83
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.75
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.7
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.57
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.55
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.41
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.36
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.33
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.3
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.28
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.26
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.25
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.24
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.15
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.14
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.02
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.97
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.96
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.89
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.86
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.84
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.83
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.79
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	95.7
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.56
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.55
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.52
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.38
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	95.38
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.36
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.35
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.34
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.27
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	95.26
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.16
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.12
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	95.07
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.05
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	95.01
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	94.99
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.95
d2hv2a1	111	Hypothetical protein EF1021 {Enterococcus faecalis	94.92
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	94.91
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.9
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	94.89
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.87
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	94.84
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.71
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	94.67
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	94.48
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	94.45
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	94.28
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	94.24
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	94.15
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.03
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.01
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	93.9
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.78
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	93.78
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	93.77
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	93.75
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.67
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	93.58
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	93.55
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.54
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	93.45
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.39
d2ozga1	105	Putative acetyltransferase Ava4977 {Anabaena varia	93.33
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	93.31
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	93.31
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	93.3
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.28
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.23
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	93.19
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	93.15
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.15
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	93.11
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.08
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.06
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.92
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	92.92
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	92.9
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.81
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.77
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.59
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	92.59
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	92.53
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	92.53
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	92.53
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	92.52
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.41
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.35
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.32
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	92.31
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	92.14
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	92.05
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	91.97
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.92
d2i00a1	106	Putative acetyltransferase EF2353 {Enterococcus fa	91.88
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.79
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.76
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	91.65
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	91.46
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.3
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.17
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.95
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	90.93
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	90.92
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.91
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.83
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	90.81
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	90.73
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	90.64
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	90.58
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.55
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.48
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.22
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.16
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	90.02
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.99
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	89.99
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	89.98
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	89.91
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.63
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	89.6
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.56
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.12
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	89.11
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.04
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	88.95
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	88.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.66
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.56
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	88.3
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	87.78
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.71
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.5
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	87.43
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	87.35
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	87.33
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.1
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.67
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	86.17
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	85.98
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	85.54
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	85.54
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	85.53
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	84.75
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	84.73
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	84.41
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	84.39
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	84.38
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	84.37
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	84.26
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.11
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.97
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	83.97
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.77
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	83.77
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.73
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	83.65
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	83.6
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	83.58
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.56
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	83.39
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	83.2
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	83.11
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	82.77
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	82.75
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	82.71
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	82.18
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	81.8
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.19
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	80.93
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	80.85
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	80.81
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	80.31
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	80.27
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	80.27
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	80.22
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	80.19

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.8e-53  Score=393.05  Aligned_cols=235  Identities=26%  Similarity=0.370  Sum_probs=204.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++         .....++..+.++.++.+|++|+++++++++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~---------~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~   72 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP---------EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGK   72 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH---------HHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH---------HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHH
Confidence            6999999999999999999999999999999999998652         3455677788999999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.++||+||+||||||+....++                                                        
T Consensus        73 ~~~~~~G~iDilVnnAG~~~~~~~--------------------------------------------------------   96 (247)
T d2ew8a1          73 QVISTFGRCDILVNNAGIYPLIPF--------------------------------------------------------   96 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCG--------------------------------------------------------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCh--------------------------------------------------------
Confidence            999999999999999998755443                                                        


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+++.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|++
T Consensus        97 ---~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~ela  171 (247)
T d2ew8a1          97 ---DELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK--IEAYTHYISTKAANIGFTRALASDLG  171 (247)
T ss_dssp             ---GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC--CSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---HhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc--CcccccchhhhccHHHHHHHHHHHhc
Confidence               3899999999999999999999999999999999999999999999877  47899999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++|||||+|+||+ +.|++.+.....        ...+.+|+.+|||||++++||+|+.++|+||+.| +|||++
T Consensus       172 ~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         172 KDGITVNAIAPSL-VRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             GGTEEEEEEEECC-C------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             ccCeEEEEEeeCC-CCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCEe
Confidence            9999999999996 677665443221        1125667889999999999999999999999999 788764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.6e-52  Score=390.74  Aligned_cols=242  Identities=24%  Similarity=0.346  Sum_probs=216.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++...+.++.++.+|++++++++++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   75 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-------LNDCLTQWRSKGFKVEASVCDLSSRSERQEL   75 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCceEEEeeCCCHHHHHHH
Confidence            457999999999999999999999999999999999998765       5567888888899999999999999999999


Q ss_pred             HHHHHHhcC-CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          84 VNAAVDKFG-GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        84 ~~~i~~~~g-~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ++++.++++ ++|+||||||+....++.                                                    
T Consensus        76 ~~~~~~~~~~~idilvnnAG~~~~~~~~----------------------------------------------------  103 (259)
T d2ae2a_          76 MNTVANHFHGKLNILVNNAGIVIYKEAK----------------------------------------------------  103 (259)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHhCCCceEEEECCceeccCccc----------------------------------------------------
Confidence            999999987 799999999987654433                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++..|++||+|+.+|+|+||.
T Consensus       104 -------~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~  174 (259)
T d2ae2a_         104 -------DYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA--VPYEAVYGATKGAMDQLTRCLAF  174 (259)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc--cccccchHHHHHHHHHHHHHHHH
Confidence                   899999999999999999999999999999999999999999999877  47899999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||+++|||||+|+||+ +.|++.+......           ..|..|+.+|+|||++++||+|+.++|+||+.| +|||+
T Consensus       175 el~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         175 EWAKDNIRVNGVGPGV-IATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             HTGGGTEEEEEEEECS-BCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HhCcCceEEEEeeeCc-ccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence            9999999999999996 6777766554321           135678889999999999999999999999999 88887


Q ss_pred             HHHh
Q psy6113         311 LKAQ  314 (406)
Q Consensus       311 ~~~~  314 (406)
                      +...
T Consensus       254 ~a~~  257 (259)
T d2ae2a_         254 MANC  257 (259)
T ss_dssp             GGCS
T ss_pred             EeeC
Confidence            6533

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.5e-53  Score=393.35  Aligned_cols=239  Identities=22%  Similarity=0.281  Sum_probs=211.9

Q ss_pred             CCcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           3 NTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +..+|+||+||||||++|||+++|++|+++|++|++++|+.++       ++++.+++++.+.++.++.+|+++++++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~-------l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~   76 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKS-------CDSVVDEIKSFGYESSGYAGDVSKKEEISE   76 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHH-------HHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            4678999999999999999999999999999999999998765       456788888889999999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.++||+||+||||||+....+..                                                    
T Consensus        77 ~~~~~~~~~g~iDilvnnag~~~~~~~~----------------------------------------------------  104 (251)
T d2c07a1          77 VINKILTEHKNVDILVNNAGITRDNLFL----------------------------------------------------  104 (251)
T ss_dssp             HHHHHHHHCSCCCEEEECCCCCCCCCTT----------------------------------------------------
T ss_pred             HHHHHHHhcCCceeeeeccccccccccc----------------------------------------------------
Confidence            9999999999999999999987655544                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.++|+++|+++|+|++++.|+|||+||..+..+  .++..+|++||+|+.+|+|+||.
T Consensus       105 -------~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~--~~~~~~Y~asKaal~~ltr~lA~  175 (251)
T d2c07a1         105 -------RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG--NVGQANYSSSKAGVIGFTKSLAK  175 (251)
T ss_dssp             -------TCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH
Confidence                   889999999999999999999999999999999999999999999876  47899999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||+++|||||+|+||+ +.|++.+...+.      ...|..|+.+|+|+|++++||+|+.++|+||+.| +|||+
T Consensus       176 el~~~gIrVN~V~PG~-v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         176 ELASRNITVNAIAPGF-ISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HHGGGTEEEEEEEECS-BCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HhhhhCeEEEEEccCC-EecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence            9999999999999996 677665443211      1236778899999999999999999999999999 77775

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-52  Score=389.48  Aligned_cols=241  Identities=29%  Similarity=0.410  Sum_probs=214.7

Q ss_pred             CCC--CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChH
Q psy6113           1 MIN--TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH   78 (406)
Q Consensus         1 ~~~--~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~   78 (406)
                      |.+  .++|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++++.+.++.++++|+++++
T Consensus         1 m~~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------~~~~~~~l~~~g~~~~~~~~Dvs~~~   73 (255)
T d1fmca_           1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA-------ANHVVDEIQQLGGQAFACRCDITSEQ   73 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             CCCCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHHcCCcEEEEEccCCCHH
Confidence            555  356899999999999999999999999999999999998765       55678888888999999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.++||+||+||||||+....+ .                                                
T Consensus        74 ~~~~~~~~~~~~~g~iDilvnnAG~~~~~~-~------------------------------------------------  104 (255)
T d1fmca_          74 ELSALADFAISKLGKVDILVNNAGGGGPKP-F------------------------------------------------  104 (255)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCCCCC-T------------------------------------------------
T ss_pred             HHHHHHHHHHHHcCCCCEeeeCCcCCCCCc-c------------------------------------------------
Confidence            999999999999999999999999764432 2                                                


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                                 +.+.++|++++++|+.++|+++|+++|+|+++++|+||++||..+..+  .+++++|++||+|+.+|+|
T Consensus       105 -----------e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~  171 (255)
T d1fmca_         105 -----------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK--NINMTSYASSKAAASHLVR  171 (255)
T ss_dssp             -----------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHH
T ss_pred             -----------cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc--ccccccchhHHHHHHHHHH
Confidence                       688999999999999999999999999999999999999999999887  4889999999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      +||.|++++|||||+|+||+ +.|++.+.....+       ..|..|+.+|+|||++++||+|+.++|+||+.| +|||+
T Consensus       172 ~lA~el~~~gIrVN~I~PG~-i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         172 NMAFDLGEKNIRVNGIAPGA-ILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHHHHHHTTTEEEEEEEECS-BCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHhCccCeEEEEeeeCc-CcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            99999999999999999996 6676655433211       235678889999999999999999999999999 88876


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      +
T Consensus       251 ~  251 (255)
T d1fmca_         251 V  251 (255)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.4e-52  Score=387.13  Aligned_cols=236  Identities=22%  Similarity=0.346  Sum_probs=209.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.   ++.+.++.++++|++|++++++++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~-------~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~   71 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEE-------GKAMA---AELADAARYVHLDVTQPAQWKAAV   71 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHH---HHTGGGEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHH---HHhhCcceEEEeecCCHHHHHHHH
Confidence            68999999999999999999999999999999999998754       22333   334567889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|+||+||||||+....++.                                                      
T Consensus        72 ~~~~~~~g~idilinnAG~~~~~~~~------------------------------------------------------   97 (244)
T d1nffa_          72 DTAVTAFGGLHVLVNNAGILNIGTIE------------------------------------------------------   97 (244)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTT------------------------------------------------------
T ss_pred             HHHHHHhCCCeEEEECCcccCCCchh------------------------------------------------------
Confidence            99999999999999999987654443                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +++.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|++|.||
T Consensus        98 -----~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~el  170 (244)
T d1nffa_          98 -----DYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG--TVACHGYTATKFAVRGLTKSTALEL  170 (244)
T ss_dssp             -----TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc--cccccchhhHHHHHHHHHHHHHHHh
Confidence                 899999999999999999999999999999999999999999999877  4789999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC-CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG-SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~-~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~  312 (406)
                      +++|||||+|+||+ ++|++.+..... ...|..|+.+|+|+|++++||+|+.++|+|||.+ +|||++.
T Consensus       171 ~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         171 GPSGIRVNSIHPGL-VKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             GGGTEEEEEEEECC-BCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccCEEEEEEeeCC-ccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCeec
Confidence            99999999999996 677666554332 2346778899999999999999999999999999 8888764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.3e-52  Score=387.74  Aligned_cols=238  Identities=26%  Similarity=0.377  Sum_probs=207.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++       +++.+++ +..+.++.++.+|+++++++++++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-------~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEA-------SEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            68999999999999999999999999999999999987653       3445554 455788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+....++                                                       
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~~~~~~-------------------------------------------------------   99 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGINRRHPA-------------------------------------------------------   99 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCG-------------------------------------------------------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCh-------------------------------------------------------
Confidence            9999999999999999998655443                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                          .+++.++|++++++|+.++|+++|+++|+|++++.|+||+++|..+.... .+++.+|++||+|+.+|+|+||.|+
T Consensus       100 ----~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~-~~~~~~Y~asKaal~~lt~~lA~e~  174 (251)
T d1vl8a_         100 ----EEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT-MPNISAYAASKGGVASLTKALAKEW  174 (251)
T ss_dssp             ----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC-SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc-CccccchHHHHHhHHHHHHHHHHHh
Confidence                38999999999999999999999999999999999999999997664422 4678999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+||+ +.|++.+......        ..|..|+.+|||||++++||+|+.++|+||+.| +|||++
T Consensus       175 ~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         175 GRYGIRVNVIAPGW-YRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             GGGTCEEEEEEECC-BCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccCeEEEEEeeCc-ccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            99999999999996 5666555433221        235678889999999999999999999999999 888775

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.8e-52  Score=387.82  Aligned_cols=239  Identities=23%  Similarity=0.368  Sum_probs=208.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++...  +.++.++++|++|+++++++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-------l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~   73 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEG-------LEASKAAVLETAPDAEVLTTVADVSDEAQVEAY   73 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHH
Confidence            6899999999999999999999999999999999998765       33455555443  55789999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.++||+||+||||||+..+..                                                       
T Consensus        74 ~~~~~~~~G~iDiLVnnAG~~~~~~-------------------------------------------------------   98 (258)
T d1iy8a_          74 VTATTERFGRIDGFFNNAGIEGKQN-------------------------------------------------------   98 (258)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCB-------------------------------------------------------
T ss_pred             HHHHHHHhCCCCEEEECCcccccCC-------------------------------------------------------
Confidence            9999999999999999999764322                                                       


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+++.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|
T Consensus        99 ---~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  173 (258)
T d1iy8a_          99 ---PTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG--IGNQSGYAAAKHGVVGLTRNSAVE  173 (258)
T ss_dssp             ---CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB--CSSBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---chhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC--CCCchHHHHHHHHHHHHHHHHHHH
Confidence               223889999999999999999999999999999999999999999999987  588999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhc----CCC----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eeh
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLT----GGS----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDD  308 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~----~~~----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~  308 (406)
                      ++++|||||+|+||+ +.|++.+...    ...          ..|..|+.+|+|+|++++||+|+.++|+||+.| +||
T Consensus       174 l~~~gIrVN~i~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         174 YGRYGIRINAIAPGA-IWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             HGGGTCEEEEEEECS-BCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hCccCceEEEEeeCc-ccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence            999999999999996 6666654331    111          125678889999999999999999999999999 888


Q ss_pred             hHHH
Q psy6113         309 EVLK  312 (406)
Q Consensus       309 g~~~  312 (406)
                      |++.
T Consensus       253 G~sa  256 (258)
T d1iy8a_         253 GQSA  256 (258)
T ss_dssp             TTTT
T ss_pred             chhc
Confidence            8764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.3e-52  Score=388.22  Aligned_cols=237  Identities=27%  Similarity=0.354  Sum_probs=204.2

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.      .++++.+++. ..+.++.++.+|++|+++++++++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~------~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   75 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA------EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH------HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHH------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            689999999999999999999999999999999998642      2334555554 357789999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.++||+||+||||||+....++.                                                       
T Consensus        76 ~~~~~~G~iDiLVnnAG~~~~~~~~-------------------------------------------------------  100 (260)
T d1x1ta1          76 NAVRQMGRIDILVNNAGIQHTALIE-------------------------------------------------------  100 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGG-------------------------------------------------------
T ss_pred             HHHHHhCCCcEEEeecccccCCchh-------------------------------------------------------
Confidence            9999999999999999987654433                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|++
T Consensus       101 ----~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~el~  174 (260)
T d1x1ta1         101 ----DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETA  174 (260)
T ss_dssp             ----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ----hhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec--cCCcchhhhhhhhHHHhHHHHHHHhc
Confidence                899999999999999999999999999999999999999999999987  48899999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCCC------------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-E
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGGS------------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-I  306 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~~------------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~  306 (406)
                      ++|||||+|+||+ +.|++.+......                  ..|..|+.+|+|+|++++||+|+.++|+||+.| +
T Consensus       175 ~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~v  253 (260)
T d1x1ta1         175 GQGITANAICPGW-VRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSV  253 (260)
T ss_dssp             TTTEEEEEEEECC-BCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhCcEEEEEecCC-CCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEE
Confidence            9999999999996 6776654332110                  124567889999999999999999999999999 8


Q ss_pred             ehhHH
Q psy6113         307 DDEVL  311 (406)
Q Consensus       307 d~g~~  311 (406)
                      |||++
T Consensus       254 DGG~t  258 (260)
T d1x1ta1         254 DGGWT  258 (260)
T ss_dssp             STTGG
T ss_pred             Ccchh
Confidence            88875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=7.2e-52  Score=384.57  Aligned_cols=235  Identities=27%  Similarity=0.344  Sum_probs=208.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.++          ..+..++.+.++.++++|+++++++++++
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   70 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE----------GAATARELGDAARYQHLDVTIEEDWQRVV   70 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHHHHHTTGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH----------HHHHHHHhCCceEEEEcccCCHHHHHHHH
Confidence            37999999999999999999999999999999999998753          23344455778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+....++.                                                      
T Consensus        71 ~~~~~~~g~iDilVnnAg~~~~~~~~------------------------------------------------------   96 (254)
T d1hdca_          71 AYAREEFGSVDGLVNNAGISTGMFLE------------------------------------------------------   96 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGG------------------------------------------------------
T ss_pred             HHHHHHcCCccEEEecCccccccccc------------------------------------------------------
Confidence            99999999999999999987654433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++++|++||+|+.+|+|+||.|+
T Consensus        97 -----~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e~  169 (254)
T d1hdca_          97 -----TESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG--LALTSSYGASKWGVRGLSKLAAVEL  169 (254)
T ss_dssp             -----GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc--ccchhhHHHHHHHHHHHHHHHHHHh
Confidence                 899999999999999999999999999999999999999999999887  4889999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC------cccccccC-ChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS------ADAKATSR-KPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~------~~~~~~~~-~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+||+ +.|++........      ..|..|+. +|+|||++++||+|+.++|+||+.+ +|||++
T Consensus       170 a~~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         170 GTDRIRVNSVHPGM-TYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             GGGTEEEEEEEECS-BCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCceEEEEeeeCc-ccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence            99999999999996 6777766554332      12455665 6999999999999999999999999 788775

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=5.3e-52  Score=387.31  Aligned_cols=239  Identities=26%  Similarity=0.399  Sum_probs=211.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.      .++++.+++++.+.++.++++|+++++++++++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~------~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~   76 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKED------EANSVLEEIKKVGGEAIAVKGDVTVESDVINLV   76 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            37999999999999999999999999999999999998653      245677888888999999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+..+.++.                                                      
T Consensus        77 ~~~~~~~G~iDiLVnnAG~~~~~~~~------------------------------------------------------  102 (261)
T d1geea_          77 QSAIKEFGKLDVMINNAGLENPVSSH------------------------------------------------------  102 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHhCCCCEeeccceecCCcchh------------------------------------------------------
Confidence            99999999999999999987654433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCC-eEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g-~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +++.++|++++++|+.++|+++|+++|+|++++.+ +||++||.++..+  .+++.+|++||+|+.+|+|+||.|
T Consensus       103 -----~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  175 (261)
T d1geea_         103 -----EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--WPLFVHYAASKGGMKLMTETLALE  175 (261)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc--CccccccccCCccchhhHHHHHHH
Confidence                 89999999999999999999999999999988755 5999999999877  588999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+++|||||+|+||+ +.|++.......        ...|..|+.+|||||++++||+|+.++|+||+.| +|||++
T Consensus       176 ~~~~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         176 YAPKGIRVNNIGPGA-INTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HGGGTCEEEEEEECS-BCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhhCcEEEEEeeCc-CcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCee
Confidence            999999999999996 556544332111        1236678899999999999999999999999999 788775

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.5e-52  Score=386.00  Aligned_cols=239  Identities=23%  Similarity=0.289  Sum_probs=192.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++...+.++.++.||++++++++++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~-------l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE-------LNECLSKWQKKGFQVTGSVCDASLRPEREKL   75 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCceEEEeccCCCHHHHHHH
Confidence            457899999999999999999999999999999999998765       4567788888888999999999999999999


Q ss_pred             HHHHHHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          84 VNAAVDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        84 ~~~i~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      ++++.++| |+||+||||||+....++.                                                    
T Consensus        76 ~~~~~~~~~g~idilvnnAG~~~~~~~~----------------------------------------------------  103 (259)
T d1xq1a_          76 MQTVSSMFGGKLDILINNLGAIRSKPTL----------------------------------------------------  103 (259)
T ss_dssp             HHHHHHHHTTCCSEEEEECCC------C----------------------------------------------------
T ss_pred             HHHHHHHhCCCcccccccccccCCCchh----------------------------------------------------
Confidence            99999998 6899999999987655443                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +++.++|++++++|+.|+|+++|+++|+|++++.|+||++||..+..+  .++..+|++||+|+.+|+|+||.
T Consensus       104 -------~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~  174 (259)
T d1xq1a_         104 -------DYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS--ASVGSIYSATKGALNQLARNLAC  174 (259)
T ss_dssp             -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             -------hCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc--ccccccccccccchhhhhHHHHH
Confidence                   899999999999999999999999999999999999999999999887  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC-------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS-------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |++++|||||+|+||+ ++|++.+......       ..|..|+.+|||||++++||+|+.++|+||+.| +|||++
T Consensus       175 e~~~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         175 EWASDGIRANAVAPAV-IATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  250 (259)
T ss_dssp             HHGGGTCEEEEEECCS-CC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HhcccCeEEEEeccCc-ccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence            9999999999999996 6777665443221       236677889999999999999999999999999 777654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.5e-51  Score=379.91  Aligned_cols=233  Identities=27%  Similarity=0.345  Sum_probs=202.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.        .+..   +..+  ..++++|++|++++++++
T Consensus         1 g~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~--------~~~~---~~~~--~~~~~~Dv~~~~~v~~~~   67 (248)
T d2d1ya1           1 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--------KEVA---EAIG--GAFFQVDLEDERERVRFV   67 (248)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--------HHHH---HHHT--CEEEECCTTCHHHHHHHH
T ss_pred             CccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--------HHHH---HHcC--CeEEEEeCCCHHHHHHHH
Confidence            36999999999999999999999999999999999998653        1222   2233  346789999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+..+.++.                                                      
T Consensus        68 ~~~~~~~G~iDiLVnnAG~~~~~~~~------------------------------------------------------   93 (248)
T d2d1ya1          68 EEAAYALGRVDVLVNNAAIAAPGSAL------------------------------------------------------   93 (248)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTT------------------------------------------------------
T ss_pred             HHHHHhcCCCCeEEEeCcCCCCCChh------------------------------------------------------
Confidence            99999999999999999987655443                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +++.++|++++++|+.|+|+++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|+
T Consensus        94 -----~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~el  166 (248)
T d2d1ya1          94 -----TVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA--EQENAAYNASKGGLVNLTRSLALDL  166 (248)
T ss_dssp             -----TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc--ccccchhHHHHHHHHHHHHHHHHHh
Confidence                 899999999999999999999999999999999999999999999987  4889999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+||+ +.|++........            ..|..|+.+|+|+|++++||+|+.++|+|||.| +|||++
T Consensus       167 ~~~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         167 APLRIRVNAVAPGA-IATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             GGGTEEEEEEEECS-BCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhCcEEEEEeeCC-CCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            99999999999996 6666554332110            125567889999999999999999999999999 888876


Q ss_pred             H
Q psy6113         312 K  312 (406)
Q Consensus       312 ~  312 (406)
                      .
T Consensus       246 a  246 (248)
T d2d1ya1         246 A  246 (248)
T ss_dssp             G
T ss_pred             c
Confidence            4

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-52  Score=386.76  Aligned_cols=233  Identities=23%  Similarity=0.330  Sum_probs=205.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|+||+++||||++|||+++|++|+++|++|++++|++++       ++++.+++   +.+..++.+|++++++++++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~-------l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~   70 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENG-------AQAISDYL---GANGKGLMLNVTDPASIESVLE   70 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH-------HHHHHHHH---GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHHHh---CCCCcEEEEEecCHHHhhhhhh
Confidence            5899999999999999999999999999999999998754       23334333   5678889999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.++||+||+||||||.....++.                                                       
T Consensus        71 ~~~~~~g~iDilVnnAg~~~~~~~~-------------------------------------------------------   95 (243)
T d1q7ba_          71 KIRAEFGEVDILVNNAGITRDNLLM-------------------------------------------------------   95 (243)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCCCGG-------------------------------------------------------
T ss_pred             hhhcccCCcceehhhhhhccccccc-------------------------------------------------------
Confidence            9999999999999999987655443                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                          +.+.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++++|++||+|+.+|+|++|.||+
T Consensus        96 ----~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~ela  169 (243)
T d1q7ba_          96 ----RMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG--NGGQANYAAAKAGLIGFSKSLAREVA  169 (243)
T ss_dssp             ----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----cccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence                899999999999999999999999999999999999999999998877  47899999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++|||||+|+||+ +.|++.+...+.      ...|..|+.+|||+|++++||+|+.++|+|||.| +|||+
T Consensus       170 ~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         170 SRGITVNVVAPGF-IETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             GGTEEEEEEEECS-BCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             ccCeEEEEEecce-EechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            9999999999996 677766543321      1236678889999999999999999999999999 77774

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=8.7e-52  Score=383.92  Aligned_cols=237  Identities=24%  Similarity=0.301  Sum_probs=208.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++. .+.++.++.+|++|++++++++
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~   73 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDV-------GEKAAKSVG-TPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHC-CTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHhC-CCCcEEEEEccCCCHHHHHHHH
Confidence            37999999999999999999999999999999999998764       334555553 3568999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+....++.                                                      
T Consensus        74 ~~~~~~~G~iDiLVnnAg~~~~~~~~------------------------------------------------------   99 (251)
T d1zk4a1          74 DATEKAFGPVSTLVNNAGIAVNKSVE------------------------------------------------------   99 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTT------------------------------------------------------
T ss_pred             HHHHHHhCCceEEEeccccccccchh------------------------------------------------------
Confidence            99999999999999999987655443                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCC-eEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g-~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +++.++|++++++|+.++|+++|+++|+|++++.| +||++||..+..+  .+++.+|++||+|+.+|+|++|.|
T Consensus       100 -----~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  172 (251)
T d1zk4a1         100 -----ETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG--DPSLGAYNASKGAVRIMSKSAALD  172 (251)
T ss_dssp             -----TCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc--CCCchhHHHHHHHHhcchHHHHHH
Confidence                 89999999999999999999999999999998865 8999999999877  488999999999999999999998


Q ss_pred             --hcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 --FKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 --~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                        ++++|||||+|+||+ +.|++.+.....       ...|..|+.+|||||++++||+|+.++|+||+.| +|||++
T Consensus       173 ~~l~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         173 CALKDYDVRVNTVHPGY-IKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHTTCSEEEEEEEECC-BCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhcCCCcEEEEEEeCCC-CCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence              568999999999996 677776554321       1246678889999999999999999999999999 888875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.6e-51  Score=378.76  Aligned_cols=227  Identities=22%  Similarity=0.322  Sum_probs=198.1

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.+..++                  +..+++|++|+++++++
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~------------------~~~~~~Dv~~~~~v~~~   63 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------------LFGVEVDVTDSDAVDRA   63 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------------SEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcC------------------ceEEEEecCCHHHHHHH
Confidence            468999999999999999999999999999999999999876543                  56789999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.++||+||+||||||+....++.                                                     
T Consensus        64 ~~~~~~~~g~iDiLVnnAG~~~~~~~~-----------------------------------------------------   90 (237)
T d1uzma1          64 FTAVEEHQGPVEVLVSNAGLSADAFLM-----------------------------------------------------   90 (237)
T ss_dssp             HHHHHHHHSSCSEEEEECSCCC----------------------------------------------------------
T ss_pred             HHHHHHhcCCceEEEeeecccccccHh-----------------------------------------------------
Confidence            999999999999999999987654433                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|
T Consensus        91 ------~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  162 (237)
T d1uzma1          91 ------RMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG--IGNQANYAASKAGVIGMARSIARE  162 (237)
T ss_dssp             ------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC--CcccHHHHHHHHHHHHHHHHHHhh
Confidence                  899999999999999999999999999999999999999999999977  478999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ ++|++.+.+.+.      ...|..|+.+|||+|++++||+|++++|+||+.| +|||.
T Consensus       163 ~~~~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         163 LSKANVTANVVAPGY-IDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HGGGTEEEEEEEECS-BCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             hhcCCceeeeeeeCc-CCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            999999999999996 677776544321      1236678899999999999999999999999999 77763

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.5e-51  Score=383.86  Aligned_cols=234  Identities=23%  Similarity=0.323  Sum_probs=208.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|||+|||||++|||+++|++|+++|++|++++|+.++       ++++.++++..+.++.++++|++|+++++++++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-------l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~   73 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG-------LRTTLKELREAGVEADGRTCDVRSVPEIEALVAAV   73 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999999999999998764       55678888888999999999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .++||+||+||||||+....++.                                                         
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~---------------------------------------------------------   96 (257)
T d2rhca1          74 VERYGPVDVLVNNAGRPGGGATA---------------------------------------------------------   96 (257)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGG---------------------------------------------------------
T ss_pred             HHHhCCCCEEEecccccCCCChH---------------------------------------------------------
Confidence            99999999999999987654433                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHH--hHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPY--LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~--m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                        +++.++|++++++|+.++|+++|+++|+  |++++.|+||+++|..+..+  .+++.+|++||+|+.+|+|+||.|++
T Consensus        97 --~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~--~~~~~~Y~asKaal~~ltk~lA~el~  172 (257)
T d2rhca1          97 --ELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG--VVHAAPYSASKHGVVGFTKALGLELA  172 (257)
T ss_dssp             --GCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --HcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc--cccchhHHHHHHHHHHHHHHHHHHhh
Confidence              8999999999999999999999999997  56777899999999999987  48899999999999999999999999


Q ss_pred             CCCeEEEEecchhhhhHHHHHHhcC-------C----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         246 GDNIAVNALWPRTAIYTAAIEMLTG-------G----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       246 ~~gI~vn~v~PG~~~~t~~~~~~~~-------~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      ++|||||+|+||+ +.|++.+....       .          ...|..|+.+|+|+|++++||+|+.++|+||+.| +|
T Consensus       173 ~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vD  251 (257)
T d2rhca1         173 RTGITVNAVCPGF-VETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVC  251 (257)
T ss_dssp             TSEEEEEEEEECS-BCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhCcEEEEEeeCC-CCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEEC
Confidence            9999999999996 66766543311       0          1235678899999999999999999999999999 77


Q ss_pred             hhH
Q psy6113         308 DEV  310 (406)
Q Consensus       308 ~g~  310 (406)
                      ||.
T Consensus       252 GG~  254 (257)
T d2rhca1         252 GGL  254 (257)
T ss_dssp             TTC
T ss_pred             cCc
Confidence            764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.6e-51  Score=382.73  Aligned_cols=237  Identities=24%  Similarity=0.283  Sum_probs=208.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.++++..+.++.++.||+++++++++++
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   73 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREA-------LEKAEASVREKGVEARSYVCDVTSEEAVIGTV   73 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            37999999999999999999999999999999999998764       55677888888999999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+.....                                                        
T Consensus        74 ~~~~~~~g~iDilVnnaG~~~~~~--------------------------------------------------------   97 (260)
T d1zema1          74 DSVVRDFGKIDFLFNNAGYQGAFA--------------------------------------------------------   97 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCB--------------------------------------------------------
T ss_pred             HHHHHHhCCCCeehhhhccccccC--------------------------------------------------------
Confidence            999999999999999999764322                                                        


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                        ++.+++.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|+
T Consensus        98 --~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~el  173 (260)
T d1zema1          98 --PVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG--PPNMAAYGTSKGAIIALTETAALDL  173 (260)
T ss_dssp             --CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC--CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --ccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC--CcchHHHHHHHHHHHHHHHHHHHHh
Confidence              223899999999999999999999999999999999999999999999877  4789999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHh--------cCC--------------CcccccccCChhhHHHHHHHhhcCCCCCccc
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEML--------TGG--------------SADAKATSRKPEIMADAAYYILSSNPPSLTG  302 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~--------~~~--------------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG  302 (406)
                      +++|||||+|+||+ +.|++....        ...              ...|..|+.+|+|+|++++||+|+.++|+||
T Consensus       174 ~~~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG  252 (260)
T d1zema1         174 APYNIRVNAISPGY-MGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTG  252 (260)
T ss_dssp             GGGTEEEEEEEECS-BCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCS
T ss_pred             hhhCCEEEEeccCc-ccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccC
Confidence            99999999999996 555433211        000              0125677889999999999999999999999


Q ss_pred             eEE-Eehh
Q psy6113         303 QFL-IDDE  309 (406)
Q Consensus       303 ~~i-~d~g  309 (406)
                      +.| +|||
T Consensus       253 ~~i~VDGG  260 (260)
T d1zema1         253 VNLPIAGG  260 (260)
T ss_dssp             CEEEESCC
T ss_pred             CeEEeCCC
Confidence            999 6665

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.1e-51  Score=378.52  Aligned_cols=233  Identities=27%  Similarity=0.376  Sum_probs=206.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ++||||||++|||+++|++|+++|++|++.+++.++      .++++.++++..+.++.++++|++|+++++++++++.+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~------~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAK------AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHH------HHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999998665432      24567778888899999999999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      +||+||+||||||+....++.                                                           
T Consensus        76 ~~g~iDiLVnnAg~~~~~~~~-----------------------------------------------------------   96 (244)
T d1edoa_          76 AWGTIDVVVNNAGITRDTLLI-----------------------------------------------------------   96 (244)
T ss_dssp             HSSCCSEEEECCCCCCCCCGG-----------------------------------------------------------
T ss_pred             HcCCCCccccccccccccchh-----------------------------------------------------------
Confidence            999999999999987655443                                                           


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCe
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI  249 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  249 (406)
                      +.+.++|++++++|+.++|+++|+++|+|++++.|+|||+||..+..+  .++..+|++||+|+.+|+|+||.||+++||
T Consensus        97 ~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~el~~~gI  174 (244)
T d1edoa_          97 RMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG--NIGQANYAAAKAGVIGFSKTAAREGASRNI  174 (244)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             ccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC--CCCCHHHHHHHHHHHHChHHHHHHHhhhCc
Confidence            899999999999999999999999999999999999999999999877  478999999999999999999999999999


Q ss_pred             EEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhh-cCCCCCccceEE-EehhH
Q psy6113         250 AVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYIL-SSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       250 ~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~-s~~~~~~tG~~i-~d~g~  310 (406)
                      |||+|+||+ ++|++.+.+.+.      ...|..|+.+|+|+|++++||+ |+.++|+||+.+ +|||+
T Consensus       175 rvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         175 NVNVVCPGF-IASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             EEEEEEECS-BCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             EEEEEecce-eccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            999999996 677766544321      1236678899999999999997 899999999999 77775

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-51  Score=377.97  Aligned_cols=233  Identities=25%  Similarity=0.372  Sum_probs=202.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.           .+++.+...++.++.+|++|++++++++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-----------~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESG-----------GRALEQELPGAVFILCDVTQEDDVKTLV   70 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHCTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----------HHHHHHhcCCCeEEEccCCCHHHHHHHH
Confidence            48999999999999999999999999999999999998653           3344445567889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+......                                                       
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~~~~~-------------------------------------------------------   95 (250)
T d1ydea1          71 SETIRRFGRLDCVVNNAGHHPPPQR-------------------------------------------------------   95 (250)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCC-------------------------------------------------------
T ss_pred             HHHHHhcCCCCEEEecccccccccc-------------------------------------------------------
Confidence            9999999999999999997643322                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                         +.+++.++|++++++|+.++|+++|+++|+|++++ |+||++||..+..+  .+++.+|++||+|+.+|+|+||.|+
T Consensus        96 ---~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e~  169 (250)
T d1ydea1          96 ---PEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIG--QAQAVPYVATKGAVTAMTKALALDE  169 (250)
T ss_dssp             ---GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---cccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccc--ccCcchhHHHHhhHHHHHHHHHHHh
Confidence               23789999999999999999999999999998765 99999999998876  4789999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+||+ +.|++.+......            ..|..|+.+|+|+|++++||+|+ ++|+||+.+ +|||+.
T Consensus       170 a~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~~  247 (250)
T d1ydea1         170 SPYGVRVNCISPGN-IWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAE  247 (250)
T ss_dssp             GGGTCEEEEEEECS-BCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred             cccCeEEEEEeeCC-CCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCcCCeEEECCCcc
Confidence            99999999999996 6777765543221            12567788999999999999997 789999999 777754

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.2e-51  Score=381.32  Aligned_cols=234  Identities=23%  Similarity=0.313  Sum_probs=202.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++       +   .+..++.+.++.++.+|+++++++++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------l---~~~~~~~~~~~~~~~~Dvt~~~~v~~~~   70 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEA-------A---RATAAEIGPAACAIALDVTDQASIDRCV   70 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHH-------H---HHHHHHHCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------H---HHHHHHhCCceEEEEeeCCCHHHHHHHH
Confidence            57999999999999999999999999999999999998654       2   2333445788999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+....+..                                                      
T Consensus        71 ~~~~~~~g~iDilVnnAg~~~~~~~~------------------------------------------------------   96 (256)
T d1k2wa_          71 AELLDRWGSIDILVNNAALFDLAPIV------------------------------------------------------   96 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHhCCccEEEeecccccccccc------------------------------------------------------
Confidence            99999999999999999987654433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +++.++|++++++|+.|+++++|+++|+|.++ +.|+||++||..+..+  .+++++|++||+|+.+|+|++|.|
T Consensus        97 -----~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  169 (256)
T d1k2wa_          97 -----EITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG--EALVGVYCATKAAVISLTQSAGLN  169 (256)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc--cccccchhhhhhHHHHHHHHHHHH
Confidence                 88999999999999999999999999987665 5799999999999987  488999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcC---------CC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTG---------GS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~---------~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      |+++|||||+|+||+ ++|++.+....         ..        ..|..|+.+|+|||++++||+|+.++|+||+.| 
T Consensus       170 l~~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~  248 (256)
T d1k2wa_         170 LIRHGINVNAIAPGV-VDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYN  248 (256)
T ss_dssp             HGGGTEEEEEEEECC-BCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEE
T ss_pred             hcccCeEEEEEecCC-CCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEE
Confidence            999999999999996 56654432211         00        125678889999999999999999999999999 


Q ss_pred             EehhH
Q psy6113         306 IDDEV  310 (406)
Q Consensus       306 ~d~g~  310 (406)
                      +|||.
T Consensus       249 vDGG~  253 (256)
T d1k2wa_         249 VDGGN  253 (256)
T ss_dssp             ESTTS
T ss_pred             ECcch
Confidence            77763

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=9e-51  Score=378.09  Aligned_cols=232  Identities=28%  Similarity=0.365  Sum_probs=206.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |+||||||++|||+++|++|+++|++|++++|+.++       ++++.+++++.+.++.+++||++++++++++++++.+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT-------AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARK   74 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            789999999999999999999999999999998765       5567888888899999999999999999999999999


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      +||+||+||||||+....++                                                           .
T Consensus        75 ~~g~iDilVnnAG~~~~~~~-----------------------------------------------------------~   95 (255)
T d1gega_          75 TLGGFDVIVNNAGVAPSTPI-----------------------------------------------------------E   95 (255)
T ss_dssp             HTTCCCEEEECCCCCCCBCG-----------------------------------------------------------G
T ss_pred             HhCCccEEEecccccccCcH-----------------------------------------------------------H
Confidence            99999999999998654443                                                           3


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                      +++.++|++++++|+.|+|+++|+++|+|.+++ .++||++||..+..+  .++++.|++||+|+.+|+|+||.||+++|
T Consensus        96 ~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~el~~~g  173 (255)
T d1gega_          96 SITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG--NPELAVYSSSKFAVRGLTQTAARDLAPLG  173 (255)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             Hhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc--CcccccchhCHHHHHhhHHHHHHHhhhhC
Confidence            899999999999999999999999999987765 578999999999877  48899999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcC-------C----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTG-------G----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~-------~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||||+|+||+ +.|++......       .          ...|..|+.+|+|+|++++||+|+.++|+||+.+ +|||+
T Consensus       174 IrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         174 ITVNGYCPGI-VKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             EEEEEEEECS-BSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             cEEEEEecCc-ccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence            9999999996 66666543211       0          1235678899999999999999999999999999 77775

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=9.7e-51  Score=377.15  Aligned_cols=235  Identities=21%  Similarity=0.335  Sum_probs=203.4

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.   ++.+.+..++++|++++++++++
T Consensus         1 tnrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~-------~~~~~---~~~~~~~~~~~~Dv~~~~~~~~~   70 (253)
T d1hxha_           1 TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAA-------GQQLA---AELGERSMFVRHDVSSEADWTLV   70 (253)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHH-------HHHHH---HHHCTTEEEECCCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHH---HHhCCCeEEEEeecCCHHHHHHH
Confidence            468999999999999999999999999999999999998654       22333   33477889999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.++||++|+||||||+....++.                                                     
T Consensus        71 ~~~~~~~~g~iDilVnnAG~~~~~~~~-----------------------------------------------------   97 (253)
T d1hxha_          71 MAAVQRRLGTLNVLVNNAGILLPGDME-----------------------------------------------------   97 (253)
T ss_dssp             HHHHHHHHCSCCEEEECCCCCCCBCTT-----------------------------------------------------
T ss_pred             HHHHHHHhCCCCeEEecccccCCCCcc-----------------------------------------------------
Confidence            999999999999999999987654443                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|++++++|+.++|+++|+++|+|+++ +|+|||+||..+..+  .+++++|++||+|+.+|+|++|.|
T Consensus        98 ------~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  168 (253)
T d1hxha_          98 ------TGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLP--IEQYAGYSASKAAVSALTRAAALS  168 (253)
T ss_dssp             ------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcC--ccccccccchhHHHHHHHHHHHHH
Confidence                  89999999999999999999999999999865 499999999999887  478999999999999999999999


Q ss_pred             hcC--CCeEEEEecchhhhhHHHHHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         244 FKG--DNIAVNALWPRTAIYTAAIEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       244 ~~~--~gI~vn~v~PG~~~~t~~~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +++  +|||||+|+||+ +.|++.+...+..           ..+..|+.+|||+|++++||+|+.++|+|||.+ +|||
T Consensus       169 ~~~~g~~IrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         169 CRKQGYAIRVNSIHPDG-IYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHHTCCEEEEEEEESE-ECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HhhcCCCEEEEEEeECC-CcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            987  469999999996 6676665443221           113446778999999999999999999999999 7777


Q ss_pred             HH
Q psy6113         310 VL  311 (406)
Q Consensus       310 ~~  311 (406)
                      ++
T Consensus       248 ~~  249 (253)
T d1hxha_         248 IL  249 (253)
T ss_dssp             CT
T ss_pred             Hh
Confidence            64

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.8e-50  Score=378.85  Aligned_cols=242  Identities=21%  Similarity=0.271  Sum_probs=206.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +.+|+||+||||||++|||+++|++|+++|++|++++|+.++       ++++.+++... +.+.++.||++++++++++
T Consensus         1 tnrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~-------~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~   72 (268)
T d2bgka1           1 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDH-------GQKVCNNIGSP-DVISFVHCDVTKDEDVRNL   72 (268)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHCCT-TTEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHhcCC-CceEEEEccCCCHHHHHHH
Confidence            468999999999999999999999999999999999998764       34556666443 4577889999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.++||+||+||||||+....+.                                                      
T Consensus        73 ~~~~~~~~g~iD~lVnnAG~~~~~~~------------------------------------------------------   98 (268)
T d2bgka1          73 VDTTIAKHGKLDIMFGNVGVLSTTPY------------------------------------------------------   98 (268)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSCS------------------------------------------------------
T ss_pred             HHHHHHHcCCcceeccccccccCCCc------------------------------------------------------
Confidence            99999999999999999998654431                                                      


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         .+.+.+.++|++++++|+.|+|+++|+++|+|++++.|+||++||..+..+. .+....|++||+|+.+|+|+||.|
T Consensus        99 ---~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~-~~~~~~Y~asKaal~~lt~~lA~e  174 (268)
T d2bgka1          99 ---SILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-EGVSHVYTATKHAVLGLTTSLCTE  174 (268)
T ss_dssp             ---STTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-TTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc-cccccccchhHHHHHhCHHHHHHH
Confidence               1238899999999999999999999999999999999999999999888764 234568999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC-----------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS-----------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~-----------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+++|||||+|+||+ +.|++........           ..+..|+.+|||||++++||+|+.++|+|||.| +|||++
T Consensus       175 l~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         175 LGEYGIRVNCVSPYI-VASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             HGGGTEEEEEEEESC-CSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hChhCeEEEecCCCC-ccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence            999999999999996 5665433322211           124467889999999999999999999999999 888876


Q ss_pred             H
Q psy6113         312 K  312 (406)
Q Consensus       312 ~  312 (406)
                      .
T Consensus       254 ~  254 (268)
T d2bgka1         254 R  254 (268)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.1e-51  Score=376.08  Aligned_cols=232  Identities=26%  Similarity=0.330  Sum_probs=198.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+++       +++.+   .  .++.++.||++|++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l-------~~~~~---~--~~~~~~~~Dv~~~~~v~~~~   68 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL-------REAAE---A--VGAHPVVMDVADPASVERGF   68 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHH---T--TTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHH---H--cCCeEEEEecCCHHHHHHHH
Confidence            579999999999999999999999999999999999986542       22222   2  24667899999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+....++.                                                      
T Consensus        69 ~~~~~~~g~iDilVnnAG~~~~~~~~------------------------------------------------------   94 (242)
T d1ulsa_          69 AEALAHLGRLDGVVHYAGITRDNFHW------------------------------------------------------   94 (242)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHhcCCceEEEECCcccccCchh------------------------------------------------------
Confidence            99999999999999999987654433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +++.++|++++++|+.++|+++|+++|+|++++.++|+++||.. ..+  .+++.+|++||+|+.+|+|+||.||
T Consensus        95 -----~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~--~~~~~~Y~asKaal~~ltk~lA~el  166 (242)
T d1ulsa_          95 -----KMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLG--NLGQANYAASMAGVVGLTRTLALEL  166 (242)
T ss_dssp             -----GCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccC--CCCCcchHHHHHHHHHHHHHHHHHH
Confidence                 89999999999999999999999999999999989999988854 333  4788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+||+ +.|++.+...+.      ...|..|+.+|+|+|++++||+|+.++|+||+.+ +|||++
T Consensus       167 a~~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         167 GRWGIRVNTLAPGF-IETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             GGGTEEEEEEEECS-BCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hhhCcEEEEEeeCc-ccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            99999999999996 666543322111      0135678889999999999999999999999999 787764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-49  Score=366.93  Aligned_cols=231  Identities=24%  Similarity=0.334  Sum_probs=198.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++           .+++.+....+.++.+|++|++++++++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------l~~~~~~~~~~~~~~~Dv~~~~~v~~~~   69 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD-----------LVSLAKECPGIEPVCVDLGDWDATEKAL   69 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHSTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-----------HHHHHHhcCCCeEEEEeCCCHHHHHHHH
Confidence            57999999999999999999999999999999999998653           2223333345778899999999876654


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                          +++|+||+||||||+....++                                                       
T Consensus        70 ----~~~g~iDilVnnAg~~~~~~~-------------------------------------------------------   90 (242)
T d1cyda_          70 ----GGIGPVDLLVNNAALVIMQPF-------------------------------------------------------   90 (242)
T ss_dssp             ----TTCCCCSEEEECCCCCCCBCG-------------------------------------------------------
T ss_pred             ----HHcCCCeEEEECCccccchhH-------------------------------------------------------
Confidence                568999999999998655443                                                       


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          .+++.++|++++++|+.++++++|+++|+|.++ +.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|
T Consensus        91 ----~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  164 (242)
T d1cyda_          91 ----LEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT--FPNLITYSSTKGAMTMLTKAMAME  164 (242)
T ss_dssp             ----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc--CCccccccchHHHHHHHHHHHHHH
Confidence                389999999999999999999999999987654 5689999999998877  578999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~  312 (406)
                      ++++|||||+|+||+ +.|++.+.....+        ..|..|+.+|||+|++++||+|+.++|+|||.| +|||+++
T Consensus       165 ~~~~gIrvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         165 LGPHKIRVNSVNPTV-VLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA  241 (242)
T ss_dssp             HGGGTEEEEEEEECC-BTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred             hCccCeecccCCCCC-ccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcchhc
Confidence            999999999999996 6777776654432        125678899999999999999999999999999 8888763

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.7e-50  Score=373.70  Aligned_cols=240  Identities=23%  Similarity=0.366  Sum_probs=193.6

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC---CeeeeeeecCCChHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG---GNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g---~~~~~~~~Dl~~~~~v~~   82 (406)
                      +|+||+||||||++|||+++|++|+++|++|++++|+.++       ++++.+++.+.+   .++.++.+|+++++++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~   74 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAER-------LEETRQQILAAGVSEQNVNSVVADVTTDAGQDE   74 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCcCceEEEEccCCCHHHHHH
Confidence            7999999999999999999999999999999999998765       446777777764   358899999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.++||+||+||||||+..+....                                                    
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~----------------------------------------------------  102 (264)
T d1spxa_          75 ILSTTLGKFGKLDILVNNAGAAIPDSQS----------------------------------------------------  102 (264)
T ss_dssp             HHHHHHHHHSCCCEEEECCC------------------------------------------------------------
T ss_pred             HHHHHHHHhCCCCEeecccccccCCccc----------------------------------------------------
Confidence            9999999999999999999986543322                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCC-CCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP-LNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~-~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                         .++.+.+.++|++++++|+.++|+++|+++|+|++++ |+||+++|. ++..+  .+++..|++||+|+.+|+|+||
T Consensus       103 ---~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~--~~~~~~Y~asKaal~~lt~~lA  176 (264)
T d1spxa_         103 ---KTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA--TPDFPYYSIAKAAIDQYTRNTA  176 (264)
T ss_dssp             --------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC--CTTSHHHHHHHHHHHHHHHHHH
T ss_pred             ---cccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecccccc--CCCchhhhhhhhhHHHHHHHHH
Confidence               1223778999999999999999999999999998876 556655555 45655  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC---------------cccccccCChhhHHHHHHHhhcC-CCCCccceEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS---------------ADAKATSRKPEIMADAAYYILSS-NPPSLTGQFL  305 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~---------------~~~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~~i  305 (406)
                      .|++++|||||+|+||+ +.|++.+......               ..|..|+.+|+|||++++||+|+ .++|+||+.+
T Consensus       177 ~el~~~gIrVN~V~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i  255 (264)
T d1spxa_         177 IDLIQHGIRVNSISPGL-VATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQL  255 (264)
T ss_dssp             HHHGGGTCEEEEEEECC-BCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEE
T ss_pred             HHhcccCeEEEEEeeCC-CCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceE
Confidence            99999999999999996 5665443322111               12567788999999999999995 4889999999


Q ss_pred             -EehhHH
Q psy6113         306 -IDDEVL  311 (406)
Q Consensus       306 -~d~g~~  311 (406)
                       +|||+.
T Consensus       256 ~vDGG~s  262 (264)
T d1spxa_         256 VVDGGSS  262 (264)
T ss_dssp             EESTTGG
T ss_pred             EeCCChh
Confidence             777763

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-49  Score=374.27  Aligned_cols=244  Identities=22%  Similarity=0.303  Sum_probs=205.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC---CeeeeeeecCCChHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG---GNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g---~~~~~~~~Dl~~~~~v~   81 (406)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++.+.+   .++.++.||++++++++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~-------l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~   73 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER-------LEETRQIILKSGVSEKQVNSVVADVTTEDGQD   73 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCCCceEEEEccCCCHHHHH
Confidence            58999999999999999999999999999999999998765       456677777654   36889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.++||+||+||||||+..+..+..                                                  
T Consensus        74 ~~~~~~~~~~g~iDilvnnAG~~~~~~~~~--------------------------------------------------  103 (272)
T d1xkqa_          74 QIINSTLKQFGKIDVLVNNAGAAIPDAFGT--------------------------------------------------  103 (272)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCC--------------------------------------------------
T ss_pred             HHHHHHHHHhCCceEEEeCCcccCcccccc--------------------------------------------------
Confidence            999999999999999999999876654431                                                  


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                           ...+.+.++|++++++|+.++|+++|+++|+|++++++.|+++||.++..+  .+++..|++||+|+.+|+|+||
T Consensus       104 -----~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~--~~~~~~Y~asKaal~~ltk~lA  176 (272)
T d1xkqa_         104 -----TGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA--QPDFLYYAIAKAALDQYTRSTA  176 (272)
T ss_dssp             -----CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC--CCSSHHHHHHHHHHHHHHHHHH
T ss_pred             -----cchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC--CCCcchhhhHHHHHHHHHHHHH
Confidence                 112677889999999999999999999999999886555555555667766  4789999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCC---------------CcccccccCChhhHHHHHHHhhcCC-CCCccceEE
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGG---------------SADAKATSRKPEIMADAAYYILSSN-PPSLTGQFL  305 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~---------------~~~~~~~~~~pe~vA~~v~~L~s~~-~~~~tG~~i  305 (406)
                      .||+++|||||+|+||+ +.|++.+.....               ...|..|+.+|||||++++||+|++ +.|+|||.+
T Consensus       177 ~el~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i  255 (272)
T d1xkqa_         177 IDLAKFGIRVNSVSPGM-VETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSI  255 (272)
T ss_dssp             HHHHTTTCEEEEEEECC-BCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEE
T ss_pred             HHhcccCeEEEEEeeCC-CcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEE
Confidence            99999999999999996 666665543221               1236678899999999999999965 579999999


Q ss_pred             -EehhHHHH
Q psy6113         306 -IDDEVLKA  313 (406)
Q Consensus       306 -~d~g~~~~  313 (406)
                       +|||+.-.
T Consensus       256 ~vDGG~~l~  264 (272)
T d1xkqa_         256 VADGGTSLV  264 (272)
T ss_dssp             EESTTGGGC
T ss_pred             EeCcCHHHh
Confidence             88887643

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.9e-49  Score=372.79  Aligned_cols=243  Identities=23%  Similarity=0.305  Sum_probs=209.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCC---eeeeeeecCCChHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG---NCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~---~~~~~~~Dl~~~~~v~~   82 (406)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++.+.+.   ++.++.+|+++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~   73 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDR-------LEETKQQILKAGVPAEKINAVVADVTEASGQDD   73 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHH
Confidence            6899999999999999999999999999999999998765       4567777777653   68899999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.++||+||+||||||.....+..                                                    
T Consensus        74 ~~~~~~~~~G~iDilVnnAG~~~~~~~~----------------------------------------------------  101 (274)
T d1xhla_          74 IINTTLAKFGKIDILVNNAGANLADGTA----------------------------------------------------  101 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCSCC----------------------------------------------------
T ss_pred             HHHHHHHHcCCceEEEeecccccccccc----------------------------------------------------
Confidence            9999999999999999999976443322                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                           +.+.+.++|++++++|+.++|+++|+++|+|++++.++|+++||.++..+  .+++++|++||+|+.+|+|+||.
T Consensus       102 -----~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~--~~~~~~Y~asKaal~~ltk~lA~  174 (274)
T d1xhla_         102 -----NTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA--HSGYPYYACAKAALDQYTRCTAI  174 (274)
T ss_dssp             -----GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC--CTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc--CCCCceehhhhhHHHHHHHHHHH
Confidence                 12678899999999999999999999999999999999999999888876  47889999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcC---------------CCcccccccCChhhHHHHHHHhhcC-CCCCccceEE-
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTG---------------GSADAKATSRKPEIMADAAYYILSS-NPPSLTGQFL-  305 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~---------------~~~~~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~~i-  305 (406)
                      ||+++|||||+|+||+ +.|++......               ....|..|+.+|+|||++++||+|+ .++|+||+.+ 
T Consensus       175 ela~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~  253 (274)
T d1xhla_         175 DLIQHGVRVNSVSPGA-VATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIV  253 (274)
T ss_dssp             HHGGGTCEEEEEEECC-BCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEE
T ss_pred             HHhHhCCceeeeccCC-CcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEE
Confidence            9999999999999996 56655443321               1223677889999999999999995 6899999999 


Q ss_pred             EehhHHHHhc
Q psy6113         306 IDDEVLKAQH  315 (406)
Q Consensus       306 ~d~g~~~~~~  315 (406)
                      +|||++-..|
T Consensus       254 vDGG~~l~~g  263 (274)
T d1xhla_         254 ADGGSTLVMG  263 (274)
T ss_dssp             ESTTGGGCCG
T ss_pred             eCcCHHHhcC
Confidence            8888765444

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=6.1e-49  Score=366.04  Aligned_cols=239  Identities=23%  Similarity=0.341  Sum_probs=208.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+||||||++|||+++|++|+++|++|++++|++++       ++++.+++...+.++.++.+|+++++++++++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~-------l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~   74 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE-------LDECLEIWREKGLNVEGSVCDLLSRTERDKLM   74 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCceEEEeecCCHHHHHHHH
Confidence            46899999999999999999999999999999999998765       45678888888999999999999999999999


Q ss_pred             HHHHHhc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          85 NAAVDKF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        85 ~~i~~~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +++.+++ +++|+||||||+....++.                                                     
T Consensus        75 ~~~~~~~~g~idilinnag~~~~~~~~-----------------------------------------------------  101 (258)
T d1ae1a_          75 QTVAHVFDGKLNILVNNAGVVIHKEAK-----------------------------------------------------  101 (258)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCTT-----------------------------------------------------
T ss_pred             HHHHHHhCCCcEEEeccccccccCccc-----------------------------------------------------
Confidence            9999999 5899999999987655443                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +++.++|++++++|+.++|+++++++|+|.+++.|+||++||..+..+  .+++.+|+++|+|+++|+|++|+|
T Consensus       102 ------~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sK~al~~lt~~lA~e  173 (258)
T d1ae1a_         102 ------DFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA--LPSVSLYSASKGAINQMTKSLACE  173 (258)
T ss_dssp             ------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc--cccchhHHHHHHHHHHHHHHHHHh
Confidence                  899999999999999999999999999999999999999999999887  488999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ++++|||||+|+||+ +.|++.+......            ..|..|+.+|+|+|++++||+|+.++|+||+.| +|||+
T Consensus       174 l~~~gIrvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         174 WAKDNIRVNSVAPGV-ILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             HGGGTEEEEEEEECS-BC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCcCcEEEEEEeeCc-ccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence            999999999999996 6776654443221            125677889999999999999999999999999 77776


Q ss_pred             HH
Q psy6113         311 LK  312 (406)
Q Consensus       311 ~~  312 (406)
                      +.
T Consensus       253 s~  254 (258)
T d1ae1a_         253 TA  254 (258)
T ss_dssp             GG
T ss_pred             ec
Confidence            53

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-49  Score=373.24  Aligned_cols=238  Identities=27%  Similarity=0.392  Sum_probs=205.0

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-----cCCeeeeeeecCCChH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-----AGGNCLPCIVDIRDEH   78 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-----~g~~~~~~~~Dl~~~~   78 (406)
                      ...|+||+||||||++|||+++|++|+++|++|++++|+.++       ++++.+++..     .+.++.++.+|++|++
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~-------l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~   79 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLER-------LKSAADELQANLPPTKQARVIPIQCNIRNEE   79 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhhhccccCceEEEEeccCCCHH
Confidence            467999999999999999999999999999999999998765       3456666654     3568999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      +++++++++.+++|+||+||||||+....++.                                                
T Consensus        80 ~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~------------------------------------------------  111 (297)
T d1yxma1          80 EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAE------------------------------------------------  111 (297)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCeEEEEeeccccccCchh------------------------------------------------
Confidence            99999999999999999999999987654443                                                


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                                 +.+.++|++++++|+.|+|+++|+++|+|++++.++||++||... .+  .++...|++||+|+.+|+|
T Consensus       112 -----------~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~~--~~~~~~Y~asKaal~~ltk  177 (297)
T d1yxma1         112 -----------HISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AG--FPLAVHSGAARAGVYNLTK  177 (297)
T ss_dssp             -----------GCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TC--CTTCHHHHHHHHHHHHHHH
T ss_pred             -----------hhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-cc--ccccccchhHHHHHHHHHH
Confidence                       899999999999999999999999999999999999999977443 33  4788999999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Ee
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-ID  307 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d  307 (406)
                      ++|.||+++|||||+|+||+ +.|++.......          ...|..|+.+|+|||++++||+|+.++|+||+.| +|
T Consensus       178 ~lA~el~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VD  256 (297)
T d1yxma1         178 SLALEWACSGIRINCVAPGV-IYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVD  256 (297)
T ss_dssp             HHHHHTGGGTEEEEEEEECS-BCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhcccCceEEEeeeCc-CcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeC
Confidence            99999999999999999996 555443211110          0125677889999999999999999999999999 77


Q ss_pred             hhHH
Q psy6113         308 DEVL  311 (406)
Q Consensus       308 ~g~~  311 (406)
                      ||+.
T Consensus       257 GG~s  260 (297)
T d1yxma1         257 GGRS  260 (297)
T ss_dssp             TTGG
T ss_pred             cChh
Confidence            7765

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-49  Score=364.05  Aligned_cols=231  Identities=25%  Similarity=0.298  Sum_probs=197.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+.++       +++    +.+....+.++.+|++|++++++++
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~-------l~~----~~~~~~~~~~~~~Dv~d~~~v~~~~   71 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD-------LDS----LVRECPGIEPVCVDLGDWEATERAL   71 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHH----HHHHSTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH-------HHH----HHHhcCCCeEEEEeCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998653       222    2233345778899999999987655


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                          +++|+||+||||||+....++.                                                      
T Consensus        72 ----~~~g~iDilVnnAg~~~~~~~~------------------------------------------------------   93 (244)
T d1pr9a_          72 ----GSVGPVDLLVNNAAVALLQPFL------------------------------------------------------   93 (244)
T ss_dssp             ----TTCCCCCEEEECCCCCCCBCGG------------------------------------------------------
T ss_pred             ----HHhCCceEEEeccccccccchh------------------------------------------------------
Confidence                5689999999999987654433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhH-hcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK-KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~-~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                           +.+.++|++++++|+.++++++|+++|+|. +++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.|
T Consensus        94 -----~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e  166 (244)
T d1pr9a_          94 -----EVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA--VTNHSVYCSTKGALDMLTKVMALE  166 (244)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc--ccchhhhhhhHHHHHHHHHHHHHH
Confidence                 899999999999999999999999999765 456799999999999877  478999999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~  312 (406)
                      |+++|||||+|+||+ +.|++.+......        ..|..|+.+|||||++++||+|+.++|+||+.| +|||++.
T Consensus       167 l~~~gIrvN~I~PG~-v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~A  243 (244)
T d1pr9a_         167 LGPHKIRVNAVNPTV-VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             HGGGTEEEEEEEECC-BCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hCCCcEEEEEEeeCc-CcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECccHhh
Confidence            999999999999996 6777765543321        235678899999999999999999999999999 8888764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3e-49  Score=368.85  Aligned_cols=241  Identities=23%  Similarity=0.263  Sum_probs=204.2

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.+++.       +..+++ +..+.++.++++|+++++++++
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~-------~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~   76 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV-------EVTEKVGKEFGVKTKAYQCDVSNTDIVTK   76 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHH-------HHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-------HHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence            46899999999999999999999999999999999999987643       344444 4568899999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.++||+||+||||||+....+..                                                    
T Consensus        77 ~~~~~~~~~g~iDilVnnAg~~~~~~~~----------------------------------------------------  104 (260)
T d1h5qa_          77 TIQQIDADLGPISGLIANAGVSVVKPAT----------------------------------------------------  104 (260)
T ss_dssp             HHHHHHHHSCSEEEEEECCCCCCCSCGG----------------------------------------------------
T ss_pred             HHHHHHHHhCCCcEecccccccccCCHH----------------------------------------------------
Confidence            9999999999999999999987654433                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCC-----ccCCchhhhHhhHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPF-----WFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~-----~~~~~~~Y~asKaal~~l  236 (406)
                             +.+.++|++++++|+.|+|+++|+++|+|.++ ..++|++++|.......     +.++...|++||+|+.+|
T Consensus       105 -------~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~l  177 (260)
T d1h5qa_         105 -------ELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNL  177 (260)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHH
T ss_pred             -------HhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHHHH
Confidence                   89999999999999999999999999998654 56788888886654321     135678999999999999


Q ss_pred             HHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         237 ALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       237 ~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +|+||.||+++|||||+|+||+ +.|++.....+.      ...|..|+.+|||||++++||+|+.++|+||+.| +|||
T Consensus       178 t~~lA~el~~~gIrvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         178 VKGLAAEWASAGIRVNALSPGY-VNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECS-BCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHHHHHHhchhCeEEeecCCCc-ccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence            9999999999999999999996 566544332111      1236678899999999999999999999999999 8888


Q ss_pred             HH
Q psy6113         310 VL  311 (406)
Q Consensus       310 ~~  311 (406)
                      ++
T Consensus       257 ~~  258 (260)
T d1h5qa_         257 QL  258 (260)
T ss_dssp             GG
T ss_pred             ee
Confidence            64

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-48  Score=359.01  Aligned_cols=239  Identities=23%  Similarity=0.317  Sum_probs=207.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC--CeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG--GNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g--~~~~~~~~Dl~~~~~v~   81 (406)
                      |.+|+||+||||||++|||+++|++|+++|++|++++|+.++       ++++.++++..+  +++.+++||++++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~-------l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~   77 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN-------IEELAAECKSAGYPGTLIPYRCDLSNEEDIL   77 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCSSEEEEEECCTTCHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCceEEEEEccCCCHHHHH
Confidence            667999999999999999999999999999999999998764       556788888765  57899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.++||+||+||||||.....++.                                                   
T Consensus        78 ~~v~~~~~~~g~iD~lVnnAg~~~~~~~~---------------------------------------------------  106 (257)
T d1xg5a_          78 SMFSAIRSQHSGVDICINNAGLARPDTLL---------------------------------------------------  106 (257)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCCCCTT---------------------------------------------------
T ss_pred             HHHHHHHHhcCCCCEEEecccccCCCccc---------------------------------------------------
Confidence            99999999999999999999987665544                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                              +.+.++|++.+++|+.++|+++++++|+|++++  .|+||++||.++....+.++...|++||+|+.+|+|+
T Consensus       107 --------~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~  178 (257)
T d1xg5a_         107 --------SGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEG  178 (257)
T ss_dssp             --------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHH
T ss_pred             --------cccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHH
Confidence                    899999999999999999999999999998865  6899999999987654456778899999999999999


Q ss_pred             HHHhh--cCCCeEEEEecchhhhhHHHHHHhcCCCc------ccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         240 MAEEF--KGDNIAVNALWPRTAIYTAAIEMLTGGSA------DAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       240 la~e~--~~~gI~vn~v~PG~~~~t~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      |+.|+  +++|||||+|+||+ ++|++.....+...      .+..++.+|||||++++||+|++++++|||++ .++|
T Consensus       179 la~el~~~~~~I~vn~i~PG~-i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         179 LRQELREAQTHIRATCISPGV-VETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHHHHTTCCCEEEEEEESC-BCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHhCCCCEEEEEEeCCC-CCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhcCeECCEEEEeCC
Confidence            99998  78999999999995 66666655544321      24567889999999999999999999999975 5554

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=3.8e-48  Score=356.86  Aligned_cols=224  Identities=23%  Similarity=0.365  Sum_probs=201.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCe-------EEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGAN-------IVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~-------Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      +|+|||||++|||+++|++|+++|++       |++.+|+.++       ++++.+++++.+.++.++.||++|++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~-------l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~   74 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD-------LEKISLECRAEGALTDTITADISDMADVRR   74 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH-------HHHHHHHHHTTTCEEEEEECCTTSHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            67999999999999999999999998       8899998765       456788888889999999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.++||+||+||||||+....++.                                                    
T Consensus        75 ~~~~~~~~~g~iDilvnnAg~~~~~~~~----------------------------------------------------  102 (240)
T d2bd0a1          75 LTTHIVERYGHIDCLVNNAGVGRFGALS----------------------------------------------------  102 (240)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCCCCGG----------------------------------------------------
T ss_pred             HHHHHHHHcCCcceeecccccccCCccc----------------------------------------------------
Confidence            9999999999999999999987655443                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                             +.+.++|++++++|+.|+|+++|+++|+|++++.|+||++||.++..+  .++++.|++||+|+.+|+|+|+.
T Consensus       103 -------~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asK~al~~lt~~la~  173 (240)
T d2bd0a1         103 -------DLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETMRL  173 (240)
T ss_dssp             -------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC--CCCChHHHHHHHHHHHHHHHHHH
Confidence                   899999999999999999999999999999999999999999999987  58899999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      |++++|||||+|+||+ +.|++.+..   ......+..+|||+|++++||+++++++++|+.+
T Consensus       174 el~~~gIrvn~i~PG~-v~T~~~~~~---~~~~~~~~~~PedvA~~v~~l~s~~~~~~~~~~~  232 (240)
T d2bd0a1         174 YARKCNVRITDVQPGA-VYTPMWGKV---DDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEII  232 (240)
T ss_dssp             HHTTTTEEEEEEEECC-BCSTTTCCC---CSTTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             HhCcCCeEEEEeeeCc-ccCchhhhc---CHhhHhcCCCHHHHHHHHHHHHcCCccCccCCEE
Confidence            9999999999999996 677654333   2234567789999999999999998999999866

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-48  Score=370.22  Aligned_cols=239  Identities=21%  Similarity=0.311  Sum_probs=204.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC--CcccHHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK--LPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~--~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.+....  ..+.+++..+++...+   ..+.+|+++.++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGE   78 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHH
Confidence            478999999999999999999999999999999999998765432  2334455555555544   45678999999999


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.++||+||+||||||+....++.                                                   
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~---------------------------------------------------  107 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFS---------------------------------------------------  107 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGG---------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChh---------------------------------------------------
Confidence            99999999999999999999987655443                                                   


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                              +++.++|++++++|+.|+|+++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+++|+
T Consensus       108 --------~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~--~~~~~~Y~asKaal~~lt~~la  177 (302)
T d1gz6a_         108 --------RISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG--NFGQANYSAAKLGLLGLANTLV  177 (302)
T ss_dssp             --------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             --------hCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCC--CCCcHHHHHHHHHHHHHHHHHH
Confidence                    899999999999999999999999999999999999999999999877  4789999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLK  312 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~  312 (406)
                      .|++++|||||+|+||+ ++|++....    ..+..+..+|||||++++||+|+.+ ++||+.+ +|||++.
T Consensus       178 ~E~~~~gIrVN~I~PG~-~~t~~~~~~----~~~~~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG~~~  243 (302)
T d1gz6a_         178 IEGRKNNIHCNTIAPNA-GSRMTETVM----PEDLVEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIG  243 (302)
T ss_dssp             HHTGGGTEEEEEEEEEC-CSTTTGGGS----CHHHHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEEE
T ss_pred             HHHhccCCceeeeCCCC-CCcchhhcC----cHhhHhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCCcee
Confidence            99999999999999995 555432221    2345677899999999999999765 7999999 8888764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=9.9e-48  Score=358.36  Aligned_cols=237  Identities=21%  Similarity=0.312  Sum_probs=205.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..|+||+||||||++|||+++|++|+++|++|++++|+.++      .++++.+++.+.+.++.++.+|++|++++++++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~------~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~   75 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSK------AAEEVVAELKKLGAQGVAIQADISKPSEVVALF   75 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChH------HHHHHHHHHHHcCCCceEecCCCCCHHHHHHHH
Confidence            46999999999999999999999999999999998776543      245678888899999999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|+||+||||||+....+..                                                      
T Consensus        76 ~~~~~~~g~idilinnag~~~~~~~~------------------------------------------------------  101 (259)
T d1ja9a_          76 DKAVSHFGGLDFVMSNSGMEVWCDEL------------------------------------------------------  101 (259)
T ss_dssp             HHHHHHHSCEEEEECCCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHcCCCcEEEeccccccccccc------------------------------------------------------
Confidence            99999999999999999987554433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.++++++|+++|+|+++  +++++++|..+.... .+++..|++||+|+.+|+|+||+||
T Consensus       102 -----~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~-~~~~~~Y~asK~al~~l~r~lA~e~  173 (259)
T d1ja9a_         102 -----EVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTG-IPNHALYAGSKAAVEGFCRAFAVDC  173 (259)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCS-CCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccC-CCCchhHHHHHHHHHHHHHHHHHHH
Confidence                 88999999999999999999999999999765  678777776665432 5789999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC-------------------cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS-------------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      +++|||||+|+||+ ++|++.+......                   ..|..|+.+|+|||++++||+|+.++++||+.|
T Consensus       174 ~~~gIrvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i  252 (259)
T d1ja9a_         174 GAKGVTVNCIAPGG-VKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVI  252 (259)
T ss_dssp             GGGTCEEEEEEECC-BSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             hhcCeEEeccCcCC-ccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceE
Confidence            99999999999996 6676655432110                   125567889999999999999999999999999


Q ss_pred             -EehhH
Q psy6113         306 -IDDEV  310 (406)
Q Consensus       306 -~d~g~  310 (406)
                       +|||.
T Consensus       253 ~vDGG~  258 (259)
T d1ja9a_         253 KLTGGG  258 (259)
T ss_dssp             EESTTC
T ss_pred             EeCCCC
Confidence             78874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.2e-47  Score=360.86  Aligned_cols=238  Identities=23%  Similarity=0.284  Sum_probs=199.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++          ..+..++.+.++..+.+|+++++++++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~----------l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~   70 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAER----------LAELETDHGDNVLGIVGDVRSLEDQKQAA   70 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHHHHHHHGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----------HHHHHHHcCCCeeEEecccccHHHHHHHH
Confidence            57999999999999999999999999999999999998653          22333445778999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||++|+||||||+........                                                     
T Consensus        71 ~~~~~~~g~idilvnnAG~~~~~~~~~-----------------------------------------------------   97 (276)
T d1bdba_          71 SRCVARFGKIDTLIPNAGIWDYSTALV-----------------------------------------------------   97 (276)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCTTCCGG-----------------------------------------------------
T ss_pred             HHHHHHhCCcccccccccccCCCCccc-----------------------------------------------------
Confidence            999999999999999999875543321                                                     


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                       ..+.+.+.++|++++++|+.|+|+++|+++|+|++++ |+||+++|..+..+  .+++++|++||+|+.+|+|+||.|+
T Consensus        98 -~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~--~~~~~~Y~asKaal~~ltr~lA~el  173 (276)
T d1bdba_          98 -DLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYP--NGGGPLYTAAKHAIVGLVRELAFEL  173 (276)
T ss_dssp             -GSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTST--TSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccC--CCCCchHHHHHHHHHHHHHHHHHHh
Confidence             1112566678999999999999999999999999876 89999999998877  4789999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHh---------cC-------CCcccccccCChhhHHHHHHHhhcC-CCCCccceEE-E
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEML---------TG-------GSADAKATSRKPEIMADAAYYILSS-NPPSLTGQFL-I  306 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~---------~~-------~~~~~~~~~~~pe~vA~~v~~L~s~-~~~~~tG~~i-~  306 (406)
                      +++ ||||+|+||+ +.|++....         ..       ....|..|+.+|+|+|++++||+|+ .++|+||+.+ +
T Consensus       174 a~~-IrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~V  251 (276)
T d1bdba_         174 APY-VRVNGVGSGG-INSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNY  251 (276)
T ss_dssp             TTT-CEEEEEEECC-CCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEE
T ss_pred             hcc-eEEcccCCCC-EecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEE
Confidence            975 9999999996 555432110         00       1123667889999999999999984 6899999999 7


Q ss_pred             ehhHH
Q psy6113         307 DDEVL  311 (406)
Q Consensus       307 d~g~~  311 (406)
                      |||+.
T Consensus       252 DGG~~  256 (276)
T d1bdba_         252 DGGLG  256 (276)
T ss_dssp             SSSGG
T ss_pred             CcChh
Confidence            77765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4.2e-48  Score=356.86  Aligned_cols=232  Identities=27%  Similarity=0.390  Sum_probs=197.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+||||||++|||+++|++|+++|++|++++|+.++          ..+.+++.+.++.++++|+++++++++++
T Consensus         1 g~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~Dls~~~~i~~~~   70 (241)
T d2a4ka1           1 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERL----------LAEAVAALEAEAIAVVADVSDPKAVEAVF   70 (241)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHHHHHTCCSSEEEEECCTTSHHHHHHHH
T ss_pred             CcCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----------HHHHHHHcCCceEEEEecCCCHHHHHHHH
Confidence            47999999999999999999999999999999999998753          44556667889999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||++|+||||||.....++.                                                      
T Consensus        71 ~~i~~~~g~iDiLinnAg~~~~~~~~------------------------------------------------------   96 (241)
T d2a4ka1          71 AEALEEFGRLHGVAHFAGVAHSALSW------------------------------------------------------   96 (241)
T ss_dssp             HHHHHHHSCCCEEEEGGGGTTTTC--------------------------------------------------------
T ss_pred             HHHHHHhCCccEeccccccccccchh------------------------------------------------------
Confidence            99999999999999999987654443                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.+++.++|+++|+|+++  +.|+++||.+....   +++..|+++|+|+++|+|+||+||
T Consensus        97 -----~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a~~~~---~~~~~Y~~sK~al~~lt~~lA~el  166 (241)
T d2a4ka1          97 -----NLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVAGLGA---FGLAHYAAGKLGVVGLARTLALEL  166 (241)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCTTCCH---HHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred             -----hhhccccccccccccccccccccccccccccc--cceeeccccccccc---cCccccchhhHHHHHHHHHHHHHH
Confidence                 89999999999999999999999999998765  56777777665433   788999999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCC------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGG------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +++|||||+|+||+ +.|++.+...+.      ...|..|+.+|+|||++++||+|+.++|+||+.+ +|||+.
T Consensus       167 ~~~gIrvN~I~PG~-v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         167 ARKGVRVNVLLPGL-IQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             TTTTCEEEEEEECS-BCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hHhCCEEeeeccCc-CCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            99999999999996 566544322110      1236678889999999999999999999999999 777753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-47  Score=356.45  Aligned_cols=239  Identities=19%  Similarity=0.270  Sum_probs=198.6

Q ss_pred             cccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113           5 GKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         5 ~~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .+|+||++|||||++  |||+++|++|+++|++|++++|+++.        .+..++....+++..++++|+++++++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   75 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL--------RPEAEKLAEALGGALLFRADVTQDEELDA   75 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGG--------HHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHH--------HHHHHHhhhccCcccccccccCCHHHHHH
Confidence            479999999999886  99999999999999999999987542        23345555666778889999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++++.++||+||+||||||+.......                                                    
T Consensus        76 ~~~~~~~~~g~iDilVnnag~~~~~~~~----------------------------------------------------  103 (256)
T d1ulua_          76 LFAGVKEAFGGLDYLVHAIAFAPREAME----------------------------------------------------  103 (256)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHS----------------------------------------------------
T ss_pred             HHHHHHHhcCCceEEEeccccccccccc----------------------------------------------------
Confidence            9999999999999999999986432211                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                         .++.+.+.++|+.++++|+.+++.++|+++|+|+++  |+||++||..+..+  .+++.+|++||+|+.+|+|++|.
T Consensus       104 ---~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~ltr~lA~  176 (256)
T d1ulua_         104 ---GRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKV--VPKYNVMAIAKAALEASVRYLAY  176 (256)
T ss_dssp             ---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSB--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ---cchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCC--CCCchHHHHHHHHHHHHHHHHHH
Confidence               122378889999999999999999999999999764  89999999999877  58899999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ||+++|||||+|+||+ +.|++........        ..|..|+.+|||||++++||+|+.++|+||+.| +|||+.
T Consensus       177 ela~~gIrVN~I~PG~-i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         177 ELGPKGVRVNAISAGP-VRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             HHGGGTCEEEEEEECC-C----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhcccCCEEeeeccce-eeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence            9999999999999996 5665544332211        136678899999999999999999999999999 777753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.8e-47  Score=352.90  Aligned_cols=227  Identities=16%  Similarity=0.190  Sum_probs=192.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      |||||||++|||+++|++|+++|++|++++|+.+.++       ++....      ..+..+|++++++++++++++.++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~-------~~~~~~------~~~~~~dv~~~~~~~~~~~~~~~~   68 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD-------ELEAFA------ETYPQLKPMSEQEPAELIEAVTSA   68 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH-------HHHHHH------HHCTTSEECCCCSHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-------HHHhhh------CcEEEeccCCHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999876532       222211      124578999999999999999999


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                      ||+||+||||||+.....                                                          ++.+
T Consensus        69 ~G~iDiLVnNAg~~~~~~----------------------------------------------------------~~~~   90 (252)
T d1zmta1          69 YGQVDVLVSNDIFAPEFQ----------------------------------------------------------PIDK   90 (252)
T ss_dssp             HSCCCEEEEECCCCCCCC----------------------------------------------------------CGGG
T ss_pred             cCCCCEEEECCcCCCCCC----------------------------------------------------------Chhh
Confidence            999999999999764322                                                          2238


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeE
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA  250 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~  250 (406)
                      .+.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.||+++|||
T Consensus        91 ~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~ela~~gIr  168 (252)
T d1zmta1          91 YAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP--WKELSTYTSARAGACTLANALSKELGEYNIP  168 (252)
T ss_dssp             SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCC
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc--cccccccccccccHHHHHHHHHHHhcccCcE
Confidence            89999999999999999999999999999999999999999999877  4788999999999999999999999999999


Q ss_pred             EEEecchhhhhHHHHHHhc------CC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         251 VNALWPRTAIYTAAIEMLT------GG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       251 vn~v~PG~~~~t~~~~~~~------~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ||+|+||+ +.|++.....      ..        ...|..|+.+|||||++++||+|+.++|+|||.| +|||+.
T Consensus       169 VN~I~PG~-i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         169 VFAIGPNY-LHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             EEEEEESS-BCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             EEEEecCC-CcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            99999996 5553321110      00        1125678889999999999999999999999999 777764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.3e-47  Score=350.52  Aligned_cols=221  Identities=22%  Similarity=0.282  Sum_probs=188.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.              +++.+.  .++.+|+++.      ++.
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~--------------l~~~~~--~~~~~Dv~~~------~~~   59 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL--------------LKRSGH--RYVVCDLRKD------LDL   59 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--------------HHHTCS--EEEECCTTTC------HHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--------------HHhcCC--cEEEcchHHH------HHH
Confidence            789999999999999999999999999999999997542              233333  4577999864      456


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.+++|+||+||||||+....+.                                                         
T Consensus        60 ~~~~~g~iD~lVnnAG~~~~~~~---------------------------------------------------------   82 (234)
T d1o5ia_          60 LFEKVKEVDILVLNAGGPKAGFF---------------------------------------------------------   82 (234)
T ss_dssp             HHHHSCCCSEEEECCCCCCCBCG---------------------------------------------------------
T ss_pred             HHHHhCCCcEEEecccccCCcch---------------------------------------------------------
Confidence            77788999999999997654333                                                         


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                        .+++.++|++++++|+.++++++|+++|+|++++.|+||+++|..+..+  .++...|++||+|+.+|+|++|.||++
T Consensus        83 --~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~--~~~~~~Y~asKaal~~ltk~lA~ela~  158 (234)
T d1o5ia_          83 --DELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP--IENLYTSNSARMALTGFLKTLSFEVAP  158 (234)
T ss_dssp             --GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             --hhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccc--ccccccchhHHHHHHHHHHHHHHHhcc
Confidence              3899999999999999999999999999999999999999999988876  478999999999999999999999999


Q ss_pred             CCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         247 DNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +|||||+|+||+ +.|++.+...+.       ...|..|+.+|||+|++++||+|+.++|+|||.| +|||++
T Consensus       159 ~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         159 YGITVNCVAPGW-TETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             GTEEEEEEEECS-BCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCeEEeecccCc-cchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcccc
Confidence            999999999996 555554433221       1246778899999999999999999999999999 777764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.9e-46  Score=350.88  Aligned_cols=237  Identities=20%  Similarity=0.325  Sum_probs=206.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.++      .++++.++++..+.++.++.+|+++++++++++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~------~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~   87 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE------SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF   87 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchH------HHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHH
Confidence            57999999999999999999999999999999999988653      245677788888999999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+.+|+||++|||+|.....+..                                                      
T Consensus        88 ~~~~~~~g~idilV~nag~~~~~~~~------------------------------------------------------  113 (272)
T d1g0oa_          88 EEAVKIFGKLDIVCSNSGVVSFGHVK------------------------------------------------------  113 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGG------------------------------------------------------
T ss_pred             HHHHHHhCCCCccccccccchhhhhh------------------------------------------------------
Confidence            99999999999999999987655433                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.+++.++|+++|+|+++  |++++++|..+.... .+++..|++||+|+++|+|++|.||
T Consensus       114 -----~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~-~~~~~~Y~asKaal~~ltk~lA~e~  185 (272)
T d1g0oa_         114 -----DVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKA-VPKHAVYSGSKGAIETFARCMAIDM  185 (272)
T ss_dssp             -----GCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSS-CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhhhhHHHHHhhhccceeeeeccccccccccc--ccccccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHh
Confidence                 88999999999999999999999999999875  788899888765433 4778899999999999999999999


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhcCCC-------------------cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLTGGS-------------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~~~~-------------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      +++|||||+|+||+ +.|++.+......                   ..|..|+.+|+|||++++||+|+.++|+||+.|
T Consensus       186 ~~~gIrVN~I~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i  264 (272)
T d1g0oa_         186 ADKKITVNVVAPGG-IKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVI  264 (272)
T ss_dssp             GGGTCEEEEEEECC-BSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             chhCeEEEEEccCC-cCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceE
Confidence            99999999999996 6676665543211                   124578889999999999999999999999999


Q ss_pred             -EehhH
Q psy6113         306 -IDDEV  310 (406)
Q Consensus       306 -~d~g~  310 (406)
                       +|||.
T Consensus       265 ~vDGG~  270 (272)
T d1g0oa_         265 GIDGGA  270 (272)
T ss_dssp             EESTTC
T ss_pred             eECCCC
Confidence             77764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-46  Score=348.35  Aligned_cols=224  Identities=25%  Similarity=0.355  Sum_probs=193.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +||++|||||++|||+++|++|+++|++|++++|+.+++       ++..+++...  +.++.++.+|++++++++++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG-------VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR   74 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHH
Confidence            699999999999999999999999999999999997753       3455555443  4578999999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      ++.++||+||+||||||+..                                                            
T Consensus        75 ~~~~~~G~iDilVnnAg~~~------------------------------------------------------------   94 (254)
T d2gdza1          75 KVVDHFGRLDILVNNAGVNN------------------------------------------------------------   94 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCC------------------------------------------------------------
T ss_pred             HHHHHcCCcCeecccccccc------------------------------------------------------------
Confidence            99999999999999999642                                                            


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH--H
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG--M  240 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~--l  240 (406)
                             .++|++++++|+.+++.+++.++|+|.+++   .|+||++||.++..+  .+++++|++||+|+.+|+|+  |
T Consensus        95 -------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~ltrs~al  165 (254)
T d2gdza1          95 -------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP--VAQQPVYCASKHGIVGFTRSAAL  165 (254)
T ss_dssp             -------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC--CCCccchHHHHHHHHHHHHHHHH
Confidence                   245889999999999999999999998875   478999999999987  48899999999999999997  7


Q ss_pred             HHhhcCCCeEEEEecchhhhhHHHHHHhcCCC--------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-
Q psy6113         241 AEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS--------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-  305 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-  305 (406)
                      +.|++++|||||+|+||+ ++|++.+......              ..|..++.+|||||++++||+|++  ++||+.+ 
T Consensus       166 a~e~~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~--~itG~~i~  242 (254)
T d2gdza1         166 AANLMNSGVRLNAICPGF-VNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD--ALNGAIMK  242 (254)
T ss_dssp             HHHHHTCCEEEEEEEESC-BSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT--TCSSCEEE
T ss_pred             HHHhcCCCEEEEEEEcCC-CCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCC--CCCCCEEE
Confidence            889999999999999996 6787776654321              013457789999999999999964  5999999 


Q ss_pred             EehhH
Q psy6113         306 IDDEV  310 (406)
Q Consensus       306 ~d~g~  310 (406)
                      +|||.
T Consensus       243 VdGG~  247 (254)
T d2gdza1         243 ITTSK  247 (254)
T ss_dssp             EETTT
T ss_pred             ECCCC
Confidence            78775

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-46  Score=342.06  Aligned_cols=231  Identities=22%  Similarity=0.319  Sum_probs=192.5

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.+|+||++|||||++|||+++|+.|+++|++|++++|+++++++           +.+ ...+....+|+.+.+.++  
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~-----------~~~-~~~~~~~~~d~~~~~~~~--   66 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----------LEK-YPGIQTRVLDVTKKKQID--   66 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG-----------GGG-STTEEEEECCTTCHHHHH--
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHh-ccCCceeeeecccccccc--
Confidence            567999999999999999999999999999999999998764332           222 234667778888766544  


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                        ...+.++++|+||||||.....++.                                                     
T Consensus        67 --~~~~~~~~id~lVn~ag~~~~~~~~-----------------------------------------------------   91 (245)
T d2ag5a1          67 --QFANEVERLDVLFNVAGFVHHGTVL-----------------------------------------------------   91 (245)
T ss_dssp             --HHHHHCSCCSEEEECCCCCCCBCGG-----------------------------------------------------
T ss_pred             --ccccccccceeEEecccccCCCChh-----------------------------------------------------
Confidence              4556678999999999987654433                                                     


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                            +.+.++|+..+++|+.+++.++|+++|+|.+++.|+||++||..+.... .+++.+|++||+|+++|+|+||.|
T Consensus        92 ------~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-~~~~~~Y~~sKaal~~l~r~lA~e  164 (245)
T d2ag5a1          92 ------DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG-VVNRCVYSTTKAAVIGLTKSVAAD  164 (245)
T ss_dssp             ------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCC-ccchhHHHHHHHHHHHHHHHHHHH
Confidence                  8899999999999999999999999999999999999999998775422 478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC------------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS------------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~------------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      |+++|||||+|+||+ ++|++........            ..|..|+.+|+|+|+++.||++++++++||+.+ +|||+
T Consensus       165 ~~~~gIrvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         165 FIQQGIRCNCVCPGT-VDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HGGGTEEEEEEEESC-EECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             hhhhCcEEEEEeece-eechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCc
Confidence            999999999999996 6666654332111            135677889999999999999999999999999 78876


Q ss_pred             H
Q psy6113         311 L  311 (406)
Q Consensus       311 ~  311 (406)
                      +
T Consensus       244 s  244 (245)
T d2ag5a1         244 S  244 (245)
T ss_dssp             G
T ss_pred             C
Confidence            4

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=3.6e-44  Score=340.22  Aligned_cols=239  Identities=21%  Similarity=0.253  Sum_probs=200.9

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHH
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      ..+|+||+||||||++|||+++|++|+++|++|++++|+.+++       ++..+++. ..+.++.++.+|+++++++++
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l-------~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~   92 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL-------KATAEQISSQTGNKVHAIQCDVRDPDMVQN   92 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHHHHHHSSCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-------HHHHHHHHHhcCCceEEEEecccChHHHHH
Confidence            4589999999999999999999999999999999999997653       34455443 457789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++.+.++++++|+||||||.....+..                                                    
T Consensus        93 ~~~~~~~~~g~iDilvnnAg~~~~~~~~----------------------------------------------------  120 (294)
T d1w6ua_          93 TVSELIKVAGHPNIVINNAAGNFISPTE----------------------------------------------------  120 (294)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCCCCSCGG----------------------------------------------------
T ss_pred             Hhhhhhhhccccchhhhhhhhccccccc----------------------------------------------------
Confidence            9999999999999999999987655443                                                    


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHh-cCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKK-SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                             +.+.++|...+.+|+.+.+.+.+.+.+.+.. +..+.|++++|..+..+  .+++.+|++||+|+.+|+|++|
T Consensus       121 -------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~--~~~~~~YsasKaal~~ltk~lA  191 (294)
T d1w6ua_         121 -------RLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG--SGFVVPSASAKAGVEAMSKSLA  191 (294)
T ss_dssp             -------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             -------cchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc--ccccchHHHHHHHHHHHHHHHH
Confidence                   7888999999999999999999888777665 45677888888877765  4788999999999999999999


Q ss_pred             HhhcCCCeEEEEecchhhhhHHHHHHhcCCC---------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         242 EEFKGDNIAVNALWPRTAIYTAAIEMLTGGS---------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       242 ~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~---------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      .|++++|||||+|+||+ +.|++........         ..|..|+.+|+|+|++++||+|+.++|+||+.| +|||..
T Consensus       192 ~ela~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         192 AEWGKYGMRFNVIQPGP-IKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             HHHGGGTEEEEEEEECC-BCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHhHhCeEEEEEccCc-cccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence            99999999999999996 5665544332221         135678899999999999999999999999999 888854

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-44  Score=329.68  Aligned_cols=219  Identities=21%  Similarity=0.316  Sum_probs=193.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++       ++++.+++...+.++.++.||++|++++++++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~-------l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG-------LEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            47999999999999999999999999999999999999875       45678888888999999999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.+++|++|+||||||+.......                                                      
T Consensus        76 ~~i~~~~g~idilinnag~~~~~~~~------------------------------------------------------  101 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVYTSDLF------------------------------------------------------  101 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCG------------------------------------------------------
T ss_pred             HHHHHHcCCCceeEeecccccccccc------------------------------------------------------
Confidence            99999999999999999987665544                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..+  .+++++|++||+|+.+|+++|+.|+
T Consensus       102 -----~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~~~~~La~El  174 (244)
T d1yb1a_         102 -----ATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS--VPFLLAYCSSKFAAVGFHKTLTDEL  174 (244)
T ss_dssp             -----GGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC--CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence                 788899999999999999999999999999999999999999999987  5889999999999999999999998


Q ss_pred             cC---CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCC
Q psy6113         245 KG---DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       245 ~~---~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      ++   +||+||+|+||+ +.|++.+    ....+..+..+||++|+.++......
T Consensus       175 ~~~~~~gI~V~~i~PG~-v~T~~~~----~~~~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         175 AALQITGVKTTCLCPNF-VNTGFIK----NPSTSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHTTCTTEEEEEEEETH-HHHCSTT----CTHHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HhhcCCCEEEEEEEcCC-CCChhhh----CcCccccCCCCHHHHHHHHHHHHhcC
Confidence            76   589999999996 6774432    22234456779999999998876443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.9e-43  Score=328.06  Aligned_cols=232  Identities=19%  Similarity=0.200  Sum_probs=195.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHH---cCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAK---DGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHA   79 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~---~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~   79 (406)
                      ..|+||+||||||++|||+++|++|++   +|++|++++|+.++       ++++.+++...  +.++.++.||++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~-------l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~   74 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM-------LRQLKEELGAQQPDLKVVLAAADLGTEAG   74 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH-------HHHHHHHHHHHCTTSEEEEEECCTTSHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHH-------HHHHHHHHHhhcCCceEEEEEccCCCHHH
Confidence            479999999999999999999999997   79999999998765       44566777654  5589999999999999


Q ss_pred             HHHHHHHHHHh----cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcce
Q psy6113          80 VQSAVNAAVDK----FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDI  155 (406)
Q Consensus        80 v~~~~~~i~~~----~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~  155 (406)
                      ++++++.+.+.    ++.+|++|||||...+...                                              
T Consensus        75 v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~----------------------------------------------  108 (259)
T d1oaaa_          75 VQRLLSAVRELPRPEGLQRLLLINNAATLGDVSK----------------------------------------------  108 (259)
T ss_dssp             HHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSS----------------------------------------------
T ss_pred             HHHHHHHHHHhhhhccCceEEEEecccccccCCC----------------------------------------------
Confidence            99999998773    4579999999997654321                                              


Q ss_pred             EeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC--CCeEEEeCCCCCCCCCccCCchhhhHhhHHH
Q psy6113         156 LVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN--HAHILNISPPLNLNPFWFKNHVAYTISKYGM  233 (406)
Q Consensus       156 li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal  233 (406)
                                .++.+.+.++|++++++|+.++++++|+++|+|++++  .|+||++||..+..+  .++++.|++||+|+
T Consensus       109 ----------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal  176 (259)
T d1oaaa_         109 ----------GFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP--YKGWGLYCAGKAAR  176 (259)
T ss_dssp             ----------CGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC--CTTCHHHHHHHHHH
T ss_pred             ----------CccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC--CccchHHHHHHHHH
Confidence                      1234889999999999999999999999999999875  589999999999987  58899999999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCc-----------ccccccCChhhHHHHHHHhhcCCCCCccc
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSA-----------DAKATSRKPEIMADAAYYILSSNPPSLTG  302 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~-----------~~~~~~~~pe~vA~~v~~L~s~~~~~~tG  302 (406)
                      ++|+|+||.|  ++|||||+|+||+ +.|++.+.......           .+..+..+|+|+|+.++||+++ ++|+||
T Consensus       177 ~~lt~~la~e--~~gIrVn~v~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~-~s~~TG  252 (259)
T d1oaaa_         177 DMLYQVLAAE--EPSVRVLSYAPGP-LDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQSG  252 (259)
T ss_dssp             HHHHHHHHHH--CTTEEEEEEECCS-BSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCTT
T ss_pred             HHHHHHHHhC--CCCCEEEEEEcCC-CCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhh-ccCCCC
Confidence            9999999999  6799999999996 66766554322111           1345678999999999999986 569999


Q ss_pred             eEE
Q psy6113         303 QFL  305 (406)
Q Consensus       303 ~~i  305 (406)
                      ++|
T Consensus       253 ~~i  255 (259)
T d1oaaa_         253 AHV  255 (259)
T ss_dssp             EEE
T ss_pred             CeE
Confidence            987

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.6e-42  Score=321.66  Aligned_cols=227  Identities=15%  Similarity=0.150  Sum_probs=189.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH--cCCeeeeeeecCC-ChHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED--AGGNCLPCIVDIR-DEHAVQ   81 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~--~g~~~~~~~~Dl~-~~~~v~   81 (406)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++.+       + ..++..  .+.++.++.+|++ +.++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~-------~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~   72 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-------A-LAELKAINPKVNITFHTYDVTVPVAESK   72 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH-------H-HHHHHHHCTTSEEEEEECCTTSCHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHH-------H-HHHHHhhCCCCCEEEEEeecCCCHHHHH
Confidence            5799999999999999999999999999999999999877522       2 233322  3458999999998 677899


Q ss_pred             HHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      ++++++.+++|+||+||||||.                                                          
T Consensus        73 ~~~~~~~~~~g~iDilvnnAG~----------------------------------------------------------   94 (254)
T d1sbya1          73 KLLKKIFDQLKTVDILINGAGI----------------------------------------------------------   94 (254)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC----------------------------------------------------------
T ss_pred             HHHHHHHHHcCCCCEEEeCCCC----------------------------------------------------------
Confidence            9999999999999999999994                                                          


Q ss_pred             ccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC---CCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHH
Q psy6113         162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN---HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~  238 (406)
                               .+.++|++++++|+.|+++++++++|+|.+++   .|+||++||..+..+  .+++.+|++||+|+.+|++
T Consensus        95 ---------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~--~~~~~~Y~asKaal~~~t~  163 (254)
T d1sbya1          95 ---------LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA--IHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             ---------CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--CTTSHHHHHHHHHHHHHHH
T ss_pred             ---------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC--CCCCHHHHHHHHHHHHHHH
Confidence                     33567999999999999999999999998763   589999999999987  5889999999999999999


Q ss_pred             HHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcc--------cccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         239 GMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSAD--------AKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~--------~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +|+.|++++|||||+|+||+ +.|++.+........        ...+..+||++|+.++++.+.   ..||+++ +|+|
T Consensus       164 ~la~el~~~gIrVn~I~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~---~~tG~vi~vdgG  239 (254)
T d1sbya1         164 SLAKLAPITGVTAYSINPGI-TRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA---NKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHSEEEEEEEECS-EESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH---CCTTCEEEEETT
T ss_pred             HHHhhccccCeEEEEEEeCC-CcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC---CCCCCEEEECCC
Confidence            99999999999999999996 678776654322100        112345799999999888754   4699988 8888


Q ss_pred             HHH
Q psy6113         310 VLK  312 (406)
Q Consensus       310 ~~~  312 (406)
                      .+.
T Consensus       240 ~l~  242 (254)
T d1sbya1         240 TLE  242 (254)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            653

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-42  Score=318.83  Aligned_cols=232  Identities=24%  Similarity=0.329  Sum_probs=194.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +|+||+||||||++|||+++|++|+++|++|++++|+.+++          .+..++.+.......+|+.+.+.++..+.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   71 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG----------EAQAKKLGNNCVFAPADVTSEKDVQTALA   71 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH----------HHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------HHHHHHhCCCccccccccccccccccccc
Confidence            68999999999999999999999999999999999998753          22334457788899999999999999999


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+...++.+|.+++|+++......                                                     ...
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------~~~   98 (248)
T d2o23a1          72 LAKGKFGRVDVAVNCAGIAVASKT-----------------------------------------------------YNL   98 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCS-----------------------------------------------------EET
T ss_pred             ccccccccccccccccccccCCCc-----------------------------------------------------ccc
Confidence            999999999999999987654332                                                     223


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc------CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS------NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~------~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                      .++.+.+.++|++++++|+.++|+++|+++|+|..+      +.|+||++||..+..+  .+++++|++||+|+++|+|+
T Consensus        99 ~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~  176 (248)
T d2o23a1          99 KKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG--QVGQAAYSASKGGIVGMTLP  176 (248)
T ss_dssp             TTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC--CCCchHHHHHHHHHHHHHHH
Confidence            344578899999999999999999999999998754      5689999999999877  48899999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcc------c-ccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSAD------A-KATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~------~-~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ||.|++++|||||+|+||+ +.|++.+...+....      | ..|+.+|||||++++||++  ++|+|||.|
T Consensus       177 la~e~~~~gIrvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s--~~~itGq~I  246 (248)
T d2o23a1         177 IARDLAPIGIRVMTIAPGL-FGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE--NPFLNGEVI  246 (248)
T ss_dssp             HHHHHGGGTEEEEEEEECC-BCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH--CTTCCSCEE
T ss_pred             HHHHhcccCcceeeeccCc-eecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CCCCCceEe
Confidence            9999999999999999996 667666554432211      2 2678899999999999997  579999988

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=328.05  Aligned_cols=232  Identities=21%  Similarity=0.237  Sum_probs=186.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|+||||||++|||+++|++|+++|++|+++++.....+. .+.+.+..+++...+.++.++.||++|+++++++++++.
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKT-QGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGG-THHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhh-hHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            5899999999999999999999999987666544333221 123444555555668899999999999999999999874


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +  |++|+||||||+.......                                                          
T Consensus        81 ~--g~idilvnnag~~~~~~~~----------------------------------------------------------  100 (285)
T d1jtva_          81 E--GRVDVLVCNAGLGLLGPLE----------------------------------------------------------  100 (285)
T ss_dssp             T--SCCSEEEECCCCCCCSCGG----------------------------------------------------------
T ss_pred             c--cchhhhhhccccccccccc----------------------------------------------------------
Confidence            3  8899999999987655443                                                          


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN  248 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g  248 (406)
                       +.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+  .+++..|++||+|+.+|+++|+.|++++|
T Consensus       101 -~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~--~~~~~~Y~asKaal~~l~~~la~El~~~g  177 (285)
T d1jtva_         101 -ALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG--LPFNDVYCASKFALEGLCESLAVLLLPFG  177 (285)
T ss_dssp             -GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             -chhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhhccC
Confidence             889999999999999999999999999999999999999999999987  47899999999999999999999999999


Q ss_pred             eEEEEecchhhhhHHHHHHhcCCCc-----------------------ccccccCChhhHHHHHHHhhcCC---CCCccc
Q psy6113         249 IAVNALWPRTAIYTAAIEMLTGGSA-----------------------DAKATSRKPEIMADAAYYILSSN---PPSLTG  302 (406)
Q Consensus       249 I~vn~v~PG~~~~t~~~~~~~~~~~-----------------------~~~~~~~~pe~vA~~v~~L~s~~---~~~~tG  302 (406)
                      ||||+|+||+ +.|++.+.......                       .+..+..+|||||+++++++...   .+|++|
T Consensus       178 IrVn~V~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g  256 (285)
T d1jtva_         178 VHLSLIECGP-VHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (285)
T ss_dssp             EEEEEEEECC-BCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             cEEEEEecCC-CCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence            9999999996 67766654332210                       01234679999999999998643   357777


Q ss_pred             eEE
Q psy6113         303 QFL  305 (406)
Q Consensus       303 ~~i  305 (406)
                      +.+
T Consensus       257 ~~~  259 (285)
T d1jtva_         257 ERF  259 (285)
T ss_dssp             STT
T ss_pred             HHH
Confidence            644

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=7.1e-41  Score=315.40  Aligned_cols=248  Identities=16%  Similarity=0.178  Sum_probs=189.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeee-----------------ee
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLP-----------------CI   71 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~-----------------~~   71 (406)
                      -|||||||++|||+++|++|+++|++|++++|+.++      ..++..+++... +.....                 ..
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   76 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA------EANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   76 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHH------HHHHHHHHHHhhcCCceEEEEeeccccccccccccccc
Confidence            479999999999999999999999999999887643      234455566544 333433                 45


Q ss_pred             ecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcC
Q psy6113          72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFG  151 (406)
Q Consensus        72 ~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  151 (406)
                      +|++++++++++++++.++||+||+||||||+..+.+..+.+.++|+....                             
T Consensus        77 ~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~-----------------------------  127 (284)
T d1e7wa_          77 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVG-----------------------------  127 (284)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC----------------------------------------
T ss_pred             ccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhh-----------------------------
Confidence            669999999999999999999999999999998877666444433321111                             


Q ss_pred             CcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHh------HhcCCCeEEEeCCCCCCCCCccCCchh
Q psy6113         152 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL------KKSNHAHILNISPPLNLNPFWFKNHVA  225 (406)
Q Consensus       152 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m------~~~~~g~Iv~vsS~~~~~~~~~~~~~~  225 (406)
                                      ..+.....|..++.+|+.++++++|.+.+.+      .+.+.++||+++|.....+  .+++.+
T Consensus       128 ----------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~--~~~~~~  189 (284)
T d1e7wa_         128 ----------------DREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--LLGYTI  189 (284)
T ss_dssp             ------------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC--CTTCHH
T ss_pred             ----------------hHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCC--ccceee
Confidence                            0133445677899999999999999988764      3445689999999998877  478999


Q ss_pred             hhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHH-----HHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCc
Q psy6113         226 YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTA-----AIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSL  300 (406)
Q Consensus       226 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~-----~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~  300 (406)
                      |++||+|+.+|+|+||.||+++|||||+|+||++..+.     ..+..... ..+..|+.+|+|+|++++||+|+.++|+
T Consensus       190 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~-~pl~~R~~~peeiA~~v~fL~S~~s~~i  268 (284)
T d1e7wa_         190 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSK-VPLYQRDSSAAEVSDVVIFLCSSKAKYI  268 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTT-CTTTTSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             eccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHHhCchhcCc
Confidence            99999999999999999999999999999999532211     11111111 1124788899999999999999999999


Q ss_pred             cceEE-EehhHH
Q psy6113         301 TGQFL-IDDEVL  311 (406)
Q Consensus       301 tG~~i-~d~g~~  311 (406)
                      ||+.| +|||+.
T Consensus       269 tG~~i~VDGG~s  280 (284)
T d1e7wa_         269 TGTCVKVDGGYS  280 (284)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCCeEEECcChh
Confidence            99999 787763

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-41  Score=313.96  Aligned_cols=222  Identities=22%  Similarity=0.301  Sum_probs=186.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKD-GANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .||||||||++|||+++|++|+++ |++|++++|+.++       ++++.+++++.+.++.++.||++|.++++++++++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~   75 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR-------GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFL   75 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH-------HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHH-------HHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHH
Confidence            367799999999999999999986 8999999999876       45678888888999999999999999999999999


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+++|+||+||||||+.......                                                         
T Consensus        76 ~~~~g~iDiLVnNAGi~~~~~~~---------------------------------------------------------   98 (275)
T d1wmaa1          76 RKEYGGLDVLVNNAGIAFKVADP---------------------------------------------------------   98 (275)
T ss_dssp             HHHHSSEEEEEECCCCCCCTTCC---------------------------------------------------------
T ss_pred             HHhcCCcEEEEEcCCcCCCCCcc---------------------------------------------------------
Confidence            99999999999999987655443                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC------------------------------
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP------------------------------  217 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~------------------------------  217 (406)
                        +.+.++|+.++++|+.|+++++++++|+|+++  |+||++||..+..+                              
T Consensus        99 --~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~  174 (275)
T d1wmaa1          99 --TPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFV  174 (275)
T ss_dssp             --SCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHH
T ss_pred             --cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhhcccccchhhhccccccch
Confidence              77788999999999999999999999999765  89999999654211                              


Q ss_pred             ---------CccCCchhhhHhhHHHHHHHHHHHHhhcC----CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhh
Q psy6113         218 ---------FWFKNHVAYTISKYGMSMCALGMAEEFKG----DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEI  284 (406)
Q Consensus       218 ---------~~~~~~~~Y~asKaal~~l~~~la~e~~~----~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~  284 (406)
                               ....+..+|++||+|+.+|++.+++||++    .||+||+|+||+ +.|++..         .....+|||
T Consensus       175 ~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~-v~T~m~~---------~~~~~~pee  244 (275)
T d1wmaa1         175 EDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGW-VRTDMAG---------PKATKSPEE  244 (275)
T ss_dssp             HHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCS-BCSTTTC---------TTCSBCHHH
T ss_pred             hcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccc-ccCCccc---------CcccCCHHH
Confidence                     00123457999999999999999999865    599999999997 5664321         123357999


Q ss_pred             HHHHHHHhh--cCCCCCccceEEEeh
Q psy6113         285 MADAAYYIL--SSNPPSLTGQFLIDD  308 (406)
Q Consensus       285 vA~~v~~L~--s~~~~~~tG~~i~d~  308 (406)
                      +|++++|++  ++....++|+++.+.
T Consensus       245 ~A~~~~~~a~~~~~~~~~~G~~~~~~  270 (275)
T d1wmaa1         245 GAETPVYLALLPPDAEGPHGQFVSEK  270 (275)
T ss_dssp             HTHHHHHHHSCCTTCCCCCSCEEETT
T ss_pred             HHHHHHHHHcCChhhcCCCeEEEECC
Confidence            999999997  456678899998654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-40  Score=308.91  Aligned_cols=239  Identities=15%  Similarity=0.185  Sum_probs=200.2

Q ss_pred             ccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++.        .+..+++....++...+.+|+++..++...
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL--------KGRVEEFAAQLGSDIVLQCDVAEDASIDTM   73 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT--------HHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH--------HHHHHHHHhhcCCcceeecccchHHHHHHH
Confidence            58999999999998  89999999999999999999998543        233455566667788899999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.++++|++||||+...........                                                  
T Consensus        74 ~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~--------------------------------------------------  103 (258)
T d1qsga_          74 FAELGKVWPKFDGFVHSIGFAPGDQLDGDY--------------------------------------------------  103 (258)
T ss_dssp             HHHHHTTCSSEEEEEECCCCCCGGGGSSCH--------------------------------------------------
T ss_pred             HHHhhhcccccceEEEeecccccccccccc--------------------------------------------------
Confidence            999999999999999999986544322111                                                  


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                          ......+.|...+.+|+.+.+.+.+++.|+|.++  +.||++||..+..+  .+++..|++||+|+++|+|++|.|
T Consensus       104 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~--~~~~~~Y~~sKaal~~ltr~lA~e  175 (258)
T d1qsga_         104 ----VNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERA--IPNYNVMGLAKASLEANVRYMANA  175 (258)
T ss_dssp             ----HHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ----cccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccC--CCCcHHHHHHHHHHHHHHHHHHHH
Confidence                1156678899999999999999999999999654  68999999988877  478899999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCCC--------cccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGGS--------ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~~--------~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      |+++|||||+|+||+ +.|++.+......        ..|..|+.+|||+|++++||+|+.++++||+.+ +|||+.
T Consensus       176 l~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         176 MGPEGVRVNAISAGP-IRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             HTTTTEEEEEEEECC-CCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hCccCceeecccccc-cccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence            999999999999996 6665543322111        135678899999999999999999999999999 777764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.9e-40  Score=315.87  Aligned_cols=234  Identities=15%  Similarity=0.137  Sum_probs=180.8

Q ss_pred             CCcEEEEec--CCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HH-----------cCCeee-----
Q psy6113           8 SGLTIFITG--ASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-ED-----------AGGNCL-----   68 (406)
Q Consensus         8 ~gk~alVTG--as~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~-----------~g~~~~-----   68 (406)
                      .+|++||||  +++|||+++|++|+++|++|++++|+.....       ...... .+           ......     
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI-------FMKNYKNGKFDNDMIIDKDKKMNILDMLPFD   73 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH-------HHHHHHTTTTTGGGEETTTEECCEEEEEECC
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh-------hhHHHHHHhhhhHHHHHHHhhhhhhhccccc
Confidence            379999999  5689999999999999999999987654210       000000 00           000111     


Q ss_pred             ---------------eeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEec
Q psy6113          69 ---------------PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA  133 (406)
Q Consensus        69 ---------------~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (406)
                                     ...+|+++.++++++++++.+.||+||+||||||......                         
T Consensus        74 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~-------------------------  128 (329)
T d1uh5a_          74 ASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQ-------------------------  128 (329)
T ss_dssp             TTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTT-------------------------
T ss_pred             ceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccC-------------------------
Confidence                           1235788999999999999999999999999999754311                         


Q ss_pred             cchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCC
Q psy6113         134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPL  213 (406)
Q Consensus       134 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~  213 (406)
                                                      .++.+++.++|++++++|+++++.++|+++|+|+++  |+||++||..
T Consensus       129 --------------------------------~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~--GsIv~iss~~  174 (329)
T d1uh5a_         129 --------------------------------KDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ--SSIISLTYHA  174 (329)
T ss_dssp             --------------------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGG
T ss_pred             --------------------------------CChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccc--cccccceeeh
Confidence                                            123488999999999999999999999999999764  8999999998


Q ss_pred             CCCCCccCC-chhhhHhhHHHHHHHHHHHHhhcC-CCeEEEEecchhhhhHHHHHHh-----------------------
Q psy6113         214 NLNPFWFKN-HVAYTISKYGMSMCALGMAEEFKG-DNIAVNALWPRTAIYTAAIEML-----------------------  268 (406)
Q Consensus       214 ~~~~~~~~~-~~~Y~asKaal~~l~~~la~e~~~-~gI~vn~v~PG~~~~t~~~~~~-----------------------  268 (406)
                      +..+  +|+ ...|++||+|+++|+|+||.||++ +|||||+|+||+ +.|.+.+..                       
T Consensus       175 ~~~~--~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~-i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~  251 (329)
T d1uh5a_         175 SQKV--VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP-LKSRAATAINKLNNTYENNTNQNKNRNRHDVH  251 (329)
T ss_dssp             GTSC--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC-CCCTTGGGCC----------------------
T ss_pred             hccc--ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCc-ccchhhhcccchhhhhhhhhhhhhcccccccc
Confidence            8876  354 467999999999999999999986 699999999996 544110000                       


Q ss_pred             ---------------cC--C-----------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         269 ---------------TG--G-----------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       269 ---------------~~--~-----------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                                     ..  .           ...|..|+.+|||||++++||+|+.++|+|||.| +|||+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDGG~  322 (329)
T d1uh5a_         252 NIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGL  322 (329)
T ss_dssp             --------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECCCc
Confidence                           00  0           0126678899999999999999999999999999 66664

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.1e-39  Score=299.78  Aligned_cols=224  Identities=20%  Similarity=0.219  Sum_probs=178.4

Q ss_pred             cEEEEecCCchHHHHHHHHHH---HcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAA---KDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La---~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |++|||||++|||+++|++|+   ++|++|++++|+.+++++        .+++.+.+.++.++.||++|++++++++++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   74 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE--------LEDLAKNHSNIHILEIDLRNFDAYDKLVAD   74 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH--------HHHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH--------HHHHHhcCCcEEEEEEEeccHHHHHHHHhh
Confidence            789999999999999999996   579999999999887542        234455577899999999999999999999


Q ss_pred             HHH--hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          87 AVD--KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        87 i~~--~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+  .+++||+||||||+.......                                                      
T Consensus        75 i~~~~~~~~iDiLvnNAg~~~~~~~~------------------------------------------------------  100 (248)
T d1snya_          75 IEGVTKDQGLNVLFNNAGIAPKSARI------------------------------------------------------  100 (248)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCG------------------------------------------------------
T ss_pred             hHHHhhcCCcceEEeeccccccCccc------------------------------------------------------
Confidence            854  678999999999986543322                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-----------CCCeEEEeCCCCCCCC-CccCCchhhhHhhHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-----------NHAHILNISPPLNLNP-FWFKNHVAYTISKYG  232 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----------~~g~Iv~vsS~~~~~~-~~~~~~~~Y~asKaa  232 (406)
                          .+.+.++|++++++|+.|++.++++++|+|+++           +.|+||+++|..+... .+.+++.+|++||+|
T Consensus       101 ----~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaa  176 (248)
T d1snya_         101 ----TAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSA  176 (248)
T ss_dssp             ----GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHH
T ss_pred             ----ccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHH
Confidence                378899999999999999999999999999875           3689999999876643 234678899999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE-Eehh
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDE  309 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g  309 (406)
                      +.+|++++|.|++++||+||+|+||+ +.|++....        .+ .++++.++.++.++.......||+++ +||+
T Consensus       177 l~~lt~~la~e~~~~gI~vn~v~PG~-v~T~m~~~~--------~~-~~~~~~~~~i~~~i~~l~~~~tG~~i~~dG~  244 (248)
T d1snya_         177 LNAATKSLSVDLYPQRIMCVSLHPGW-VKTDMGGSS--------AP-LDVPTSTGQIVQTISKLGEKQNGGFVNYDGT  244 (248)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEECCCS-BCSTTTCTT--------CS-BCHHHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             HHHHHHHHHHHhCCCCeEEEEcCCCc-ccCCccccc--------CC-CCchHHHHHHHHHHHhcCccCCCcEEEECCe
Confidence            99999999999999999999999996 666543211        11 23334444444444444456789998 5553

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.5e-39  Score=295.41  Aligned_cols=216  Identities=11%  Similarity=0.084  Sum_probs=185.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +||++|||||++|||+++|++|+++|++|++++|+.....                 .....+.+|.++.++++.+.+.+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~   63 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------SASVIVKMTDSFTEQADQVTAEV   63 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------SEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------cccceeecccCcHHHHHHHHHHH
Confidence            5899999999999999999999999999999998775422                 23456778889999999988888


Q ss_pred             HHhcC--CccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          88 VDKFG--GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        88 ~~~~g--~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                      .+.++  +||+||||||........                                                       
T Consensus        64 ~~~~~~~~iD~lInnAG~~~~~~~~-------------------------------------------------------   88 (236)
T d1dhra_          64 GKLLGDQKVDAILCVAGGWAGGNAK-------------------------------------------------------   88 (236)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTT-------------------------------------------------------
T ss_pred             HHHhCCCCceEEEECCcccccccch-------------------------------------------------------
Confidence            87754  699999999965433222                                                       


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK  245 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  245 (406)
                         .+.+.++|++++++|+.++++++++++|+|+++  |+||++||.++..+  .+++.+|++||+|+++|+|+||.|++
T Consensus        89 ---~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~la~El~  161 (236)
T d1dhra_          89 ---SKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDG--TPGMIGYGMAKGAVHQLCQSLAGKNS  161 (236)
T ss_dssp             ---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHTSTTS
T ss_pred             ---hcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCC--ccCCcccHHHHHHHHHHHHHHHHHhc
Confidence               367789999999999999999999999999764  89999999999877  48899999999999999999999998


Q ss_pred             --CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         246 --GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       246 --~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                        ++|||||+|+||+ ++|++.+...+.  .+..++.+|+++|+.++||+++.+.++||+++
T Consensus       162 ~~~~gI~vn~v~PG~-v~T~~~~~~~~~--~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         162 GMPSGAAAIAVLPVT-LDTPMNRKSMPE--ADFSSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             SCCTTCEEEEEEESC-EECHHHHHHSTT--SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             cCCCcEEEEEEEecc-CcCCcchhhCcc--chhhcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence              5899999999996 778776655443  23456778999999999999999999999876

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-38  Score=292.56  Aligned_cols=222  Identities=22%  Similarity=0.240  Sum_probs=181.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +|+||||||++|||+++|++|+++|++|++++|+.+..                   +....++|+++......+.....
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-------------------~~~~~~~d~~~~~~~~~~~~~~~   61 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------------DLIYVEGDVTREEDVRRAVARAQ   61 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-------------------SSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-------------------cceEeeccccchhhhHHHHHhhh
Confidence            59999999999999999999999999999999987642                   35677899999999999998887


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +.+. .+.+++++++.......                                                       ...
T Consensus        62 ~~~~-~~~~~~~~~~~~~~~~~-------------------------------------------------------~~~   85 (241)
T d1uaya_          62 EEAP-LFAVVSAAGVGLAEKIL-------------------------------------------------------GKE   85 (241)
T ss_dssp             HHSC-EEEEEECCCCCCCCCSB-------------------------------------------------------CSS
T ss_pred             cccc-ccchhhhhhcccccccc-------------------------------------------------------ccc
Confidence            7654 45556666654322211                                                       112


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHH------hHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPY------LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~------m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      ...+.+.|++++++|+.+++.+++.+.+.      |.+++.|+||++||..+..+  .+++.+|++||+|+.+|+|+||.
T Consensus        86 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~  163 (241)
T d1uaya_          86 GPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG--QIGQAAYAASKGGVVALTLPAAR  163 (241)
T ss_dssp             SBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC--CCCchhhHHHHHHHHHHHHHHHH
Confidence            26778899999999999999999999998      55567899999999999877  47899999999999999999999


Q ss_pred             hhcCCCeEEEEecchhhhhHHHHHHhcCC-------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhH
Q psy6113         243 EFKGDNIAVNALWPRTAIYTAAIEMLTGG-------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEV  310 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~~~t~~~~~~~~~-------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~  310 (406)
                      ||+++|||||+|+||+ +.|++.......       ...+..|+.+|||||++++||+|  ++|+||+.| +|||+
T Consensus       164 ela~~gIrVN~V~PG~-i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~~~iTG~~i~VDGG~  236 (241)
T d1uaya_         164 ELAGWGIRVVTVAPGL-FDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE--NPMLNGEVVRLDGAL  236 (241)
T ss_dssp             HHGGGTEEEEEEEECS-CSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--CTTCCSCEEEESTTC
T ss_pred             HHhhcCCceeeecCCc-ccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CCCCCCCEEEECCcc
Confidence            9999999999999996 666655433211       11223678899999999999998  469999999 77775

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.3e-38  Score=298.52  Aligned_cols=238  Identities=17%  Similarity=0.182  Sum_probs=184.7

Q ss_pred             ccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++.        .+..+++...+....+..+|++++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~--------~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~   73 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL--------EKRVRPIAQELNSPYVYELDVSKEEHFKSL   73 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT--------HHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--------HHHHHHHHhhCCceeEeeecccchhhHHHH
Confidence            58999999999764  99999999999999999999998542        345667777788888999999999999999


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++++.+.+|++|++|||+|.........                                                    
T Consensus        74 ~~~~~~~~g~id~lV~nag~~~~~~~~~----------------------------------------------------  101 (274)
T d2pd4a1          74 YNSVKKDLGSLDFIVHSVAFAPKEALEG----------------------------------------------------  101 (274)
T ss_dssp             HHHHHHHTSCEEEEEECCCCCCGGGGSS----------------------------------------------------
T ss_pred             HHHHHHHcCCCCeEEeeccccccccccc----------------------------------------------------
Confidence            9999999999999999999865433220                                                    


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                         ++.+..++.+...+.++..+.+.+.+...+.+..  .+.|+++||.+...+  .+.+..|++||+|+.+|+|++|.|
T Consensus       102 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~~~~~~~--~~~~~~y~asK~al~~ltr~lA~e  174 (274)
T d2pd4a1         102 ---SLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKY--MAHYNVMGLAKAALESAVRYLAVD  174 (274)
T ss_dssp             ---CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccccccchhhhhhhcccccccccccccccccccc--Ccceeeecccccccc--cccchhhhHHHHHHHHHHHhhHHH
Confidence               1113444555555555665566665555544322  245666666665554  467889999999999999999999


Q ss_pred             hcCCCeEEEEecchhhhhHHHHHHhcCC--------CcccccccCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         244 FKGDNIAVNALWPRTAIYTAAIEMLTGG--------SADAKATSRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       244 ~~~~gI~vn~v~PG~~~~t~~~~~~~~~--------~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      ++++|||||+|+||+ +.|++.......        ...+..|+.+|+|||++++||+|+.++++||+.| +|||+.
T Consensus       175 ~~~~GIrvN~I~PG~-v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         175 LGKHHIRVNALSAGP-IRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHTTTCEEEEEEECC-CCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hcCcCceecccccCc-ccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence            999999999999995 555443322211        1235678899999999999999999999999999 777774

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=7.9e-38  Score=292.07  Aligned_cols=238  Identities=17%  Similarity=0.176  Sum_probs=190.5

Q ss_pred             CcccCCcEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHH-HHHcCCeeeeeeecCCChHHH
Q psy6113           4 TGKLSGLTIFITGA--SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKE-VEDAGGNCLPCIVDIRDEHAV   80 (406)
Q Consensus         4 ~~~l~gk~alVTGa--s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~-~~~~g~~~~~~~~Dl~~~~~v   80 (406)
                      +..|+||++|||||  ++|||+++|++|+++|++|++++|+.++          ..++ .+..+.+...++||+++++++
T Consensus         1 ~~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~----------~~~~~~~~~~~~~~~~~~dv~~~~~~   70 (268)
T d2h7ma1           1 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR----------LIQRITDRLPAKAPLLELDVQNEEHL   70 (268)
T ss_dssp             CCTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHH----------HHHHHHTTSSSCCCEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHH----------HHHHHHHHcCCceeeEeeeccccccc
Confidence            35789999999994  5799999999999999999999998753          2222 234577888999999999999


Q ss_pred             HHHHHHHHHhc---CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          81 QSAVNAAVDKF---GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        81 ~~~~~~i~~~~---g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      .++++.+.+.+   +.||++|||||+.......                                               
T Consensus        71 ~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~-----------------------------------------------  103 (268)
T d2h7ma1          71 ASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMG-----------------------------------------------  103 (268)
T ss_dssp             HHHHHHHHHHHCTTCCEEEEEECCCCCCGGGST-----------------------------------------------
T ss_pred             ccccchhhhccccCCCcceeeecccccCccccc-----------------------------------------------
Confidence            99999998765   6799999999976543322                                               


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHH
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~  237 (406)
                             ..++.+.+.++|.+.+.+|+.+.+...+.+.+++..   +.+++++|.....+  .+++..|+++|+|+.+|+
T Consensus       104 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~--~p~~~~y~~sK~a~~~lt  171 (268)
T d2h7ma1         104 -------INPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRA--MPAYNWMTVAKSALESVN  171 (268)
T ss_dssp             -------TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSC--CTTTHHHHHHHHHHHHHH
T ss_pred             -------cccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---cccccccccccccc--Ccccchhhccccchhhcc
Confidence                   123347889999999999999999999998877644   34455555555544  478899999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCc------------------cccc-ccCChhhHHHHHHHhhcCCCC
Q psy6113         238 LGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSA------------------DAKA-TSRKPEIMADAAYYILSSNPP  298 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~------------------~~~~-~~~~pe~vA~~v~~L~s~~~~  298 (406)
                      |++|.||+++|||||+|+||+ +.|++.+.+.....                  .|.. ++.+|+|+|++++||+|+.++
T Consensus       172 r~lA~e~~~~gIrVN~V~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~  250 (268)
T d2h7ma1         172 RFVAREAGKYGVRSNLVAAGP-IRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLP  250 (268)
T ss_dssp             HHHHHHHHTTTCEEEEEEECC-CCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCT
T ss_pred             ccchhhhhccCCcceEEecCC-CCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999999999995 66666554332211                  1223 378999999999999999999


Q ss_pred             CccceEE-EehhHH
Q psy6113         299 SLTGQFL-IDDEVL  311 (406)
Q Consensus       299 ~~tG~~i-~d~g~~  311 (406)
                      |+||+.| +|||+.
T Consensus       251 ~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         251 ATTGDIIYADGGAH  264 (268)
T ss_dssp             TCCSEEEEESTTGG
T ss_pred             CccCCEEEECcCcc
Confidence            9999999 787763

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.8e-38  Score=289.96  Aligned_cols=222  Identities=22%  Similarity=0.255  Sum_probs=175.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      |+.|++|||||++|||+++|++|+++|+  +|++.+|+.+++++          ..+..+.++.++.+|+++++++++++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~----------l~~~~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----------LKSIKDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----------HHTCCCTTEEEEECCTTCHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH----------HHHhhCCceEEEEEecCCHHHHHHHH
Confidence            4569999999999999999999999996  68888998875431          11224568999999999999999999


Q ss_pred             HHHHHhcCC--ccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          85 NAAVDKFGG--IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        85 ~~i~~~~g~--iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      +++.+.++.  ||+||||||+..+...                                                     
T Consensus        71 ~~i~~~~~~~~idilinnAG~~~~~~~-----------------------------------------------------   97 (250)
T d1yo6a1          71 SKVGEIVGSDGLSLLINNAGVLLSYGT-----------------------------------------------------   97 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCT-----------------------------------------------------
T ss_pred             HHHHHHhCCCCeEEEEEcCcccCCCCc-----------------------------------------------------
Confidence            999998874  9999999998654322                                                     


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-----------CCeEEEeCCCCCCCCC-----ccCCchhh
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-----------HAHILNISPPLNLNPF-----WFKNHVAY  226 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-----------~g~Iv~vsS~~~~~~~-----~~~~~~~Y  226 (406)
                           +.+.+.++|++++++|+.|+++++++++|+|++++           .+++++++|.......     +..+..+|
T Consensus        98 -----~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY  172 (250)
T d1yo6a1          98 -----NTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY  172 (250)
T ss_dssp             -----TSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHH
T ss_pred             -----cccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHH
Confidence                 23788999999999999999999999999998753           3789999886544321     12345679


Q ss_pred             hHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhcCCCCCccceEEE
Q psy6113         227 TISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLI  306 (406)
Q Consensus       227 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~  306 (406)
                      ++||+|+.+|+++|+.||+++||+||+|+||+ +.|+|...         ....+||+.++.++.++.......+|+++.
T Consensus       173 ~aSKaal~~l~~~la~el~~~gI~v~~i~PG~-v~T~m~~~---------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~  242 (250)
T d1yo6a1         173 RMSKAAINMFGRTLAVDLKDDNVLVVNFCPGW-VQTNLGGK---------NAALTVEQSTAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTCEEEEEECCC-C----------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCC-CCCCCCCC---------CCCCCHHHHHHHHHHHHhcCCCCCCeEEEC
Confidence            99999999999999999999999999999996 67765432         123579999999999998767778999884

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-38  Score=292.99  Aligned_cols=217  Identities=20%  Similarity=0.218  Sum_probs=186.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.+++       +++.+++. ..+..+..+.+|+++.+++..++
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l-------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   83 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL-------QKVVSHCLELGAASAHYIAGTMEDMTFAEQFV   83 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHHHhhhhcccchhhhhhhhhHHHHHHHH
Confidence            38999999999999999999999999999999999998753       34555544 45678889999999999999999


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.+.+.+|.+|+++||||........                                                      
T Consensus        84 ~~~~~~~g~~~~li~nag~~~~~~~~------------------------------------------------------  109 (269)
T d1xu9a_          84 AQAGKLMGGLDMLILNHITNTSLNLF------------------------------------------------------  109 (269)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCCCCCC------------------------------------------------------
T ss_pred             HHHHHHhCCccccccccccccccccc------------------------------------------------------
Confidence            99999999999999999987655444                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                           +.+.++|++++++|+.|++.++++++|+|+++ .|+||++||.++..+  .+++++|++||+|+.+|+++|+.|+
T Consensus       110 -----~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~--~p~~~~Y~asKaal~~~~~~La~El  181 (269)
T d1xu9a_         110 -----HDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVA--YPMVAAYSASKFALDGFFSSIRKEY  181 (269)
T ss_dssp             -----CSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCC--CCCchHHHHHHHHHHHHHHHHHHHh
Confidence                 78999999999999999999999999999865 599999999999987  5899999999999999999999999


Q ss_pred             cC--CCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHHhhc
Q psy6113         245 KG--DNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILS  294 (406)
Q Consensus       245 ~~--~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~L~s  294 (406)
                      ++  .||+||+|+||+ ++|++.......  .+.....+||++|..++....
T Consensus       182 ~~~~~~I~V~~v~PG~-v~T~~~~~~~~~--~~~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         182 SVSRVNVSITLCVLGL-IDTETAMKAVSG--IVHMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHTCCCEEEEEEECC-BCCHHHHHHSCG--GGGGGCBCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEEEecCc-CCCcHHHHhccC--CccccCCCHHHHHHHHHHHhh
Confidence            74  579999999996 677766554333  233445689999999887654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.6e-37  Score=288.02  Aligned_cols=243  Identities=21%  Similarity=0.255  Sum_probs=186.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCC----ChHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIR----DEHAVQSAV   84 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~----~~~~v~~~~   84 (406)
                      -|||||||++|||+++|++|+++|++|++++|+.++.      .+++.+++... +.+.....+|+.    ..+.+++++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA------AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII   75 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH------HHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHH
Confidence            3899999999999999999999999999999997642      23445555554 556666665554    467788889


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +++.++||+||+||||||+..+..........++                                              
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~----------------------------------------------  109 (266)
T d1mxha_          76 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGA----------------------------------------------  109 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCC-----------------------------------------------------
T ss_pred             HHHHHHhCCCCEEEECCccCCCCcccccccccch----------------------------------------------
Confidence            9999999999999999999876654422211111                                              


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-----CCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-----NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~  239 (406)
                        ...+.....+...+.+|+.+++...+...+.+...     ..+.+++++|..+..+  .+++..|++||+|+++|+|+
T Consensus       110 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~asKaal~~lt~~  185 (266)
T d1mxha_         110 --ADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP--LPGFCVYTMAKHALGGLTRA  185 (266)
T ss_dssp             ------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHH
T ss_pred             --hcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcccccc--CcchhhhhhhHHHHhhhHHH
Confidence              11255667788999999999999999988887653     3578889999888766  58899999999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhhhhHH------HHHHhcCCCcccccc-cCChhhHHHHHHHhhcCCCCCccceEE-EehhHH
Q psy6113         240 MAEEFKGDNIAVNALWPRTAIYTA------AIEMLTGGSADAKAT-SRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVL  311 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~~~t~------~~~~~~~~~~~~~~~-~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~  311 (406)
                      +|.|++++|||||+|+||+ +.|+      ..+.+...  .|..+ ..+|||+|++++||+|+.++|+||+.| +|||++
T Consensus       186 lA~e~~~~gIrVN~I~PG~-i~t~~~~~~~~~~~~~~~--~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         186 AALELAPRHIRVNAVAPGL-SLLPPAMPQETQEEYRRK--VPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             HHHHHGGGTEEEEEEEESS-BSCCSSSCHHHHHHHHTT--CTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCccCcEEEEeccCc-EeccccCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence            9999999999999999996 4431      11222221  23433 479999999999999999999999999 888865

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.4e-38  Score=298.91  Aligned_cols=245  Identities=18%  Similarity=0.170  Sum_probs=182.5

Q ss_pred             CCcccCCcEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc----------CC--e-e
Q psy6113           3 NTGKLSGLTIFITGASR--GIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA----------GG--N-C   67 (406)
Q Consensus         3 ~~~~l~gk~alVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~----------g~--~-~   67 (406)
                      ..++|+||++|||||++  |||+++|++|+++|++|++++|+....        .........          +.  . -
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALN--------IFETSLRRGKFDQSRVLPDGSLMEIK   73 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHH--------HHHHHHHTTTTTGGGBCTTSSBCCEE
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhh--------hhHHHHHHhhhhhhhhhhhhhhhhhh
Confidence            35789999999999875  999999999999999999999865310        001111100          00  0 0


Q ss_pred             eeeee--------------------cCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhcccc
Q psy6113          68 LPCIV--------------------DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG  127 (406)
Q Consensus        68 ~~~~~--------------------Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~  127 (406)
                      ....+                    |.++..+++++++++.++||+||+||||||......                   
T Consensus        74 ~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~-------------------  134 (297)
T d1d7oa_          74 KVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVS-------------------  134 (297)
T ss_dssp             EEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTT-------------------
T ss_pred             hhhhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccc-------------------
Confidence            11122                    245667788999999999999999999999753211                   


Q ss_pred             ceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEE
Q psy6113         128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL  207 (406)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv  207 (406)
                                                            .++.+.+.++|++++++|+.+++.++++++|+|.++  ++++
T Consensus       135 --------------------------------------~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--g~~~  174 (297)
T d1d7oa_         135 --------------------------------------KPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG--GASI  174 (297)
T ss_dssp             --------------------------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEE
T ss_pred             --------------------------------------cchhhhhcccccccccchhhhhhhhhhHHHHHhhcC--Ccce
Confidence                                                  223489999999999999999999999999999876  4566


Q ss_pred             EeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc-CCCeEEEEecchhhhhHHHHHHhcC--------CCcccccc
Q psy6113         208 NISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK-GDNIAVNALWPRTAIYTAAIEMLTG--------GSADAKAT  278 (406)
Q Consensus       208 ~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~~~t~~~~~~~~--------~~~~~~~~  278 (406)
                      .+++....... .+....|+++|+++.++++.++.|++ ++|||||+|+||+ +.|++.+....        ....|..|
T Consensus       175 ~~~~~~~~~~~-~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~PlgR  252 (297)
T d1d7oa_         175 SLTYIASERII-PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP-LGSRAAKAIGFIDTMIEYSYNNAPIQK  252 (297)
T ss_dssp             EEECGGGTSCC-TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC-CBCCCSSCCSHHHHHHHHHHHHSSSCC
T ss_pred             eeeehhhcccc-cccccceecccccccccccccchhccccceEEeccccccc-ccchhhhhccCCHHHHHHHHhCCCCCC
Confidence            66665544332 35677899999999999999999996 6899999999996 45533211000        01135678


Q ss_pred             cCChhhHHHHHHHhhcCCCCCccceEE-EehhHHHHhccc
Q psy6113         279 SRKPEIMADAAYYILSSNPPSLTGQFL-IDDEVLKAQHID  317 (406)
Q Consensus       279 ~~~pe~vA~~v~~L~s~~~~~~tG~~i-~d~g~~~~~~~~  317 (406)
                      +.+|||||++++||+|+.++|+|||.| +|||+ ...|..
T Consensus       253 ~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~-s~~G~~  291 (297)
T d1d7oa_         253 TLTADEVGNAAAFLVSPLASAITGATIYVDNGL-NSMGVA  291 (297)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG-GGCSSC
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCceEEECcCH-hhcCCC
Confidence            899999999999999999999999999 66665 456653

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.1e-37  Score=280.10  Aligned_cols=215  Identities=14%  Similarity=0.126  Sum_probs=177.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +++||||||++|||+++|++|+++|++|++++|+.++..                 .......+|+.+.+......+.+.
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~   64 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------DSNILVDGNKNWTEQEQSILEQTA   64 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------SEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------------cccceeccccCchhHHHHHHHHHH
Confidence            345699999999999999999999999999999876432                 134456678888888887777777


Q ss_pred             Hh--cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          89 DK--FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        89 ~~--~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      +.  +++||+||||||+.......                                                        
T Consensus        65 ~~~~~g~iD~linnAG~~~~~~~~--------------------------------------------------------   88 (235)
T d1ooea_          65 SSLQGSQVDGVFCVAGGWAGGSAS--------------------------------------------------------   88 (235)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTT--------------------------------------------------------
T ss_pred             HHhcCCCeeEEEECCccccccccc--------------------------------------------------------
Confidence            64  58899999999975443221                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhc-
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFK-  245 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-  245 (406)
                        .+.+.+.|+.++++|+.++++++++++|+|+++  |+||++||..+..+  .+++.+|++||+|+++|+++|+.|++ 
T Consensus        89 --~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~  162 (235)
T d1ooea_          89 --SKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGP--TPSMIGYGMAKAAVHHLTSSLAAKDSG  162 (235)
T ss_dssp             --STTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHHSTTSS
T ss_pred             --ccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCC--cccccchHHHHHHHHHHHHHHHHHhcc
Confidence              256678899999999999999999999999764  89999999999887  58899999999999999999999998 


Q ss_pred             -CCCeEEEEecchhhhhHHHHHHhcCCCcccccccCChhhHHHHHHH-hhcCCCCCccceEE
Q psy6113         246 -GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYY-ILSSNPPSLTGQFL  305 (406)
Q Consensus       246 -~~gI~vn~v~PG~~~~t~~~~~~~~~~~~~~~~~~~pe~vA~~v~~-L~s~~~~~~tG~~i  305 (406)
                       +.+|+||+|+||+ ++|++.+...+.  ....++.+|+++++.+++ +.++.++++||+.+
T Consensus       163 ~~~~i~v~~i~Pg~-~~T~~~~~~~~~--~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i  221 (235)
T d1ooea_         163 LPDNSAVLTIMPVT-LDTPMNRKWMPN--ADHSSWTPLSFISEHLLKWTTETSSRPSSGALL  221 (235)
T ss_dssp             CCTTCEEEEEEESC-BCCHHHHHHSTT--CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             CCCceEEEEEecCc-CcCcchhhhCcC--CccccCCCHHHHHHHHHHHhcCccccCCCceEE
Confidence             5799999999996 677776665544  234567799999999874 55666778999988

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.5e-35  Score=273.19  Aligned_cols=213  Identities=21%  Similarity=0.221  Sum_probs=161.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      ||+|||||++|||+++|++|+++|++|++++|+.++                        ..+|+++.+..+.....+..
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------~~~d~~~~~~~~~~~~~~~~   57 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------VIADLSTAEGRKQAIADVLA   57 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------EECCTTSHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------HHHHhcCHHHHHHHHHHHHH
Confidence            899999999999999999999999999999998653                        24588898888887766665


Q ss_pred             hc-CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          90 KF-GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        90 ~~-g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                      +. +.+|++|||||+...                                                              
T Consensus        58 ~~~~~id~lv~~Ag~~~~--------------------------------------------------------------   75 (257)
T d1fjha_          58 KCSKGMDGLVLCAGLGPQ--------------------------------------------------------------   75 (257)
T ss_dssp             TCTTCCSEEEECCCCCTT--------------------------------------------------------------
T ss_pred             HhCCCCcEEEEcCCCCCc--------------------------------------------------------------
Confidence            54 579999999996432                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCC---------------------------CCCCCccC
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPL---------------------------NLNPFWFK  221 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~---------------------------~~~~~~~~  221 (406)
                          .+.|.....+|..+...+.+..+|.+.+.....+.++++..                           +..+. .+
T Consensus        76 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~-~~  150 (257)
T d1fjha_          76 ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE-QG  150 (257)
T ss_dssp             ----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT-TH
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCC-Cc
Confidence                23356677788888888888888877776655565555432                           22221 23


Q ss_pred             CchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhhhHHHHHHhcCCC---------cccccccCChhhHHHHHHHh
Q psy6113         222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS---------ADAKATSRKPEIMADAAYYI  292 (406)
Q Consensus       222 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~~t~~~~~~~~~~---------~~~~~~~~~pe~vA~~v~~L  292 (406)
                      +..+|++||+|+.+|+|+||.||+++|||||+|+||+ +.|++.+......         ..|..|+.+|+|||++++||
T Consensus       151 ~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL  229 (257)
T d1fjha_         151 GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGA-TETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred             chHHHHHHhhhhhccccccccccccccccccccccCC-cCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            4567999999999999999999999999999999996 6676654332211         13677889999999999999


Q ss_pred             hcCCCCCccceEE-EehhHHHHh
Q psy6113         293 LSSNPPSLTGQFL-IDDEVLKAQ  314 (406)
Q Consensus       293 ~s~~~~~~tG~~i-~d~g~~~~~  314 (406)
                      +|+.++|+||+.| +|||++...
T Consensus       230 ~S~~s~~itG~~i~vDGG~tav~  252 (257)
T d1fjha_         230 MSPAASYVHGAQIVIDGGIDAVM  252 (257)
T ss_dssp             TSGGGTTCCSCEEEESTTHHHHH
T ss_pred             hCchhCCccCceEEeCCCccchh
Confidence            9999999999999 888887543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=1.8e-30  Score=240.77  Aligned_cols=213  Identities=14%  Similarity=0.111  Sum_probs=167.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++++|||||++|||+++|++|+++|+ +|++++|+....+.    ..+..+++...+.++.++.||++|+++++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~----~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG----AGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT----HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHH----HHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            67999999999999999999999999 58999998655443    45566777888999999999999999999999987


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                      .+. +++|.+|||+|+....+..                                                         
T Consensus        85 ~~~-~~i~~vv~~ag~~~~~~~~---------------------------------------------------------  106 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATLDDGTVD---------------------------------------------------------  106 (259)
T ss_dssp             CTT-SCEEEEEECCCCCCCCCGG---------------------------------------------------------
T ss_pred             ccc-ccccccccccccccccccc---------------------------------------------------------
Confidence            654 6899999999987655443                                                         


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD  247 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  247 (406)
                        +.+.++|+.++++|+.+++++.+.+    ...+.++||++||.++..+  .++++.|+++|+++++|++.++    ..
T Consensus       107 --~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g--~~~~~~YaAaka~l~~la~~~~----~~  174 (259)
T d2fr1a1         107 --TLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFG--APGLGGYAPGNAYLDGLAQQRR----SD  174 (259)
T ss_dssp             --GCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTC--CTTCTTTHHHHHHHHHHHHHHH----HT
T ss_pred             --cccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccC--CcccHHHHHHHHhHHHHHHHHH----hC
Confidence              8899999999999999999987754    4556789999999999987  4889999999999988776654    45


Q ss_pred             CeEEEEecchhhhhHHHHHHhcCC-CcccccccCChhhHHHHHHHhhcC
Q psy6113         248 NIAVNALWPRTAIYTAAIEMLTGG-SADAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       248 gI~vn~v~PG~~~~t~~~~~~~~~-~~~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      ||+|++|+||.+.++.+.+..... .........+|+++++++..++..
T Consensus       175 Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~  223 (259)
T d2fr1a1         175 GLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDR  223 (259)
T ss_dssp             TCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHT
T ss_pred             CCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence            999999999965555443321111 111122456899999999988864

>d1c44a_ d.106.1.1 (A:) Sterol carrier protein 2 (SCP2) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: Sterol carrier protein 2 (SCP2)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.82  E-value=2.5e-21  Score=157.53  Aligned_cols=79  Identities=44%  Similarity=0.728  Sum_probs=71.1

Q ss_pred             CCCCcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHh-hhcC
Q psy6113         327 GAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGA-LKSK  405 (406)
Q Consensus       327 ~~~~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~-~~~~  405 (406)
                      +...+.|++++++|.|...++. +++|||||+++.++|.+|++|++||++|||+|||||+|||++||||+++|.. .++|
T Consensus        44 ~~~~~~~~l~l~~g~~~~~~g~-~~~ad~tit~~~~~~~~i~~G~~~~~~A~m~Gklkv~Gd~~~amkl~~l~~~~~~ak  122 (123)
T d1c44a_          44 GGKEATWVVDVKNGKGSVLPNS-DKKADCTITMADSDLLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQNLQLQPGKAK  122 (123)
T ss_dssp             GGCCEEEEEEESSTTCEEEETC-CCCCSEEEEEEHHHHHHHHTTSSCHHHHHHTTCCEEEECHHHHHHHHTTCSSCCCCC
T ss_pred             CCceeEEEEEEeCCeeEEecCC-CCCCCEEEEEcHHHHHHHHcCCCCHHHHHHcCCeEEecCHHHHHhHHHHhhhccccC
Confidence            3445689999999999888876 4688999999999999999999999999999999999999999999999875 3687


Q ss_pred             C
Q psy6113         406 L  406 (406)
Q Consensus       406 ~  406 (406)
                      |
T Consensus       123 l  123 (123)
T d1c44a_         123 L  123 (123)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1ikta_ d.106.1.1 (A:) SCP2-like domain of MFE-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: SCP2-like domain of MFE-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=9.5e-21  Score=152.57  Aligned_cols=81  Identities=35%  Similarity=0.671  Sum_probs=73.2

Q ss_pred             CCCCCCcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhhhc
Q psy6113         325 PNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKS  404 (406)
Q Consensus       325 ~~~~~~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~~~  404 (406)
                      ..+...+.|++++++|.+...++.++.+|||||+++.+||.+|+.|++||++|||+|||||+||+++||||+++|+. .+
T Consensus        35 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~d~tit~~~~~~~~i~~G~~~~~~a~~~Gklki~Gd~~~~~~l~~lf~~-f~  113 (115)
T d1ikta_          35 KGGNIGAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKD-YA  113 (115)
T ss_dssp             SSSSEEEEEEEEESSTTCEEEESSCSSCCSEEEEEEHHHHHHHHTTSSCHHHHHHTTSSEEEESHHHHHHHHHHHHH-HT
T ss_pred             CCCCcceEEEEEEECCceEEeccCCCCCCCEEEEEeHHHHHHHHCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHh-hh
Confidence            34555678999999999999988777789999999999999999999999999999999999999999999999986 45


Q ss_pred             CC
Q psy6113         405 KL  406 (406)
Q Consensus       405 ~~  406 (406)
                      ||
T Consensus       114 ~l  115 (115)
T d1ikta_         114 KL  115 (115)
T ss_dssp             TC
T ss_pred             cC
Confidence            54

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.75  E-value=1.3e-19  Score=159.31  Aligned_cols=157  Identities=11%  Similarity=0.068  Sum_probs=111.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.+++       ++..+++... .++....+|+++.++++++ 
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~-------~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~-   89 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA-------QAAADSVNKR-FKVNVTAAETADDASRAEA-   89 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHHHHHH-HTCCCEEEECCSHHHHHHH-
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHH-------HHHHHHHHhc-cchhhhhhhcccHHHHHHH-
Confidence            589999999999999999999999999999999999998763       3444554433 2456688999999988765 


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                            ++++|+||||||+..    .                                                      
T Consensus        90 ------~~~iDilin~Ag~g~----~------------------------------------------------------  105 (191)
T d1luaa1          90 ------VKGAHFVFTAGAIGL----E------------------------------------------------------  105 (191)
T ss_dssp             ------TTTCSEEEECCCTTC----C------------------------------------------------------
T ss_pred             ------hcCcCeeeecCcccc----c------------------------------------------------------
Confidence                  467999999999632    1                                                      


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA  241 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la  241 (406)
                           ..+.++|+..+++|+.+.++....+.+.+.... .....+++.....+. ..+...|+++|+++..++++.+
T Consensus       106 -----~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~-~~g~~~y~~sk~a~~~l~~s~~  175 (191)
T d1luaa1         106 -----LLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGAL-GIGGLKLKLHRACIAKLFESSE  175 (191)
T ss_dssp             -----CBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHH-HHHHHHHHHHHHHHHHHTSCSC
T ss_pred             -----cCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEecc-CcCcHHHHHHHHHHHHHHhcCc
Confidence                 567788988999998887776555443333222 122222222222111 1244679999999988876543

>d1pz4a_ d.106.1.1 (A:) Sterol carrier protein 2 (SCP2) {Yellow fever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: Sterol carrier protein 2 (SCP2)
species: Yellow fever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.62  E-value=6.1e-17  Score=129.47  Aligned_cols=70  Identities=27%  Similarity=0.439  Sum_probs=61.8

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHhhh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALK  403 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~~~  403 (406)
                      ...|+++++++.+...    +++|||||+++.++|.+|++|++||+.|||+|||||+||+++|+||+++|+..|
T Consensus        44 ~~~~~l~~~~~~~~~~----~~~ad~tlt~~~~~~~~i~~G~~~~~~a~~~Gklki~Gd~~~~~~l~~l~~~~~  113 (113)
T d1pz4a_          44 VKNWVMDLKNVKLVES----DDAAEATLTMEDDIMFAIGTGALPAKEAMAQDKMEVDGQVELIFLLEPFIASLK  113 (113)
T ss_dssp             EEEEEEETTTTEEEEC----CCCCSEEEEEEHHHHHHHHTTSSCHHHHHHTTSEEEEESGGGGGGGGGGGGGCC
T ss_pred             eEEEEEEecCceeccC----CCCCCEEEEEcHHHHHHHHhCCCcHHHHHHCCCEEEeCCHHHHHHHHHHHHhcC
Confidence            3469999999866432    247899999999999999999999999999999999999999999999998653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=5.7e-15  Score=141.65  Aligned_cols=213  Identities=11%  Similarity=0.071  Sum_probs=137.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|+||||||+|-||..++++|+++|++|++++|.......  ..+.....+......++.++.+|++|.++++++++.. 
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNT--ERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccch--hhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-
Confidence            3899999999999999999999999999999996532110  0111222233334568999999999999999998865 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          .+|+++|.|+.....                                                             
T Consensus        78 ----~~d~v~h~aa~~~~~-------------------------------------------------------------   92 (357)
T d1db3a_          78 ----QPDEVYNLGAMSHVA-------------------------------------------------------------   92 (357)
T ss_dssp             ----CCSEEEECCCCCTTT-------------------------------------------------------------
T ss_pred             ----CCCEEEEeecccccc-------------------------------------------------------------
Confidence                689999999976432                                                             


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCC---C------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNP---F------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~---~------~~~~~~~Y~asKaal~~l~~~  239 (406)
                        .+.++....+++|+.|+.++++++...-. .+..++|++||...+..   .      +..+...|+.||.+.+.+++.
T Consensus        93 --~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~  169 (357)
T d1db3a_          93 --VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN  169 (357)
T ss_dssp             --TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             --hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence              22344566789999999999988743321 23358999998643211   0      112456899999999999999


Q ss_pred             HHHhhcCCCeEEEEecchhh-------------hhHHHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         240 MAEEFKGDNIAVNALWPRTA-------------IYTAAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~-------------~~t~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +++.+   ++.+..+.|+.+             +...+.........       .....+...+|+++++..++..
T Consensus       170 ~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~  242 (357)
T d1db3a_         170 YRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ  242 (357)
T ss_dssp             HHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS
T ss_pred             HHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhC
Confidence            88875   566666665211             11111111111111       1112355789999999887754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.3e-14  Score=126.53  Aligned_cols=196  Identities=12%  Similarity=0.083  Sum_probs=127.3

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      |..|.++||||+|+||++++++|+++|++|+++.|+.+++...             ....+.++.+|++|.+++.++++ 
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~~gD~~d~~~l~~al~-   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------------GPRPAHVVVGDVLQAADVDKTVA-   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------------SCCCSEEEESCTTSHHHHHHHHT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------------cccccccccccccchhhHHHHhc-
Confidence            3467899999999999999999999999999999998775532             12457889999999998776644 


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                            +.|++|+++|........                                                        
T Consensus        67 ------~~d~vi~~~g~~~~~~~~--------------------------------------------------------   84 (205)
T d1hdoa_          67 ------GQDAVIVLLGTRNDLSPT--------------------------------------------------------   84 (205)
T ss_dssp             ------TCSEEEECCCCTTCCSCC--------------------------------------------------------
T ss_pred             ------CCCEEEEEeccCCchhhh--------------------------------------------------------
Confidence                  579999999864321110                                                        


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--ccCCchhhhHhhHHHHHHHHHHHHhh
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--WFKNHVAYTISKYGMSMCALGMAEEF  244 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--~~~~~~~Y~asKaal~~l~~~la~e~  244 (406)
                                    +++..+..+    +++.+++.+-.++|++||.......  ..+....|...|...+.+       +
T Consensus        85 --------------~~~~~~~~~----l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~-------l  139 (205)
T d1hdoa_          85 --------------TVMSEGARN----IVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKV-------L  139 (205)
T ss_dssp             --------------CHHHHHHHH----HHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHH-------H
T ss_pred             --------------hhhHHHHHH----HHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHH-------H
Confidence                          122333333    3445577777899999986544321  112233566666554433       3


Q ss_pred             cCCCeEEEEecchhhhhHHHHHHhc-CCCcccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         245 KGDNIAVNALWPRTAIYTAAIEMLT-GGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       245 ~~~gI~vn~v~PG~~~~t~~~~~~~-~~~~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      ...|++...|.||++...+...... .........+.+.+|+|+.++.++.++ . ..|+.+
T Consensus       140 ~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~-~-~~g~~~  199 (205)
T d1hdoa_         140 RESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTD-E-YDGHST  199 (205)
T ss_dssp             HHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCS-T-TTTCEE
T ss_pred             HhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCC-C-CCCEEE
Confidence            3468999999998653321100000 000112233467899999999988653 3 346655

>d1wfra_ d.106.1.1 (A:) Hypothetical protein TT1886 (TTHA0401) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Sterol carrier protein, SCP
domain: Hypothetical protein TT1886 (TTHA0401)
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=8.8e-16  Score=127.40  Aligned_cols=72  Identities=19%  Similarity=0.321  Sum_probs=62.9

Q ss_pred             CcceEEeccCCCcccccCCC-CCCCceEEEeeHHhHHHHHcCCCCchhhhhccCcee-ecCHHHHhhHHHHHHh
Q psy6113         330 EGSWHIDLKTGSGSSGRGKP-SSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKI-SGNLQKAMKLEKLMGA  401 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~-~g~~~~a~~~~~~~~~  401 (406)
                      .-.|+|++++|.|...+... +.+|||||+++.+||.+|++|++||++|||+||||| +|||+.|||+.+++..
T Consensus        55 ~~~~~l~lk~G~~~~~~~~~~~~~~d~~l~a~~~~w~~l~~G~l~~~~A~m~GklK~~kGd~~~~~k~~~~~~~  128 (143)
T d1wfra_          55 GVAVVLDLWHGACRGAKAVEGEAEADFVIEADLATWQEVLEGRLEPLSALMRGLLELKKGTIAALAPYAQAAQE  128 (143)
T ss_dssp             CEEEEEEEETTEEEECCEESSSCCCSEEEEECHHHHHHHHHTSSCHHHHHHHTSSCBCSSCGGGTTTTSSHHHH
T ss_pred             ceEEEEEEeCCEEEEccccCCCCCCCEEEEEeHHHHHHHHcCCCChhHHHhcCCceeccCCHHHHHHhHHHHHH
Confidence            44799999999987554322 347899999999999999999999999999999999 7999999999888764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=1.8e-13  Score=129.87  Aligned_cols=165  Identities=16%  Similarity=0.147  Sum_probs=122.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +|||||+|-||..++++|+++|++|++++|.......       .....+ ....++.++++|++|.+.+.++++..   
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   72 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRS-------VLPVIERLGGKHPTFVEGDIRNEALMTEILHDH---   72 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTT-------HHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT---
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchh-------hHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc---
Confidence            9999999999999999999999999999875544332       122222 23457889999999999998887753   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||.|+....                                                               .
T Consensus        73 --~~d~ViHlAa~~~~---------------------------------------------------------------~   87 (338)
T d1udca_          73 --AIDTVIHFAGLKAV---------------------------------------------------------------G   87 (338)
T ss_dssp             --TCSEEEECCSCCCH---------------------------------------------------------------H
T ss_pred             --CCCEEEECCCccch---------------------------------------------------------------h
Confidence              68999999995421                                                               2


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------cCCchhhhHhhHHHHHHHHHH
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------FKNHVAYTISKYGMSMCALGM  240 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------~~~~~~Y~asKaal~~l~~~l  240 (406)
                      .+.++....+++|+.|+.++++++    ++.+-.++|++||...+.+..          ..+...|+.+|.+.+.+.+..
T Consensus        88 ~~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~  163 (338)
T d1udca_          88 ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDL  163 (338)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             hHHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHH
Confidence            233445678899999999998888    444556899999966442211          124678999999999999887


Q ss_pred             HHhhcCCCeEEEEecch
Q psy6113         241 AEEFKGDNIAVNALWPR  257 (406)
Q Consensus       241 a~e~~~~gI~vn~v~PG  257 (406)
                      +.+.  .++.+..+.|+
T Consensus       164 ~~~~--~~~~~~ilR~~  178 (338)
T d1udca_         164 QKAQ--PDWSIALLRYF  178 (338)
T ss_dssp             HHHS--TTCEEEEEEEC
T ss_pred             Hhhc--cCCeEEEEeec
Confidence            7764  35666666655

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=1.6e-13  Score=130.68  Aligned_cols=170  Identities=14%  Similarity=0.078  Sum_probs=122.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|++|||||+|-||..++++|+++|++|+++++......      ......-.....++.++.+|++|.++++.+++.. 
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTY------DSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT------HHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcch------hHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-
Confidence            389999999999999999999999999999886443321      1112222223557889999999999998887643 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++||+|+.....                                                             
T Consensus        74 ----~~d~VihlAa~~~~~-------------------------------------------------------------   88 (347)
T d1z45a2          74 ----KIDSVIHFAGLKAVG-------------------------------------------------------------   88 (347)
T ss_dssp             ----CCCEEEECCSCCCHH-------------------------------------------------------------
T ss_pred             ----CCCEEEEcccccccc-------------------------------------------------------------
Confidence                699999999965321                                                             


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC-------------ccCCchhhhHhhHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF-------------WFKNHVAYTISKYGMSM  235 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~-------------~~~~~~~Y~asKaal~~  235 (406)
                        ...+.-.....+|+.++.++.+++    ++.+-.++|++||...+...             +..+...|+.||.+.+.
T Consensus        89 --~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~  162 (347)
T d1z45a2          89 --ESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN  162 (347)
T ss_dssp             --HHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             --ccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence              122334567889999999999988    44455689999996544211             01234679999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecch
Q psy6113         236 CALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG  257 (406)
                      +.+.+.... ..++++..+.|+
T Consensus       163 ~~~~~~~~~-~~~~~~~~lR~~  183 (347)
T d1z45a2         163 ILNDLYNSD-KKSWKFAILRYF  183 (347)
T ss_dssp             HHHHHHHHS-TTSCEEEEEEEC
T ss_pred             HHHHHHHhh-ccCCcEEEEeec
Confidence            998887654 345666666554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.48  E-value=6.9e-13  Score=128.27  Aligned_cols=176  Identities=16%  Similarity=0.090  Sum_probs=121.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEec----------CCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCCh
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAK----------TAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDE   77 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r----------~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~   77 (406)
                      |+.+|||||+|-||.+++++|+++|++|+++|.          ....+..... ......... ..+.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIAS-IHDRISRWKALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCC-HHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccc-hHHHHHHHHhhcCCCcEEEEccCCCH
Confidence            688999999999999999999999999999861          1111111111 112222222 2356789999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEe
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILV  157 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li  157 (406)
                      +.++++++..     ++|++||.|+.......                                                
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s------------------------------------------------  106 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYS------------------------------------------------  106 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHH------------------------------------------------
T ss_pred             HHHHHHHHhh-----cchheeccccccccccc------------------------------------------------
Confidence            9999988865     79999999986532211                                                


Q ss_pred             ccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcC-CCeEEEeCCCCCCCCC------------------
Q psy6113         158 NNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPF------------------  218 (406)
Q Consensus       158 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~Iv~vsS~~~~~~~------------------  218 (406)
                                  ..+.+.....+++|+.|+.++.+++    ++.+ ..++++.||.......                  
T Consensus       107 ------------~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~  170 (393)
T d1i24a_         107 ------------MIDRSRAVYTQHNNVIGTLNVLFAI----KEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTD  170 (393)
T ss_dssp             ------------TSCHHHHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEE
T ss_pred             ------------cccccccccccccccccccHHHHHH----HHhccccceeecccccccccccccccccccccccccccc
Confidence                        3445556778899999999998887    3333 2456777765432210                  


Q ss_pred             ----ccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecch
Q psy6113         219 ----WFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       219 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  257 (406)
                          +..+...|+.||.+.+.+++.++.++   ++++.++.|+
T Consensus       171 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~  210 (393)
T d1i24a_         171 TLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG  210 (393)
T ss_dssp             EEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred             ccccccccccHHHHHhhhhccccccccccc---ceeeeecccc
Confidence                01123469999999999999887765   5666666654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.1e-12  Score=124.48  Aligned_cols=212  Identities=14%  Similarity=0.089  Sum_probs=136.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH-HHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~-~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |+||||||+|-||..++++|.++|++|+.++|........  .+....... .....++.++.+|++|.+.+.++++.. 
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTG--RIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCT--TTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh--hHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-
Confidence            5569999999999999999999999999999975432210  111111111 112346889999999999999988765 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          .++++++.++....                                                              
T Consensus        79 ----~~~~v~~~~a~~~~--------------------------------------------------------------   92 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSHV--------------------------------------------------------------   92 (347)
T ss_dssp             ----CCSEEEECCSCCCH--------------------------------------------------------------
T ss_pred             ----ccceeeeeeecccc--------------------------------------------------------------
Confidence                67888888875432                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~  239 (406)
                       ....+.....+++|+.|+.++..++..+-.. +..++|++||.+.+...         +..+...|+.||.+.+.+++.
T Consensus        93 -~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~  170 (347)
T d1t2aa_          93 -KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVN  170 (347)
T ss_dssp             -HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -chhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence             2223445567899999999998887443221 23589999986533211         012356799999999999998


Q ss_pred             HHHhhcCCCeEEEEecchhh---------hhHH----HHHHhcCCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         240 MAEEFKGDNIAVNALWPRTA---------IYTA----AIEMLTGGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG~~---------~~t~----~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +++.+   ++.+..+.|+.+         ....    ..........       .....+...+|+++++..++..
T Consensus       171 ~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         171 FREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             HHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             HHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhc
Confidence            87775   455555554210         1111    1111111110       1122356789999999888864

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.39  E-value=3.3e-12  Score=121.28  Aligned_cols=172  Identities=17%  Similarity=0.138  Sum_probs=123.6

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      ++||++|||||+|-||..+++.|+++|++|++++|+......+       .+ .......+.++.+|++|++.+.++++.
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~-------~~-~~~~~~~i~~~~~Dl~d~~~l~~~~~~   77 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSL-------FE-TARVADGMQSEIGDIRDQNKLLESIRE   77 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCH-------HH-HTTTTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHH-------Hh-hhhcccCCeEEEeeccChHhhhhhhhh
Confidence            6899999999999999999999999999999999987764431       11 112234688999999999999888775


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                      .     .+|+++|.|+....                                                            
T Consensus        78 ~-----~~~~v~~~aa~~~~------------------------------------------------------------   92 (356)
T d1rkxa_          78 F-----QPEIVFHMAAQPLV------------------------------------------------------------   92 (356)
T ss_dssp             H-----CCSEEEECCSCCCH------------------------------------------------------------
T ss_pred             c-----hhhhhhhhhccccc------------------------------------------------------------
Confidence            5     78999999985432                                                            


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------ccCCchhhhHhhHHHHHH
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------WFKNHVAYTISKYGMSMC  236 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------~~~~~~~Y~asKaal~~l  236 (406)
                         ..+.+.....+++|+.++..+.+++...   .....++..||.......          ...+...|+.+|...+.+
T Consensus        93 ---~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~  166 (356)
T d1rkxa_          93 ---RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV  166 (356)
T ss_dssp             ---HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred             ---cccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccCCCCccccccccchhh
Confidence               2233456678899999999998887421   223455555553322111          112456799999999999


Q ss_pred             HHHHHHhhc------CCCeEEEEecch
Q psy6113         237 ALGMAEEFK------GDNIAVNALWPR  257 (406)
Q Consensus       237 ~~~la~e~~------~~gI~vn~v~PG  257 (406)
                      ++..+.++.      .+++.+..+.|+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~  193 (356)
T d1rkxa_         167 TSSYRNSFFNPANYGQHGTAVATVRAG  193 (356)
T ss_dssp             HHHHHHHHSCGGGHHHHCCEEEEEECC
T ss_pred             hhHHhhhcccchhccccCceEEeccCC
Confidence            988887653      245666666654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.39  E-value=2.2e-12  Score=120.80  Aligned_cols=202  Identities=14%  Similarity=0.097  Sum_probs=133.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      |+||||||+|-||+.++++|+++|++|+.++|.......         ..+...  ..++.++.+|++|.+++.+.+...
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~---------~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR---------WRLRELGIEGDIQYEDGDMADACSVQRAVIKA   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC---------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH---------HHHHHhcccCCcEEEEccccChHHhhhhhccc
Confidence            789999999999999999999999999999997654221         222222  246889999999999998887765


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           ..++++++|+.....                                                            
T Consensus        72 -----~~~~~~~~a~~~~~~------------------------------------------------------------   86 (321)
T d1rpna_          72 -----QPQEVYNLAAQSFVG------------------------------------------------------------   86 (321)
T ss_dssp             -----CCSEEEECCSCCCHH------------------------------------------------------------
T ss_pred             -----ccccccccccccccc------------------------------------------------------------
Confidence                 567888887754321                                                            


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCC-CeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHH
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH-AHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCA  237 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~-g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~  237 (406)
                         ...++....+++|+.|+.+++.++    ++.+. .++++.||..-....         +......|+.||.+.+.+.
T Consensus        87 ---~~~~~~~~~~~~n~~g~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  159 (321)
T d1rpna_          87 ---ASWNQPVTTGVVDGLGVTHLLEAI----RQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWIT  159 (321)
T ss_dssp             ---HHTTSHHHHHHHHTHHHHHHHHHH----HHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ---ccccchHHHHhhhhhchHHHHHHH----HHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHH
Confidence               122334677889999999998877    44332 356666664321110         1124578999999999999


Q ss_pred             HHHHHhhcCCCeEEEEecchh---h----------hhHHHHHHhcCCCc-------ccccccCChhhHHHHHHHhhcC
Q psy6113         238 LGMAEEFKGDNIAVNALWPRT---A----------IYTAAIEMLTGGSA-------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       238 ~~la~e~~~~gI~vn~v~PG~---~----------~~t~~~~~~~~~~~-------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +.++.++   ++.+..+.|+.   +          +.....+.......       .....+...+|+|+++..++..
T Consensus       160 ~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~  234 (321)
T d1rpna_         160 VNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ  234 (321)
T ss_dssp             HHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS
T ss_pred             HHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhc
Confidence            9988775   45555555421   0          01111111111111       1112356789999999998754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.39  E-value=4.2e-13  Score=127.53  Aligned_cols=166  Identities=18%  Similarity=0.176  Sum_probs=116.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHH--HHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEV--EDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~--~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      +||+|+||||+|-||..++++|+++|++|+.+.|+.++.       .......  .........+..|+++.+++.+++ 
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-------ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhH-------HHHHHhhhccccccccEEEeccccchhhhhhhc-
Confidence            589999999999999999999999999999999976431       1111111  112334455678999998765543 


Q ss_pred             HHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccccc
Q psy6113          86 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISL  165 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  165 (406)
                            ...|+++|+|+....                                                           
T Consensus        82 ------~~~~~v~~~a~~~~~-----------------------------------------------------------   96 (342)
T d1y1pa1          82 ------KGAAGVAHIASVVSF-----------------------------------------------------------   96 (342)
T ss_dssp             ------TTCSEEEECCCCCSC-----------------------------------------------------------
T ss_pred             ------ccchhhhhhcccccc-----------------------------------------------------------
Confidence                  367999999885421                                                           


Q ss_pred             CCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------------------------
Q psy6113         166 TDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------------------------  219 (406)
Q Consensus       166 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------------------------  219 (406)
                          ..+   ....+..|+.|+.++++.+...   .+-.++|++||..+.....                          
T Consensus        97 ----~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e  166 (342)
T d1y1pa1          97 ----SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE  166 (342)
T ss_dssp             ----CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred             ----ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccccccccccccccccccc
Confidence                111   3455678999999988877331   2347999999965332110                          


Q ss_pred             ---cCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecch
Q psy6113         220 ---FKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       220 ---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  257 (406)
                         ......|+.||.+.+.+++.++++.. .++++.+|+|+
T Consensus       167 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~  206 (342)
T d1y1pa1         167 SDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPN  206 (342)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEES
T ss_pred             cCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceeccc
Confidence               01234699999999999999888764 46777777765

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.38  E-value=1.1e-12  Score=125.63  Aligned_cols=208  Identities=16%  Similarity=0.118  Sum_probs=136.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .+|||||+|-||..++++|+++|++|++.-++.......    +. ...+ ....++.++.+|++|...++++++..   
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~----~~-~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~---   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL----ES-LSDI-SESNRYNFEHADICDSAEITRIFEQY---   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG----GG-GTTT-TTCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccH----HH-HHhh-hhcCCcEEEEccCCCHHHHHHHHHhC---
Confidence            389999999999999999999999765543332221110    00 0111 11346889999999999998887754   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        .+|++||+|+....                                                               .
T Consensus        73 --~~d~VihlAa~~~~---------------------------------------------------------------~   87 (361)
T d1kewa_          73 --QPDAVMHLAAESHV---------------------------------------------------------------D   87 (361)
T ss_dssp             --CCSEEEECCSCCCH---------------------------------------------------------------H
T ss_pred             --CCCEEEECccccch---------------------------------------------------------------h
Confidence              69999999985422                                                               1


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-----CCCeEEEeCCCCCCCCC-------------------ccCCchhh
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKS-----NHAHILNISPPLNLNPF-------------------WFKNHVAY  226 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~Iv~vsS~~~~~~~-------------------~~~~~~~Y  226 (406)
                      .+.++...++++|+.|+.++.+.+...-...     +..++|++||...+...                   ...+...|
T Consensus        88 ~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  167 (361)
T d1kewa_          88 RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPY  167 (361)
T ss_dssp             HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHH
T ss_pred             hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHH
Confidence            2233446688999999999999987765432     33689999996543211                   01234569


Q ss_pred             hHhhHHHHHHHHHHHHhhcCCCeEEEEecchhhh---------hHHHHHH-hcCCCcc------cccccCChhhHHHHHH
Q psy6113         227 TISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI---------YTAAIEM-LTGGSAD------AKATSRKPEIMADAAY  290 (406)
Q Consensus       227 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~~---------~t~~~~~-~~~~~~~------~~~~~~~pe~vA~~v~  290 (406)
                      +.||.+.+.+++.++..+   |+.+.++.|+.+.         -+.+... .......      ....+...+|+|+++.
T Consensus       168 g~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~  244 (361)
T d1kewa_         168 SASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALH  244 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHH
Confidence            999999999999998776   5666666653211         1122222 2222111      1123457899999998


Q ss_pred             HhhcC
Q psy6113         291 YILSS  295 (406)
Q Consensus       291 ~L~s~  295 (406)
                      .++..
T Consensus       245 ~~~~~  249 (361)
T d1kewa_         245 MVVTE  249 (361)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            88864

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=3.6e-12  Score=120.26  Aligned_cols=175  Identities=12%  Similarity=0.067  Sum_probs=121.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC-CcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK-LPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~-~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |++|||||+|-||+.+++.|+++|++|+.++|....... -.+.+......  .....+.++.+|+++.+++.+.++.. 
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN--VNKALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh--ccccceEEEEccccCHHHHHHHHhhh-
Confidence            899999999999999999999999999999986432110 00011111111  12346788999999999998888754 


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          ++|++||.|+....                                                              
T Consensus        79 ----~~D~Vih~Aa~~~~--------------------------------------------------------------   92 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSHV--------------------------------------------------------------   92 (339)
T ss_dssp             ----CCSEEEECCSCCCH--------------------------------------------------------------
T ss_pred             ----ccchhhhccccccc--------------------------------------------------------------
Confidence                79999999996432                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhc-CCCeEEEeCCCCCCCCC--------ccCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS-NHAHILNISPPLNLNPF--------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~Iv~vsS~~~~~~~--------~~~~~~~Y~asKaal~~l~~~  239 (406)
                       ....++....+++|+.+...+..++....... ...+++..||.......        +..+...|+.||.+.+.+++.
T Consensus        93 -~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  171 (339)
T d1n7ha_          93 -AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVN  171 (339)
T ss_dssp             -HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence             12234456788899999999988886554443 23456666654321111        112467899999999999988


Q ss_pred             HHHhhcCCCeEEEEecch
Q psy6113         240 MAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       240 la~e~~~~gI~vn~v~PG  257 (406)
                      .++.+   ++.+..+.|+
T Consensus       172 ~~~~~---~~~~~ilR~~  186 (339)
T d1n7ha_         172 YREAY---GLFACNGILF  186 (339)
T ss_dssp             HHHHH---CCEEEEEEEC
T ss_pred             HHHHh---CCCEEEEEEc
Confidence            88765   5777777763

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=5.4e-12  Score=119.63  Aligned_cols=172  Identities=15%  Similarity=0.052  Sum_probs=118.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHH-HcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVE-DAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      |.+|||||+|-||.+++++|+++|++|++++|............ ...+.+. ....++.++.+|++|.+.+++++..  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLP-ESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSB-HHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccch-HHHHHHHHhcCCCcEEEEeeccccccccccccc--
Confidence            67899999999999999999999999999876333221111001 1122222 2356789999999999999887764  


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                         ..+++++|.|+....                                                              
T Consensus        80 ---~~~~~i~h~Aa~~~~--------------------------------------------------------------   94 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAV--------------------------------------------------------------   94 (346)
T ss_dssp             ---CCEEEEEECCSCCCH--------------------------------------------------------------
T ss_pred             ---cccccccccccccCc--------------------------------------------------------------
Confidence               468899999996532                                                              


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------cCCchhhhHhhHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------FKNHVAYTISKYGMSMCAL  238 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------~~~~~~Y~asKaal~~l~~  238 (406)
                       ..+.++....+++|+.++.++.+++    ++.+-.+++++||........          ......|+.+|...+...+
T Consensus        95 -~~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~  169 (346)
T d1ek6a_          95 -GESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIR  169 (346)
T ss_dssp             -HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred             -HhhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHH
Confidence             1223344567899999999988876    455556899988864332211          1234579999999998888


Q ss_pred             HHHHhhcCCCeEEEEecc
Q psy6113         239 GMAEEFKGDNIAVNALWP  256 (406)
Q Consensus       239 ~la~e~~~~gI~vn~v~P  256 (406)
                      .++...  .++....+.|
T Consensus       170 ~~~~~~--~~~~~~~lR~  185 (346)
T d1ek6a_         170 DLCQAD--KTWNAVLLRY  185 (346)
T ss_dssp             HHHHHC--TTCEEEEEEE
T ss_pred             HHHHhc--cCCceEEEee
Confidence            876642  3444444444

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=2.9e-12  Score=119.75  Aligned_cols=149  Identities=13%  Similarity=0.113  Sum_probs=111.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .|.+|||||+|-||.+++++|+++|+.|+++++..+                           +|+.+.+.+..+++.  
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------------------~~~~~~~~~~~~~~~--   52 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------------LNLLDSRAVHDFFAS--   52 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------------CCTTCHHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------------------ccccCHHHHHHHHhh--
Confidence            478999999999999999999999998887654321                           488999988887763  


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                         ..+|.++|+|+.....                                                             
T Consensus        53 ---~~~d~v~~~a~~~~~~-------------------------------------------------------------   68 (315)
T d1e6ua_          53 ---ERIDQVYLAAAKVGGI-------------------------------------------------------------   68 (315)
T ss_dssp             ---HCCSEEEECCCCCCCH-------------------------------------------------------------
T ss_pred             ---cCCCEEEEcchhcccc-------------------------------------------------------------
Confidence               2689999998754321                                                             


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc--------------cCCchhhhHhhHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW--------------FKNHVAYTISKYGMS  234 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~--------------~~~~~~Y~asKaal~  234 (406)
                       .....+....+++|+.++.++++++    .+.+-.++|++||.+.+.+..              .+....|+.||.+.+
T Consensus        69 -~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  143 (315)
T d1e6ua_          69 -VANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGI  143 (315)
T ss_dssp             -HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHH
T ss_pred             -ccchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHH
Confidence             1122334556788999999998877    444556899999977553210              112457999999999


Q ss_pred             HHHHHHHHhhcCCCeEEEEecchh
Q psy6113         235 MCALGMAEEFKGDNIAVNALWPRT  258 (406)
Q Consensus       235 ~l~~~la~e~~~~gI~vn~v~PG~  258 (406)
                      .+++.+.++.   |+++..+.|+.
T Consensus       144 ~~~~~~~~~~---gl~~~ilR~~~  164 (315)
T d1e6ua_         144 KLCESYNRQY---GRDYRSVMPTN  164 (315)
T ss_dssp             HHHHHHHHHH---CCEEEEEEECE
T ss_pred             HHHHHHHHHh---CCCEEEEeecc
Confidence            9999998876   68888888753

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.6e-12  Score=114.35  Aligned_cols=200  Identities=13%  Similarity=0.093  Sum_probs=131.0

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      +|++|+++||||||.||++++++|+++|.  +|++++|++.....             .....+....+|+.+.+++   
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------------~~~~~i~~~~~D~~~~~~~---   74 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------EAYKNVNQEVVDFEKLDDY---   74 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------------GGGGGCEEEECCGGGGGGG---
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------------cccceeeeeeecccccccc---
Confidence            57889999999999999999999999995  89999998765432             1123455566777766543   


Q ss_pred             HHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                          .+.+...|++||++|...                                                          
T Consensus        75 ----~~~~~~~d~vi~~~~~~~----------------------------------------------------------   92 (232)
T d2bkaa1          75 ----ASAFQGHDVGFCCLGTTR----------------------------------------------------------   92 (232)
T ss_dssp             ----GGGGSSCSEEEECCCCCH----------------------------------------------------------
T ss_pred             ----cccccccccccccccccc----------------------------------------------------------
Confidence                344557899999998531                                                          


Q ss_pred             ccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHh
Q psy6113         164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE  243 (406)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e  243 (406)
                              .........++|+.++..+.+.+    .+.+-.++|++||......    ....|+.+|...+...+.    
T Consensus        93 --------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~----~~~~Y~~~K~~~E~~l~~----  152 (232)
T d2bkaa1          93 --------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS----SNFLYLQVKGEVEAKVEE----  152 (232)
T ss_dssp             --------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT----CSSHHHHHHHHHHHHHHT----
T ss_pred             --------cccchhhhhhhcccccceeeecc----cccCccccccCCccccccC----ccchhHHHHHHhhhcccc----
Confidence                    12234455678998988888877    4556678999999876543    345799999887765433    


Q ss_pred             hcCCCe-EEEEecchhhhhH--------HHHHHhcCCC--cccccccCChhhHHHHHHHhhcCCCCCccceEEEeh
Q psy6113         244 FKGDNI-AVNALWPRTAIYT--------AAIEMLTGGS--ADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD  308 (406)
Q Consensus       244 ~~~~gI-~vn~v~PG~~~~t--------~~~~~~~~~~--~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d~  308 (406)
                         .+. ++..+.||.+...        ..........  ........+.+|+|++++.++....  -.+..++.+
T Consensus       153 ---~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~--~~~~~i~~~  223 (232)
T d2bkaa1         153 ---LKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR--DKQMELLEN  223 (232)
T ss_dssp             ---TCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEEEEEH
T ss_pred             ---ccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc--cCCeEEEcH
Confidence               233 4566788743221        0111111111  1112233567999999888875433  345555554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.34  E-value=2.2e-11  Score=115.20  Aligned_cols=166  Identities=17%  Similarity=0.118  Sum_probs=118.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-----cCCeeeeeeecCCChHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-----AGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-----~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      .-|++|||||+|-||..++++|.++|++|+.++|......       .....+..     ....+.++.+|+.|......
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~   87 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQ-------RNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN   87 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH-------HHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcch-------hhHHHHHHhhhhcccCCeeEEeecccccccccc
Confidence            4589999999999999999999999999999987443211       11111111     12357889999999887554


Q ss_pred             HHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccc
Q psy6113          83 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA  162 (406)
Q Consensus        83 ~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  162 (406)
                      .       ....+.+++.++....                                                        
T Consensus        88 ~-------~~~~~~v~~~~a~~~~--------------------------------------------------------  104 (341)
T d1sb8a_          88 A-------CAGVDYVLHQAALGSV--------------------------------------------------------  104 (341)
T ss_dssp             H-------HTTCSEEEECCSCCCH--------------------------------------------------------
T ss_pred             c-------cccccccccccccccc--------------------------------------------------------
Confidence            3       2356788877764321                                                        


Q ss_pred             cccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHH
Q psy6113         163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGM  233 (406)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal  233 (406)
                             ..+.++....+++|+.|+.++.+++    .+.+..++|++||...+...         +..+...|+.||.+.
T Consensus       105 -------~~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  173 (341)
T d1sb8a_         105 -------PRSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  173 (341)
T ss_dssp             -------HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             -------cccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence                   2234566778999999999999888    44555699999997643211         122457899999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecch
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG  257 (406)
                      +.+++.+++.+   ++++..+.|+
T Consensus       174 E~~~~~~~~~~---~i~~~ilR~~  194 (341)
T d1sb8a_         174 ELYADVFSRCY---GFSTIGLRYF  194 (341)
T ss_dssp             HHHHHHHHHHH---CCCCEEEEEC
T ss_pred             HHHHHHHHHHh---CCCeEEEEec
Confidence            99999998776   4555555554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=2.2e-11  Score=115.04  Aligned_cols=206  Identities=12%  Similarity=0.079  Sum_probs=133.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      .+|||||+|-||+.++++|+++|+ +|+++++........            ....++.++++|+++.+++.+.+.    
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~------------~~~~~~~~i~~Di~~~~~~~~~~~----   65 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF------------LNHPHFHFVEGDISIHSEWIEYHV----   65 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG------------TTCTTEEEEECCTTTCSHHHHHHH----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh------------ccCCCeEEEECccCChHHHHHHHH----
Confidence            389999999999999999999994 898888765432211            113578999999998877655322    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                        ..+|++||+|+.....                                                              
T Consensus        66 --~~~d~Vih~a~~~~~~--------------------------------------------------------------   81 (342)
T d2blla1          66 --KKCDVVLPLVAIATPI--------------------------------------------------------------   81 (342)
T ss_dssp             --HHCSEEEECBCCCCHH--------------------------------------------------------------
T ss_pred             --hCCCcccccccccccc--------------------------------------------------------------
Confidence              1489999999965321                                                              


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------------cCCchhhhHhhHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------------FKNHVAYTISKYGM  233 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------------~~~~~~Y~asKaal  233 (406)
                       ...++....+++|+.|+.++++++    .+.+ .+++++||........                ..+...|+.||.+.
T Consensus        82 -~~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~  155 (342)
T d2blla1          82 -EYTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  155 (342)
T ss_dssp             -HHHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred             -ccccCCcccccccccccccccccc----cccc-ccccccccccccccccccccccccccccccccCCCcchhhhcccch
Confidence             122334567889999999999987    4443 4666777644322110                12346799999999


Q ss_pred             HHHHHHHHHhhcCCCeEEEEecchhhh-----------------hHHHH-HHhcCCCc------ccccccCChhhHHHHH
Q psy6113         234 SMCALGMAEEFKGDNIAVNALWPRTAI-----------------YTAAI-EMLTGGSA------DAKATSRKPEIMADAA  289 (406)
Q Consensus       234 ~~l~~~la~e~~~~gI~vn~v~PG~~~-----------------~t~~~-~~~~~~~~------~~~~~~~~pe~vA~~v  289 (406)
                      +.+++.+++.+   |+.+..+.|..+.                 ...+. +.......      .....+...+|+++++
T Consensus       156 E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~  232 (342)
T d2blla1         156 DRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (342)
T ss_dssp             HHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             hhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccccee
Confidence            99999998876   4555555442111                 11111 12222211      1122356789999999


Q ss_pred             HHhhcCCCCCccceEE
Q psy6113         290 YYILSSNPPSLTGQFL  305 (406)
Q Consensus       290 ~~L~s~~~~~~tG~~i  305 (406)
                      ..++........|+.+
T Consensus       233 ~~~~~~~~~~~~g~~~  248 (342)
T d2blla1         233 YRIIENAGNRCDGEII  248 (342)
T ss_dssp             HHHHHCGGGTTTTEEE
T ss_pred             eeehhhccccCCCeEE
Confidence            9998754444446655

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.30  E-value=2.3e-11  Score=114.11  Aligned_cols=157  Identities=18%  Similarity=0.157  Sum_probs=112.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      .+|||||+|-||..++++|+++|++|+.+++-.....      ......+ ....++.++.+|+++.+++.++++..   
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~------~~~~~~~-~~~~~~~~i~~Di~~~~~l~~~~~~~---   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA------TDNLHWL-SSLGNFEFVHGDIRNKNDVTRLITKY---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH------HHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc------hhHHHHh-hccCCcEEEEcccCCHHHHHHHHHhc---
Confidence            4899999999999999999999999999875433211      0111222 23457889999999999999888765   


Q ss_pred             cCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCC
Q psy6113          91 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN  170 (406)
Q Consensus        91 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  170 (406)
                        ++|++||+|+....                                                               .
T Consensus        72 --~~d~Vih~aa~~~~---------------------------------------------------------------~   86 (338)
T d1orra_          72 --MPDSCFHLAGQVAM---------------------------------------------------------------T   86 (338)
T ss_dssp             --CCSEEEECCCCCCH---------------------------------------------------------------H
T ss_pred             --CCceEEeecccccc---------------------------------------------------------------c
Confidence              68999999986532                                                               1


Q ss_pred             CchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------------------ccCCch
Q psy6113         171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------------------WFKNHV  224 (406)
Q Consensus       171 ~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------------------~~~~~~  224 (406)
                      ...++....+++|+.|+.++++++    .+.+..+.|+.||.....+.                          ...+..
T Consensus        87 ~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (338)
T d1orra_          87 TSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHS  162 (338)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCH
T ss_pred             ccccChHHHHHHHHHHHHHHHHhh----hcccccccccccccccccccccccccccccccccccccccCcccCCcccccc
Confidence            223345678899999999999877    44444555555554322111                          012357


Q ss_pred             hhhHhhHHHHHHHHHHHHhhcC
Q psy6113         225 AYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       225 ~Y~asKaal~~l~~~la~e~~~  246 (406)
                      .|+.+|...+.+.......+..
T Consensus       163 ~y~~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         163 PYGCSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccchhhhhhhhhhhccCc
Confidence            8999999999998888887743

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=8.3e-13  Score=123.92  Aligned_cols=195  Identities=14%  Similarity=0.066  Sum_probs=122.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |.+|||||+|-||+.++++|+++|++|+.++|......+.   +    ... ....++.....|+.+.            
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~----~~~-~~~~~~d~~~~~~~~~------------   61 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---V----EHW-IGHENFELINHDVVEP------------   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---T----GGG-TTCTTEEEEECCTTSC------------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH---H----HHh-cCCCceEEEehHHHHH------------
Confidence            7899999999999999999999999999998744321110   0    000 0011233333333221            


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                      .+.++|++||.|+......                                                             
T Consensus        62 ~~~~~d~VihlAa~~~~~~-------------------------------------------------------------   80 (312)
T d2b69a1          62 LYIEVDQIYHLASPASPPN-------------------------------------------------------------   80 (312)
T ss_dssp             CCCCCSEEEECCSCCSHHH-------------------------------------------------------------
T ss_pred             HHcCCCEEEECcccCCchh-------------------------------------------------------------
Confidence            2346899999998643211                                                             


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC--------------ccCCchhhhHhhHHHHH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF--------------WFKNHVAYTISKYGMSM  235 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~--------------~~~~~~~Y~asKaal~~  235 (406)
                        ..++....+++|+.++.++++++    ++.+ .++|++||.+.+...              +..+...|+.||.+.+.
T Consensus        81 --~~~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~  153 (312)
T d2b69a1          81 --YMYNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET  153 (312)
T ss_dssp             --HTTCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred             --HHhCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence              12334567889999999999876    3444 489999996433210              01245789999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhh-----------HHHHHH-hcCCCc------ccccccCChhhHHHHHHHhhcC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIY-----------TAAIEM-LTGGSA------DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~-----------t~~~~~-~~~~~~------~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                      +++..++++   |+.+..+.|+.+..           ..+... ......      .....+...+|+++++..++..
T Consensus       154 ~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         154 MCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             HHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence            999998875   67777777653221           111111 222211      1112345689999999888754

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.28  E-value=1.2e-11  Score=109.93  Aligned_cols=214  Identities=18%  Similarity=0.145  Sum_probs=126.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeE--EEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANI--VIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~V--vl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +++|||||+|.||++++++|+++|+.|  +...|++++              .......+.++.+|+++.++..++++  
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~--------------~~~~~~~~~~~~~d~~~~~~~~~~~~--   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--------------KEKIGGEADVFIGDITDADSINPAFQ--   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH--------------HHHTTCCTTEEECCTTSHHHHHHHHT--
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH--------------HHhccCCcEEEEeeeccccccccccc--
Confidence            689999999999999999999999764  445565431              23345578899999999998776653  


Q ss_pred             HHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCC
Q psy6113          88 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD  167 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  167 (406)
                           .+|.+||+|+..........+..                                                  ..
T Consensus        68 -----~~d~vi~~a~~~~~~~~~~~~~~--------------------------------------------------~~   92 (252)
T d2q46a1          68 -----GIDALVILTSAVPKMKPGFDPTK--------------------------------------------------GG   92 (252)
T ss_dssp             -----TCSEEEECCCCCCEECTTCCTTS--------------------------------------------------CC
T ss_pred             -----cceeeEEEEeeccccccccchhh--------------------------------------------------hh
Confidence                 68999999987654322211000                                                  00


Q ss_pred             CCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhh-HHHHHHHHHHHHhhcC
Q psy6113         168 TANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISK-YGMSMCALGMAEEFKG  246 (406)
Q Consensus       168 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK-aal~~l~~~la~e~~~  246 (406)
                      ........+.....+|+.++..+....    .....+.....++.....+.  .....|..++ .........+.   ..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~  163 (252)
T d2q46a1          93 RPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPD--HPLNKLGNGNILVWKRKAEQYL---AD  163 (252)
T ss_dssp             CCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTT--CGGGGGGGCCHHHHHHHHHHHH---HH
T ss_pred             hcccccccchhhhccccccceeecccc----ccccccccccccccccCCCC--cccccccccchhhhhhhhhhhh---hc
Confidence            012223334556678888888776655    33445677888776665443  1222222222 22222222222   23


Q ss_pred             CCeEEEEecchhhhhHHHH--HHhcCCC---cccccccCChhhHHHHHHHhhcCCCCCccceEE
Q psy6113         247 DNIAVNALWPRTAIYTAAI--EMLTGGS---ADAKATSRKPEIMADAAYYILSSNPPSLTGQFL  305 (406)
Q Consensus       247 ~gI~vn~v~PG~~~~t~~~--~~~~~~~---~~~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i  305 (406)
                      .|+++..+.||++......  .......   ......+...+|+|++++.++..+  ...|+.+
T Consensus       164 ~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~--~~~g~~~  225 (252)
T d2q46a1         164 SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE--EAKNKAF  225 (252)
T ss_dssp             SSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCG--GGTTEEE
T ss_pred             ccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCc--cccCcEE
Confidence            5789999999864332110  0000000   001122446899999999888642  2456655

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.26  E-value=3.4e-11  Score=114.76  Aligned_cols=160  Identities=16%  Similarity=0.109  Sum_probs=116.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      +..+|||||+|-||..++++|.++|++|++++|.......             ..-....+..+|+.+.+.+.++++   
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-------------~~~~~~~~~~~D~~~~~~~~~~~~---   78 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-------------EDMFCDEFHLVDLRVMENCLKVTE---   78 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-------------GGGTCSEEEECCTTSHHHHHHHHT---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-------------hhcccCcEEEeechhHHHHHHHhh---
Confidence            5569999999999999999999999999999876553221             011234667789988887655442   


Q ss_pred             HhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        89 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                          .+|.+||.|+......                                                            
T Consensus        79 ----~~d~Vih~a~~~~~~~------------------------------------------------------------   94 (363)
T d2c5aa1          79 ----GVDHVFNLAADMGGMG------------------------------------------------------------   94 (363)
T ss_dssp             ----TCSEEEECCCCCCCHH------------------------------------------------------------
T ss_pred             ----cCCeEeeccccccccc------------------------------------------------------------
Confidence                6899999998654321                                                            


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc----------------cCCchhhhHhhHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW----------------FKNHVAYTISKYG  232 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~----------------~~~~~~Y~asKaa  232 (406)
                        ...+.....+.+|+.++..++.++    ++.+-.++|++||........                ..+...|+.||.+
T Consensus        95 --~~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~  168 (363)
T d2c5aa1          95 --FIQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA  168 (363)
T ss_dssp             --HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred             --ccccccccccccccchhhHHHHhH----HhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence              123345667888999999988887    555556999999976543210                1134579999999


Q ss_pred             HHHHHHHHHHhhcCCCeEEEEecch
Q psy6113         233 MSMCALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       233 l~~l~~~la~e~~~~gI~vn~v~PG  257 (406)
                      .+.+++.+.+++   |+.+..+.|+
T Consensus       169 ~E~~~~~~~~~~---gl~~~ilR~~  190 (363)
T d2c5aa1         169 TEELCKHYNKDF---GIECRIGRFH  190 (363)
T ss_dssp             HHHHHHHHHHHH---CCEEEEEEEC
T ss_pred             HHHHHHHHHHHh---CCCEEEEEee
Confidence            999999888776   6777777764

>d2cfua1 d.106.1.3 (A:530-655) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: Alkylsulfatase C-terminal domain-like
domain: Alkylsulfatase SdsA1
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.23  E-value=2.4e-12  Score=104.44  Aligned_cols=71  Identities=23%  Similarity=0.306  Sum_probs=65.5

Q ss_pred             cceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHHh
Q psy6113         331 GSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGA  401 (406)
Q Consensus       331 g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~~  401 (406)
                      ..|++.+++|.+....+..+.+|||||+++.++|.+|+.|+++|++||++|||||+||...++||..+|+.
T Consensus        43 e~~~l~l~ngvl~~~~~~~~~~ad~tit~~~~~l~~ll~G~~~~~~a~~~g~l~i~Gd~~~~~~~~~~fd~  113 (126)
T d2cfua1          43 ENYLLELKNSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKLKSSGNPLLLGQLFGMLGD  113 (126)
T ss_dssp             EEEEEEEETTEEEEEETCCCTTCSEEEEECHHHHHHHHTTSSCHHHHHHTTSEEEEECTTHHHHHHTTBCC
T ss_pred             CeEEEEEeCCceecccCCCCCCCCEEEEEcHHHHHHHHcCCCCHHHHHHcCCEEEeCCHHHHHHHHHHhcC
Confidence            47999999999887777666789999999999999999999999999999999999999999999988764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.21  E-value=2.3e-10  Score=109.74  Aligned_cols=172  Identities=15%  Similarity=0.109  Sum_probs=117.6

Q ss_pred             EEEEecCCchHHHHHHHHHHH-cCCeEEEEecC---CCCCCCCcccHHHHHHHHHHc--------CCeeeeeeecCCChH
Q psy6113          11 TIFITGASRGIGKAIALKAAK-DGANIVIAAKT---AEPHPKLPGTIYSAAKEVEDA--------GGNCLPCIVDIRDEH   78 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~-~Ga~Vvl~~r~---~~~~~~~~~~i~~~~~~~~~~--------g~~~~~~~~Dl~~~~   78 (406)
                      .+|||||+|-||..++++|++ .|++|+++|+-   ...... .+........+...        .....++.+|++|.+
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDH-VETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTT-SCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchh-hhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            589999999999999999986 68999998741   111111 11122222333222        235778899999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEec
Q psy6113          79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVN  158 (406)
Q Consensus        79 ~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~  158 (406)
                      .++++++.    ..++|++||.|+.....                                                   
T Consensus        83 ~l~~~~~~----~~~~d~ViH~Aa~~~~~---------------------------------------------------  107 (383)
T d1gy8a_          83 FLNGVFTR----HGPIDAVVHMCAFLAVG---------------------------------------------------  107 (383)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCHH---------------------------------------------------
T ss_pred             Hhhhhhhc----cceeehhhccccccccc---------------------------------------------------
Confidence            88777754    46799999999965421                                                   


Q ss_pred             cccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC----------------ccCC
Q psy6113         159 NASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF----------------WFKN  222 (406)
Q Consensus       159 ~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~----------------~~~~  222 (406)
                                  ...+.....+++|+.++..++.++    ++.+..++++++|.......                ...+
T Consensus       108 ------------~~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p  171 (383)
T d1gy8a_         108 ------------ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSP  171 (383)
T ss_dssp             ------------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBC
T ss_pred             ------------ccccccccccccccccccccchhh----hccCCcccccccccccccccccccccccccccccccCCCC
Confidence                        122334567788999999998887    44555677777765432211                0124


Q ss_pred             chhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecch
Q psy6113         223 HVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR  257 (406)
Q Consensus       223 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  257 (406)
                      ...|+.||.+.+.+++.+...+   |+.+.++.|+
T Consensus       172 ~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~  203 (383)
T d1gy8a_         172 ESPYGESKLIAERMIRDCAEAY---GIKGICLRYF  203 (383)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred             CCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecc
Confidence            5789999999999998887765   5777766664

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.19  E-value=3.9e-11  Score=113.68  Aligned_cols=202  Identities=13%  Similarity=0.125  Sum_probs=129.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      |.+|||||+|-||..++++|.++|+.|.++.++.-....-...+    .  .-.+.++.++.+|++|.+.+..++.    
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----~--~~~~~~i~~~~~Di~d~~~~~~~~~----   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----E--AILGDRVELVVGDIADAELVDKLAA----   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----G--GGCSSSEEEEECCTTCHHHHHHHHT----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----H--HhhcCCeEEEEccCCCHHHHHHHHh----
Confidence            67999999999999999999999987655544321111000000    0  1124578999999999998877653    


Q ss_pred             hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCC
Q psy6113          90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA  169 (406)
Q Consensus        90 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  169 (406)
                         ..|.++|.|+.....                                                              
T Consensus        73 ---~~~~v~~~a~~~~~~--------------------------------------------------------------   87 (346)
T d1oc2a_          73 ---KADAIVHYAAESHND--------------------------------------------------------------   87 (346)
T ss_dssp             ---TCSEEEECCSCCCHH--------------------------------------------------------------
T ss_pred             ---hhhhhhhhhhccccc--------------------------------------------------------------
Confidence               567788888865321                                                              


Q ss_pred             CCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------------------ccCCchhhhH
Q psy6113         170 NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------------------WFKNHVAYTI  228 (406)
Q Consensus       170 ~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------------------~~~~~~~Y~a  228 (406)
                       ....+....+++|+.|..+++..+.    +.+ .++|++||...+...                     ...+...|+.
T Consensus        88 -~~~~~~~~~~~~N~~g~~nll~~~~----~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~  161 (346)
T d1oc2a_          88 -NSLNDPSPFIHTNFIGTYTLLEAAR----KYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSS  161 (346)
T ss_dssp             -HHHHCCHHHHHHHTHHHHHHHHHHH----HHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHH
T ss_pred             -chhhCcccceeeehHhHHhhhhhhc----ccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHH
Confidence             1123345678899999999988773    333 467777765433110                     0113467999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCeEEEEecchhhh----------hHHHHHHhcCCCc------ccccccCChhhHHHHHHHh
Q psy6113         229 SKYGMSMCALGMAEEFKGDNIAVNALWPRTAI----------YTAAIEMLTGGSA------DAKATSRKPEIMADAAYYI  292 (406)
Q Consensus       229 sKaal~~l~~~la~e~~~~gI~vn~v~PG~~~----------~t~~~~~~~~~~~------~~~~~~~~pe~vA~~v~~L  292 (406)
                      +|.+.+.+++...+++   |+++.++.|+.+.          ...+.........      .....+...+|+|++++.+
T Consensus       162 sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~  238 (346)
T d1oc2a_         162 TKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI  238 (346)
T ss_dssp             HHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHH
Confidence            9999999999888775   6888888774211          1111111111111      1222355789999998887


Q ss_pred             hcC
Q psy6113         293 LSS  295 (406)
Q Consensus       293 ~s~  295 (406)
                      +..
T Consensus       239 ~~~  241 (346)
T d1oc2a_         239 LTK  241 (346)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            753

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.12  E-value=1.9e-10  Score=107.65  Aligned_cols=202  Identities=14%  Similarity=0.142  Sum_probs=132.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEE------EEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIV------IAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vv------l~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      .+|||||+|-||..++++|+++|+.|.      ..++.......     .. ... .....++.++..|+++....... 
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~-----~~-~~~-~~~~~~~~~~~~d~~~~~~~~~~-   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-----AN-LAP-VDADPRLRFVHGDIRDAGLLARE-   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-----GG-GGG-GTTCTTEEEEECCTTCHHHHHHH-
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH-----hH-hhh-hhcCCCeEEEEeccccchhhhcc-
Confidence            389999999999999999999998544      33332211110     00 011 11245688999999999876543 


Q ss_pred             HHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                            ....|+++|.|+....                                                          
T Consensus        74 ------~~~~d~vi~~a~~~~~----------------------------------------------------------   89 (322)
T d1r6da_          74 ------LRGVDAIVHFAAESHV----------------------------------------------------------   89 (322)
T ss_dssp             ------TTTCCEEEECCSCCCH----------------------------------------------------------
T ss_pred             ------ccccceEEeecccccc----------------------------------------------------------
Confidence                  3478999999986432                                                          


Q ss_pred             cCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHH
Q psy6113         165 LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSM  235 (406)
Q Consensus       165 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~  235 (406)
                           ..........+++|+.++.++++++    .+.+..++|++||...+.+..         ..+...|+.||.+.+.
T Consensus        90 -----~~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          90 -----DRSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             -----HHHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             -----cccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence                 2223445667889999999999888    445557899999976543211         1245689999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEecchhhhh---------HHHHHHhcCCCcc-------cccccCChhhHHHHHHHhhcCC
Q psy6113         236 CALGMAEEFKGDNIAVNALWPRTAIY---------TAAIEMLTGGSAD-------AKATSRKPEIMADAAYYILSSN  296 (406)
Q Consensus       236 l~~~la~e~~~~gI~vn~v~PG~~~~---------t~~~~~~~~~~~~-------~~~~~~~pe~vA~~v~~L~s~~  296 (406)
                      +++.+++++   |+.+..+.|+.+-.         +.+.........-       ....+...+|+|+++..++...
T Consensus       161 ~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~  234 (322)
T d1r6da_         161 VARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (322)
T ss_dssp             HHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence            999998875   57777776642211         1112222221111       1123457899999999998653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.05  E-value=2.9e-10  Score=99.88  Aligned_cols=190  Identities=12%  Similarity=0.068  Sum_probs=116.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      -|.++||||||-||+.++++|+++|+  +|+...|+.....                 .+   +..+..|..++.     
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~-----------------~~---~~~~~~d~~~~~-----   56 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH-----------------PR---LDNPVGPLAELL-----   56 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC-----------------TT---EECCBSCHHHHG-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc-----------------cc---ccccccchhhhh-----
Confidence            48999999999999999999999998  5666666543211                 11   233444443321     


Q ss_pred             HHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccC
Q psy6113          87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT  166 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  166 (406)
                       ....+.+|.+|+++|.....                                                           
T Consensus        57 -~~~~~~~d~vi~~~g~~~~~-----------------------------------------------------------   76 (212)
T d2a35a1          57 -PQLDGSIDTAFCCLGTTIKE-----------------------------------------------------------   76 (212)
T ss_dssp             -GGCCSCCSEEEECCCCCHHH-----------------------------------------------------------
T ss_pred             -hccccchheeeeeeeeeccc-----------------------------------------------------------
Confidence             12235789999998854211                                                           


Q ss_pred             CCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcC
Q psy6113         167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG  246 (406)
Q Consensus       167 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  246 (406)
                            ...-....++|+.++..+++++    ++.+-.+++++||..+...    ....|..+|...+...+.       
T Consensus        77 ------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~~----~~~~y~~~K~~~E~~l~~-------  135 (212)
T d2a35a1          77 ------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK----SSIFYNRVKGELEQALQE-------  135 (212)
T ss_dssp             ------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT----CSSHHHHHHHHHHHHHTT-------
T ss_pred             ------cccccccccchhhhhhhccccc----ccccccccccccccccccc----cccchhHHHHHHhhhccc-------
Confidence                  1112356678888988888876    5566679999999776533    346799999887665442       


Q ss_pred             CCe-EEEEecchhhhhHH----HHHHhcCCCcc---cccccCChhhHHHHHHHhhcCCCCCccceEEEe
Q psy6113         247 DNI-AVNALWPRTAIYTA----AIEMLTGGSAD---AKATSRKPEIMADAAYYILSSNPPSLTGQFLID  307 (406)
Q Consensus       247 ~gI-~vn~v~PG~~~~t~----~~~~~~~~~~~---~~~~~~~pe~vA~~v~~L~s~~~~~~tG~~i~d  307 (406)
                      .+. +...+.|+.+....    ...........   ...+....+|+|++++.++.++.   .|..++.
T Consensus       136 ~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~---~g~~~~~  201 (212)
T d2a35a1         136 QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG---KGVRFVE  201 (212)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC---SEEEEEE
T ss_pred             cccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC---CCCEEEE
Confidence            233 46677898432110    00000000000   00122467999999999986533   4655543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.95  E-value=1.4e-08  Score=93.26  Aligned_cols=82  Identities=12%  Similarity=0.101  Sum_probs=60.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      +.+|||||+|-||+.++++|+++|++|+++.|+......     .............+.++.+|++|.+++.+.+.    
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-----~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~----   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNI-----DKVQMLLYFKQLGAKLIEASLDDHQRLVDALK----   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCH-----HHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccch-----hHHHHHhhhccCCcEEEEeecccchhhhhhcc----
Confidence            448999999999999999999999999999998664321     11111111224457888999999988766544    


Q ss_pred             hcCCccEEEecccc
Q psy6113          90 KFGGIDILVNNASA  103 (406)
Q Consensus        90 ~~g~iD~linnAG~  103 (406)
                         ..+.++++++.
T Consensus        75 ---~~~~~~~~~~~   85 (312)
T d1qyda_          75 ---QVDVVISALAG   85 (312)
T ss_dssp             ---TCSEEEECCCC
T ss_pred             ---Ccchhhhhhhh
Confidence               56788887764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.84  E-value=6.5e-08  Score=87.98  Aligned_cols=83  Identities=17%  Similarity=0.248  Sum_probs=61.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHH-cCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~-~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      -|.+|||||+|-||++++++|+++|++|++++|+.......    . ....+.. ....+.++..|+.+.....+.++  
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~----~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNS----E-KAQLLESFKASGANIVHGSIDDHASLVEAVK--   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTH----H-HHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccch----h-HHHHHHhhccCCcEEEEeecccchhhhhhhh--
Confidence            47799999999999999999999999999999987654331    1 1111221 23457778899999988766654  


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                           ..+.+|++++.
T Consensus        76 -----~~~~vi~~~~~   86 (307)
T d1qyca_          76 -----NVDVVISTVGS   86 (307)
T ss_dssp             -----TCSEEEECCCG
T ss_pred             -----hceeeeecccc
Confidence                 56788887764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.83  E-value=8.9e-09  Score=97.13  Aligned_cols=78  Identities=19%  Similarity=0.174  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +.|+++||||+|.||.+++++|+++|++|+++.|+..+.         ....+. ....+..+..|+.|..+...     
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~---------~~~~~~-~~~~v~~~~gD~~d~~~~~~-----   66 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL---------IAEELQ-AIPNVTLFQGPLLNNVPLMD-----   66 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH---------HHHHHH-TSTTEEEEESCCTTCHHHHH-----
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh---------hhhhhc-ccCCCEEEEeeCCCcHHHHH-----
Confidence            469999999999999999999999999999999987641         122222 23457889999999765322     


Q ss_pred             HHhcCCccEEEecc
Q psy6113          88 VDKFGGIDILVNNA  101 (406)
Q Consensus        88 ~~~~g~iD~linnA  101 (406)
                       ..+...|.++.+.
T Consensus        67 -~a~~~~~~~~~~~   79 (350)
T d1xgka_          67 -TLFEGAHLAFINT   79 (350)
T ss_dssp             -HHHTTCSEEEECC
T ss_pred             -HHhcCCceEEeec
Confidence             2235667666553

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.80  E-value=7.2e-13  Score=114.87  Aligned_cols=49  Identities=27%  Similarity=0.462  Sum_probs=37.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCee
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC   67 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~   67 (406)
                      +.|+||+|+||+++|+.|+++|++|++.+|++++       +++..+++...+...
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~-------~~~l~~~i~~~~~~~   51 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEK-------AEAKAAEYRRIAGDA   51 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH-------HHHHHHHHHHHHSSC
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHHHHHHHHhcCCCc
Confidence            5567888999999999999999999999998765       334555665544333

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.79  E-value=1.2e-08  Score=93.24  Aligned_cols=130  Identities=15%  Similarity=0.169  Sum_probs=91.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      +|||||+|-||.++++.|.++|. ++.++++...                        +..|++|.+.++++++..    
T Consensus         3 ILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------------------~~~Dl~~~~~~~~~i~~~----   53 (298)
T d1n2sa_           3 ILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------------------------FCGDFSNPKGVAETVRKL----   53 (298)
T ss_dssp             EEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------------------SCCCTTCHHHHHHHHHHH----
T ss_pred             EEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------------------ccCcCCCHHHHHHHHHHc----
Confidence            89999999999999999999997 4444554332                        246999999998888765    


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                       ++|++||+||......                                                               
T Consensus        54 -~~D~Vih~Aa~~~~~~---------------------------------------------------------------   69 (298)
T d1n2sa_          54 -RPDVIVNAAAHTAVDK---------------------------------------------------------------   69 (298)
T ss_dssp             -CCSEEEECCCCCCHHH---------------------------------------------------------------
T ss_pred             -CCCEEEEecccccccc---------------------------------------------------------------
Confidence             6899999999653211                                                               


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHH
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~  239 (406)
                      ..+.-...+++|+.+...+..++    ++. ..+++++||.....+.         ...+...|+.+|.+.+.+.+.
T Consensus        70 ~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_          70 AESEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             HTTCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence            12223567788999999988877    232 3577887776433221         012346899999887766544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.65  E-value=1e-07  Score=86.29  Aligned_cols=176  Identities=19%  Similarity=0.212  Sum_probs=110.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhc
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKF   91 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~   91 (406)
                      ++||||+|-||..++++|.++|++|+.++|+.                            +|++|.++++++++..    
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------~D~~d~~~~~~~l~~~----   51 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNEK----   51 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHHH----
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------ccCCCHHHHHHHHHHc----
Confidence            89999999999999999999999999988752                            3899999998887754    


Q ss_pred             CCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCC
Q psy6113          92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT  171 (406)
Q Consensus        92 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  171 (406)
                       ++|++||+|+....                                                               +.
T Consensus        52 -~~d~vih~a~~~~~---------------------------------------------------------------~~   67 (281)
T d1vl0a_          52 -KPNVVINCAAHTAV---------------------------------------------------------------DK   67 (281)
T ss_dssp             -CCSEEEECCCCCCH---------------------------------------------------------------HH
T ss_pred             -CCCEEEeecccccc---------------------------------------------------------------cc
Confidence             68999999886432                                                               11


Q ss_pred             chhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCC---------ccCCchhhhHhhHHHHHHHHHHHH
Q psy6113         172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPF---------WFKNHVAYTISKYGMSMCALGMAE  242 (406)
Q Consensus       172 ~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~la~  242 (406)
                      ........+..|+.....+...+..    .. ..++..||.......         ...+...|+.+|...+.+.+..  
T Consensus        68 ~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~--  140 (281)
T d1vl0a_          68 CEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL--  140 (281)
T ss_dssp             HHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH--
T ss_pred             ccccchhhccccccccccccccccc----cc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh--
Confidence            2233345566777777766665532    22 456666654322111         1234567999998876665432  


Q ss_pred             hhcCCCeEEEEecchhh------hhHHHHHHhcCCCc-----ccccccCChhhHHHHHHHhhcC
Q psy6113         243 EFKGDNIAVNALWPRTA------IYTAAIEMLTGGSA-----DAKATSRKPEIMADAAYYILSS  295 (406)
Q Consensus       243 e~~~~gI~vn~v~PG~~------~~t~~~~~~~~~~~-----~~~~~~~~pe~vA~~v~~L~s~  295 (406)
                           +.+...+.|+++      ....+.........     .....+...+|+++++.+++..
T Consensus       141 -----~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         141 -----NPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  199 (281)
T ss_dssp             -----CSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             -----CCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhh
Confidence                 334444555422      11112222211110     1122345789999999999864

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.40  E-value=5.3e-07  Score=82.09  Aligned_cols=146  Identities=17%  Similarity=0.156  Sum_probs=86.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH-
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD-   89 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~-   89 (406)
                      +|||||+|-||..++++|+++|+ .|+++++-... .+        ...+.         ..++.+......+...... 
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~--------~~~~~---------~~~~~~~~~~~~~~~~~~~~   63 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TK--------FVNLV---------DLNIADYMDKEDFLIQIMAG   63 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GG--------GHHHH---------TSCCSEEEEHHHHHHHHHTT
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-ch--------hhccc---------ccchhhhccchHHHHHHhhh
Confidence            79999999999999999999997 57777543221 10        01111         1223322222333443333 


Q ss_pred             -hcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccchhhHHHHHHHHHhhcCCcceEeccccccccCCC
Q psy6113          90 -KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDT  168 (406)
Q Consensus        90 -~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  168 (406)
                       .+..+++++|.|+.....                                                             
T Consensus        64 ~~~~~~~~i~~~aa~~~~~-------------------------------------------------------------   82 (307)
T d1eq2a_          64 EEFGDVEAIFHEGACSSTT-------------------------------------------------------------   82 (307)
T ss_dssp             CCCSSCCEEEECCSCCCTT-------------------------------------------------------------
T ss_pred             hcccchhhhhhhccccccc-------------------------------------------------------------
Confidence             345788888888743221                                                             


Q ss_pred             CCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCc---------cCCchhhhHhhHHHHHHHHH
Q psy6113         169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFW---------FKNHVAYTISKYGMSMCALG  239 (406)
Q Consensus       169 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~---------~~~~~~Y~asKaal~~l~~~  239 (406)
                          ........+.|+.+...+..++    +..+- ++++.||.....+..         ......|+.+|.+.+.+.+.
T Consensus        83 ----~~~~~~~~~~~~~~~~~~l~~~----~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_          83 ----EWDGKYMMDNNYQYSKELLHYC----LEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             ----CCCHHHHHHHTHHHHHHHHHHH----HHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHH
T ss_pred             ----cccccccccccccccccccccc----ccccc-cccccccccccccccccccccccccccccccccccchhhhhccc
Confidence                1123445667777777776665    33333 344444433322211         13457899999999999988


Q ss_pred             HHHhhc
Q psy6113         240 MAEEFK  245 (406)
Q Consensus       240 la~e~~  245 (406)
                      ++.++.
T Consensus       154 ~~~~~~  159 (307)
T d1eq2a_         154 ILPEAN  159 (307)
T ss_dssp             HGGGCS
T ss_pred             cccccc
Confidence            877754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.65  E-value=5.7e-05  Score=63.62  Aligned_cols=80  Identities=20%  Similarity=0.312  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|++++|+||++|+|.+.++-....|++|+.++|++++           .+.+++.|....+   |-.+++..+...+..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~-----------~~~~~~~Ga~~vi---~~~~~~~~~~~~~~~   94 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK-----------IAYLKQIGFDAAF---NYKTVNSLEEALKKA   94 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCSEEE---ETTSCSCHHHHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHH-----------HHHHHhhhhhhhc---ccccccHHHHHHHHh
Confidence            58999999999999999999999999999999887653           4455666655443   333333333332221


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        ..+++|+++++.|.
T Consensus        95 --~~~Gvd~v~D~vG~  108 (182)
T d1v3va2          95 --SPDGYDCYFDNVGG  108 (182)
T ss_dssp             --CTTCEEEEEESSCH
T ss_pred             --hcCCCceeEEecCc
Confidence              23479999999983

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.64  E-value=0.00016  Score=60.54  Aligned_cols=77  Identities=16%  Similarity=0.157  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.++||+||+||.|.+.++-....|++|+.+++++++           .+.++..|......+   .+.  ..+.+.. 
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k-----------~~~~~~lGa~~vi~~---~~~--~~~~~~~-   93 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-----------HDYLRVLGAKEVLAR---EDV--MAERIRP-   93 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-----------HHHHHHTTCSEEEEC---C------------
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH-----------HHHHHhcccceeeec---chh--HHHHHHH-
Confidence            48899999999999999999888999999999998876           234455565543321   111  1111111 


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                       ..-+++|+++.+.|
T Consensus        94 -~~~~gvD~vid~vg  107 (176)
T d1xa0a2          94 -LDKQRWAAAVDPVG  107 (176)
T ss_dssp             -CCSCCEEEEEECST
T ss_pred             -hhccCcCEEEEcCC
Confidence             12247999999888

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=8e-05  Score=62.15  Aligned_cols=77  Identities=27%  Similarity=0.370  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|++++|+||++++|...++.+...|++|+.+++++++           .+.+++.|....   .|.++++-.+    ++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~-----------~~~~~~~Ga~~v---i~~~~~~~~~----~i   89 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-----------QKIVLQNGAHEV---FNHREVNYID----KI   89 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-----------HHHHHHTTCSEE---EETTSTTHHH----HH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccc-----------cccccccCcccc---cccccccHHH----Hh
Confidence            68999999999999999999998999999999887543           344455665432   3666654333    33


Q ss_pred             HHhc--CCccEEEeccc
Q psy6113          88 VDKF--GGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~--g~iD~linnAG  102 (406)
                      .+..  .++|+++.+.|
T Consensus        90 ~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          90 KKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             HHHHCTTCEEEEEESCH
T ss_pred             hhhhccCCceEEeeccc
Confidence            3332  36999999988

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00026  Score=59.53  Aligned_cols=87  Identities=26%  Similarity=0.408  Sum_probs=62.0

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.++.++    ....++.+.... .......|+.+.+++...
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~----~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~   87 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDK----ALAFAQRVNENT-DCVVTVTDLADQQAFAEA   87 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHH----HHHHHHHHHHHS-SCEEEEEETTCHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHH----HHHHHHHHHhhc-CcceEeeecccccchhhh
Confidence            4689999999999 6999999999999998 78899998876432    122233333322 233456788888766544


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                      .       ...|++||+..+.
T Consensus        88 ~-------~~~diiIN~Tp~G  101 (182)
T d1vi2a1          88 L-------ASADILTNGTKVG  101 (182)
T ss_dssp             H-------HTCSEEEECSSTT
T ss_pred             h-------cccceeccccCCc
Confidence            3       2579999997654

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=6.6e-05  Score=65.49  Aligned_cols=82  Identities=24%  Similarity=0.284  Sum_probs=57.7

Q ss_pred             cccCCcEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeee
Q psy6113           5 GKLSGLTIFITGA----------------SRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCL   68 (406)
Q Consensus         5 ~~l~gk~alVTGa----------------s~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~   68 (406)
                      .+|+|+.+|||+|                ||-.|.++|+++..+|++|.++........                ...+.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----------------p~~~~   65 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----------------PPFVK   65 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----------------CTTEE
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc----------------ccccc
Confidence            5799999999988                678999999999999999998866543211                11122


Q ss_pred             eeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccC
Q psy6113          69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLT  107 (406)
Q Consensus        69 ~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~  107 (406)
                      .  ..+.+.++...   .+.+.+...|++|.+|++....
T Consensus        66 ~--~~~~t~~~m~~---~~~~~~~~~D~~i~aAAvsDf~   99 (223)
T d1u7za_          66 R--VDVMTALEMEA---AVNASVQQQNIFIGCAAVADYR   99 (223)
T ss_dssp             E--EECCSHHHHHH---HHHHHGGGCSEEEECCBCCSEE
T ss_pred             c--ceehhhHHHHH---HHHhhhccceeEeeeechhhhh
Confidence            2  24445555444   4444555689999999987543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.42  E-value=0.00021  Score=59.11  Aligned_cols=82  Identities=18%  Similarity=0.293  Sum_probs=58.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|+| +|++|...++.+...|++|+++++++++           .+..++.+....+.. | ...++.....+.+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r-----------~~~a~~~ga~~~~~~-~-~~~~~~~~~~~~~   91 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRR-----------LEVAKNCGADVTLVV-D-PAKEEESSIIERI   91 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHTTCSEEEEC-C-TTTSCHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHH-----------HHHHHHcCCcEEEec-c-ccccccchhhhhh
Confidence            578899997 5799999999999999999999998764           334455565443322 2 2223344555666


Q ss_pred             HHhcC-CccEEEecccc
Q psy6113          88 VDKFG-GIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g-~iD~linnAG~  103 (406)
                      .+..| .+|++|.++|.
T Consensus        92 ~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          92 RSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HHHSSSCCSEEEECSCC
T ss_pred             hcccccCCceeeecCCC
Confidence            66654 69999999985

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.41  E-value=0.00023  Score=60.19  Aligned_cols=87  Identities=9%  Similarity=0.116  Sum_probs=56.9

Q ss_pred             CcE-EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLT-IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~-alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      |++ ++++||++|+|.+.++-.-..|++|+.+.|+.+.       .++..+.+++.|....+..-+.. ..+..+.+.++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~-------~~~~~~~~~~lGad~vi~~~~~~-~~~~~~~v~~~  100 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN-------LDEVVASLKELGATQVITEDQNN-SREFGPTIKEW  100 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT-------HHHHHHHHHHHTCSEEEEHHHHH-CGGGHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc-------cchHHhhhhhccccEEEeccccc-hhHHHHHHHHH
Confidence            554 5557999999999998888889999998887765       23445566677765544322221 22233333443


Q ss_pred             HH-hcCCccEEEecccc
Q psy6113          88 VD-KFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~-~~g~iD~linnAG~  103 (406)
                      .. ..+++|+++++.|.
T Consensus       101 ~~~~g~~vdvv~D~vg~  117 (189)
T d1gu7a2         101 IKQSGGEAKLALNCVGG  117 (189)
T ss_dssp             HHHHTCCEEEEEESSCH
T ss_pred             HhhccCCceEEEECCCc
Confidence            33 34579999999883

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.37  E-value=0.0012  Score=58.99  Aligned_cols=109  Identities=16%  Similarity=0.070  Sum_probs=68.1

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccc-cceEEec
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR-GTYLVKA  133 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  133 (406)
                      +.+..+.+.|.++.  -++.++.+..+++.+++.+.++.-.+.+.. -.......              ... ..+..+.
T Consensus        17 aiA~~la~~Ga~V~--i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-d~~~~~~~--------------~~~~~~~~~dv   79 (284)
T d1e7wa_          17 SIAEGLHAEGYAVC--LHYHRSAAEANALSATLNARRPNSAITVQA-DLSNVATA--------------PVSGADGSAPV   79 (284)
T ss_dssp             HHHHHHHHTTCEEE--EEESSCHHHHHHHHHHHHHHSTTCEEEEEC-CCSSSCBC--------------CCC----CCCB
T ss_pred             HHHHHHHHcCCEEE--EEeCCCHHHHHHHHHHHHhhcCCceEEEEe-eccccccc--------------ccccccccccC
Confidence            35666777776654  457788889999999888776543333322 11111000              011 1234567


Q ss_pred             cchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHH
Q psy6113         134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN  180 (406)
Q Consensus       134 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~  180 (406)
                      ++..++++.++.+.+.||+||+||||||.....++.+.+.++|+...
T Consensus        80 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~  126 (284)
T d1e7wa_          80 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV  126 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC----------
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhh
Confidence            78888999999999999999999999999999999999998887643

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.0002  Score=59.76  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|+||++|+|...++-....|++|+.+++++++           .+.+++.|....   .|-++++-.+++.+ +
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k-----------~~~~~~lGa~~v---i~~~~~d~~~~v~~-~   92 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK-----------AQSALKAGAWQV---INYREEDLVERLKE-I   92 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH-----------HHHHHHHTCSEE---EETTTSCHHHHHHH-H
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHH-----------HHHHHhcCCeEE---EECCCCCHHHHHHH-H
Confidence            48999999999999999999999999999999998764           344555665432   36666544433322 1


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       ..-..+|+++.+.|.
T Consensus        93 -t~g~g~d~v~d~~g~  107 (179)
T d1qora2          93 -TGGKKVRVVYDSVGR  107 (179)
T ss_dssp             -TTTCCEEEEEECSCG
T ss_pred             -hCCCCeEEEEeCccH
Confidence             122469999999884

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.27  E-value=0.00017  Score=60.35  Aligned_cols=77  Identities=22%  Similarity=0.298  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|++++|+||++++|...++.+...|++|++++++.++           .+.+++.|....   .|-.+++-    .+++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~-----------~~~l~~~Ga~~v---i~~~~~~~----~~~v   86 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-----------REMLSRLGVEYV---GDSRSVDF----ADEI   86 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-----------HHHHHTTCCSEE---EETTCSTH----HHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccc-----------cccccccccccc---ccCCccCH----HHHH
Confidence            48999999999999999999888899999999887543           345556665432   34445433    3334


Q ss_pred             HHhc--CCccEEEeccc
Q psy6113          88 VDKF--GGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~--g~iD~linnAG  102 (406)
                      .+..  .++|+++.+.|
T Consensus        87 ~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          87 LELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             HHHTTTCCEEEEEECCC
T ss_pred             HHHhCCCCEEEEEeccc
Confidence            4433  36999999998

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.26  E-value=0.00038  Score=57.79  Aligned_cols=74  Identities=19%  Similarity=0.284  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +|++++|+||++++|...++.+...|++|+.+++++++.           +..++.|....+   |..+.      .+++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-----------~~~~~lGa~~~i---~~~~~------~~~~   86 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-----------ALPLALGAEEAA---TYAEV------PERA   86 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-----------HHHHHTTCSEEE---EGGGH------HHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccc-----------ccccccccceee---ehhhh------hhhh
Confidence            689999999999999999998888999999999887642           234455654332   32221      1222


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                       ...+++|+++++.|
T Consensus        87 -~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          87 -KAWGGLDLVLEVRG  100 (171)
T ss_dssp             -HHTTSEEEEEECSC
T ss_pred             -hccccccccccccc
Confidence             23457999999877

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.22  E-value=0.00027  Score=58.39  Aligned_cols=74  Identities=18%  Similarity=0.321  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++|.++|.|| |.+|+.+|+.|+++|++|++.+|+.++           ++++............+..+.......+.  
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~-----------a~~l~~~~~~~~~~~~~~~~~~~~~~~i~--   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLES-----------AKKLSAGVQHSTPISLDVNDDAALDAEVA--   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHH-----------HHHHHTTCTTEEEEECCTTCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHH-----------HHHHHhcccccccccccccchhhhHhhhh--
Confidence            3689999987 999999999999999999999999764           33444444445555566666655554432  


Q ss_pred             HHhcCCccEEEec
Q psy6113          88 VDKFGGIDILVNN  100 (406)
Q Consensus        88 ~~~~g~iD~linn  100 (406)
                           ..|.++..
T Consensus        67 -----~~~~~i~~   74 (182)
T d1e5qa1          67 -----KHDLVISL   74 (182)
T ss_dssp             -----TSSEEEEC
T ss_pred             -----ccceeEee
Confidence                 34555544

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.12  E-value=0.00038  Score=58.31  Aligned_cols=80  Identities=25%  Similarity=0.356  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++           .+..++.|....+   |.++. +..+..+.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~-----------~~~a~~lGa~~vi---~~~~~-~~~~~~~~   91 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNR-----------LKLAEEIGADLTL---NRRET-SVEERRKA   91 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHH-----------HHHHHHTTCSEEE---ETTTS-CHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccc-----------ccccccccceEEE---ecccc-chHHHHHH
Confidence            6899999997 7999999999999998 79999998764           3344555654332   33322 22233344


Q ss_pred             HHHhc--CCccEEEecccc
Q psy6113          87 AVDKF--GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~  103 (406)
                      +.+..  .++|++|.++|.
T Consensus        92 i~~~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          92 IMDITHGRGADFILEATGD  110 (182)
T ss_dssp             HHHHTTTSCEEEEEECSSC
T ss_pred             HHHhhCCCCceEEeecCCc
Confidence            44433  259999999985

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.05  E-value=0.0004  Score=57.00  Aligned_cols=75  Identities=25%  Similarity=0.436  Sum_probs=53.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++++.++|.|+ |++|+.+++.|..+|+ ++.++.|+.++          +.+.....+.++.       +.+++.+ 
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~k----------a~~l~~~~~~~~~-------~~~~~~~-   80 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYER----------AVELARDLGGEAV-------RFDELVD-   80 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHH----------HHHHHHHHTCEEC-------CGGGHHH-
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHH----------HHHHHHhhhcccc-------cchhHHH-
Confidence            3689999999998 9999999999999998 68899888654          2233334454332       2223222 


Q ss_pred             HHHHHHhcCCccEEEeccccc
Q psy6113          84 VNAAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~~  104 (406)
                            .....|++|++.+..
T Consensus        81 ------~l~~~Divi~atss~   95 (159)
T d1gpja2          81 ------HLARSDVVVSATAAP   95 (159)
T ss_dssp             ------HHHTCSEEEECCSSS
T ss_pred             ------HhccCCEEEEecCCC
Confidence                  223689999998843

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.0013  Score=54.34  Aligned_cols=80  Identities=18%  Similarity=0.297  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++           .+..++.|...... .+-.+..+   ..+.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~r-----------l~~a~~~Ga~~~~~-~~~~~~~~---~~~~   89 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATR-----------LSKAKEIGADLVLQ-ISKESPQE---IARK   89 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH-----------HHHHHHTTCSEEEE-CSSCCHHH---HHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHH-----------HHHHHHhCCccccc-cccccccc---cccc
Confidence            4788999987 9999999999999999 79999988764           33344556543222 22233333   3444


Q ss_pred             HHHhcC-CccEEEecccc
Q psy6113          87 AVDKFG-GIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g-~iD~linnAG~  103 (406)
                      +...++ ++|++|.++|.
T Consensus        90 ~~~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          90 VEGQLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHHHHTSCCSEEEECSCC
T ss_pred             ccccCCCCceEEEeccCC
Confidence            444444 79999999995

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.88  E-value=0.00033  Score=58.01  Aligned_cols=76  Identities=16%  Similarity=0.204  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++.++||+||+||+|.+.++-....|++|+.+.+++++           .+.+++.|.......-         ....+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k-----------~~~~~~lGad~vi~~~---------~~~~~~   82 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA-----------ADYLKQLGASEVISRE---------DVYDGT   82 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST-----------HHHHHHHTCSEEEEHH---------HHCSSC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH-----------HHHHHhhcccceEecc---------chhchh
Confidence            46689999999999999998888889999999998876           3445566665433211         111111


Q ss_pred             HHh--cCCccEEEecccc
Q psy6113          88 VDK--FGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~--~g~iD~linnAG~  103 (406)
                      ...  -+++|+++.+.|-
T Consensus        83 ~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          83 LKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             CCSSCCCCEEEEEESCCT
T ss_pred             hhcccCCCceEEEecCcH
Confidence            111  2479999999884

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.00072  Score=48.14  Aligned_cols=38  Identities=26%  Similarity=0.325  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ++.+++|+||++|+|....+-+...|++|+.+.+++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            68899999999999999999888899999999888765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.83  E-value=0.0033  Score=51.54  Aligned_cols=77  Identities=21%  Similarity=0.313  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++           .+..++.|....+...+-.+  .       .
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k-----------~~~a~~lGa~~~i~~~~~~~--~-------~   85 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRK-----------REDAMKMGADHYIATLEEGD--W-------G   85 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTT-----------HHHHHHHTCSEEEEGGGTSC--H-------H
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhH-----------HHHhhccCCcEEeeccchHH--H-------H
Confidence            5889999987 899999988887889999999998876           23345566543332222211  1       1


Q ss_pred             HHhcCCccEEEecccccc
Q psy6113          88 VDKFGGIDILVNNASAIS  105 (406)
Q Consensus        88 ~~~~g~iD~linnAG~~~  105 (406)
                      ....+..|+++.+.|...
T Consensus        86 ~~~~~~~d~vi~~~~~~~  103 (168)
T d1piwa2          86 EKYFDTFDLIVVCASSLT  103 (168)
T ss_dssp             HHSCSCEEEEEECCSCST
T ss_pred             HhhhcccceEEEEecCCc
Confidence            123457999999887654

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0015  Score=53.94  Aligned_cols=40  Identities=23%  Similarity=0.320  Sum_probs=36.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+++||.++|.|+ ||-+++++..|.+.|.+|+++.|+.++
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~k   53 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSR   53 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHH
Confidence            3578999999998 889999999999999999999998765

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.70  E-value=0.0013  Score=54.06  Aligned_cols=80  Identities=15%  Similarity=0.278  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+++++|...++.+...|+ +|+++++++++           .+..++.|....   .|-++.+-.++..+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~-----------~~~~~~~Ga~~~---i~~~~~~~~~~~~~~   92 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA-----------VEAAKRAGADYV---INASMQDPLAEIRRI   92 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH-----------HHHHHHHTCSEE---EETTTSCHHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhh-----------HHHHHHcCCcee---eccCCcCHHHHHHHH
Confidence            578999999999999999999999995 88888887653           334455565432   244444444443322


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      .  .-+.+|++|.++|.
T Consensus        93 ~--~~~~~d~vid~~g~  107 (170)
T d1jvba2          93 T--ESKGVDAVIDLNNS  107 (170)
T ss_dssp             T--TTSCEEEEEESCCC
T ss_pred             h--hcccchhhhccccc
Confidence            2  12469999999985

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0012  Score=54.99  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      ++.+++|+||+||+|...++-....|++|+.++|++++           .+.+++.|....+.+-|......       +
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k-----------~~~~~~lGad~vi~~~~~~~~~~-------l   92 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST-----------HEYLKSLGASRVLPRDEFAESRP-------L   92 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG-----------HHHHHHHTEEEEEEGGGSSSCCS-------S
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH-----------HHHHHhhccccccccccHHHHHH-------H
Confidence            34589999999999999999888999999999998775           23344556554433322211110       0


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                        .-...|.+|.+.|-
T Consensus        93 --~~~~~~~vvD~Vgg  106 (177)
T d1o89a2          93 --EKQVWAGAIDTVGD  106 (177)
T ss_dssp             --CCCCEEEEEESSCH
T ss_pred             --HhhcCCeeEEEcch
Confidence              11346888888773

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.55  E-value=0.011  Score=52.41  Aligned_cols=91  Identities=18%  Similarity=0.179  Sum_probs=64.7

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCC-ccEEEecccccccCCCCCCChhhhhhhhhhccccceEEec
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA  133 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~-iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (406)
                      +.+..+.+.|.++..  +| .+.+.++++.+++.+.... .++                              -.+.++.
T Consensus        20 aia~~la~~Ga~V~l--~~-r~~~~l~~~~~~l~~~~~~~~~~------------------------------~~~~~Dv   66 (272)
T d1xkqa_          20 TTAILFAQEGANVTI--TG-RSSERLEETRQIILKSGVSEKQV------------------------------NSVVADV   66 (272)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHTTTCCGGGE------------------------------EEEECCT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCCCCce------------------------------EEEEccC
Confidence            356677777877654  45 4677888888877653111 111                              1234566


Q ss_pred             cchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHH
Q psy6113         134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL  178 (406)
Q Consensus       134 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~  178 (406)
                      ++..+++++++.+.+.||+||+||||||.....++.....+....
T Consensus        67 s~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~  111 (272)
T d1xkqa_          67 TTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGID  111 (272)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHH
T ss_pred             CCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHH
Confidence            778889999999999999999999999999888887777665433

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.41  E-value=0.015  Score=44.09  Aligned_cols=39  Identities=21%  Similarity=0.216  Sum_probs=34.5

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .+++||+++|.|++ .+|..-++.|++.|++|++++....
T Consensus         8 l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence            47899999999995 5999999999999999999876554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.0022  Score=53.71  Aligned_cols=78  Identities=18%  Similarity=0.264  Sum_probs=49.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      +++|+|+||+||+|...++-.-..|+++++. +++.++          ........|....+   |..+++. .+.++++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~----------~~~l~~~~gad~vi---~~~~~~~-~~~~~~~   96 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEK----------CLFLTSELGFDAAV---NYKTGNV-AEQLREA   96 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHH----------HHHHHHHSCCSEEE---ETTSSCH-HHHHHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHH----------HhhhhhcccceEEe---eccchhH-HHHHHHH
Confidence            4899999999999999998888899975554 444332          12222334544322   4444433 3333333


Q ss_pred             HHhcCCccEEEeccc
Q psy6113          88 VDKFGGIDILVNNAS  102 (406)
Q Consensus        88 ~~~~g~iD~linnAG  102 (406)
                      .  -.++|+++.+.|
T Consensus        97 ~--~~GvDvv~D~vG  109 (187)
T d1vj1a2          97 C--PGGVDVYFDNVG  109 (187)
T ss_dssp             C--TTCEEEEEESSC
T ss_pred             h--ccCceEEEecCC
Confidence            2  246999999998

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.33  E-value=0.0052  Score=50.28  Aligned_cols=74  Identities=19%  Similarity=0.328  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+ ||+|...++.+...|+++++++++.++           .+..++.|....   .|..+.+...      
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~-----------~~~a~~lGad~~---i~~~~~~~~~------   88 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK-----------REAAKALGADEV---VNSRNADEMA------   88 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG-----------HHHHHHHTCSEE---EETTCHHHHH------
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhH-----------HHHHhccCCcEE---EECchhhHHH------
Confidence            5889999986 899999998888899999999887764           233455565432   3555554322      


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                       ...+++|++|.++|.
T Consensus        89 -~~~~~~D~vid~~g~  103 (168)
T d1uufa2          89 -AHLKSFDFILNTVAA  103 (168)
T ss_dssp             -TTTTCEEEEEECCSS
T ss_pred             -HhcCCCceeeeeeec
Confidence             233579999999985

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.30  E-value=0.0088  Score=49.13  Aligned_cols=81  Identities=17%  Similarity=0.285  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++           .+...+.|....+...|-  .+.+.+..+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k-----------~~~a~~~Ga~~~i~~~~~--~~~~~~~~~~   93 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDK-----------FAKAKEVGATECVNPQDY--KKPIQEVLTE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-----------HHHHHHTTCSEEECGGGC--SSCHHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHH-----------HHHHHHhCCeeEEecCCc--hhHHHHHHHH
Confidence            5889999999 6899999999999996 88888888775           233344554433322222  2223333333


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                      .  ..+++|++|.+.|..
T Consensus        94 ~--~~~G~D~vid~~G~~  109 (176)
T d2jhfa2          94 M--SNGGVDFSFEVIGRL  109 (176)
T ss_dssp             H--TTSCBSEEEECSCCH
T ss_pred             H--hcCCCCEEEecCCch
Confidence            3  235899999999963

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.28  E-value=0.0042  Score=48.72  Aligned_cols=60  Identities=20%  Similarity=0.258  Sum_probs=46.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|.|+ |-+|+.+++.|.++|+.|++++++++.           .+.+.... ...++..|.++++..+++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~-----------~~~~~~~~-~~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI-----------CKKASAEI-DALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHHC-SSEEEESCTTSHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhh-----------hhhhhhhh-hhhhccCcccchhhhhhc
Confidence            4788998 899999999999999999999998763           33333322 355778899999876654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.26  E-value=0.0026  Score=52.63  Aligned_cols=77  Identities=14%  Similarity=0.212  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ ||+|...++.+...|+ +|+++++++++           .+..++.|....   +|..+.+..+    +
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r-----------~~~a~~lGa~~~---i~~~~~~~~~----~   87 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPIC-----------VEAAKFYGATDI---LNYKNGHIED----Q   87 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHH-----------HHHHHHHTCSEE---ECGGGSCHHH----H
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccchhhh-----------HHHHHhhCcccc---ccccchhHHH----H
Confidence            5788999986 8999999999999998 79999887654           233445564322   3444433332    3


Q ss_pred             HHHhc--CCccEEEecccc
Q psy6113          87 AVDKF--GGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~--g~iD~linnAG~  103 (406)
                      +.+..  .++|++|.++|.
T Consensus        88 v~~~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          88 VMKLTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             HHHHTTTSCEEEEEECSSC
T ss_pred             HHHHhhccCcceEEEccCC
Confidence            33333  359999999995

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.015  Score=51.42  Aligned_cols=106  Identities=15%  Similarity=0.196  Sum_probs=70.3

Q ss_pred             HHHHHHHHc-CCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEec
Q psy6113          55 SAAKEVEDA-GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA  133 (406)
Q Consensus        55 ~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (406)
                      +++..+.+. |.++...   -++.+..+++.+++.+..+.+.+                                +.++.
T Consensus        18 a~A~~la~~~g~~Vi~~---~r~~~~~~~~~~~l~~~~~~~~~--------------------------------~~~Dv   62 (275)
T d1wmaa1          18 AIVRDLCRLFSGDVVLT---ARDVTRGQAAVQQLQAEGLSPRF--------------------------------HQLDI   62 (275)
T ss_dssp             HHHHHHHHHSSSEEEEE---ESSHHHHHHHHHHHHHTTCCCEE--------------------------------EECCT
T ss_pred             HHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHHHhcCCcEEE--------------------------------EEEec
Confidence            345555554 5444332   35778888888888776444322                                23456


Q ss_pred             cchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhH
Q psy6113         134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK  199 (406)
Q Consensus       134 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  199 (406)
                      ++..++++.++.+.+.||+||+||||||+..    .....+.....++..+.-.+.-...+...+.
T Consensus        63 s~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l  124 (275)
T d1wmaa1          63 DDLQSIRALRDFLRKEYGGLDVLVNNAGIAF----KVADPTPFHIQAEVTMKTNFFGTRDVCTELL  124 (275)
T ss_dssp             TCHHHHHHHHHHHHHHHSSEEEEEECCCCCC----CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             CCHHHHHHHHHHHHHhcCCcEEEEEcCCcCC----CCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6778889999999999999999999999763    2344455556666666655555555555554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.0024  Score=46.99  Aligned_cols=39  Identities=15%  Similarity=0.141  Sum_probs=34.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +|+||+++|.|. +.-|+++|+.|+++|++|++.+.+...
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~   40 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTP   40 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCc
Confidence            689999999999 567999999999999999999886653

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.15  E-value=0.011  Score=48.70  Aligned_cols=81  Identities=12%  Similarity=0.173  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ +|+|...++.+...|+ +|++++++++++           +..++.|....+..-|-.+.  .+...+ 
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-----------~~Ak~~GA~~~in~~~~~~~--~~~~~~-   93 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF-----------EKAMAVGATECISPKDSTKP--ISEVLS-   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-----------HHHHHHTCSEEECGGGCSSC--HHHHHH-
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH-----------HHHHhcCCcEEECccccchH--HHHHHH-
Confidence            5899999987 8999999999999995 899999998863           33455566554433332221  222222 


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                      . ...+++|++|.+.|..
T Consensus        94 ~-~~g~G~d~vi~~~g~~  110 (176)
T d1d1ta2          94 E-MTGNNVGYTFEVIGHL  110 (176)
T ss_dssp             H-HHTSCCCEEEECSCCH
T ss_pred             H-hccccceEEEEeCCch
Confidence            1 1234799999999953

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.14  E-value=0.0038  Score=51.51  Aligned_cols=78  Identities=24%  Similarity=0.246  Sum_probs=53.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAV   84 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~   84 (406)
                      ..+++|.++|.|+ ||-+++++..|.+.+.+|+++.|+.+++       +..++.+... ..+.....|-.         
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a-------~~l~~~~~~~-~~~~~~~~~~~---------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT-------KELAERFQPY-GNIQAVSMDSI---------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH-------HHHHHHHGGG-SCEEEEEGGGC---------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHH-------HHHHHHHhhc-cccchhhhccc---------
Confidence            3678999999988 7889999999999888999999997652       2333443322 23333333311         


Q ss_pred             HHHHHhcCCccEEEecccccc
Q psy6113          85 NAAVDKFGGIDILVNNASAIS  105 (406)
Q Consensus        85 ~~i~~~~g~iD~linnAG~~~  105 (406)
                           .....|++||+....-
T Consensus        76 -----~~~~~diiIN~tp~g~   91 (171)
T d1p77a1          76 -----PLQTYDLVINATSAGL   91 (171)
T ss_dssp             -----CCSCCSEEEECCCC--
T ss_pred             -----cccccceeeecccccc
Confidence                 1346899999987653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.02  E-value=0.022  Score=50.04  Aligned_cols=87  Identities=17%  Similarity=0.211  Sum_probs=53.0

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCC-ccEEEecccccccCCCCCCChhhhhhhhhhccccceEEec
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA  133 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~-iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (406)
                      +.+..+.+.|.++..  +| .+.+.++++.+++.+.... -++.                              .+.++.
T Consensus        20 aia~~la~~Ga~V~~--~~-r~~~~l~~~~~~l~~~~~~~~~~~------------------------------~~~~Dv   66 (264)
T d1spxa_          20 ATAVLFAREGAKVTI--TG-RHAERLEETRQQILAAGVSEQNVN------------------------------SVVADV   66 (264)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHHTTCCGGGEE------------------------------EEECCT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCCcCceE------------------------------EEEccC
Confidence            356677777876544  45 4678888888888664221 1111                              223456


Q ss_pred             cchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchh
Q psy6113         134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK  174 (406)
Q Consensus       134 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~  174 (406)
                      ++..+.++.++.+.+.||+||+||||||.....++.+...+
T Consensus        67 t~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~  107 (264)
T d1spxa_          67 TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTA  107 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCC-------------
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEeecccccccCCcccccccc
Confidence            77888999999999999999999999998765554444333

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.014  Score=52.25  Aligned_cols=26  Identities=15%  Similarity=0.102  Sum_probs=22.9

Q ss_pred             CchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113          18 SRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus        18 s~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      ||..|.++|+.|..+|+.|+++.+..
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecCC
Confidence            56789999999999999999987653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.97  E-value=0.022  Score=49.58  Aligned_cols=100  Identities=21%  Similarity=0.099  Sum_probs=58.6

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++  +-+|...+...+++.+++.+..+.--..+. .....                          +..
T Consensus        16 aia~~la~~G~~V--vi~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------------------~~~   66 (266)
T d1mxha_          16 SIAVRLHQQGFRV--VVHYRHSEGAAQRLVAELNAARAGSAVLCK-GDLSL--------------------------SSS   66 (266)
T ss_dssp             HHHHHHHHTTCEE--EEEESSCHHHHHHHHHHHHHHSTTCEEEEE-CCCSS--------------------------STT
T ss_pred             HHHHHHHHCCCEE--EEEECCchHHHHHHHHHHHhhcCCceEEEe-ccccc--------------------------chh
Confidence            3566677778655  456777788888888888776543222111 11100                          011


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhh
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN  183 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN  183 (406)
                      .....++.++.+.+.||++|++|||||+....++.+...+.+....++.
T Consensus        67 ~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~  115 (266)
T d1mxha_          67 LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPI  115 (266)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CH
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhccccc
Confidence            1233567778889999999999999999988877777666665555443

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.96  E-value=0.0063  Score=49.52  Aligned_cols=77  Identities=19%  Similarity=0.276  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|++++|.|+ +++|...++.+...|++|+++++++++           .+..++.|....   .|.++.+..+.+    
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~-----------~~~a~~~Ga~~~---i~~~~~~~~~~~----   87 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK-----------LELARKLGASLT---VNARQEDPVEAI----   87 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-----------HHHHHHTTCSEE---EETTTSCHHHHH----
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH-----------HHhhhccCcccc---ccccchhHHHHH----
Confidence            5889999886 999999999888899999999988654           334455665432   355555444433    


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .+..++.|..|-+++.
T Consensus        88 ~~~~~g~~~~i~~~~~  103 (166)
T d1llua2          88 QRDIGGAHGVLVTAVS  103 (166)
T ss_dssp             HHHHSSEEEEEECCSC
T ss_pred             HHhhcCCccccccccc
Confidence            2333445555555553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.94  E-value=0.0079  Score=49.30  Aligned_cols=80  Identities=18%  Similarity=0.207  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ +|+|...++.+...|+ +|+.+++++++           .+..++.|....+..-+  +.+.+.+.++.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k-----------~~~ak~lGa~~~i~~~~--~~~~~~~~~~~   93 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK-----------FARAKEFGATECINPQD--FSKPIQEVLIE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-----------HHHHHHHTCSEEECGGG--CSSCHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHH-----------HHHHHHhCCcEEEeCCc--hhhHHHHHHHH
Confidence            5899999998 5999999999999997 56666666554           23345556544332212  12233333333


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      .  ..+++|++|.+.|.
T Consensus        94 ~--~~~g~D~vid~~G~  108 (176)
T d2fzwa2          94 M--TDGGVDYSFECIGN  108 (176)
T ss_dssp             H--TTSCBSEEEECSCC
T ss_pred             H--cCCCCcEeeecCCC
Confidence            2  23579999999985

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.89  E-value=0.01  Score=48.82  Aligned_cols=78  Identities=15%  Similarity=0.278  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEE-EEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIV-IAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vv-l~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ +++|...++.+...|++++ ++++++++           .+..++.|... +  .|..+++..++ +.+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k-----------~~~a~~~Ga~~-~--i~~~~~~~~~~-i~~   91 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR-----------LELAKQLGATH-V--INSKTQDPVAA-IKE   91 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH-----------HHHHHHHTCSE-E--EETTTSCHHHH-HHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHH-----------HHHHHHcCCeE-E--EeCCCcCHHHH-HHH
Confidence            5889999997 8999999999988998655 55665543           33344556432 2  34555433322 222


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      +  .-+++|++|.+.|.
T Consensus        92 ~--t~gg~D~vid~~G~  106 (174)
T d1f8fa2          92 I--TDGGVNFALESTGS  106 (174)
T ss_dssp             H--TTSCEEEEEECSCC
T ss_pred             H--cCCCCcEEEEcCCc
Confidence            2  12579999999995

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.86  E-value=0.0081  Score=49.50  Aligned_cols=80  Identities=20%  Similarity=0.278  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChH-HHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEH-AVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~-~v~~~~~   85 (406)
                      .|.+++|.|+ +|+|...++.+...|+ +|+++++++++           .+..++.|....+   |.++.+ .+.+...
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~k-----------l~~a~~lGa~~~i---~~~~~d~~~~~~~~   91 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDK-----------FPKAIELGATECL---NPKDYDKPIYEVIC   91 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-----------HHHHHHTTCSEEE---CGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHH-----------HHHHHHcCCcEEE---cCCCchhHHHHHHH
Confidence            5889999986 8999999999999997 78888888775           2334556655433   322222 1222222


Q ss_pred             HHHHhcCCccEEEeccccc
Q psy6113          86 AAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~  104 (406)
                      ..  .-+++|++|-++|..
T Consensus        92 ~~--~~~G~d~vid~~g~~  108 (174)
T d1p0fa2          92 EK--TNGGVDYAVECAGRI  108 (174)
T ss_dssp             HH--TTSCBSEEEECSCCH
T ss_pred             Hh--cCCCCcEEEEcCCCc
Confidence            21  235799999999853

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.84  E-value=0.0043  Score=48.63  Aligned_cols=60  Identities=13%  Similarity=0.185  Sum_probs=45.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      |.++|.|+ |-+|+.+|+.|.++|+.|++++.+++.           .+++...+.  ..+..|.++++.++++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~-----------~~~~~~~~~--~~~~gd~~~~~~l~~a   60 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK-----------VNAYASYAT--HAVIANATEENELLSL   60 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH-----------HHHTTTTCS--EEEECCTTCTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHH-----------HHHHHHhCC--cceeeecccchhhhcc
Confidence            45777877 789999999999999999999998753           344444443  3456899998876553

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.83  E-value=0.02  Score=50.03  Aligned_cols=74  Identities=22%  Similarity=0.238  Sum_probs=54.1

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+++..+++.+++.+..+++..                                +.++.+
T Consensus        16 aia~~la~~Ga~V~~--~~-r~~~~l~~~~~~i~~~g~~~~~--------------------------------~~~Dv~   60 (255)
T d1gega_          16 AIALRLVKDGFAVAI--AD-YNDATAKAVASEINQAGGHAVA--------------------------------VKVDVS   60 (255)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCcEEE--------------------------------EEeeCC
Confidence            356677777877644  45 3678888888888665333211                                234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..++++.++.+.+.||+||+||||||..
T Consensus        61 ~~~~v~~~~~~~~~~~g~iDilVnnAG~~   89 (255)
T d1gega_          61 DRDQVFAAVEQARKTLGGFDVIVNNAGVA   89 (255)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCccEEEeccccc
Confidence            77889999999999999999999999964

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.79  E-value=0.011  Score=48.60  Aligned_cols=80  Identities=20%  Similarity=0.291  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCC-hHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRD-EHAVQSAVN   85 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~-~~~v~~~~~   85 (406)
                      .|.+++|.|+ ||||...++.+...|+ +|+++++++++           .+..++.|....+   |... ++..+...+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r-----------~~~a~~~Ga~~~i---~~~~~~~~~~~~~~   92 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEK-----------FPKAKALGATDCL---NPRELDKPVQDVIT   92 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-----------HHHHHHTTCSEEE---CGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHH-----------HHHHHHhCCCccc---CCccchhhhhhhHh
Confidence            5789999975 9999999999999998 57778887765           2334445554332   2221 222333333


Q ss_pred             HHHHhcCCccEEEeccccc
Q psy6113          86 AAVDKFGGIDILVNNASAI  104 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~  104 (406)
                      ..  ..+++|++|.++|..
T Consensus        93 ~~--~~~G~d~vie~~G~~  109 (174)
T d1e3ia2          93 EL--TAGGVDYSLDCAGTA  109 (174)
T ss_dssp             HH--HTSCBSEEEESSCCH
T ss_pred             hh--hcCCCcEEEEecccc
Confidence            22  235899999999953

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=95.70  E-value=0.025  Score=49.41  Aligned_cols=75  Identities=23%  Similarity=0.298  Sum_probs=54.4

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+++.++++.+++.+..+++..                                +.++.+
T Consensus        17 aia~~la~~Ga~V~i--~~-r~~~~l~~~~~~l~~~g~~~~~--------------------------------~~~Dvs   61 (257)
T d2rhca1          17 EIARRLGKEGLRVFV--CA-RGEEGLRTTLKELREAGVEADG--------------------------------RTCDVR   61 (257)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCcEEE--------------------------------EEeecC
Confidence            356677777877644  45 3678888888888654322211                                234556


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..+.++.++.+.+.||+||+||||||...
T Consensus        62 ~~~~v~~~~~~~~~~~g~iDilVnnAG~~~   91 (257)
T d2rhca1          62 SVPEIEALVAAVVERYGPVDVLVNNAGRPG   91 (257)
T ss_dssp             CHHHHHHHHHHHHHHTCSCSEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEecccccC
Confidence            778899999999999999999999999653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.56  E-value=0.054  Score=42.87  Aligned_cols=33  Identities=21%  Similarity=0.362  Sum_probs=28.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEecCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAKTA   43 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~   43 (406)
                      .+.|+||+|.+|.++|..|+.+|.  ++++.+.++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~   36 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc
Confidence            478899999999999999999985  699998764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.55  E-value=0.012  Score=48.26  Aligned_cols=79  Identities=16%  Similarity=0.261  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ +++|...++.+...|+ +|+++++++++           .+..++.+....+   |-+ .+..+...+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k-----------~~~~~~~ga~~~i---~~~-~~~~~~~~~~   95 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEK-----------LKLAERLGADHVV---DAR-RDPVKQVMEL   95 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHH-----------HHHHHHTTCSEEE---ETT-SCHHHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHH-----------HHHHhhcccceee---cCc-ccHHHHHHHh
Confidence            5889999886 9999999998888887 66667777653           3344555553322   332 2333333321


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                      .  ...++|++|.++|..
T Consensus        96 ~--~~~g~d~vid~~g~~  111 (172)
T d1h2ba2          96 T--RGRGVNVAMDFVGSQ  111 (172)
T ss_dssp             T--TTCCEEEEEESSCCH
T ss_pred             h--CCCCceEEEEecCcc
Confidence            1  123699999999953

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.52  E-value=0.027  Score=48.83  Aligned_cols=76  Identities=24%  Similarity=0.308  Sum_probs=55.7

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++.  -.|.++.+..+++.+++.+..+++.                                .+.++.+
T Consensus        16 a~a~~la~~Ga~V~--i~~~~~~~~~~~~~~~~~~~g~~~~--------------------------------~~~~Dv~   61 (244)
T d1edoa_          16 AIALSLGKAGCKVL--VNYARSAKAAEEVSKQIEAYGGQAI--------------------------------TFGGDVS   61 (244)
T ss_dssp             HHHHHHHHTTCEEE--EEESSCHHHHHHHHHHHHHHTCEEE--------------------------------EEECCTT
T ss_pred             HHHHHHHHCCCEEE--EEeCCCHHHHHHHHHHHHHcCCcEE--------------------------------EEeCCCC
Confidence            35666777776653  4578888888888888865422221                                1234556


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++.++.+.+.||+||+||||||...
T Consensus        62 ~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~   91 (244)
T d1edoa_          62 KEADVEAMMKTAIDAWGTIDVVVNNAGITR   91 (244)
T ss_dssp             SHHHHHHHHHHHHHHSSCCSEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCcccccccccc
Confidence            777889999999999999999999999664

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.38  E-value=0.035  Score=45.19  Aligned_cols=80  Identities=16%  Similarity=0.248  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ +|+|...+..++..|+ +|+.+++++++           .+..++.|....+..-+-.+  .+++..+.
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~r-----------l~~a~~~GAd~~in~~~~~~--~~~~~~~~   93 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDK-----------FEKAKVFGATDFVNPNDHSE--PISQVLSK   93 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-----------HHHHHHTTCCEEECGGGCSS--CHHHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHH-----------HHHHHHcCCcEEEcCCCcch--hHHHHHHh
Confidence            5889999986 7788888888888887 68888888765           33445566544332222211  12222222


Q ss_pred             HHHhcCCccEEEecccc
Q psy6113          87 AVDKFGGIDILVNNASA  103 (406)
Q Consensus        87 i~~~~g~iD~linnAG~  103 (406)
                      .  .-+++|+++.++|.
T Consensus        94 ~--~~~G~d~vid~~G~  108 (175)
T d1cdoa2          94 M--TNGGVDFSLECVGN  108 (175)
T ss_dssp             H--HTSCBSEEEECSCC
T ss_pred             h--ccCCcceeeeecCC
Confidence            2  22479999999995

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=95.38  E-value=0.029  Score=49.19  Aligned_cols=76  Identities=17%  Similarity=0.192  Sum_probs=54.5

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++  +-+|.++++..+++.+++.+..+++..                                +.++.+
T Consensus        22 aia~~la~~G~~V--v~~~r~~~~~~~~~~~~~~~~g~~~~~--------------------------------~~~Dvt   67 (261)
T d1geea_          22 SMAIRFATEKAKV--VVNYRSKEDEANSVLEEIKKVGGEAIA--------------------------------VKGDVT   67 (261)
T ss_dssp             HHHHHHHHTTCEE--EEEESSCHHHHHHHHHHHHHTTCEEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEE--EEEeCCcHHHHHHHHHHHHhcCCcEEE--------------------------------EEccCC
Confidence            3566777777665  445777777788888877654222211                                233556


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..+++++++.+.+.||+||+||||||...
T Consensus        68 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~   97 (261)
T d1geea_          68 VESDVINLVQSAIKEFGKLDVMINNAGLEN   97 (261)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEeeccceecC
Confidence            777889999999999999999999999653

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.36  E-value=0.03  Score=48.94  Aligned_cols=77  Identities=25%  Similarity=0.347  Sum_probs=56.5

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++  +-+|.++.+..+++.+++.+.++. +++.                              +.++.+
T Consensus        19 aiA~~la~~Ga~V--~~~~r~~~~~~~~~~~~~~~~~g~-~~~~------------------------------~~~Dv~   65 (260)
T d1x1ta1          19 GIATALAAQGADI--VLNGFGDAAEIEKVRAGLAAQHGV-KVLY------------------------------DGADLS   65 (260)
T ss_dssp             HHHHHHHHTTCEE--EEECCSCHHHHHHHHHHHHHHHTS-CEEE------------------------------ECCCTT
T ss_pred             HHHHHHHHCCCEE--EEEeCCcHHHHHHHHHHHHHhcCC-cEEE------------------------------EECCCC
Confidence            3566777777664  556888888888888888766431 2211                              223456


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++.++.+.+.||+||+||||||...
T Consensus        66 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~   95 (260)
T d1x1ta1          66 KGEAVRGLVDNAVRQMGRIDILVNNAGIQH   95 (260)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCcEEEeeccccc
Confidence            777889999999999999999999999753

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.35  E-value=0.018  Score=48.28  Aligned_cols=80  Identities=19%  Similarity=0.178  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      .|.+++|.|+ +++|...+..+...|+ +|+++++++++           .+..++.|.....   |-.+.+ ..+.+.+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~r-----------l~~a~~~Ga~~~~---~~~~~~-~~~~i~~   88 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPAR-----------LAHAKAQGFEIAD---LSLDTP-LHEQIAA   88 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH-----------HHHHHHTTCEEEE---TTSSSC-HHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchh-----------hHhhhhccccEEE---eCCCcC-HHHHHHH
Confidence            5889999987 7999888888878887 78888887654           3344555654422   333332 2222222


Q ss_pred             HHHhcCCccEEEeccccc
Q psy6113          87 AVDKFGGIDILVNNASAI  104 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~  104 (406)
                      + ..-...|++|.+.|..
T Consensus        89 ~-t~g~g~D~vid~vG~~  105 (195)
T d1kola2          89 L-LGEPEVDCAVDAVGFE  105 (195)
T ss_dssp             H-HSSSCEEEEEECCCTT
T ss_pred             H-hCCCCcEEEEECcccc
Confidence            2 1234799999999954

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.34  E-value=0.0032  Score=52.15  Aligned_cols=39  Identities=44%  Similarity=0.674  Sum_probs=34.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+++||.|+|.|+ ||.+++++..|.+.| +|.++.|+.++
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~k   52 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEK   52 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhH
Confidence            4689999999988 689999999998777 89999998765

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.27  E-value=0.046  Score=43.40  Aligned_cols=41  Identities=20%  Similarity=0.095  Sum_probs=35.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ++..=|.+.|.||.|-+|..+|+.|.++|++|.+.+|+...
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            44455789999999999999999999999999999998753

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=95.26  E-value=0.048  Score=43.28  Aligned_cols=36  Identities=19%  Similarity=0.396  Sum_probs=29.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~   45 (406)
                      .+.+.|.|+ |.+|..+|..|+.+|  .+|++.|+++++
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~   42 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDR   42 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccch
Confidence            446677786 889999999999998  489999998754

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.16  E-value=0.012  Score=48.06  Aligned_cols=37  Identities=19%  Similarity=0.392  Sum_probs=33.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            6788999988 8999999999999997 79999998764

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.12  E-value=0.02  Score=46.32  Aligned_cols=77  Identities=23%  Similarity=0.293  Sum_probs=49.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++           .+..++.|.....   |-++.+...    .+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r-----------~~~~k~~Ga~~~~---~~~~~~~~~----~~   87 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK-----------LELAKELGADLVV---NPLKEDAAK----FM   87 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH-----------HHHHHHTTCSEEE---CTTTSCHHH----HH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHH-----------hhhhhhcCcceec---ccccchhhh----hc
Confidence            5788999875 899999999999999999999887654           3445556654332   333332222    22


Q ss_pred             HHhcCCccEEEecccc
Q psy6113          88 VDKFGGIDILVNNASA  103 (406)
Q Consensus        88 ~~~~g~iD~linnAG~  103 (406)
                      .+.....|.+|.+++.
T Consensus        88 ~~~~~~~~~~v~~~~~  103 (168)
T d1rjwa2          88 KEKVGGVHAAVVTAVS  103 (168)
T ss_dssp             HHHHSSEEEEEESSCC
T ss_pred             ccccCCCceEEeecCC
Confidence            2333455566666663

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.07  E-value=0.05  Score=47.28  Aligned_cols=75  Identities=23%  Similarity=0.383  Sum_probs=54.0

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++...  | .+.+..++..+++.+.++. ++.                              .+.++.+
T Consensus        20 aia~~la~~Ga~V~i~--~-r~~~~~~~~~~~l~~~~g~-~~~------------------------------~~~~Dv~   65 (251)
T d1vl8a_          20 GIAQGLAEAGCSVVVA--S-RNLEEASEAAQKLTEKYGV-ETM------------------------------AFRCDVS   65 (251)
T ss_dssp             HHHHHHHHTTCEEEEE--E-SCHHHHHHHHHHHHHHHCC-CEE------------------------------EEECCTT
T ss_pred             HHHHHHHHCCCEEEEE--E-CCHHHHHHHHHHHHHHhCC-cEE------------------------------EEEccCC
Confidence            3566777778776544  4 4667778888887766542 111                              1234556


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..++++.++.+.+.||+||+||||||..
T Consensus        66 ~~~~v~~~~~~~~~~~g~iDiLVnnAG~~   94 (251)
T d1vl8a_          66 NYEEVKKLLEAVKEKFGKLDTVVNAAGIN   94 (251)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            77888999999999999999999999964

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.05  E-value=0.098  Score=41.46  Aligned_cols=38  Identities=18%  Similarity=0.333  Sum_probs=31.8

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      -.++.+.|.|+ |.+|..+|..|+..|.  +|++.|+++++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            45667888897 8999999999999985  79999988654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.059  Score=46.95  Aligned_cols=77  Identities=18%  Similarity=0.192  Sum_probs=56.9

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+++.++++.+++.+...+-.++.                              +.++.+
T Consensus        25 aiA~~la~~G~~Vv~--~~-r~~~~l~~~~~~l~~~~~~~~~~~------------------------------~~~Dls   71 (257)
T d1xg5a_          25 AVARALVQQGLKVVG--CA-RTVGNIEELAAECKSAGYPGTLIP------------------------------YRCDLS   71 (257)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHHTTCSSEEEE------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCCceEEE------------------------------EEccCC
Confidence            456777778877644  45 578899999998877643222221                              234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++.++.+.+.||+||+||||||...
T Consensus        72 ~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~  101 (257)
T d1xg5a_          72 NEEDILSMFSAIRSQHSGVDICINNAGLAR  101 (257)
T ss_dssp             CHHHHHHHHHHHHHHHCCCSEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEecccccC
Confidence            778899999999999999999999999664

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.99  E-value=0.048  Score=47.36  Aligned_cols=50  Identities=16%  Similarity=0.204  Sum_probs=37.6

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHH
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN  180 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~  180 (406)
                      ++.++..+.++.++.+.+.||+||+||||||..+..+......+.....+
T Consensus        65 ~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~  114 (256)
T d1ulua_          65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDW  114 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHH
T ss_pred             cccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhh
Confidence            34566778899999999999999999999998766555544444444433

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.95  E-value=0.087  Score=41.66  Aligned_cols=33  Identities=33%  Similarity=0.461  Sum_probs=29.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC--eEEEEecCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA--NIVIAAKTAE   44 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~   44 (406)
                      +.|+||+|.+|.++|..|+.+|.  ++++.++++.
T Consensus         3 V~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             EEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            78999999999999999999994  8999998753

>d2hv2a1 d.106.1.4 (A:287-397) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: EF1021 C-terminal domain-like
domain: Hypothetical protein EF1021
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.92  E-value=0.015  Score=44.17  Aligned_cols=69  Identities=22%  Similarity=0.374  Sum_probs=52.9

Q ss_pred             CcceEEec-cCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHH
Q psy6113         330 EGSWHIDL-KTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMG  400 (406)
Q Consensus       330 ~g~w~~dl-k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~  400 (406)
                      .|.|.+.+ ++|.+.+.+.......+..|+|+-.+|-.|..|-..|..+...|+|  +||-...-.|+.+|.
T Consensus        32 ~G~~~l~~~~~G~~~~~~~~~~~~~~~d~~l~I~~Ls~l~~G~~~~~~l~~~g~i--~~~~~~l~~L~~~f~  101 (111)
T d2hv2a1          32 EGIWTITIDEQGKATVTKGAAEKEGTAALKADIQTWTQLFLGYRSAETLSFYERL--QGDATIAQRLGQRLV  101 (111)
T ss_dssp             CEEEEEEECSSSCEEEEESCC----CCSEEEEHHHHHHHHHTSSCHHHHHHTTSS--EECHHHHHHHHHHSC
T ss_pred             CcEEEEEEcCCCcEEEEecccCCCCCceEEEcHHHHHHHHhCCCCHHHHHHcCCC--cCCHHHHHHHHHHcC
Confidence            58999998 5788777665433334566778889999999999999999999997  567777777887774

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=94.91  E-value=0.053  Score=47.36  Aligned_cols=74  Identities=23%  Similarity=0.307  Sum_probs=53.6

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +++..+.+.|.++..  +| .+.+.++++.+++.+..+++..                                +.++.+
T Consensus        20 aia~~la~~Ga~V~~--~~-r~~~~l~~~~~~~~~~g~~~~~--------------------------------~~~Dv~   64 (260)
T d1zema1          20 ATALRLAEEGTAIAL--LD-MNREALEKAEASVREKGVEARS--------------------------------YVCDVT   64 (260)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHTTTSCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCcEEE--------------------------------EEccCC
Confidence            356677777877644  56 4677888888877654333211                                234556


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..++++.++.+.+.||+||++|||||..
T Consensus        65 ~~~~v~~~~~~~~~~~g~iDilVnnaG~~   93 (260)
T d1zema1          65 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQ   93 (260)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCeehhhhccc
Confidence            77889999999999999999999999954

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.90  E-value=0.0087  Score=47.94  Aligned_cols=37  Identities=16%  Similarity=0.316  Sum_probs=33.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      .+++||++||.|| |.+|..-++.|++.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3689999999999 559999999999999999999654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=94.89  E-value=0.069  Score=46.54  Aligned_cols=76  Identities=21%  Similarity=0.354  Sum_probs=53.8

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +++..+.+.|.++..  +|. +.+.+++..+++.+..+.-.++.                              +.++.+
T Consensus        19 aia~~la~~Ga~V~i--~~r-~~~~l~~~~~~~~~~~~~~~~~~------------------------------~~~Dvt   65 (258)
T d1iy8a_          19 ATAVRLAAEGAKLSL--VDV-SSEGLEASKAAVLETAPDAEVLT------------------------------TVADVS   65 (258)
T ss_dssp             HHHHHHHHTTCEEEE--EES-CHHHHHHHHHHHHHHCTTCCEEE------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EEC-CHHHHHHHHHHHHhhCCCCeEEE------------------------------EeccCC
Confidence            356677777876644  454 56777777777766543322211                              234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..+.++.++.+.+.||+||+||||||+.
T Consensus        66 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~   94 (258)
T d1iy8a_          66 DEAQVEAYVTATTERFGRIDGFFNNAGIE   94 (258)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence            77889999999999999999999999964

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.87  E-value=0.16  Score=41.38  Aligned_cols=24  Identities=25%  Similarity=0.362  Sum_probs=21.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDG   33 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~G   33 (406)
                      ..+.||||+|.||.+++..|++..
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~   48 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGE   48 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCc
Confidence            359999999999999999999853

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.84  E-value=0.058  Score=46.94  Aligned_cols=74  Identities=24%  Similarity=0.266  Sum_probs=54.1

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+.+.++++.+++.+..++...                                +.++.+
T Consensus        26 aia~~la~~Ga~V~~--~~-r~~~~~~~~~~~l~~~g~~~~~--------------------------------~~~Dvs   70 (255)
T d1fmca_          26 EIAITFATAGASVVV--SD-INADAANHVVDEIQQLGGQAFA--------------------------------CRCDIT   70 (255)
T ss_dssp             HHHHHHHTTTCEEEE--EE-SCHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHHcCCcEEE--------------------------------EEccCC
Confidence            356667777776644  45 4778888888888764333211                                234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..+.+++++.+.+.||+||+||||||..
T Consensus        71 ~~~~~~~~~~~~~~~~g~iDilvnnAG~~   99 (255)
T d1fmca_          71 SEQELSALADFAISKLGKVDILVNNAGGG   99 (255)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEeeeCCcCC
Confidence            77788999999999999999999999964

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.71  E-value=0.012  Score=48.40  Aligned_cols=92  Identities=14%  Similarity=0.146  Sum_probs=59.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCccc--------HHHHHHHHHHcCCeeeeeeecCCChHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGT--------IYSAAKEVEDAGGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~--------i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~   81 (406)
                      +.+-|.|- |-+|.++|++|+++|++|++.+|++++.+++.+.        -....+++...-.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            34566776 8899999999999999999999998653321000        00011222222223344555677888888


Q ss_pred             HHHHHHHHhcCCccEEEeccc
Q psy6113          82 SAVNAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linnAG  102 (406)
                      ...+.+.....+=+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888776655566666654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.67  E-value=0.055  Score=46.96  Aligned_cols=74  Identities=23%  Similarity=0.233  Sum_probs=53.0

Q ss_pred             HHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEeccc
Q psy6113          56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQ  135 (406)
Q Consensus        56 ~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (406)
                      .+..+.+.|.++..  +| .+.+.++++.+++.+..+++..                                +.++.++
T Consensus        26 ~a~~la~~Ga~V~~--~~-r~~~~l~~~~~~l~~~g~~~~~--------------------------------~~~Dvt~   70 (251)
T d2c07a1          26 IAKMLAKSVSHVIC--IS-RTQKSCDSVVDEIKSFGYESSG--------------------------------YAGDVSK   70 (251)
T ss_dssp             HHHHHTTTSSEEEE--EE-SSHHHHHHHHHHHHTTTCCEEE--------------------------------EECCTTC
T ss_pred             HHHHHHHcCCEEEE--EE-CCHHHHHHHHHHHHhcCCcEEE--------------------------------EEccCCC
Confidence            45666666766544  45 4778888888887554222211                                2345667


Q ss_pred             hhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         136 GLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       136 ~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ..+.++.++.+.+.||+||+||||||...
T Consensus        71 ~~~v~~~~~~~~~~~g~iDilvnnag~~~   99 (251)
T d2c07a1          71 KEEISEVINKILTEHKNVDILVNNAGITR   99 (251)
T ss_dssp             HHHHHHHHHHHHHHCSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHhcCCceeeeecccccc
Confidence            78889999999999999999999999654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=94.48  E-value=0.25  Score=38.69  Aligned_cols=37  Identities=19%  Similarity=0.162  Sum_probs=27.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEPHP   47 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~   47 (406)
                      .|+++ .|+ |.+|.++|..|+.+|.  ++++.++++++++
T Consensus         2 ~KI~I-IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~   40 (142)
T d1y6ja1           2 SKVAI-IGA-GFVGASAAFTMALRQTANELVLIDVFKEKAI   40 (142)
T ss_dssp             CCEEE-ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CC
T ss_pred             CeEEE-ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccc
Confidence            34444 587 9999999999999985  7999999987643

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.45  E-value=0.076  Score=47.46  Aligned_cols=75  Identities=21%  Similarity=0.235  Sum_probs=49.3

Q ss_pred             HHHHHHHHcCCeeeeeeec------CCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccc
Q psy6113          55 SAAKEVEDAGGNCLPCIVD------IRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT  128 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~D------l~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (406)
                      +.+..+.+.|.++.....+      ..+.+..+++++++......                                   
T Consensus        22 aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------   66 (302)
T d1gz6a_          22 AYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-----------------------------------   66 (302)
T ss_dssp             HHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-----------------------------------
T ss_pred             HHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccc-----------------------------------
Confidence            3566777778776554322      23455666666666543221                                   


Q ss_pred             eEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ...+..+..+.++.++.+.+.||+||+||||||+..
T Consensus        67 ~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~  102 (302)
T d1gz6a_          67 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR  102 (302)
T ss_dssp             EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC
T ss_pred             cccccchHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence            123334455678899999999999999999999764

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.17  Score=43.47  Aligned_cols=75  Identities=21%  Similarity=0.297  Sum_probs=56.0

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+.++.+.|.++..  +|. +.+.++++.+++.+..+++..                                +.++.+
T Consensus        22 ~ia~~la~~G~~V~l--~~r-~~~~l~~~~~~~~~~~~~~~~--------------------------------~~~Dvs   66 (244)
T d1yb1a_          22 LTAYEFAKLKSKLVL--WDI-NKHGLEETAAKCKGLGAKVHT--------------------------------FVVDCS   66 (244)
T ss_dssp             HHHHHHHHTTCEEEE--EES-CHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EEC-CHHHHHHHHHHHHhcCCcEEE--------------------------------EEeeCC
Confidence            456777777877654  555 678888888888764333222                                334566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..+.+..++.+.+.||++|++|||||...
T Consensus        67 ~~~~v~~~~~~i~~~~g~idilinnag~~~   96 (244)
T d1yb1a_          67 NREDIYSSAKKVKAEIGDVSILVNNAGVVY   96 (244)
T ss_dssp             CHHHHHHHHHHHHHHTCCCSEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCceeEeeccccc
Confidence            778889999999999999999999999764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=94.24  E-value=0.17  Score=44.38  Aligned_cols=48  Identities=23%  Similarity=0.306  Sum_probs=35.8

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEeccccccccCC-CCCCchhhHHH
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD-TANTPLKKYDL  178 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~  178 (406)
                      ++.++..+.++.+..+.+.||++|++|||||.....+ +.+.+.+..+.
T Consensus        58 ~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~  106 (276)
T d1bdba_          58 GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDA  106 (276)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHH
T ss_pred             cccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhh
Confidence            3556677889999999999999999999999875543 33444444443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.15  E-value=0.098  Score=45.91  Aligned_cols=76  Identities=26%  Similarity=0.309  Sum_probs=54.3

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCC-ccEEEecccccccCCCCCCChhhhhhhhhhccccceEEec
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKA  133 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~-iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (406)
                      +.+..+.+.|.++...  | .+.+.++++.+++.+..+. ..+                              -.+.++.
T Consensus        19 aia~~la~~Ga~V~~~--~-r~~~~l~~~~~~i~~~~~~~~~~------------------------------~~~~~Dv   65 (274)
T d1xhla_          19 SAAVIFAKEGAQVTIT--G-RNEDRLEETKQQILKAGVPAEKI------------------------------NAVVADV   65 (274)
T ss_dssp             HHHHHHHHTTCEEEEE--E-SCHHHHHHHHHHHHHTTCCGGGE------------------------------EEEECCT
T ss_pred             HHHHHHHHCCCEEEEE--E-CCHHHHHHHHHHHHHcCCCCcce------------------------------EEEEeeC
Confidence            3566777778776544  5 4677888888888664221 111                              1233456


Q ss_pred             cchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         134 SQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       134 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++..++++.++.+.+.||+||++|||||..
T Consensus        66 ~~~~~v~~~~~~~~~~~G~iDilVnnAG~~   95 (274)
T d1xhla_          66 TEASGQDDIINTTLAKFGKIDILVNNAGAN   95 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCceEEEeecccc
Confidence            678889999999999999999999999954

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.01  Score=49.70  Aligned_cols=38  Identities=26%  Similarity=0.357  Sum_probs=32.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK   48 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~   48 (406)
                      |.+.|.|+ |-+|..+|..++.+|++|++.+++++.+++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~   42 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK   42 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHH
Confidence            67888888 669999999999999999999999875443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.01  E-value=0.004  Score=50.68  Aligned_cols=33  Identities=21%  Similarity=0.369  Sum_probs=27.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +-|.|- |-+|.++|+.|+++|++|++.+|++++
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~   35 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEA   35 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcch
Confidence            344444 889999999999999999999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=93.90  E-value=0.088  Score=45.28  Aligned_cols=76  Identities=20%  Similarity=0.193  Sum_probs=52.2

Q ss_pred             HHHHHHHcCCee-----eeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceE
Q psy6113          56 AAKEVEDAGGNC-----LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL  130 (406)
Q Consensus        56 ~~~~~~~~g~~~-----~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (406)
                      .+..+.+.|.++     ..+.++ .+.+.++++.+++.+..++...                                +.
T Consensus        17 ia~~la~~G~~~~~~~~~v~~~~-r~~~~l~~~~~~~~~~g~~~~~--------------------------------~~   63 (240)
T d2bd0a1          17 IALEFARAARHHPDFEPVLVLSS-RTAADLEKISLECRAEGALTDT--------------------------------IT   63 (240)
T ss_dssp             HHHHHHHHTTTCTTCCEEEEEEE-SCHHHHHHHHHHHHTTTCEEEE--------------------------------EE
T ss_pred             HHHHHHHhCccccccCcEEEEEe-CCHHHHHHHHHHHHhcCCcEEE--------------------------------EE
Confidence            455666666542     233344 4677888888877654222211                                23


Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ++.++..++++.++.+.+.||++|+||||||...
T Consensus        64 ~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~   97 (240)
T d2bd0a1          64 ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR   97 (240)
T ss_dssp             CCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCcceeeccccccc
Confidence            4566778899999999999999999999999754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.78  E-value=0.099  Score=39.91  Aligned_cols=39  Identities=21%  Similarity=0.221  Sum_probs=33.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      ++|.++|.|| |-+|..+|..|++.|.+|.++.|.+..+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~l~   67 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRPLG   67 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcccc
Confidence            4678888877 79999999999999999999988876543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=93.78  E-value=0.13  Score=44.69  Aligned_cols=75  Identities=20%  Similarity=0.281  Sum_probs=53.3

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+.+.++++.+++.+..++...                                +.++.+
T Consensus        23 aia~~la~~Ga~V~~--~~-r~~~~l~~~~~~~~~~g~~~~~--------------------------------~~~Dv~   67 (259)
T d2ae2a_          23 GIVEELASLGASVYT--CS-RNQKELNDCLTQWRSKGFKVEA--------------------------------SVCDLS   67 (259)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHHTTCEEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCCceE--------------------------------EEeeCC
Confidence            356677777877644  45 4788888888888664322221                                223455


Q ss_pred             chhhHHHHHHHHHhhcC-CcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFG-GIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g-~id~li~~ag~~~  164 (406)
                      +..+.++.++.+.+.|+ ++|++|||||...
T Consensus        68 ~~~~v~~~~~~~~~~~~~~idilvnnAG~~~   98 (259)
T d2ae2a_          68 SRSERQELMNTVANHFHGKLNILVNNAGIVI   98 (259)
T ss_dssp             CHHHHHHHHHHHHHHTTTCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCceEEEECCceec
Confidence            67788899999999987 8999999999653

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=93.77  E-value=0.065  Score=46.62  Aligned_cols=72  Identities=24%  Similarity=0.334  Sum_probs=50.3

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +++..+.+.|.++..  +| .+.+.++++++++    +. ++.                              .+.++.+
T Consensus        20 aia~~la~~Ga~V~~--~~-r~~~~l~~~~~~~----~~-~~~------------------------------~~~~Dvt   61 (256)
T d1k2wa_          20 AFAEAYVREGARVAI--AD-INLEAARATAAEI----GP-AAC------------------------------AIALDVT   61 (256)
T ss_dssp             HHHHHHHHTTEEEEE--EE-SCHHHHHHHHHHH----CT-TEE------------------------------EEECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHh----CC-ceE------------------------------EEEeeCC
Confidence            356677777766544  45 3566777666654    11 110                              1334667


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++.++.+.+.||+||+||||||...
T Consensus        62 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~~   91 (256)
T d1k2wa_          62 DQASIDRCVAELLDRWGSIDILVNNAALFD   91 (256)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCccEEEeeccccc
Confidence            788899999999999999999999999754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=93.75  E-value=0.056  Score=46.69  Aligned_cols=35  Identities=14%  Similarity=0.284  Sum_probs=30.6

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .++.++..++++.++.+.+.||+||+||||||...
T Consensus        55 ~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~   89 (242)
T d1ulsa_          55 VMDVADPASVERGFAEALAHLGRLDGVVHYAGITR   89 (242)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred             EEecCCHHHHHHHHHHHHHhcCCceEEEECCcccc
Confidence            35667788899999999999999999999999653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.67  E-value=0.13  Score=39.13  Aligned_cols=38  Identities=18%  Similarity=0.291  Sum_probs=33.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      +|.++|.|| |-+|..+|..|+++|.+|.++.|.+.-+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l~   67 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLMS   67 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccccc
Confidence            678888887 78999999999999999999999887654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=93.58  E-value=0.062  Score=46.51  Aligned_cols=34  Identities=32%  Similarity=0.406  Sum_probs=29.9

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      .++.++..+.++.++.+.+.||+||+||||||..
T Consensus        58 ~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~   91 (247)
T d2ew8a1          58 KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY   91 (247)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             EeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            3456778889999999999999999999999974

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=93.55  E-value=0.12  Score=44.55  Aligned_cols=72  Identities=21%  Similarity=0.303  Sum_probs=50.1

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+++..+++.+++..+   .                                ..+.++.+
T Consensus        19 a~a~~l~~~G~~Vv~--~~-r~~~~l~~~~~~~~~~---~--------------------------------~~~~~Dv~   60 (243)
T d1q7ba_          19 AIAETLAARGAKVIG--TA-TSENGAQAISDYLGAN---G--------------------------------KGLMLNVT   60 (243)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SSHHHHHHHHHHHGGG---E--------------------------------EEEECCTT
T ss_pred             HHHHHHHHcCCEEEE--Ee-CCHHHHHHHHHHhCCC---C--------------------------------cEEEEEec
Confidence            356667777877643  45 4566777666655221   1                                01234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..+.++.++.+.+.||+||+||||||...
T Consensus        61 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~~   90 (243)
T d1q7ba_          61 DPASIESVLEKIRAEFGEVDILVNNAGITR   90 (243)
T ss_dssp             CHHHHHHHHHHHHHHTCSCSEEEECCCCCC
T ss_pred             CHHHhhhhhhhhhcccCCcceehhhhhhcc
Confidence            778889999999999999999999999653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.54  E-value=0.087  Score=41.75  Aligned_cols=63  Identities=16%  Similarity=0.211  Sum_probs=45.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++|.|. +-+|+.+++.|.++|.+|++++.++++.       ....++.  ....+.++..|.++++.++++
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~-------~~~~~~~--~~~~~~vi~Gd~~d~~~L~~a   67 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDD-------IKQLEQR--LGDNADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHH-------HHHHHHH--HCTTCEEEESCTTSHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhH-------HHHHHHh--hcCCcEEEEccCcchHHHHHh
Confidence            4777887 6899999999999999999998877531       1122222  234577788999999876553

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.45  E-value=0.15  Score=44.21  Aligned_cols=75  Identities=23%  Similarity=0.230  Sum_probs=52.7

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +++..+.+.|.++..  +| .+++.++++.+++.+..+++..+                                .++.+
T Consensus        23 aiA~~la~~Ga~V~~--~~-r~~~~l~~~~~~~~~~~~~~~~~--------------------------------~~Dv~   67 (259)
T d1xq1a_          23 AIVEEFAGFGAVIHT--CA-RNEYELNECLSKWQKKGFQVTGS--------------------------------VCDAS   67 (259)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHHHTTCCEEEE--------------------------------ECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHHHhcCCceEEE--------------------------------eccCC
Confidence            356667777876543  45 57788888888887654443222                                23455


Q ss_pred             chhhHHHHHHHHHhhc-CCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKF-GGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~-g~id~li~~ag~~~  164 (406)
                      +..+.++.++.+.+.| |++|++|||||...
T Consensus        68 ~~~~v~~~~~~~~~~~~g~idilvnnAG~~~   98 (259)
T d1xq1a_          68 LRPEREKLMQTVSSMFGGKLDILINNLGAIR   98 (259)
T ss_dssp             SHHHHHHHHHHHHHHHTTCCSEEEEECCC--
T ss_pred             CHHHHHHHHHHHHHHhCCCcccccccccccC
Confidence            6677889999999998 79999999999653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.22  Score=37.30  Aligned_cols=70  Identities=14%  Similarity=0.309  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      .+.++.|.|| |-+|+-++.+..+.|++|++.+.+++.-..               ..--.++..|..|.+.+.+++...
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~---------------~va~~~i~~~~~d~~~l~~~~~~~   73 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM---------------HVAHRSHVINMLDGDALRRVVELE   73 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG---------------GGSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh---------------hcCCeEEECCCCCHHHHHHHHHhh
Confidence            3456889986 679999999999999999999988764111               111245678999999998887754


Q ss_pred             HHhcCCccEEE
Q psy6113          88 VDKFGGIDILV   98 (406)
Q Consensus        88 ~~~~g~iD~li   98 (406)
                           .+|++.
T Consensus        74 -----~~DviT   79 (111)
T d1kjqa2          74 -----KPHYIV   79 (111)
T ss_dssp             -----CCSEEE
T ss_pred             -----CCceEE
Confidence                 456653

>d2ozga1 d.106.1.4 (A:291-395) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: EF1021 C-terminal domain-like
domain: Putative acetyltransferase Ava4977
species: Anabaena variabilis [TaxId: 1172]

Probab=93.33  E-value=0.056  Score=40.30  Aligned_cols=64  Identities=19%  Similarity=0.423  Sum_probs=51.5

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHH
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMG  400 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~  400 (406)
                      .|.|.+...+|.+.+.++   +++|  ++|+-.+|-.|..|-.+|..+...|+|+  |+-...-.|..+|.
T Consensus        32 ~G~~~l~~~~G~~~v~~~---~~~d--~~l~I~~Ls~l~~G~~~~~~l~~~G~i~--~~~~~l~~l~~~f~   95 (105)
T d2ozga1          32 QGKFILSVANGKSEVTKG---GKGE--LQLDIKGLASLYTSLFTPRQLQLTGKLQ--ATETALLKATQIFA   95 (105)
T ss_dssp             SEEEEEEEETTEEEEEEC---SCCC--EEEEHHHHHHHHHTSSCHHHHHHTTSEE--ECHHHHHHHHHHHC
T ss_pred             CceEEEEEeCCeEEEeEC---CCCc--eEEcHHHHHHHHhCCCCHHHHHHcCCcc--cCHHHHHHHHHhcC
Confidence            589999999988877653   2445  6778889999999999999999999975  56566667777774

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=93.31  E-value=0.21  Score=39.80  Aligned_cols=76  Identities=12%  Similarity=0.156  Sum_probs=48.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcC--------------CeeeeeeecCCCh
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAG--------------GNCLPCIVDIRDE   77 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g--------------~~~~~~~~Dl~~~   77 (406)
                      +.|.|. |-+|.++|+.|.+.|++|++.+|+.+..           +...+.+              ..+.++   ....
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~-----------~~a~~~~~~~~~~~~~~~~~~~DiIil---avp~   67 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTC-----------EKAVERQLVDEAGQDLSLLQTAKIIFL---CTPI   67 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH-----------HHHHHTTSCSEEESCGGGGTTCSEEEE---CSCH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHH-----------HHHHHhhccceeeeecccccccccccc---cCcH
Confidence            445555 8999999999999999999999986531           1222221              112221   1235


Q ss_pred             HHHHHHHHHHHHhcCCccEEEeccc
Q psy6113          78 HAVQSAVNAAVDKFGGIDILVNNAS  102 (406)
Q Consensus        78 ~~v~~~~~~i~~~~g~iD~linnAG  102 (406)
                      +.++++++++.....+=.++++.++
T Consensus        68 ~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          68 QLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhhhhhhhhcccccceeeccc
Confidence            6777888887665555455555544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=93.31  E-value=0.099  Score=45.68  Aligned_cols=73  Identities=18%  Similarity=0.239  Sum_probs=51.2

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+.+..+++.+++.. .+++.                                .+.++.+
T Consensus        21 aia~~la~~Ga~V~i--~~-r~~~~~~~~~~~l~~-~~~~~--------------------------------~~~~Dv~   64 (268)
T d2bgka1          21 TTAKLFVRYGAKVVI--AD-IADDHGQKVCNNIGS-PDVIS--------------------------------FVHCDVT   64 (268)
T ss_dssp             HHHHHHHHTTCEEEE--EE-SCHHHHHHHHHHHCC-TTTEE--------------------------------EEECCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHhcC-CCceE--------------------------------EEEccCC
Confidence            356677777877654  45 366777777776532 11111                                1234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..++++.++.+.+.||++|++|||||..
T Consensus        65 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~   93 (268)
T d2bgka1          65 KDEDVRNLVDTTIAKHGKLDIMFGNVGVL   93 (268)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCcceeccccccc
Confidence            77889999999999999999999999964

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.30  E-value=0.46  Score=37.87  Aligned_cols=41  Identities=22%  Similarity=0.352  Sum_probs=32.6

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      ...++...+.|.|+ |.+|..+|..|+.+|.  .+++.+++.+.
T Consensus        14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            34455556777786 9999999999999985  79999987654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.28  E-value=0.18  Score=37.80  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=32.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      |.++|.|| |-+|..+|..|++.|.+|.++.|.+.-+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~il~   59 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEILS   59 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecceecc
Confidence            67888887 78999999999999999999998876543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.23  E-value=0.16  Score=38.55  Aligned_cols=37  Identities=14%  Similarity=0.168  Sum_probs=32.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      |.++|.|| |-||..+|..|++.|++|.++.|++.-+.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~l~   60 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQIGA   60 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccccch
Confidence            67788887 78999999999999999999998876544

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=93.19  E-value=0.17  Score=43.73  Aligned_cols=74  Identities=18%  Similarity=0.184  Sum_probs=50.7

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++...  |. +.+..+++.+++.. .+++.                                .+.++.+
T Consensus        21 aia~~la~~Ga~V~~~--~r-~~~~~~~~~~~~~~-~~~~~--------------------------------~~~~Dv~   64 (251)
T d1zk4a1          21 AIATKFVEEGAKVMIT--GR-HSDVGEKAAKSVGT-PDQIQ--------------------------------FFQHDSS   64 (251)
T ss_dssp             HHHHHHHHTTCEEEEE--ES-CHHHHHHHHHHHCC-TTTEE--------------------------------EEECCTT
T ss_pred             HHHHHHHHCCCEEEEE--EC-CHHHHHHHHHHhCC-CCcEE--------------------------------EEEccCC
Confidence            3566777778776544  53 56666666665421 11111                                1334667


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..+.++.++.+.+.||+||+||||||...
T Consensus        65 ~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~   94 (251)
T d1zk4a1          65 DEDGWTKLFDATEKAFGPVSTLVNNAGIAV   94 (251)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCceEEEecccccc
Confidence            788899999999999999999999999764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.15  E-value=0.2  Score=43.57  Aligned_cols=76  Identities=18%  Similarity=0.212  Sum_probs=56.4

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +++..+.+.|.++  +-+|.++.+..+++.+++.+..+.+..+                                .++..
T Consensus        33 aia~~la~~Ga~V--vi~~~~~~~~~~~~~~~~~~~g~~~~~~--------------------------------~~D~~   78 (272)
T d1g0oa_          33 EMAMELGRRGCKV--IVNYANSTESAEEVVAAIKKNGSDAACV--------------------------------KANVG   78 (272)
T ss_dssp             HHHHHHHHTTCEE--EEEESSCHHHHHHHHHHHHHTTCCEEEE--------------------------------ECCTT
T ss_pred             HHHHHHHHcCCEE--EEEeCCchHHHHHHHHHHHhhCCceeeE--------------------------------eCCCC
Confidence            3566777777665  4567888888888888887654443222                                23445


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..+.+..++.+.+.||++|++|||+|...
T Consensus        79 ~~~~v~~~~~~~~~~~g~idilV~nag~~~  108 (272)
T d1g0oa_          79 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVS  108 (272)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCccccccccch
Confidence            677889999999999999999999999653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.15  E-value=0.13  Score=39.13  Aligned_cols=36  Identities=22%  Similarity=0.178  Sum_probs=31.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +|.++|.|| |-+|..+|..|++.|.+|.++.|.+.-
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~l   67 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAMF   67 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccccc
Confidence            467888887 789999999999999999999887653

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=93.11  E-value=0.38  Score=37.75  Aligned_cols=35  Identities=23%  Similarity=0.274  Sum_probs=29.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      |.+.|+|+ |.+|.++|..|+.+|.  ++++.++++++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            56667795 8999999999999984  79999987654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.08  E-value=0.18  Score=37.94  Aligned_cols=37  Identities=22%  Similarity=0.199  Sum_probs=31.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      |.++|.|| |-+|..+|..|++.|.+|.++.|.+..+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~l~   58 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAPLP   58 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecchhhh
Confidence            55677776 78999999999999999999999876543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.06  E-value=0.064  Score=44.99  Aligned_cols=40  Identities=35%  Similarity=0.629  Sum_probs=34.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ..+|+||+++|-| .|.+|..+|+.|.+.|++|++.+.+.+
T Consensus        22 ~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~   61 (201)
T d1c1da1          22 LGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTE   61 (201)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHH
Confidence            3579999999998 577999999999999999999887643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.92  E-value=0.18  Score=38.00  Aligned_cols=39  Identities=21%  Similarity=0.089  Sum_probs=32.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK   48 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~   48 (406)
                      .|.++|.|| |-+|..+|..|++.|.+|.++.|...-+..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~il~~   60 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRILRK   60 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSSCTT
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcccccc
Confidence            467888887 789999999999999999999998765443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.92  E-value=0.13  Score=44.25  Aligned_cols=34  Identities=38%  Similarity=0.662  Sum_probs=29.9

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ++.++..++++.++.+.+.||++|+||||||...
T Consensus        59 ~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~   92 (244)
T d1nffa_          59 LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN   92 (244)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             eecCCHHHHHHHHHHHHHHhCCCeEEEECCcccC
Confidence            4566788899999999999999999999999654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=92.90  E-value=0.11  Score=45.00  Aligned_cols=35  Identities=31%  Similarity=0.375  Sum_probs=30.4

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .++.++..+.+++++.+.+.||+||+||||||...
T Consensus        57 ~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~   91 (254)
T d1hdca_          57 HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIST   91 (254)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             EcccCCHHHHHHHHHHHHHHcCCccEEEecCcccc
Confidence            34567788899999999999999999999999754

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.81  E-value=1.2  Score=34.65  Aligned_cols=32  Identities=25%  Similarity=0.422  Sum_probs=26.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-C--CeEEEEecC
Q psy6113          11 TIFITGASRGIGKAIALKAAKD-G--ANIVIAAKT   42 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~-G--a~Vvl~~r~   42 (406)
                      .+.|+|++|.+|.++|..|+.+ +  ..+++.+..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~   36 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSS
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccc
Confidence            3679999999999999988743 4  589999864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.77  E-value=0.14  Score=41.93  Aligned_cols=41  Identities=22%  Similarity=0.280  Sum_probs=34.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      .-+.|.++|.|| |--|++.|..|+++|++|++..+..+...
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~GG   80 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEIGG   80 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSSCT
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCccCc
Confidence            356789999998 56799999999999999999999876543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.59  E-value=0.075  Score=42.39  Aligned_cols=35  Identities=17%  Similarity=0.266  Sum_probs=31.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH   46 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~   46 (406)
                      .+.|.|+ |.+|..++..|++.|++|.+.+|+.+..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            3677888 9999999999999999999999988753

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=92.59  E-value=0.85  Score=35.46  Aligned_cols=32  Identities=19%  Similarity=0.297  Sum_probs=28.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEecC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAKT   42 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~   42 (406)
                      .+.|+||+|.+|.++|..++.+|.  .+++.+.+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            467899999999999999999985  68888864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.53  E-value=0.059  Score=46.76  Aligned_cols=29  Identities=24%  Similarity=0.377  Sum_probs=24.6

Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..+.+++++.+.+.||+||+||||||..
T Consensus        54 ~~~~~~~~~~~~~~~~G~iDiLVnNAg~~   82 (252)
T d1zmta1          54 SEQEPAELIEAVTSAYGQVDVLVSNDIFA   82 (252)
T ss_dssp             CCCSHHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcCC
Confidence            34457788999999999999999999954

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.53  E-value=0.24  Score=42.73  Aligned_cols=33  Identities=27%  Similarity=0.502  Sum_probs=29.4

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      ++.++..++++.++.+.+.||+||+||||||..
T Consensus        58 ~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~   90 (250)
T d1ydea1          58 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHH   90 (250)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             ccCCCHHHHHHHHHHHHHhcCCCCEEEeccccc
Confidence            456778889999999999999999999999954

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=92.53  E-value=0.27  Score=42.39  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=53.9

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++.  .++-++.+..+++.+++.+..+.+..                                +.++.+
T Consensus        21 aia~~la~~G~~Vv--i~~~~~~~~~~~~~~~~~~~g~~~~~--------------------------------~~~D~~   66 (259)
T d1ja9a_          21 GIAIELGRRGASVV--VNYGSSSKAAEEVVAELKKLGAQGVA--------------------------------IQADIS   66 (259)
T ss_dssp             HHHHHHHHTTCEEE--EEESSCHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHcCCEEE--EEcCCChHHHHHHHHHHHHcCCCceE--------------------------------ecCCCC
Confidence            35667777777663  34567788888888877654332211                                233455


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~  163 (406)
                      +..+..+.++.+.+.||+||++|||||..
T Consensus        67 ~~~~v~~~~~~~~~~~g~idilinnag~~   95 (259)
T d1ja9a_          67 KPSEVVALFDKAVSHFGGLDFVMSNSGME   95 (259)
T ss_dssp             SHHHHHHHHHHHHHHHSCEEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEeccccc
Confidence            67788899999999999999999999965

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=92.52  E-value=0.13  Score=44.63  Aligned_cols=72  Identities=19%  Similarity=0.179  Sum_probs=49.3

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++..  +| .+++.++++.+++..   +  .+                              .+.++..
T Consensus        21 aia~~la~~Ga~V~~--~~-~~~~~~~~~~~~~~~---~--~~------------------------------~~~~Dv~   62 (253)
T d1hxha_          21 EVVKLLLGEGAKVAF--SD-INEAAGQQLAAELGE---R--SM------------------------------FVRHDVS   62 (253)
T ss_dssp             HHHHHHHHTTCEEEE--EC-SCHHHHHHHHHHHCT---T--EE------------------------------EECCCTT
T ss_pred             HHHHHHHHCCCEEEE--EE-CCHHHHHHHHHHhCC---C--eE------------------------------EEEeecC
Confidence            356677777877544  45 366676666665411   1  11                              1123456


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..+.++.++.+.+.||++|+||||||...
T Consensus        63 ~~~~~~~~~~~~~~~~g~iDilVnnAG~~~   92 (253)
T d1hxha_          63 SEADWTLVMAAVQRRLGTLNVLVNNAGILL   92 (253)
T ss_dssp             CHHHHHHHHHHHHHHHCSCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEecccccC
Confidence            777889999999999999999999999754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.41  E-value=0.2  Score=38.13  Aligned_cols=38  Identities=16%  Similarity=0.050  Sum_probs=32.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK   48 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~   48 (406)
                      |.++|.|| |-||..+|..|++.|.+|.++.|...-+..
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~l~~   60 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKVLRS   60 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccccccc
Confidence            67888888 569999999999999999999998765543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.35  E-value=0.29  Score=36.72  Aligned_cols=41  Identities=15%  Similarity=0.132  Sum_probs=34.9

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      ...+|.++|.|| |-+|..+|..|++.|.+|.++.|.+..+.
T Consensus        19 ~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~l~   59 (121)
T d1mo9a2          19 YEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPLKL   59 (121)
T ss_dssp             SCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred             hCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchhhc
Confidence            345788998887 78999999999999999999999876544

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.32  E-value=0.018  Score=47.95  Aligned_cols=36  Identities=22%  Similarity=0.275  Sum_probs=31.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPH   46 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~   46 (406)
                      |.+.|.|+ |=+|..+|..++.+|++|++.+++.+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l   40 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGI   40 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            45778888 7799999999999999999999987653

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.31  E-value=0.45  Score=37.59  Aligned_cols=24  Identities=25%  Similarity=0.418  Sum_probs=21.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA   34 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga   34 (406)
                      .+.|+||+|.+|..++..|+..+.
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l   29 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEM   29 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhccc
Confidence            689999999999999999998763

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=92.14  E-value=0.19  Score=43.49  Aligned_cols=76  Identities=17%  Similarity=0.169  Sum_probs=50.6

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++...  |.. .+...+..+++.+.++. ++.                              .+.++.+
T Consensus        24 aia~~la~~Ga~V~i~--~r~-~~~~~~~~~~~~~~~g~-~~~------------------------------~~~~Dv~   69 (260)
T d1h5qa_          24 AFTRAVAAAGANVAVI--YRS-AADAVEVTEKVGKEFGV-KTK------------------------------AYQCDVS   69 (260)
T ss_dssp             HHHHHHHHTTEEEEEE--ESS-CTTHHHHHHHHHHHHTC-CEE------------------------------EEECCTT
T ss_pred             HHHHHHHHCCCEEEEE--ECC-HHHHHHHHHHHHHHhCC-ceE------------------------------EEEccCC
Confidence            3566677777765554  433 33445556666555442 111                              1234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +..++++.++.+.+.||++|+||||||...
T Consensus        70 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~~   99 (260)
T d1h5qa_          70 NTDIVTKTIQQIDADLGPISGLIANAGVSV   99 (260)
T ss_dssp             CHHHHHHHHHHHHHHSCSEEEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCcEecccccccc
Confidence            778899999999999999999999999753

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=92.05  E-value=0.64  Score=37.00  Aligned_cols=38  Identities=13%  Similarity=0.233  Sum_probs=31.4

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      ++.+.+.|.|+ |.+|.++|..|+.+|.  ++++.+++++.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~   57 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDK   57 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence            44567777796 8899999999999995  79999987654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=91.97  E-value=0.04  Score=43.54  Aligned_cols=35  Identities=26%  Similarity=0.171  Sum_probs=28.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      |.+.|.|+ |.+|.++|..|+.++. ++++.+.+++.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            34555686 9999999999999884 89999987764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.92  E-value=0.022  Score=46.08  Aligned_cols=33  Identities=18%  Similarity=0.192  Sum_probs=27.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +-|.| .|-+|.++|++|+++|++|.+.+|+.++
T Consensus         4 Ig~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~   36 (162)
T d3cuma2           4 IAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSA   36 (162)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             EEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhh
Confidence            44444 5889999999999999999999998654

>d2i00a1 d.106.1.4 (A:301-406) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: SCP-like
superfamily: SCP-like
family: EF1021 C-terminal domain-like
domain: Putative acetyltransferase EF2353
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.88  E-value=0.17  Score=37.62  Aligned_cols=66  Identities=8%  Similarity=0.164  Sum_probs=50.5

Q ss_pred             CcceEEeccCCCcccccCCCCCCCceEEEeeHHhHHHHHcCCCCchhhhhccCceeecCHHHHhhHHHHHH
Q psy6113         330 EGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMG  400 (406)
Q Consensus       330 ~g~w~~dlk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gklk~~g~~~~a~~~~~~~~  400 (406)
                      .|.|.+...+|...... .  ...+..++|+-.+|-.|..|-.+|..+...|+|+  ||-.....|+.+|.
T Consensus        31 ~G~~~l~~~~g~~~~~~-~--~~~~~~v~l~I~~Ls~l~~G~~~~~~L~~~g~i~--~~~~~l~~L~~~f~   96 (106)
T d2i00a1          31 NGIFGLIWDENDQVTIT-D--EPLGTAVHLDIQTLTCLVMNYRRPSYLHRIERID--TDKETLNSLERIFP   96 (106)
T ss_dssp             SEEEEEEECTTCCEEEE-S--SCCSEEEEEEHHHHHHHHHTSSCHHHHHHTTSCB--CCHHHHHHHHHHSC
T ss_pred             CcEEEEEEeCCcceEee-c--CCCCccEEEeHHHHHHHHhCCCCHHHHHHcCCcc--CCHHHHHHHHHHcC
Confidence            58999999887543222 1  2335678888999999999999999999999996  56566666777664

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.79  E-value=0.64  Score=33.56  Aligned_cols=72  Identities=18%  Similarity=0.214  Sum_probs=47.5

Q ss_pred             CCcEEEEecCCchHH-HHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHH
Q psy6113           8 SGLTIFITGASRGIG-KAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNA   86 (406)
Q Consensus         8 ~gk~alVTGas~GIG-~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~   86 (406)
                      +.|.+.+.|- +|+| .++|+.|.++|+.|...|+...          ...+.+.+.|..+..- -+   ++        
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~----------~~~~~L~~~Gi~v~~g-~~---~~--------   63 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADG----------VVTQRLAQAGAKIYIG-HA---EE--------   63 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCS----------HHHHHHHHTTCEEEES-CC---GG--------
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCC----------hhhhHHHHCCCeEEEC-Cc---cc--------
Confidence            3566777776 5566 5579999999999999998754          2455666667654321 11   11        


Q ss_pred             HHHhcCCccEEEecccccc
Q psy6113          87 AVDKFGGIDILVNNASAIS  105 (406)
Q Consensus        87 i~~~~g~iD~linnAG~~~  105 (406)
                         .....|++|...++..
T Consensus        64 ---~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1          64 ---HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             ---GGTTCSEEEECTTSCT
T ss_pred             ---cCCCCCEEEECCCcCC
Confidence               1235799999988753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.76  E-value=0.29  Score=36.55  Aligned_cols=39  Identities=18%  Similarity=0.285  Sum_probs=32.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK   48 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~   48 (406)
                      .|.++|.|| |-+|..+|..|++.|++|.++.|.+.-+..
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~il~~   59 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERILPT   59 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSSSTT
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecccccc
Confidence            366777776 789999999999999999999888765543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=91.65  E-value=0.1  Score=42.31  Aligned_cols=35  Identities=23%  Similarity=0.180  Sum_probs=31.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .|++.|.|+ |.+|.++|..|+++|++|.+.+|+++
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~   35 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQ   35 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            378888998 88999999999999999999999765

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=91.46  E-value=0.06  Score=46.66  Aligned_cols=35  Identities=31%  Similarity=0.349  Sum_probs=30.6

Q ss_pred             EEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .++.++..++++.++.+.+.||+||+||||||...
T Consensus        54 ~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~   88 (248)
T d2d1ya1          54 QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAA   88 (248)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             EEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCC
Confidence            34667788899999999999999999999999764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.30  E-value=0.24  Score=39.05  Aligned_cols=38  Identities=13%  Similarity=0.177  Sum_probs=29.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+++++|-.+++-||.++|..|+++|++|.++.+...-
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            33444444566889999999999999999999987643

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.17  E-value=1  Score=35.43  Aligned_cols=37  Identities=14%  Similarity=0.145  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      +.+.+.|.|+ |.+|..+|..|+..+. ++++.+.++++
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            3455666787 8999999999999884 89999988764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.95  E-value=0.38  Score=36.16  Aligned_cols=39  Identities=21%  Similarity=0.179  Sum_probs=32.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPK   48 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~   48 (406)
                      .+.++|.|| |-||..+|..|++.|.+|.++.|...-+..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ll~~   60 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKFLPA   60 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecccCCc
Confidence            366888887 789999999999999999999988765443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.93  E-value=1  Score=34.79  Aligned_cols=33  Identities=21%  Similarity=0.286  Sum_probs=27.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      +.|.|+ |.+|.++|..++.++.  ++++.++++++
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~   37 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKR   37 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeccccc
Confidence            455686 8899999999999884  79999988654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=90.92  E-value=0.55  Score=39.97  Aligned_cols=37  Identities=24%  Similarity=0.363  Sum_probs=32.8

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      +|++++|+|.|+ ||+|..++..|++.|. ++.++|.+.
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            578899999996 8899999999999998 788987654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.91  E-value=0.16  Score=41.13  Aligned_cols=40  Identities=13%  Similarity=0.175  Sum_probs=36.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.||.++|.|-|.=+|+-++..|+++|++|.++.....
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~   74 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA   74 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence            4689999999999999999999999999999999876554

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.83  E-value=0.3  Score=36.99  Aligned_cols=32  Identities=16%  Similarity=0.146  Sum_probs=27.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45777777 789999999999999999999875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=90.81  E-value=0.48  Score=38.12  Aligned_cols=29  Identities=21%  Similarity=0.314  Sum_probs=26.0

Q ss_pred             CCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113          17 ASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus        17 as~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      |.|-+|.++|++|++.|++|.+.+|++++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~   36 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSK   36 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            45889999999999999999999998764

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=90.73  E-value=0.71  Score=35.76  Aligned_cols=33  Identities=21%  Similarity=0.342  Sum_probs=28.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~   45 (406)
                      +.|+|+ |.+|.+++..|+..|  .++++.++++++
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~   37 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGI   37 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEecccccc
Confidence            556686 899999999999998  489999998875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.64  E-value=0.57  Score=41.26  Aligned_cols=77  Identities=22%  Similarity=0.340  Sum_probs=54.5

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCC---ccEEEecccccccCCCCCCChhhhhhhhhhccccceEE
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGG---IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV  131 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~---iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (406)
                      +++..+.+.|.++...  | .+.+.+++..+++.+.+..   .+++                              .+.+
T Consensus        27 aia~~la~~Ga~Vvi~--~-r~~~~l~~~~~el~~~~~~~~~~~~~------------------------------~~~~   73 (297)
T d1yxma1          27 AIVKELLELGSNVVIA--S-RKLERLKSAADELQANLPPTKQARVI------------------------------PIQC   73 (297)
T ss_dssp             HHHHHHHHTTCEEEEE--E-SCHHHHHHHHHHHHHTSCTTCCCCEE------------------------------EEEC
T ss_pred             HHHHHHHHCCCEEEEE--E-CCHHHHHHHHHHHHhhhccccCceEE------------------------------EEec
Confidence            3566777778776543  4 3677788888888765321   1111                              2345


Q ss_pred             eccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         132 KASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.++..++++.++.+.+.||+||+||||||...
T Consensus        74 Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~  106 (297)
T d1yxma1          74 NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF  106 (297)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             cCCCHHHHHHHHHHHHHHhCCeEEEEeeccccc
Confidence            667788899999999999999999999999653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.58  E-value=0.14  Score=41.21  Aligned_cols=37  Identities=22%  Similarity=0.336  Sum_probs=33.7

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      .|.||+++|.|= +-||+.+|+.|...|++|++.+.++
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeeccc
Confidence            478999999987 5799999999999999999998875

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.55  E-value=0.15  Score=41.44  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=34.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKT   42 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~   42 (406)
                      +++||.++|.|-|.=+|+-+|..|+++|+.|..+..+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            7999999999999999999999999999999987654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.48  E-value=0.54  Score=36.02  Aligned_cols=39  Identities=18%  Similarity=0.237  Sum_probs=34.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      .+|.++|.|| |-+|..+|..|++.|.+|.++.+.+..+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~l~   72 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARVLE   72 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccccc
Confidence            4678888887 78999999999999999999999877654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=90.22  E-value=0.2  Score=40.38  Aligned_cols=40  Identities=18%  Similarity=0.331  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.||.++|.|-|.=+|+-++..|.++|++|.++.....
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            3689999999999999999999999999999998865443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.16  E-value=0.35  Score=36.61  Aligned_cols=38  Identities=18%  Similarity=0.258  Sum_probs=33.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      .|.++|.|| +-||..+|..|.+.|.+|.++.|++..+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l~   62 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIVP   62 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccCc
Confidence            367888887 78999999999999999999999887654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=90.02  E-value=0.23  Score=41.22  Aligned_cols=72  Identities=19%  Similarity=0.288  Sum_probs=51.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .++.||+++=.|+++|+   ++..++..|+ +|+.++.+++           +.+..+..-.++.++.+|+.+.      
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~-----------a~~~ar~N~~~~~~~~~D~~~l------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPD-----------AIETAKRNCGGVNFMVADVSEI------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHH-----------HHHHHHHHCTTSEEEECCGGGC------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHH-----------HHHHHHHccccccEEEEehhhc------
Confidence            57899999999999883   3455777886 6999987754           2333333445677888888543      


Q ss_pred             HHHHHHhcCCccEEEecccc
Q psy6113          84 VNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~  103 (406)
                             -++.|++|.|.-.
T Consensus       105 -------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -------SGKYDTWIMNPPF  117 (197)
T ss_dssp             -------CCCEEEEEECCCC
T ss_pred             -------CCcceEEEeCccc
Confidence                   2689999988553

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.99  E-value=0.15  Score=43.80  Aligned_cols=36  Identities=22%  Similarity=0.268  Sum_probs=30.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +|.|+|.||+ -=|++.|.+|+++|++|+++.++...
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~~~   36 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEGKA   36 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence            5889999885 45899999999999999999876543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=89.99  E-value=2  Score=37.09  Aligned_cols=76  Identities=14%  Similarity=0.202  Sum_probs=53.4

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      .++..+.+.|.++...  | .+.+..++.++++.+.++.--..                               +.++.+
T Consensus        40 aiA~~la~~Ga~Vii~--~-r~~~~l~~~~~~l~~~~g~~~~~-------------------------------~~~D~~   85 (294)
T d1w6ua_          40 GMTTLLSSLGAQCVIA--S-RKMDVLKATAEQISSQTGNKVHA-------------------------------IQCDVR   85 (294)
T ss_dssp             HHHHHHHHTTCEEEEE--E-SCHHHHHHHHHHHHHHHSSCEEE-------------------------------EECCTT
T ss_pred             HHHHHHHHcCCEEEEE--E-CCHHHHHHHHHHHHHhcCCceEE-------------------------------EEeccc
Confidence            3567777888776554  4 35677777888877665431111                               223445


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +...++..+....+.++++|++|||||...
T Consensus        86 ~~~~v~~~~~~~~~~~g~iDilvnnAg~~~  115 (294)
T d1w6ua_          86 DPDMVQNTVSELIKVAGHPNIVINNAAGNF  115 (294)
T ss_dssp             CHHHHHHHHHHHHHHTCSCSEEEECCCCCC
T ss_pred             ChHHHHHHhhhhhhhccccchhhhhhhhcc
Confidence            666778889999999999999999999653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.98  E-value=3.3  Score=32.12  Aligned_cols=34  Identities=18%  Similarity=0.263  Sum_probs=27.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      .+.|.|+ |.+|.++|..|+.++. ++++.++++++
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            4566685 8999999998888884 89999998764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=89.91  E-value=0.86  Score=35.44  Aligned_cols=33  Identities=30%  Similarity=0.527  Sum_probs=27.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      +.|.|+ |.+|.++|..|+.+|.  ++++.++++++
T Consensus         4 i~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~   38 (143)
T d1llda1           4 LAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKER   38 (143)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHH
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence            445586 9999999999999985  79999988654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.63  E-value=0.3  Score=39.86  Aligned_cols=40  Identities=20%  Similarity=0.238  Sum_probs=35.4

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ..+.||++.|.|.+ .||+.+++.+..-|++|+..+|....
T Consensus        38 ~~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~~~   77 (181)
T d1qp8a1          38 PLIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTPKE   77 (181)
T ss_dssp             CCCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred             CcccCceEEEeccc-cccccceeeeeccccccccccccccc
Confidence            45899999999985 59999999999999999999987653

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=89.60  E-value=0.91  Score=38.94  Aligned_cols=75  Identities=20%  Similarity=0.325  Sum_probs=52.8

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +.+..+.+.|.++...  | .+++..+++.+++.+.......                                +.++.+
T Consensus        21 aia~~la~~G~~V~i~--~-r~~~~l~~~~~~~~~~~~~~~~--------------------------------~~~D~s   65 (258)
T d1ae1a_          21 AIVEELAGLGARVYTC--S-RNEKELDECLEIWREKGLNVEG--------------------------------SVCDLL   65 (258)
T ss_dssp             HHHHHHHHTTCEEEEE--E-SCHHHHHHHHHHHHHTTCCEEE--------------------------------EECCTT
T ss_pred             HHHHHHHHCCCEEEEE--E-CCHHHHHHHHHHHHhcCCCceE--------------------------------EEeecC
Confidence            3566777788776554  4 3567778887777654333222                                234556


Q ss_pred             chhhHHHHHHHHHhhc-CCcceEeccccccc
Q psy6113         135 QGLEIQSAVNAAVDKF-GGIDILVNNASAIS  164 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~-g~id~li~~ag~~~  164 (406)
                      +..++++.++.+.+.+ |.+|+||||||...
T Consensus        66 ~~~~~~~~~~~~~~~~~g~idilinnag~~~   96 (258)
T d1ae1a_          66 SRTERDKLMQTVAHVFDGKLNILVNNAGVVI   96 (258)
T ss_dssp             CHHHHHHHHHHHHHHTTSCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCcEEEeccccccc
Confidence            6778889999999999 68999999999764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.56  E-value=0.24  Score=41.78  Aligned_cols=34  Identities=26%  Similarity=0.342  Sum_probs=29.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      -|.|+|.|| |=.|+++|.+|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            356888888 6679999999999999999999865

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.12  E-value=0.28  Score=40.75  Aligned_cols=40  Identities=18%  Similarity=0.132  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .++.||++.|.|. |.||+.+|+.|..-|++|+..++....
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   80 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMK   80 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccch
Confidence            4788999999998 779999999999999999999887654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.11  E-value=0.12  Score=44.41  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=31.5

Q ss_pred             eEEeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      +.++.++..++++.++.+.+.||+||+||||||...
T Consensus        50 ~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~   85 (237)
T d1uzma1          50 VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA   85 (237)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC
T ss_pred             EEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccc
Confidence            456777888899999999999999999999999653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.04  E-value=0.24  Score=46.28  Aligned_cols=79  Identities=16%  Similarity=0.174  Sum_probs=51.1

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      |++..++|.|+ ||||-.+++.|+..|. ++.++|.+.=....              .+.++.+-.-|+.... ++.+.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sN--------------L~RQflf~~~diG~~K-a~~a~~   98 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSN--------------LNRQFLFRPKDIGRPK-AEVAAE   98 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGG--------------GGTCTTCCGGGTTSBH-HHHHHH
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhh--------------hcccccCChhHcCcHH-HHHHHH
Confidence            56678999999 7899999999999998 89999876533211              1223334445665443 445556


Q ss_pred             HHHHhcCCccEEEecc
Q psy6113          86 AAVDKFGGIDILVNNA  101 (406)
Q Consensus        86 ~i~~~~g~iD~linnA  101 (406)
                      ++.+....+.+..+..
T Consensus        99 ~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          99 FLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HHHHHSTTCCCEEECS
T ss_pred             HHHhhCCCCceEeeec
Confidence            6655555555554443

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.95  E-value=0.33  Score=40.24  Aligned_cols=76  Identities=20%  Similarity=0.290  Sum_probs=53.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSA   83 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~   83 (406)
                      .+++|++++=-|++.|.   ++..++.+|+ +|+.++.+++.       +..+.+.++..+.+..++..|+.+.      
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~-------~~~a~~N~~~~~~~~~~~~~d~~~~------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEA-------VDVLIENLGEFKGKFKVFIGDVSEF------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHH-------HHHHHHHTGGGTTSEEEEESCGGGC------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHH-------HHHHHHHHHHcCCCceEEECchhhh------
Confidence            57899999999998772   3344567886 79999888653       3334444556677788888886443      


Q ss_pred             HHHHHHhcCCccEEEecccc
Q psy6113          84 VNAAVDKFGGIDILVNNASA  103 (406)
Q Consensus        84 ~~~i~~~~g~iD~linnAG~  103 (406)
                             .+++|++|.|.-.
T Consensus       107 -------~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -------NSRVDIVIMNPPF  119 (201)
T ss_dssp             -------CCCCSEEEECCCC
T ss_pred             -------CCcCcEEEEcCcc
Confidence                   3579999988754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=88.71  E-value=0.28  Score=40.54  Aligned_cols=39  Identities=28%  Similarity=0.406  Sum_probs=35.1

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.||++.|.|. |.||+.+|+.+..-|++|+..++...
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            5689999999987 78999999999999999999988654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.66  E-value=0.34  Score=36.90  Aligned_cols=57  Identities=14%  Similarity=0.094  Sum_probs=41.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQS   82 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~   82 (406)
                      |.++|.|. +.+|+.+++.|  +|.+|++++.+++.           .+.+...+  +.++..|.++++.+++
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~-----------~~~~~~~~--~~~i~Gd~~~~~~L~~   57 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENV-----------RKKVLRSG--ANFVHGDPTRVSDLEK   57 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTH-----------HHHHHHTT--CEEEESCTTSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHH-----------HHHHHhcC--ccccccccCCHHHHHH
Confidence            56888886 77899999999  46678888877653           33344444  5667799999887655

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.56  E-value=0.21  Score=40.50  Aligned_cols=36  Identities=25%  Similarity=0.135  Sum_probs=30.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~   45 (406)
                      +|.|+|.|| |-.|+..|..|+++|+ .|.++.|+...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            677888888 6789999999999998 59899887653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.30  E-value=1.2  Score=34.83  Aligned_cols=23  Identities=17%  Similarity=0.361  Sum_probs=20.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDG   33 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~G   33 (406)
                      .+.|+||+|.+|.+++..|+..+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
Confidence            58899999999999999998765

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.78  E-value=0.83  Score=37.23  Aligned_cols=40  Identities=18%  Similarity=0.140  Sum_probs=34.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .++.++++.|.|- |.||+.+|+.+...|++|+..++....
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKL   79 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccccc
Confidence            4688999999966 889999999999999999999886543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.71  E-value=0.25  Score=42.43  Aligned_cols=31  Identities=29%  Similarity=0.338  Sum_probs=27.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      ++|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            778877 7789999999999999999999864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.50  E-value=0.72  Score=39.17  Aligned_cols=35  Identities=20%  Similarity=0.256  Sum_probs=29.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHH-cCCeEEEEe
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAK-DGANIVIAA   40 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~-~Ga~Vvl~~   40 (406)
                      .+++|++++|-| .|-.|+.+|+.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            478999999887 58899999999985 599988765

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.43  E-value=0.89  Score=34.63  Aligned_cols=73  Identities=15%  Similarity=0.258  Sum_probs=53.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCeEEEE-ecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGANIVIA-AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVD   89 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga~Vvl~-~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~   89 (406)
                      .+.|.|++|-+|+++++.+.++|+.++.. +++...  .+             ....   +..|+|.++...+.++.+.+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~~-------------~~~D---VvIDFS~p~~~~~~l~~~~~   63 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--EL-------------DSPD---VVIDFSSPEALPKTVDLCKK   63 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--EC-------------SCCS---EEEECSCGGGHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--Hh-------------ccCC---EEEEecCHHHHHHHHHHHHh
Confidence            37899999999999999999999987753 443221  00             0112   45699999999999999887


Q ss_pred             hcCCccEEEecccc
Q psy6113          90 KFGGIDILVNNASA  103 (406)
Q Consensus        90 ~~g~iD~linnAG~  103 (406)
                      .  ++-+++-..|.
T Consensus        64 ~--~~p~ViGTTG~   75 (128)
T d1vm6a3          64 Y--RAGLVLGTTAL   75 (128)
T ss_dssp             H--TCEEEECCCSC
T ss_pred             c--CCCEEEEcCCC
Confidence            6  45567766664

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.35  E-value=0.92  Score=38.49  Aligned_cols=22  Identities=41%  Similarity=0.653  Sum_probs=18.7

Q ss_pred             HHHHHHhhcCCcceEecccccc
Q psy6113         142 AVNAAVDKFGGIDILVNNASAI  163 (406)
Q Consensus       142 ~~~~~~~~~g~id~li~~ag~~  163 (406)
                      .++.+++.||+||+||||||..
T Consensus        64 ~v~~~~~~~g~iDilVnnAg~~   85 (242)
T d1cyda_          64 ATEKALGGIGPVDLLVNNAALV   85 (242)
T ss_dssp             HHHHHHTTCCCCSEEEECCCCC
T ss_pred             HHHHHHHHcCCCeEEEECCccc
Confidence            4567788999999999999964

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=87.33  E-value=0.36  Score=39.99  Aligned_cols=39  Identities=13%  Similarity=0.152  Sum_probs=34.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.||++.|.|- |.||+.+|+.|..-|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            3689999999998 78999999999999999999887643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.10  E-value=2.3  Score=30.00  Aligned_cols=68  Identities=16%  Similarity=0.241  Sum_probs=47.3

Q ss_pred             EEEecCCchHHH-HHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHh
Q psy6113          12 IFITGASRGIGK-AIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDK   90 (406)
Q Consensus        12 alVTGas~GIG~-aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~   90 (406)
                      +-+.|- +|+|- ++|+.|.++|+.|...|+...          ...+.+++.|.++.. .-|..+              
T Consensus         4 ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~----------~~t~~L~~~Gi~i~~-gh~~~~--------------   57 (89)
T d1j6ua1           4 IHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET----------ERTAYLRKLGIPIFV-PHSADN--------------   57 (89)
T ss_dssp             EEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC----------HHHHHHHHTTCCEES-SCCTTS--------------
T ss_pred             EEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC----------hhHHHHHHCCCeEEe-eecccc--------------
Confidence            445554 67776 689999999999999998754          345668888866532 223222              


Q ss_pred             cCCccEEEecccccc
Q psy6113          91 FGGIDILVNNASAIS  105 (406)
Q Consensus        91 ~g~iD~linnAG~~~  105 (406)
                      ....|++|...++..
T Consensus        58 i~~~d~vV~SsAI~~   72 (89)
T d1j6ua1          58 WYDPDLVIKTPAVRD   72 (89)
T ss_dssp             CCCCSEEEECTTCCT
T ss_pred             cCCCCEEEEecCcCC
Confidence            246899999999853

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.67  E-value=0.78  Score=34.71  Aligned_cols=38  Identities=13%  Similarity=0.104  Sum_probs=32.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHP   47 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~   47 (406)
                      .|.++|.|| |-||..+|..|.+.|.+|.++.|.+.-+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~il~   63 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGLMQ   63 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccccc
Confidence            467888887 78999999999999999999988876544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=86.17  E-value=0.53  Score=39.93  Aligned_cols=40  Identities=25%  Similarity=0.484  Sum_probs=34.8

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ..+|+||+++|-|- |.+|..+|+.|.+.|++|++.+.+..
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~   73 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKA   73 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHH
Confidence            45799999999887 78999999999999999999876543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.98  E-value=1.8  Score=33.13  Aligned_cols=76  Identities=14%  Similarity=0.245  Sum_probs=51.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCeEEE-EecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHH
Q psy6113          11 TIFITGASRGIGKAIALKAAKD-GANIVI-AAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAV   88 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~-Ga~Vvl-~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~   88 (406)
                      .+.|.|++|-+|+++++...+. ++.++. +++...            .......+..   +-.|+|.++.+.+.++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~------------~~~~~~~~~D---vvIDFS~p~~~~~~~~~~~   65 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP------------LSLLTDGNTE---VVIDFTHPDVVMGNLEFLI   65 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC------------THHHHTTTCS---EEEECCCTTTHHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc------------hhhhccccCC---EEEEcccHHHHHHHHHHHH
Confidence            4789999999999999988775 456553 343321            1112222222   4579999999999999888


Q ss_pred             HhcCCccEEEecccc
Q psy6113          89 DKFGGIDILVNNASA  103 (406)
Q Consensus        89 ~~~g~iD~linnAG~  103 (406)
                      +.  ++-+++-..|.
T Consensus        66 ~~--~~~~ViGTTG~   78 (135)
T d1yl7a1          66 DN--GIHAVVGTTGF   78 (135)
T ss_dssp             HT--TCEEEECCCCC
T ss_pred             hc--CCCEEEecccc
Confidence            75  55667766664

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=85.54  E-value=7.7  Score=31.19  Aligned_cols=67  Identities=6%  Similarity=-0.150  Sum_probs=39.0

Q ss_pred             hhHHHHHHHhhhHHhHhcCCCeEEEeCCCCCCCCCccCCchhhhHhhHHHHHHHHHHHHhhcCCCeEEEEecc
Q psy6113         184 ARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP  256 (406)
Q Consensus       184 ~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~P  256 (406)
                      +...+.++|++.   ......++.+++.......   .+-..-....+++.+|.|+++.|+-...+++..+.+
T Consensus       102 ~~~~l~l~qal~---~~~~~~~l~~vT~~a~~~~---~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~  168 (209)
T d2fr1a2         102 LADTLSLVQAMV---SAELGCPLWTVTESAVATG---PFERVRNAAHGALWGVGRVIALENPAVWGGLVDVPA  168 (209)
T ss_dssp             HHHHHHHHHHHH---HTTCCCCEEEEEESCSCSS---TTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEECT
T ss_pred             HHHHHHHHHHHH---hCCCCCcEEEEEcCCcccC---CCcccCCHhHHhHHHHHHHHHHhCCCceEEEEECCC
Confidence            345556666553   2233456666665432221   122233567899999999999998654455555543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=85.54  E-value=3.4  Score=32.21  Aligned_cols=76  Identities=11%  Similarity=0.091  Sum_probs=48.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC--CeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHHHH
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDG--ANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAA   87 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~G--a~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i   87 (406)
                      |.+.|-|+||-||.....-+.++-  ++|+..+-+..        ++...+++.+...+..+    +.|++..+.+.+.+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N--------~~~L~~q~~~f~pk~v~----i~d~~~~~~l~~~l   69 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN--------VTRMVEQCLEFSPRYAV----MDDEASAKLLKTML   69 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC--------HHHHHHHHHHHCCSEEE----ESSHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc--------HHHHHHHHHHHhhcccc----cccHHHHHHHHHHh
Confidence            578999999999999998888874  57776544332        33455666666655443    35666666665555


Q ss_pred             HHhcCCccEE
Q psy6113          88 VDKFGGIDIL   97 (406)
Q Consensus        88 ~~~~g~iD~l   97 (406)
                      ......+.++
T Consensus        70 ~~~~~~~~~~   79 (151)
T d1q0qa2          70 QQQGSRTEVL   79 (151)
T ss_dssp             HHTTCCCEEE
T ss_pred             hhhccccccc
Confidence            5443344443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.53  E-value=0.52  Score=38.43  Aligned_cols=39  Identities=26%  Similarity=0.295  Sum_probs=34.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.||++.|.|. +.||+++++.+..-|++|+..++...
T Consensus        40 ~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          40 TEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCC
Confidence            3688999999986 88999999999999999999987654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.75  E-value=6.4  Score=30.00  Aligned_cols=33  Identities=15%  Similarity=0.203  Sum_probs=27.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC--eEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA--NIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~   45 (406)
                      +.|.|+ |.+|.++|..|+.+|.  ++++.++++++
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   37 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL   37 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccch
Confidence            456686 9999999999999984  69999987654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=84.73  E-value=0.63  Score=38.01  Aligned_cols=40  Identities=15%  Similarity=0.108  Sum_probs=35.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ..+++++++.|.|. |.||+++++.|..-|.+|+..+|...
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            34689999999997 78999999999999999999998754

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.41  E-value=1.6  Score=36.95  Aligned_cols=23  Identities=39%  Similarity=0.559  Sum_probs=19.1

Q ss_pred             HHHHHHhhcCCcceEeccccccc
Q psy6113         142 AVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       142 ~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      .++.+++.||+||+||||||...
T Consensus        66 ~v~~~~~~~g~iDilVnnAg~~~   88 (244)
T d1pr9a_          66 ATERALGSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             HHHHHHTTCCCCCEEEECCCCCC
T ss_pred             HHHHHHHHhCCceEEEecccccc
Confidence            35667789999999999999753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=84.39  E-value=0.72  Score=38.84  Aligned_cols=36  Identities=19%  Similarity=0.294  Sum_probs=29.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+.|+|.|| |=-|+..|..|+++|.+|+++.|+.+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~   39 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQP   39 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            456888888 455888999999999999999987654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=84.38  E-value=2.3  Score=33.31  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=27.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCC
Q psy6113          11 TIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAE   44 (406)
Q Consensus        11 ~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~   44 (406)
                      .+.|.|. |-||.++|+.|.+.|.  +|+..+|+.+
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~   37 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPE   37 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence            4777775 8999999999999996  6777888764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=84.37  E-value=0.49  Score=37.74  Aligned_cols=37  Identities=27%  Similarity=0.340  Sum_probs=33.4

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCC
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTA   43 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~   43 (406)
                      -+.||+++|.|= +-+|+.+|++|...|++|+++..++
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCc
Confidence            478999999986 6799999999999999999997775

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=84.26  E-value=0.73  Score=37.79  Aligned_cols=40  Identities=28%  Similarity=0.227  Sum_probs=34.9

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      .+++||++.|.|. |.||+.+|+.+...|++|+..++....
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            4678999999988 789999999999999999998876553

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.11  E-value=0.62  Score=36.65  Aligned_cols=36  Identities=11%  Similarity=0.211  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC--eEEEEecCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGA--NIVIAAKTAE   44 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~   44 (406)
                      .||.++|.|| |-.|..+|..|.+.|.  +|+++.+++.
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~~   38 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNTD   38 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCCc
Confidence            4899999999 5669999999999985  7888877654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=83.97  E-value=1.9  Score=36.86  Aligned_cols=75  Identities=20%  Similarity=0.194  Sum_probs=52.5

Q ss_pred             ccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCeeeeeeecCCChHHHHHHHH
Q psy6113           6 KLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         6 ~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ...|+++|=.|+++|+   ++..+++.|++|+.++.++..       ++.+.+..+..+.+..++..|+.+         
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~a-------v~~A~~na~~n~~~~~~~~~d~~~---------  178 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMV-------LPQAEANAKRNGVRPRFLEGSLEA---------  178 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGG-------HHHHHHHHHHTTCCCEEEESCHHH---------
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHH-------HHHHHHHHHHcCCceeEEeccccc---------
Confidence            3578999999999996   334677889999999998875       444555556666666666665421         


Q ss_pred             HHHHhcCCccEEEecc
Q psy6113          86 AAVDKFGGIDILVNNA  101 (406)
Q Consensus        86 ~i~~~~g~iD~linnA  101 (406)
                        ....++.|+++.|.
T Consensus       179 --~~~~~~fD~V~ani  192 (254)
T d2nxca1         179 --ALPFGPFDLLVANL  192 (254)
T ss_dssp             --HGGGCCEEEEEEEC
T ss_pred             --cccccccchhhhcc
Confidence              11246899999873

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.77  E-value=1.4  Score=32.55  Aligned_cols=38  Identities=8%  Similarity=-0.013  Sum_probs=28.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHH---cCCeEEEEecCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAK---DGANIVIAAKTAEPHP   47 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~---~Ga~Vvl~~r~~~~~~   47 (406)
                      .|.++|.|| |-+|..+|..|.+   +|.+|.++.|.+.-+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL~   60 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMILR   60 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSST
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhhc
Confidence            467888888 8899999976655   4567999988776544

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=83.77  E-value=0.42  Score=35.16  Aligned_cols=40  Identities=5%  Similarity=0.127  Sum_probs=33.3

Q ss_pred             CcccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113           4 TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         4 ~~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ..+++||.++|.|++ --|..+|..|++.+.+|++..|+..
T Consensus        27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            457999999999986 5688999999999988887777654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=83.73  E-value=0.52  Score=40.46  Aligned_cols=32  Identities=22%  Similarity=0.419  Sum_probs=27.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~   44 (406)
                      ++|.|| |=.|.++|.+|+++|.+|+++.+...
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            677777 66799999999999999999998654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=83.65  E-value=0.57  Score=40.66  Aligned_cols=37  Identities=22%  Similarity=0.318  Sum_probs=30.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      ..|.|+|.||+ =-|++.|.+|+++|++|+++.++...
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~~~   65 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASERP   65 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            45789999985 45999999999999999999876643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=83.60  E-value=0.7  Score=38.74  Aligned_cols=38  Identities=16%  Similarity=0.203  Sum_probs=32.5

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      -.+|.++|.||+ --|...|..|+++|++|.++.++.+-
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecccc
Confidence            367899999994 55999999999999999999887654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=83.58  E-value=0.37  Score=41.12  Aligned_cols=34  Identities=15%  Similarity=0.268  Sum_probs=29.3

Q ss_pred             EeccchhhHHHHHHHHHhhcCCcceEeccccccc
Q psy6113         131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAIS  164 (406)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  164 (406)
                      ++.++..++++.++.+.+.||++|+||||||...
T Consensus        58 ~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~   91 (241)
T d2a4ka1          58 ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH   91 (241)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTT
T ss_pred             ecCCCHHHHHHHHHHHHHHhCCccEecccccccc
Confidence            4566777889999999999999999999999753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.56  E-value=0.53  Score=40.99  Aligned_cols=31  Identities=29%  Similarity=0.374  Sum_probs=27.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      |+|.|| |-+|.++|.+|+++|. +|+|++|+.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            777887 6899999999999996 699998875

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=83.39  E-value=3.5  Score=33.20  Aligned_cols=48  Identities=21%  Similarity=0.286  Sum_probs=37.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHcCCee
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNC   67 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~g~~~   67 (406)
                      ..-.++|.|| +-.|++-++-...-|++|.+.|.+.++           .+++++.+.+.
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~-----------~~~l~~l~~~~   75 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAAT-----------KEQVESLGGKF   75 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTT-----------HHHHHHTTCEE
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHH-----------HHHHHHhhcce
Confidence            3446788887 567999999999999999999998875           44556666544

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.20  E-value=1.5  Score=38.44  Aligned_cols=75  Identities=17%  Similarity=0.277  Sum_probs=49.7

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCCcccHHHHHHHHHHc--CCeeeeeeecCCChHHHH
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTAEPHPKLPGTIYSAAKEVEDA--GGNCLPCIVDIRDEHAVQ   81 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~--g~~~~~~~~Dl~~~~~v~   81 (406)
                      ..++||+||-.|++.|+   ++..++++|+ +|+.++.++.        ...+.+.....  ..++.++..|+.+...  
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~--------~~~a~~~~~~~~~~~~i~~~~~~~~~l~~--   98 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI--------LYQAMDIIRLNKLEDTITLIKGKIEEVHL--   98 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH--------HHHHHHHHHHTTCTTTEEEEESCTTTSCC--
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH--------HHHHHHHHHHhCCCccceEEEeeHHHhcC--
Confidence            45789999999999886   5777888997 6888877643        12233333333  3467778877766431  


Q ss_pred             HHHHHHHHhcCCccEEEec
Q psy6113          82 SAVNAAVDKFGGIDILVNN  100 (406)
Q Consensus        82 ~~~~~i~~~~g~iD~linn  100 (406)
                              ...+.|+++..
T Consensus        99 --------~~~~~D~Ivse  109 (311)
T d2fyta1          99 --------PVEKVDVIISE  109 (311)
T ss_dssp             --------SCSCEEEEEEC
T ss_pred             --------ccccceEEEEe
Confidence                    12467888764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=83.11  E-value=1.7  Score=37.16  Aligned_cols=122  Identities=10%  Similarity=0.064  Sum_probs=76.6

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +++..+...|.++.....+    ++..+.++++.+..+...+.                                ..+..
T Consensus        22 AiA~~la~~Ga~V~i~~r~----~~~~~~~~~l~~~~~~~~~~--------------------------------~~d~~   65 (274)
T d2pd4a1          22 GIAQSCFNQGATLAFTYLN----ESLEKRVRPIAQELNSPYVY--------------------------------ELDVS   65 (274)
T ss_dssp             HHHHHHHTTTCEEEEEESS----TTTHHHHHHHHHHTTCCCEE--------------------------------ECCTT
T ss_pred             HHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhhCCceeEe--------------------------------eeccc
Confidence            4667777888887665433    22333445554443333222                                22344


Q ss_pred             chhhHHHHHHHHHhhcCCcceEeccccccccCCCCCCchhhHHHHHhhhhhHHHHHHHhhhHHhHhcCCCeEEEeCCCC
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPL  213 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~Iv~vsS~~  213 (406)
                      +..+.++.+....+.+|++|++|+|+|......+.+...+.+...+..+....+.....+...+.+. ...--.+....
T Consensus        66 ~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s  143 (274)
T d2pd4a1          66 KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL-LNNGASVLTLS  143 (274)
T ss_dssp             CHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEE
T ss_pred             chhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccc-cccCcceeeec
Confidence            5677888999999999999999999999987777666666666666666666666555555555432 44444444333

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=82.77  E-value=0.65  Score=36.26  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=27.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113          10 LTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus        10 k~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      |+.+|  |.|-+|.++|+.|+++|++|++.+|+.++
T Consensus         2 kIgiI--G~G~mG~~ia~~l~~~g~~v~~~~~~~~~   35 (152)
T d1i36a2           2 RVGFI--GFGEVAQTLASRLRSRGVEVVTSLEGRSP   35 (152)
T ss_dssp             EEEEE--SCSHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred             EEEEE--cHHHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence            34444  45899999999999999999988877653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=82.75  E-value=0.6  Score=40.23  Aligned_cols=35  Identities=29%  Similarity=0.297  Sum_probs=31.3

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA   40 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~   40 (406)
                      .+++||+++|-| .|-.|+.+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468999999999 58899999999999999988664

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=82.71  E-value=0.57  Score=40.34  Aligned_cols=37  Identities=16%  Similarity=0.319  Sum_probs=31.6

Q ss_pred             CCcEEEEecCCchHHHHH-----HHHHHHcCCeEEEEecCCC
Q psy6113           8 SGLTIFITGASRGIGKAI-----ALKAAKDGANIVIAAKTAE   44 (406)
Q Consensus         8 ~gk~alVTGas~GIG~ai-----a~~La~~Ga~Vvl~~r~~~   44 (406)
                      .++.++|+.|-||.|+.+     |..|+++|.+|.+++.++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            466777777799999986     7999999999999999875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.18  E-value=4.3  Score=34.17  Aligned_cols=88  Identities=11%  Similarity=0.116  Sum_probs=55.3

Q ss_pred             HHHHHHH---cCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEe
Q psy6113          56 AAKEVED---AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVK  132 (406)
Q Consensus        56 ~~~~~~~---~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (406)
                      .+..+.+   .|.++  +-+| ++.+.++++.+++.+.+...++...                              .++
T Consensus        22 iA~~lA~~~~~G~~V--v~~~-r~~~~l~~~~~~l~~~~~~~~~~~~------------------------------~~D   68 (259)
T d1oaaa_          22 LAPQLARLLSPGSVM--LVSA-RSESMLRQLKEELGAQQPDLKVVLA------------------------------AAD   68 (259)
T ss_dssp             HHHHHHTTBCTTCEE--EEEE-SCHHHHHHHHHHHHHHCTTSEEEEE------------------------------ECC
T ss_pred             HHHHHHhcccCCCEE--EEEE-CCHHHHHHHHHHHHhhcCCceEEEE------------------------------Ecc
Confidence            3445543   34444  3445 5778899999988877554433222                              234


Q ss_pred             ccchhhHHHHHHHHHh----hcCCcceEeccccccccCCCCCCchhhH
Q psy6113         133 ASQGLEIQSAVNAAVD----KFGGIDILVNNASAISLTDTANTPLKKY  176 (406)
Q Consensus       133 ~~~~~~~~~~~~~~~~----~~g~id~li~~ag~~~~~~~~~~~~~~~  176 (406)
                      .++..+++++++.+.+    .++.+|++|||||.....+.......++
T Consensus        69 vs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~  116 (259)
T d1oaaa_          69 LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDL  116 (259)
T ss_dssp             TTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCH
T ss_pred             CCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCH
Confidence            4566677777777655    3578999999999887665544444443

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.80  E-value=1.2  Score=42.40  Aligned_cols=38  Identities=16%  Similarity=0.204  Sum_probs=31.8

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCC-eEEEEecCC
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGA-NIVIAAKTA   43 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~   43 (406)
                      .+|.+..|+|.|+ +|+|..+++.|+..|. ++.++|.+.
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            3567788999997 7999999999999997 788887543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.19  E-value=2.3  Score=31.27  Aligned_cols=38  Identities=13%  Similarity=-0.005  Sum_probs=29.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHH---cCCeEEEEecCCCCCC
Q psy6113           9 GLTIFITGASRGIGKAIALKAAK---DGANIVIAAKTAEPHP   47 (406)
Q Consensus         9 gk~alVTGas~GIG~aia~~La~---~Ga~Vvl~~r~~~~~~   47 (406)
                      .|.++|.|| |-+|..+|..|.+   .|.+|.++.|.+.-++
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~il~   58 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMILR   58 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSSST
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccccc
Confidence            367888887 7899999976665   4889999998876544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.93  E-value=0.79  Score=37.53  Aligned_cols=33  Identities=12%  Similarity=0.120  Sum_probs=28.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      |+|.|| |=-|+..|.+|+++|.+|.++.++...
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~~   40 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDHY   40 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence            788887 455999999999999999999887653

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=80.85  E-value=0.85  Score=35.56  Aligned_cols=33  Identities=30%  Similarity=0.436  Sum_probs=27.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcC-CeEEEEecCCCC
Q psy6113          12 IFITGASRGIGKAIALKAAKDG-ANIVIAAKTAEP   45 (406)
Q Consensus        12 alVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~   45 (406)
                      +.+.|+ |-+|.++++.|.+.| ++|++.+|+.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~   36 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEK   36 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence            445566 899999999999988 899999998754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=80.81  E-value=0.88  Score=40.21  Aligned_cols=37  Identities=24%  Similarity=0.301  Sum_probs=30.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCC
Q psy6113           8 SGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEP   45 (406)
Q Consensus         8 ~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~   45 (406)
                      +.|.++|.||+ =-|+.+|..|++.|++|.++.++..-
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~i   37 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDHI   37 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCCC
Confidence            36889999984 45889999999999999999877653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=80.31  E-value=0.91  Score=38.69  Aligned_cols=35  Identities=29%  Similarity=0.453  Sum_probs=31.2

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA   40 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~   40 (406)
                      .+|+||+++|-| .|-.|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            368999999997 58899999999999999998665

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.27  E-value=1.1  Score=39.24  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=31.6

Q ss_pred             cccCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEe
Q psy6113           5 GKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAA   40 (406)
Q Consensus         5 ~~l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~   40 (406)
                      .+|+||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4789999999987 7899999999999999998765

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=80.27  E-value=0.59  Score=38.28  Aligned_cols=32  Identities=22%  Similarity=0.285  Sum_probs=28.2

Q ss_pred             cEEEEecCCchHHHH-----HHHHHHHcCCeEEEEec
Q psy6113          10 LTIFITGASRGIGKA-----IALKAAKDGANIVIAAK   41 (406)
Q Consensus        10 k~alVTGas~GIG~a-----ia~~La~~Ga~Vvl~~r   41 (406)
                      |.+.|||-+.|.|+.     +|+.|+++|++|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999999999985     68899999999999863

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.22  E-value=2.9  Score=35.37  Aligned_cols=74  Identities=24%  Similarity=0.289  Sum_probs=52.0

Q ss_pred             HHHHHHHHcCCeeeeeeecCCChHHHHHHHHHHHHhcCCccEEEecccccccCCCCCCChhhhhhhhhhccccceEEecc
Q psy6113          55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKAS  134 (406)
Q Consensus        55 ~~~~~~~~~g~~~~~~~~Dl~~~~~v~~~~~~i~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (406)
                      +++..+.+.|.++...  | .+.+..++..+++.+.++...+.                              .+.++.+
T Consensus        18 aia~~la~~Ga~V~i~--~-r~~~~~~~~~~~l~~~~~~~~~~------------------------------~~~~Dv~   64 (254)
T d2gdza1          18 AFAEALLLKGAKVALV--D-WNLEAGVQCKAALHEQFEPQKTL------------------------------FIQCDVA   64 (254)
T ss_dssp             HHHHHHHHTTCEEEEE--E-SCHHHHHHHHHHHTTTSCGGGEE------------------------------EEECCTT
T ss_pred             HHHHHHHHCCCEEEEE--E-CCHHHHHHHHHHHHHhcCCCcEE------------------------------EEEeecC
Confidence            3566777778776543  4 35667777777776544322221                              1234566


Q ss_pred             chhhHHHHHHHHHhhcCCcceEecccc
Q psy6113         135 QGLEIQSAVNAAVDKFGGIDILVNNAS  161 (406)
Q Consensus       135 ~~~~~~~~~~~~~~~~g~id~li~~ag  161 (406)
                      +..++++.++.+.+.||+||+||||||
T Consensus        65 ~~~~v~~~~~~~~~~~G~iDilVnnAg   91 (254)
T d2gdza1          65 DQQQLRDTFRKVVDHFGRLDILVNNAG   91 (254)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CHHHHHHHHHHHHHHcCCcCeeccccc
Confidence            778889999999999999999999997

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=80.19  E-value=5.9  Score=31.30  Aligned_cols=80  Identities=19%  Similarity=0.189  Sum_probs=52.7

Q ss_pred             cCCcEEEEecCCchHHHHHHHHHHHcCCeEEEEecCCCCCCCCcccHHHHHHHHHHc-CCeeeeeeecCCChHHHHHHHH
Q psy6113           7 LSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDA-GGNCLPCIVDIRDEHAVQSAVN   85 (406)
Q Consensus         7 l~gk~alVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~Dl~~~~~v~~~~~   85 (406)
                      ...-.++|.|+ +=-|++-++.....|+.|.+.|.+.+++           ++++.. +.++   .+-.++.+.+++.+.
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l-----------~~l~~~~~~~~---~~~~~~~~~l~~~~~   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-----------SYLETLFGSRV---ELLYSNSAEIETAVA   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-----------HHHHHHHGGGS---EEEECCHHHHHHHHH
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHH-----------HHHHHhhcccc---eeehhhhhhHHHhhc
Confidence            44567888888 5679999999999999999999986642           223322 2222   233455555544443


Q ss_pred             HHHHhcCCccEEEecccccccCC
Q psy6113          86 AAVDKFGGIDILVNNASAISLTD  108 (406)
Q Consensus        86 ~i~~~~g~iD~linnAG~~~~~~  108 (406)
                             .-|++|..+=+.....
T Consensus        95 -------~aDivI~aalipG~~a  110 (168)
T d1pjca1          95 -------EADLLIGAVLVPGRRA  110 (168)
T ss_dssp             -------TCSEEEECCCCTTSSC
T ss_pred             -------cCcEEEEeeecCCccc
Confidence                   4699999888755443