Diaphorina citri psyllid: psy6127


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-----
MDSGALSKHITMFAEELQSGELSLALSMSALTCINEILKGPIENNSVLNKSNSTNDFSVLEETAKRLMCLKLCPGNSLADESGVLNLSCFPNISSLEIKRIDTEEIVLNPSCLIKLKEIKCMLAQKAVPKILKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLSAD
cccHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccccccEEEEccccccEEEEHHHHEEEEEEEEccccEEcccccCEEEEECccccCEEEEECccccEEEccccccccEEccEEEccccccEEEEEEEccccCEEEEcccccccEEEEEEcccccEEEEEccccCEEEEEEEEccccEEEEEEECcccccEEEEEcccEEEEEEcccccccccccEEEEEEcccccEEEEECccccEEEEEccccCEEEEEccccccEEEEEEcccccEEEEEEccccccEEEEEccccCEEEEEccccccEEEEEEcccccEEEEECccccEEEEEcccccEEEEECccccEEEEEEcccccEEEEECccccEEEEEccccccccccEEcccccccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEcccccccccEEEEEcccccEEEEECccccEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEccccEEEccccccc
*********ITMFAEELQSGELSLALSMSALTCINEILKGPIENNSVLNKSNSTNDFSVLEETAKRLMCLKLCPGNSLADESGVLNLSCFPNISSLEIKRIDTEEIVLNPSCLIKLKEIKCMLAQKAVPKILKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLSA*
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MDSGALSKHITMFAEELQSGELSLALSMSALTCINEILKGPIENNSVLNKSNSTNDFSVLEETAKRLMCLKLCPGNSLADESGVLNLSCFPNISSLEIKRIDTEEIVLNPSCLIKLKEIKCMLAQKAVPKILKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLSAD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
WD repeat-containing protein 82 Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus.confidentQ6NV31
WD repeat-containing protein 82 Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus.confidentQ5ZMV7
WD repeat-containing protein 82 Regulatory component of the SET1 complex implicated in the tethering of this complex to transcriptional start sites of active genes. Facilitates histone H3 'Lys-4' methylation via recruitment of the SETD1A or SETD1B to the 'Ser-5' phosphorylated C-terminal domain (CTD) of RNA polymerase II large subunit (POLR2A). Component of PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.confidentQ6UXN9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0003682 [MF]chromatin bindingprobableGO:0003674, GO:0005488
GO:0048188 [CC]Set1C/COMPASS complexprobableGO:0031974, GO:0043229, GO:0005623, GO:0043227, GO:0043226, GO:0034708, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0035097, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422
GO:0000785 [CC]chromatinprobableGO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0043226, GO:0044422
GO:0042800 [MF]histone methyltransferase activity (H3-K4 specific)probableGO:0018024, GO:0042054, GO:0003824, GO:0008757, GO:0016740, GO:0016278, GO:0016279, GO:0016741, GO:0008170, GO:0008276, GO:0003674, GO:0008168
GO:0051568 [BP]histone H3-K4 methylationprobableGO:0006479, GO:0008213, GO:0044699, GO:0044267, GO:0044260, GO:0006325, GO:0071840, GO:0016043, GO:0071704, GO:0034968, GO:0016571, GO:0016570, GO:0032259, GO:0009987, GO:0006464, GO:0043412, GO:0036211, GO:0043414, GO:0008152, GO:0006996, GO:0044238, GO:0051276, GO:0019538, GO:0044763, GO:0044237, GO:0043170, GO:0008150, GO:0016568, GO:0016569
GO:0072357 [CC]PTW/PP1 phosphatase complexprobableGO:0043234, GO:0008287, GO:0032991, GO:0044464, GO:0005623, GO:0005575
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 133-144,155-511
View the alignment between query and template
View the model in PyMOL
Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 133-144,155-513
View the alignment between query and template
View the model in PyMOL