Psyllid ID: psy6127
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 515 | 2.2.26 [Sep-21-2011] | |||||||
| Q5ZMV7 | 313 | WD repeat-containing prot | yes | N/A | 0.601 | 0.990 | 0.614 | 1e-119 | |
| Q8BFQ4 | 313 | WD repeat-containing prot | yes | N/A | 0.601 | 0.990 | 0.614 | 1e-119 | |
| Q6UXN9 | 313 | WD repeat-containing prot | yes | N/A | 0.601 | 0.990 | 0.614 | 1e-119 | |
| Q6NV31 | 313 | WD repeat-containing prot | yes | N/A | 0.601 | 0.990 | 0.617 | 1e-119 | |
| Q58E77 | 313 | WD repeat-containing prot | N/A | N/A | 0.601 | 0.990 | 0.607 | 1e-117 | |
| Q6GL39 | 313 | WD repeat-containing prot | yes | N/A | 0.601 | 0.990 | 0.607 | 1e-117 | |
| Q640J6 | 313 | WD repeat-containing prot | N/A | N/A | 0.601 | 0.990 | 0.601 | 1e-116 | |
| Q9UT39 | 341 | Uncharacterized WD repeat | yes | N/A | 0.588 | 0.888 | 0.338 | 5e-45 | |
| P36104 | 329 | COMPASS component SWD2 OS | yes | N/A | 0.584 | 0.914 | 0.335 | 3e-43 | |
| O60137 | 357 | Set1 complex component sw | no | N/A | 0.541 | 0.781 | 0.318 | 2e-39 |
| >sp|Q5ZMV7|WDR82_CHICK WD repeat-containing protein 82 OS=Gallus gallus GN=WDR82 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 191/311 (61%), Positives = 246/311 (79%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K ++N++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNG IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGGYNNSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus. Gallus gallus (taxid: 9031) |
| >sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 OS=Mus musculus GN=Wdr82 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 191/311 (61%), Positives = 247/311 (79%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNGS IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
Regulatory component of the SET1 complex implicated in the tethering of this complex to transcriptional start sites of active genes. Facilitates histone H3 'Lys-4' methylation via recruitment of the SETD1A or SETD1B to the 'Ser-5' phosphorylated C-terminal domain (CTD) of RNA polymerase II large subunit (POLR2A). Component of PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. Possible role in telomere length maintenance and in mRNA processing. Mus musculus (taxid: 10090) |
| >sp|Q6UXN9|WDR82_HUMAN WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 191/311 (61%), Positives = 247/311 (79%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNGS IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
Regulatory component of the SET1 complex implicated in the tethering of this complex to transcriptional start sites of active genes. Facilitates histone H3 'Lys-4' methylation via recruitment of the SETD1A or SETD1B to the 'Ser-5' phosphorylated C-terminal domain (CTD) of RNA polymerase II large subunit (POLR2A). Component of PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. Homo sapiens (taxid: 9606) |
| >sp|Q6NV31|WDR82_DANRE WD repeat-containing protein 82 OS=Danio rerio GN=wdr82 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 192/311 (61%), Positives = 247/311 (79%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+SS+G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK ER CEWTGLKFS DGKLILVSTNG +R+ DAF G + S G N+
Sbjct: 181 KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WNAE G KV +LDG H V LQFNPK+ ASA
Sbjct: 241 VILEASFTPDSQFIMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus. Danio rerio (taxid: 7955) |
| >sp|Q58E77|WD82B_XENLA WD repeat-containing protein 82-B OS=Xenopus laevis GN=wdr82-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 189/311 (60%), Positives = 244/311 (78%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K ++N++RS+RVAKVFREN+DKIN D+S G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V SL++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVSLSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA G+NS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGINSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWT LKFS DGKLIL+STNG +RL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTALKFSNDGKLILLSTNGGFLRLVDAFKGAVMHTFGGYNNSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus. Xenopus laevis (taxid: 8355) |
| >sp|Q6GL39|WDR82_XENTR WD repeat-containing protein 82 OS=Xenopus tropicalis GN=wdr82 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 189/311 (60%), Positives = 243/311 (78%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K ++N++RS+RVAKVFREN+DKIN D+S G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWT LKFS DGKLIL+STNG +RL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTALKFSNDGKLILMSTNGGFLRLVDAFKGAVMHTFGGYNNSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEATFTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ SA
Sbjct: 241 VTLEATFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKHTGPITCLQFNPKFMTFTSA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus. Xenopus tropicalis (taxid: 8364) |
| >sp|Q640J6|WD82A_XENLA WD repeat-containing protein 82-A OS=Xenopus laevis GN=wdr82-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 187/311 (60%), Positives = 242/311 (77%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K ++ ++RS+RVAKVFREN+DKIN D+S G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDGVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FIS S DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISASLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWT LKFS DGKLIL+STNG +RL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTSLKFSQDGKLILMSTNGGFLRLVDAFKGAVMHTFGGYNNSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus. Xenopus laevis (taxid: 8355) |
| >sp|Q9UT39|YIQ4_SCHPO Uncharacterized WD repeat-containing protein C824.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC824.04 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 180/331 (54%), Gaps = 28/331 (8%)
Query: 207 LVRSYRVAKVFRENT--DKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTINSKK 263
++ S + A+ FR+N+ INS+DYS G + +CS DD + IYD +TI +
Sbjct: 5 ILSSLKPAQSFRDNSLGSFINSIDYSDSGEYVATTCSADDTVQIYDALDPKQVHTITCFE 64
Query: 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI 323
G+++ +FTH + ++TK + ++Y+S++DNK + YF GH VSS+ +SP++D F+
Sbjct: 65 TGIEVARFTHHDHNLLLSTTKGNKDIQYVSIYDNKRISYFSGHTDIVSSIEVSPIEDQFV 124
Query: 324 SGSYDKTVRVWDLRQPNN-VGMIQLSGNKPIAAYDPEGLAFAIGVNSDS-IKLYDVRSYD 381
S + DKT+++W + Q + +G + L + I AYDP GL FA+ +S S I LYDVR+Y
Sbjct: 125 STANDKTLKLWKMNQSSRCLGNLDLP-SLGIPAYDPTGLVFAVACHSLSRIFLYDVRNYG 183
Query: 382 KGPFASFKCPGERGC----------EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ 431
PF++F R EW ++FS DGK IL+ST ++ + DAF+G+ +
Sbjct: 184 SDPFSTFTIDDSRYLSRFSFPPMMPEWKHMEFSNDGKCILLSTRANVHYILDAFSGDVLS 243
Query: 432 SLSGV----LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY--KVCVLDGDHPSA 485
L +NN TF P FV + D +++WN + K +H
Sbjct: 244 RLEDFQELPFSNNFHGGSTTFVPQGNFVIGSADDRTLNVWNLRHTFHHKGKTRPPEHRIV 303
Query: 486 VQSL------QFNPKYHMLASACSNMAFWIP 510
QS+ ++NP+Y L +A S + FW+P
Sbjct: 304 SQSIINPGLVKYNPRYDQLLTAGSQLVFWLP 334
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|P36104|SWD2_YEAST COMPASS component SWD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 181/334 (54%), Gaps = 33/334 (9%)
Query: 199 TITKCSENLVRSYRVAKVFR---ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS 255
T++ NL++ ++ K F+ ++ + SL++ +G L++ S +D + +Y
Sbjct: 3 TVSINKPNLLK-FKHVKSFQPQEKDCGPVTSLNFDDNGQFLLTSSSNDTMQLYSATNCKF 61
Query: 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315
+TI SKKYG FTH++ I++ST + ++YL+L N+Y+RYF GH V+ L +
Sbjct: 62 LDTIASKKYGCHSAIFTHAQNECIYSSTMKNFDIKYLNLETNQYLRYFSGHGALVNDLKM 121
Query: 316 SPVDDSFISGSYDKTVRVWDLR--QPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD-SI 372
+PV+D+F+S SYD++VR+WDL+ +P V + L N AYDP GL FA+G + I
Sbjct: 122 NPVNDTFLSSSYDESVRLWDLKISKP-QVIIPSLVPN--CIAYDPSGLVFALGNPENFEI 178
Query: 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS 432
LY+++ +GPF K +W L+FS +GK +LV ++ +FDAF G Q
Sbjct: 179 GLYNLKKIQEGPFLIIKINDATFSQWNKLEFSNNGKYLLVGSSIGKHLIFDAFTG---QQ 235
Query: 433 LSGVLNNNASPLE-------ATFTPDSQFVASGSTDGQVHIWNAE----------RGYKV 475
L ++ A P+ A FTPD +FV DG++ IWN +G+
Sbjct: 236 LFELIGTRAFPMREFLDSGSACFTPDGEFVLGTDYDGRIAIWNHSDSISNKVLRPQGFIP 295
Query: 476 CVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWI 509
CV H + +S+ FNPKY M +A + F++
Sbjct: 296 CV---SHETCPRSIAFNPKYSMFVTADETVDFYV 326
|
Involved in mediating RNA polymerase II termination. Component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation-dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Component of the APT complex, which may be involved in polyadenylation-independent transcript 3'-end formation. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|O60137|SWD2_SCHPO Set1 complex component swd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swd2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 169/336 (50%), Gaps = 57/336 (16%)
Query: 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAS 282
+I SL + G L ++ DD + +Y+C G ++ SKKYG L +FTH + IHAS
Sbjct: 28 EITSLSFDDSGELCLASCTDDTLQLYNCISGKFVKSLASKKYGAHLGRFTHHSNSLIHAS 87
Query: 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342
TK D T+RYL + N+Y+RYFPGH + V+S+++SP D++F+S S D T+R+WDLR PN
Sbjct: 88 TKEDNTVRYLDVVTNRYLRYFPGHKQTVTSIDVSPADETFLSASLDNTIRLWDLRSPNCQ 147
Query: 343 GMIQLSGNKPIAAYDPEGLAFA-IGVNSDSIKLYDVRSYDKGPFA----SFKCPGERGCE 397
G++ +S + +AA+D GL FA + I LY+++S+D PF +F P R
Sbjct: 148 GLLNVS-SPVVAAFDATGLIFASVSERKYKISLYNIKSFDARPFQDIPLTFLPPHVR--- 203
Query: 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGN---------CVQSLSGVLNNNASPLEATF 448
++FS DGK +L++T + DA++G+ ++ G L AS A
Sbjct: 204 IANVEFSTDGKYLLLTTGNDFHYVIDAYSGSELLRVPSKVSTKTQDGNLTYYAS---ACM 260
Query: 449 TPDSQFVASGSTDGQV---------------HIWNA--ERGYKVCVLDGDH--------- 482
+PDS+F+ + + + HI N+ E G +
Sbjct: 261 SPDSKFLFTSYDNEHLCMYQLPELKQTVNSDHIVNSFTEMGLASTTPTSNSHSTENPLAI 320
Query: 483 ----------PSAVQSLQFNPKYHMLASACSNMAFW 508
P ++FNP++ L +A S + FW
Sbjct: 321 IPSSTSKNLLPETPSIVRFNPRFSQLVTAHSGVIFW 356
|
The Set1 complex specifically methylates 'Lys-4' of histone H3. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 515 | ||||||
| 91084031 | 316 | PREDICTED: similar to WD40 protein [Trib | 0.601 | 0.981 | 0.700 | 1e-133 | |
| 312379941 | 314 | hypothetical protein AND_08073 [Anophele | 0.6 | 0.984 | 0.690 | 1e-132 | |
| 332373966 | 316 | unknown [Dendroctonus ponderosae] | 0.6 | 0.977 | 0.703 | 1e-132 | |
| 58391653 | 314 | AGAP009700-PA [Anopheles gambiae str. PE | 0.6 | 0.984 | 0.690 | 1e-132 | |
| 157115819 | 314 | COMPASS component SWD2, putative [Aedes | 0.6 | 0.984 | 0.683 | 1e-132 | |
| 170039925 | 314 | WD repeat protein 82 [Culex quinquefasci | 0.6 | 0.984 | 0.687 | 1e-132 | |
| 242011252 | 336 | COMPASS component SWD2, putative [Pedicu | 0.603 | 0.925 | 0.689 | 1e-131 | |
| 345488681 | 315 | PREDICTED: WD repeat-containing protein | 0.601 | 0.984 | 0.688 | 1e-131 | |
| 357612419 | 314 | WD40 protein [Danaus plexippus] | 0.601 | 0.987 | 0.688 | 1e-131 | |
| 322783665 | 315 | hypothetical protein SINV_04225 [Solenop | 0.601 | 0.984 | 0.688 | 1e-131 |
| >gi|91084031|ref|XP_966556.1| PREDICTED: similar to WD40 protein [Tribolium castaneum] gi|270008003|gb|EFA04451.1| hypothetical protein TcasGA2_TC014755 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 218/311 (70%), Positives = 265/311 (85%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K + +VRS+RVAKVFRENTDKINS+D+S G LISCS+DDQI+IYDCE+GT T+NS
Sbjct: 4 KLVDQVVRSFRVAKVFRENTDKINSIDFSPSGETLISCSEDDQIVIYDCEKGTQVRTVNS 63
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+K TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV SL LSPV+D+
Sbjct: 64 KKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVSLCLSPVEDT 123
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++ LSG +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 124 FLSGSLDKTLRLWDLRSPNCQGLMHLSG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 182
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGSIIRL DAF+G +Q+ +G LNN
Sbjct: 183 KGPFVTFKLTQEKECDWTGLKFSRDGKTILISTNGSIIRLIDAFHGTPLQTFTGHLNNKG 242
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQF+ SGSTDG+VH+WNA+ GYKVCVL+ DHP VQ +QFNPKY MLASA
Sbjct: 243 IPIEASFSPDSQFIFSGSTDGRVHVWNADTGYKVCVLNADHPGPVQCVQFNPKYMMLASA 302
Query: 502 CSNMAFWIPTL 512
C+NMAFW+P++
Sbjct: 303 CTNMAFWLPSI 313
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312379941|gb|EFR26077.1| hypothetical protein AND_08073 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 214/310 (69%), Positives = 270/310 (87%), Gaps = 1/310 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++VRS++VAKVFRENTDKIN++D+S++G +LISCS+DDQI++YDCE+GT T+NS
Sbjct: 2 KLIDSVVRSFKVAKVFRENTDKINAIDFSANGEMLISCSEDDQIVLYDCEKGTQIRTVNS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+ TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV SLN+SPV+D+
Sbjct: 62 KKYGVDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLNISPVEDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++QL+G +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 122 FLSGSLDKTLRLWDLRSPNCQGVMQLNG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGSIIRL DAF+G +Q+ +G LNN
Sbjct: 181 KGPFVTFKLNQEKECDWTGLKFSRDGKTILISTNGSIIRLIDAFHGTPLQTFTGYLNNKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQF+ SGSTDG+VH+WNA+ GYK+CVL+GDHP VQ +QFNPK+ MLASA
Sbjct: 241 IPIEASFSPDSQFIFSGSTDGRVHVWNADTGYKICVLNGDHPGPVQCVQFNPKFMMLASA 300
Query: 502 CSNMAFWIPT 511
C+NMAFW+PT
Sbjct: 301 CTNMAFWLPT 310
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332373966|gb|AEE62124.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 218/310 (70%), Positives = 264/310 (85%), Gaps = 1/310 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K + +VRS+RVAKVFRENTDKINS+D+S+ G LISCS+DDQI+IYDCE+GT T+NS
Sbjct: 4 KLVDQVVRSFRVAKVFRENTDKINSIDFSTSGDTLISCSEDDQIVIYDCEKGTQVRTVNS 63
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+K TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV SL LSPV+D+
Sbjct: 64 KKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVSLCLSPVEDT 123
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++ LSG +P+AAYDPEGL FA GVNS+ IKLYD+RS+D
Sbjct: 124 FLSGSMDKTLRLWDLRSPNCQGLMHLSG-RPVAAYDPEGLIFAAGVNSECIKLYDLRSFD 182
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGSIIRL DAF+G +Q+ +G LNN
Sbjct: 183 KGPFVTFKLAQEKECDWTGLKFSRDGKTILISTNGSIIRLIDAFHGTPLQTFTGHLNNKG 242
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQF+ SGSTDG+VH+WNA+ GYKVCVL+ DHP VQ +QFNPKY MLASA
Sbjct: 243 IPIEASFSPDSQFIFSGSTDGRVHVWNADTGYKVCVLNADHPGPVQCVQFNPKYMMLASA 302
Query: 502 CSNMAFWIPT 511
C+NMAFWIP+
Sbjct: 303 CTNMAFWIPS 312
|
Source: Dendroctonus ponderosae Species: Dendroctonus ponderosae Genus: Dendroctonus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|58391653|ref|XP_318756.2| AGAP009700-PA [Anopheles gambiae str. PEST] gi|55235879|gb|EAA14561.2| AGAP009700-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 214/310 (69%), Positives = 270/310 (87%), Gaps = 1/310 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++VRS++VAKVFRENTDKIN++D+S++G +LISCS+DDQI++YDCE+GT T+NS
Sbjct: 3 KLIDSVVRSFKVAKVFRENTDKINAIDFSANGEMLISCSEDDQIVLYDCEKGTQIRTVNS 62
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+ TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV SLN+SPV+D+
Sbjct: 63 KKYGVDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLNISPVEDT 122
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++QL+G +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 123 FLSGSLDKTLRLWDLRSPNCQGVMQLNG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 181
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGSIIRL DAF+G +Q+ +G LNN
Sbjct: 182 KGPFVTFKLNQEKECDWTGLKFSRDGKTILISTNGSIIRLIDAFHGTPLQTFTGHLNNKG 241
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQF+ SGSTDG+VH+WNA+ GYK+CVL+GDHP VQ +QFNPK+ MLASA
Sbjct: 242 IPIEASFSPDSQFIFSGSTDGRVHVWNADTGYKICVLNGDHPGPVQCVQFNPKFMMLASA 301
Query: 502 CSNMAFWIPT 511
C+NMAFW+PT
Sbjct: 302 CTNMAFWLPT 311
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157115819|ref|XP_001658297.1| COMPASS component SWD2, putative [Aedes aegypti] gi|108883467|gb|EAT47692.1| AAEL001211-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 212/310 (68%), Positives = 270/310 (87%), Gaps = 1/310 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K ++++VRS++VAKVFRENTDKIN++DYSS+G +LISCS+DDQI+++DCE+GT T+NS
Sbjct: 2 KLTDSVVRSFKVAKVFRENTDKINAIDYSSNGEMLISCSEDDQIVLFDCEKGTQIRTVNS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+ TAIH+STK+D T+RYLSLHDNKY+RYFPGH +KV SLN+SPV+D+
Sbjct: 62 KKYGVDLIHFTHANNTAIHSSTKIDDTIRYLSLHDNKYLRYFPGHSKKVISLNISPVEDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++ L+G +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 122 FLSGSLDKTLRLWDLRSPNCQGVMHLNG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGSIIRL DAF+G +Q+ +G LNN
Sbjct: 181 KGPFVTFKLNQEKECDWTGLKFSRDGKTILISTNGSIIRLIDAFHGTPLQTFTGHLNNKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQF+ SGSTDG+VH+WNA+ GYK+CVL+GDHP +Q +QFNPK+ MLASA
Sbjct: 241 IPIEASFSPDSQFIFSGSTDGRVHVWNADTGYKICVLNGDHPGPIQCVQFNPKFMMLASA 300
Query: 502 CSNMAFWIPT 511
C+NMAFW+PT
Sbjct: 301 CTNMAFWLPT 310
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170039925|ref|XP_001847768.1| WD repeat protein 82 [Culex quinquefasciatus] gi|167863510|gb|EDS26893.1| WD repeat protein 82 [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 213/310 (68%), Positives = 269/310 (86%), Gaps = 1/310 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++VRS++VAKVFRENTDKIN++D+SS+G +LISCS+DDQI++YDCE+GT T+NS
Sbjct: 2 KLIDSVVRSFKVAKVFRENTDKINAIDFSSNGEMLISCSEDDQIVLYDCEKGTQIRTVNS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+ TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV SLN+SPV+D+
Sbjct: 62 KKYGVDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLNISPVEDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++ L+G +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 122 FLSGSLDKTLRLWDLRSPNCQGVMHLNG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGSIIRL DAF+G +Q+ +G LNN
Sbjct: 181 KGPFVTFKLNQEKECDWTGLKFSRDGKTILISTNGSIIRLIDAFHGTPLQTFTGHLNNKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQF+ SGSTDG+VH+WNA+ GYK+CVL+GDHP +Q +QFNPK+ MLASA
Sbjct: 241 IPIEASFSPDSQFIFSGSTDGRVHVWNADTGYKICVLNGDHPGPIQCVQFNPKFMMLASA 300
Query: 502 CSNMAFWIPT 511
C+NMAFW+PT
Sbjct: 301 CTNMAFWLPT 310
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242011252|ref|XP_002426369.1| COMPASS component SWD2, putative [Pediculus humanus corporis] gi|212510446|gb|EEB13631.1| COMPASS component SWD2, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 215/312 (68%), Positives = 265/312 (84%), Gaps = 1/312 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K + +VRS++VAKVFREN+DKINS+D+S+ G LISCS+DDQI+IYDCE+GT T+NS
Sbjct: 24 KLVDQVVRSFKVAKVFRENSDKINSIDFSATGDTLISCSEDDQIVIYDCEKGTQMRTVNS 83
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+K TAIH+STKVD T+RYLSLHDNK++RYFPGH +KV SL +SPV+D+
Sbjct: 84 KKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKFIRYFPGHTKKVVSLCISPVEDT 143
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+S S DKT+R+WDLR PN G++ LSG +P+AAYDPEGL FA GVNSDS+KLYD+RS+D
Sbjct: 144 FLSASLDKTLRLWDLRSPNCQGLMHLSG-RPVAAYDPEGLIFAAGVNSDSVKLYDLRSFD 202
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGSIIRL DAF G +Q+ +G LNN
Sbjct: 203 KGPFITFKLNQEKECDWTGLKFSRDGKTILISTNGSIIRLIDAFQGTPLQTFTGHLNNKG 262
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQFV SGSTDG+VH+WNAE GYKVCVL+ +HP VQ +QFNPKY MLASA
Sbjct: 263 IPIEASFSPDSQFVFSGSTDGRVHVWNAETGYKVCVLNANHPGPVQCVQFNPKYMMLASA 322
Query: 502 CSNMAFWIPTLS 513
C+NMAFW+PT++
Sbjct: 323 CTNMAFWLPTVN 334
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345488681|ref|XP_001604288.2| PREDICTED: WD repeat-containing protein 82-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/311 (68%), Positives = 268/311 (86%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K + +VRS++VAK+FREN+D+INS+D+S+ G LISCS+DDQI+IYDCE+GT T+NS
Sbjct: 2 KLVDTVVRSFKVAKIFRENSDRINSIDFSTTGDTLISCSEDDQIVIYDCEKGTQMRTVNS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+K TAIH+STK+D T+RYLSLHDNKY+RYFPGH +KV SL +SPV+D+
Sbjct: 62 KKYGVDLIHFTHAKNTAIHSSTKIDDTIRYLSLHDNKYIRYFPGHTKKVVSLCISPVEDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DK++R+WDLR PN G++ +SG +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 122 FLSGSLDKSLRLWDLRSPNCHGVMNVSG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK ILVSTNGSIIRL DAF+G +Q+ +G LNN
Sbjct: 181 KGPFTNFKLSHEKECDWTGLKFSRDGKTILVSTNGSIIRLIDAFHGTPLQTFTGHLNNKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQFV SGSTDG+VH+WNA+ GYKVCVL+GDHP+ VQ +QFNPKY MLASA
Sbjct: 241 IPIEASFSPDSQFVFSGSTDGRVHVWNADTGYKVCVLNGDHPAPVQCVQFNPKYMMLASA 300
Query: 502 CSNMAFWIPTL 512
C+NMAFW+PT+
Sbjct: 301 CTNMAFWLPTV 311
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357612419|gb|EHJ67988.1| WD40 protein [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/311 (68%), Positives = 267/311 (85%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K + +VRS++VAKVFRENTDKINS+D+S G LISCS+DDQI+IYDCE+GT T+NS
Sbjct: 2 KLVDQVVRSFKVAKVFRENTDKINSIDFSPSGETLISCSEDDQIVIYDCEKGTQMITVNS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+K TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV +L LSPV+D+
Sbjct: 62 KKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLCLSPVEDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++ LSG +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 122 FLSGSLDKTLRLWDLRSPNCQGLMHLSG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK +L+STNGSIIRL DA++G +Q+ +G LNN
Sbjct: 181 KGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTNGSIIRLVDAYHGTPLQTFTGHLNNKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQ+V SGSTDG+VH+WNA+ GYKVCVL+GDHP+ +Q +QFNPKY +LASA
Sbjct: 241 IPIEASFSPDSQYVFSGSTDGRVHVWNADTGYKVCVLNGDHPAPIQCVQFNPKYMLLASA 300
Query: 502 CSNMAFWIPTL 512
C+NMAFW+PT+
Sbjct: 301 CTNMAFWLPTI 311
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322783665|gb|EFZ11003.1| hypothetical protein SINV_04225 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/311 (68%), Positives = 267/311 (85%), Gaps = 1/311 (0%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++VRS++VAKVFRENTD+INS+D+S +G LISCS+DDQI+IYDCE+GT T+NS
Sbjct: 2 KLVDHVVRSFKVAKVFRENTDRINSIDFSPNGDTLISCSEDDQIVIYDCEKGTQVRTVNS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+K TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV SL +SP++D+
Sbjct: 62 KKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVSLCISPIEDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DK++R+WDLR PN G++ +SG +P+AAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 122 FLSGSLDKSLRLWDLRSPNCHGVMNVSG-RPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGS IRL DAF+G +Q+ +G LNN
Sbjct: 181 KGPFVTFKLSQEKECDWTGLKFSRDGKTILISTNGSTIRLIDAFHGTPLQTFAGYLNNKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
+EA+F+PDSQFV SGSTDG+VH+WNAE GYKVCVL+GDHP+ VQ +QFNPKY MLASA
Sbjct: 241 IAIEASFSPDSQFVFSGSTDGRVHVWNAETGYKVCVLNGDHPAPVQCIQFNPKYMMLASA 300
Query: 502 CSNMAFWIPTL 512
C+NMAFW+PT+
Sbjct: 301 CTNMAFWLPTI 311
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 515 | ||||||
| FB|FBgn0032030 | 317 | Wdr82 [Drosophila melanogaster | 0.6 | 0.974 | 0.683 | 2.3e-119 | |
| UNIPROTKB|Q5ZMV7 | 313 | WDR82 "WD repeat-containing pr | 0.601 | 0.990 | 0.614 | 1e-109 | |
| UNIPROTKB|E2RGF2 | 313 | WDR82 "Uncharacterized protein | 0.601 | 0.990 | 0.614 | 1.6e-109 | |
| UNIPROTKB|Q6UXN9 | 313 | WDR82 "WD repeat-containing pr | 0.601 | 0.990 | 0.614 | 1.6e-109 | |
| UNIPROTKB|F2Z5U3 | 313 | WDR82 "Uncharacterized protein | 0.601 | 0.990 | 0.614 | 1.6e-109 | |
| MGI|MGI:1924555 | 313 | Wdr82 "WD repeat domain contai | 0.601 | 0.990 | 0.614 | 1.6e-109 | |
| UNIPROTKB|F1MG94 | 602 | WDR82 "Uncharacterized protein | 0.588 | 0.503 | 0.611 | 1.4e-105 | |
| ZFIN|ZDB-GENE-030131-333 | 600 | wdr82 "WD repeat domain contai | 0.588 | 0.505 | 0.615 | 3.6e-105 | |
| UNIPROTKB|E1BRZ6 | 601 | TWF2 "Twinfilin-2" [Gallus gal | 0.588 | 0.504 | 0.609 | 7.5e-105 | |
| DICTYBASE|DDB_G0278945 | 319 | DDB_G0278945 "WD repeat-contai | 0.603 | 0.974 | 0.482 | 2e-79 |
| FB|FBgn0032030 Wdr82 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1175 (418.7 bits), Expect = 2.3e-119, P = 2.3e-119
Identities = 212/310 (68%), Positives = 263/310 (84%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++VRS++VAK+FRENTDKIN++D++ +G LISCS+DDQI+IYDCE+GT T+NS
Sbjct: 4 KLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNS 63
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI FTH+ TAIH+STKVD T+RYLSLHDNKY+RYFPGH +KV SL +SPV+D+
Sbjct: 64 KKYGVDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDT 123
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
F+SGS DKT+R+WDLR PN G++ LSG +PIAAYDPEGL FA GVNS+SIKLYD+RS+D
Sbjct: 124 FLSGSLDKTLRLWDLRSPNCQGLMHLSG-RPIAAYDPEGLIFAAGVNSESIKLYDLRSFD 182
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPF +FK E+ C+WTGLKFS DGK IL+STNGS+IRL DAF+G +Q+ +G NN
Sbjct: 183 KGPFVTFKLNQEKECDWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKG 242
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
P+EA+F+PDSQF+ SGSTDG+VHIWNA+ G KV VL+GDHP VQ +QFNPKY MLASA
Sbjct: 243 IPIEASFSPDSQFIFSGSTDGRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASA 302
Query: 502 CSNMAFWIPT 511
C+NMAFW+PT
Sbjct: 303 CTNMAFWLPT 312
|
|
| UNIPROTKB|Q5ZMV7 WDR82 "WD repeat-containing protein 82" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 191/311 (61%), Positives = 246/311 (79%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K ++N++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNG IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGGYNNSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
|
| UNIPROTKB|E2RGF2 WDR82 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 191/311 (61%), Positives = 247/311 (79%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNGS IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
|
| UNIPROTKB|Q6UXN9 WDR82 "WD repeat-containing protein 82" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 191/311 (61%), Positives = 247/311 (79%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNGS IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
|
| UNIPROTKB|F2Z5U3 WDR82 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 191/311 (61%), Positives = 247/311 (79%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNGS IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
|
| MGI|MGI:1924555 Wdr82 "WD repeat domain containing 82" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 191/311 (61%), Positives = 247/311 (79%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNGS IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNMAFWIPTL 512
CSNMAFW+PT+
Sbjct: 301 CSNMAFWLPTI 311
|
|
| UNIPROTKB|F1MG94 WDR82 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 186/304 (61%), Positives = 240/304 (78%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK +R CEWTGLKFS DGKLIL+STNGS IRL DAF G + + G N+ A
Sbjct: 181 KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ ASA
Sbjct: 241 VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA 300
Query: 502 CSNM 505
CSNM
Sbjct: 301 CSNM 304
|
|
| ZFIN|ZDB-GENE-030131-333 wdr82 "WD repeat domain containing 82" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 187/304 (61%), Positives = 240/304 (78%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K +++++RS+RVAKVFREN+DKIN D+SS+G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDSVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
KGPFA+FK ER CEWTGLKFS DGKLILVSTNG +R+ DAF G + S G N+
Sbjct: 181 KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKG 240
Query: 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501
LEA+FTPDSQF+ GS DG++H+WNAE G KV +LDG H V LQFNPK+ ASA
Sbjct: 241 VILEASFTPDSQFIMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA 300
Query: 502 CSNM 505
CSNM
Sbjct: 301 CSNM 304
|
|
| UNIPROTKB|E1BRZ6 TWF2 "Twinfilin-2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
Identities = 186/305 (60%), Positives = 239/305 (78%)
Query: 202 KCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS 261
K ++N++RS+RVAKVFREN+DKIN D+S +G +IS SDDD I++YDC++G K T+ S
Sbjct: 2 KLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYS 61
Query: 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321
KKYGVDLI++TH+ T +++S K+D T+RYLSLHDNKY+RYFPGH ++V +L++SPVDD+
Sbjct: 62 KKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSPVDDT 121
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
FISGS DKT+R+WDLR PN G++ L G KP+ ++DPEGL FA GVNS+ +KLYD+RS+D
Sbjct: 122 FISGSLDKTIRLWDLRSPNCQGLMHLQG-KPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180
Query: 382 K-GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN 440
K GPFA+FK +R CEWTGLKFS DGKLIL+STNG IRL DAF G + + G N+
Sbjct: 181 KKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGGYNNSK 240
Query: 441 ASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500
A LEA+FTPDSQF+ GS DG++H+WN E G KV VLDG H + LQFNPK+ AS
Sbjct: 241 AVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKFMTFAS 300
Query: 501 ACSNM 505
ACSNM
Sbjct: 301 ACSNM 305
|
|
| DICTYBASE|DDB_G0278945 DDB_G0278945 "WD repeat-containing protein 82" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 152/315 (48%), Positives = 222/315 (70%)
Query: 198 RTITKCSENLVRSYRVAKVFRE-NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK 256
++ + ++N+V++ + K+ ++ N+ INS+D++ DGSLLI+ SDD+ I +Y+ + G +
Sbjct: 2 KSTLRLTDNVVQNMGIGKLHKDDNSSVINSMDFNKDGSLLITASDDESIHLYNIDTGELQ 61
Query: 257 NTINSKKYGVDLIKFTHSKTTAIHASTKV-DATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315
T+NSKKYGVDLIKFTH+ + I AS D +LRYLSLHDNKY++YF GH KV S+++
Sbjct: 62 KTLNSKKYGVDLIKFTHNNNSIICASKNSWDESLRYLSLHDNKYLKYFKGHRNKVVSISM 121
Query: 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLY 375
SP++D F+SGS D T+R+WDLR G+++ +G +P ++DP+G+ FA V+ ++IKLY
Sbjct: 122 SPINDMFLSGSLDDTIRMWDLRTNVCQGLLRRNG-RPAVSFDPQGIIFATAVSVNTIKLY 180
Query: 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435
D+R+YDKGPF+SF EWT +KF+ DGK IL+ST +II L D+F G Q +
Sbjct: 181 DLRNYDKGPFSSFSIDHPIPVEWTSMKFTADGKYILLSTKTNIIFLIDSFTGEVKQRYTS 240
Query: 436 VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKY 495
N+N S +E++F+PD+Q+V SGS DG VHIW G +V V G H S V +Q+NP+
Sbjct: 241 FKNDNGSVIESSFSPDAQYVLSGSEDGTVHIWKTLTGEEVAVWGG-HSSTVGRVQWNPRS 299
Query: 496 HMLASACSNMAFWIP 510
M A+ACSN+AFWIP
Sbjct: 300 MMAATACSNLAFWIP 314
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5ZMV7 | WDR82_CHICK | No assigned EC number | 0.6141 | 0.6019 | 0.9904 | yes | N/A |
| Q6GL39 | WDR82_XENTR | No assigned EC number | 0.6077 | 0.6019 | 0.9904 | yes | N/A |
| Q6UXN9 | WDR82_HUMAN | No assigned EC number | 0.6141 | 0.6019 | 0.9904 | yes | N/A |
| Q8BFQ4 | WDR82_MOUSE | No assigned EC number | 0.6141 | 0.6019 | 0.9904 | yes | N/A |
| Q6NV31 | WDR82_DANRE | No assigned EC number | 0.6173 | 0.6019 | 0.9904 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 515 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-37 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-31 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-25 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-22 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-17 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-16 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 3e-16 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-13 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 6e-09 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 6e-06 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 6e-05 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 9e-05 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 7e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.001 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 0.004 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 3e-37
Identities = 89/298 (29%), Positives = 138/298 (46%), Gaps = 16/298 (5%)
Query: 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274
+ + +T + + +S DG LL + S D I ++D E G T+ V + +
Sbjct: 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASAD 62
Query: 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334
T AS D T+R L + VR GH VSS+ SP S S DKT++VW
Sbjct: 63 GTYL--ASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVW 120
Query: 335 DLRQPNNVGMIQLSG-NKPI--AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391
D+ + L G + A+ P+G A +IKL+D+R+ A+
Sbjct: 121 DVETGKCL--TTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT--GKCVATLT-- 174
Query: 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451
G G + + FSPDG+ +L S++ I+L+D G C+ +L G + F+PD
Sbjct: 175 GHTGEVNS-VAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG---HENGVNSVAFSPD 230
Query: 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWI 509
+ASGS DG + +W+ G V L G H ++V SL ++P LAS ++ I
Sbjct: 231 GYLLASGSEDGTIRVWDLRTGECVQTLSG-HTNSVTSLAWSPDGKRLASGSADGTIRI 287
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 3e-31
Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 21/254 (8%)
Query: 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIH 280
T + + S+DG+ L S S D I ++D E G T+ V + F+ I
Sbjct: 51 TGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGR--IL 108
Query: 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN 340
+S+ D T++ + K + GH V+S+ SP S S D T+++WDLR
Sbjct: 109 SSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR--T 166
Query: 341 NVGMIQLSG-NKPI--AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE-RGC 396
+ L+G + A+ P+G + +IKL+D+ + KC G RG
Sbjct: 167 GKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS--------TGKCLGTLRGH 218
Query: 397 E-W-TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQF 454
E + FSPDG L+ + IR++D G CVQ+LSG + S ++PD +
Sbjct: 219 ENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSG---HTNSVTSLAWSPDGKR 275
Query: 455 VASGSTDGQVHIWN 468
+ASGS DG + IW+
Sbjct: 276 LASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 1e-25
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK-PIA--AY 356
R GH V+ + SP +GS D T++VWDL + L G+ P+ A
Sbjct: 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLE--TGELLRTLKGHTGPVRDVAA 59
Query: 357 DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE-RG--CEWTGLKFSPDGKLILVS 413
+G A G + +I+L+D+ + +C G + + FSPDG+++ S
Sbjct: 60 SADGTYLASGSSDKTIRLWDLE--------TGECVRTLTGHTSYVSSVAFSPDGRILSSS 111
Query: 414 TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY 473
+ I+++D G C+ +L G + F+PD FVAS S DG + +W+ G
Sbjct: 112 SRDKTIKVWDVETGKCLTTLRG---HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGK 168
Query: 474 KVCVLDGDHPSAVQSLQFNPKYHMLASACSNM 505
V L G H V S+ F+P L S+ S+
Sbjct: 169 CVATLTG-HTGEVNSVAFSPDGEKLLSSSSDG 199
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (248), Expect = 1e-22
Identities = 98/320 (30%), Positives = 152/320 (47%), Gaps = 15/320 (4%)
Query: 190 SLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD-QIIIY 248
S+ + SS T +L ++ + +++ + SL +S DG LL S S D I ++
Sbjct: 124 SILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLW 183
Query: 249 DCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR-YFPGHV 307
D G +T+ V + F+ I AS D T+R L K +R GH
Sbjct: 184 DLRTGKPLSTLAGHTDPVSSLAFSPDGGLLI-ASGSSDGTIRLWDLSTGKLLRSTLSGHS 242
Query: 308 RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI--AAYDPEGLAFAI 365
V S SP SGS D T+R+WDLR +++ + + A+ P+G A
Sbjct: 243 DSVVSS-FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS 301
Query: 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS-TNGSIIRLFDA 424
G + +++L+D+ + + K G G + L FSPDG L++ ++ IRL+D
Sbjct: 302 GSSDGTVRLWDLETGKLLSSLTLK--GHEGPVSS-LSFSPDGSLLVSGGSDDGTIRLWDL 358
Query: 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPS 484
G +++L G N +F+PD + V+SGSTDG V +W+ G + LDG H S
Sbjct: 359 RTGKPLKTLEGHSNVL----SVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDG-HTS 413
Query: 485 AVQSLQFNPKYHMLASACSN 504
V SL F+P LAS S+
Sbjct: 414 RVTSLDFSPDGKSLASGSSD 433
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 84.4 bits (207), Expect = 2e-17
Identities = 79/339 (23%), Positives = 132/339 (38%), Gaps = 56/339 (16%)
Query: 172 HFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSS 231
L + S L S + S + + R + D I S+ +S
Sbjct: 17 KKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSS-LLLRGHEDSITSIAFSP 75
Query: 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG---VDLIKFTHSKTTAIHASTKVDAT 288
DG LL+S S D I ++D + G + L + + + AS+ +D T
Sbjct: 76 DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGT 135
Query: 289 LRYLSL-HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVGMIQ 346
++ L K +R GH V+SL SP SGS D T+++WDLR + +
Sbjct: 136 VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLA 195
Query: 347 LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD 406
+ + L FSPD
Sbjct: 196 GHTDPV----------------------------------------------SSLAFSPD 209
Query: 407 GKLILVS-TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465
G L++ S ++ IRL+D G ++S L+ ++ + ++F+PD +ASGS+DG +
Sbjct: 210 GGLLIASGSSDGTIRLWDLSTGKLLRS---TLSGHSDSVVSSFSPDGSLLASGSSDGTIR 266
Query: 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504
+W+ + H S+V S+ F+P +LAS S+
Sbjct: 267 LWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSD 305
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 81.7 bits (200), Expect = 2e-16
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 15/279 (5%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLI-SCSDDDQIIIYDCEQGTSKNTINSKKYGV 266
+R+ + +TD ++SL +S DG LLI S S D I ++D G + S
Sbjct: 185 LRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDS 244
Query: 267 DLIKFTHSKTTAIHASTKVDATLRYLSLH-DNKYVRYFPGHVRKVSSLNLSPVDDSFISG 325
+ F+ + S+ D T+R L + +R GH V S+ SP SG
Sbjct: 245 VVSSFSPDGSLLASGSS--DGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASG 302
Query: 326 SYDKTVRVWDLRQPNNVGMIQLSGNKPI---AAYDPEGLAFAIGVNSDSIKLYDVRSYDK 382
S D TVR+WDL + + L G++ ++ P+G G + D +R +D
Sbjct: 303 SSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGT----IRLWDL 358
Query: 383 GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNAS 442
K + + FSPDG+++ + +RL+D G+ +++L G + S
Sbjct: 359 RTGKPLKTLEGHSNVLS-VSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTS 417
Query: 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD 481
F+PD + +ASGS+D + +W+ + K D
Sbjct: 418 L---DFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPD 453
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 80.9 bits (198), Expect = 3e-16
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 11/292 (3%)
Query: 226 SLDYSSDGSLLISCSDDDQII-IYDCE-QGTSKNTINSKKYGVDLIKFTHSKTTAIHAST 283
+L S+L++ S D + ++D G T+ V + F+ S+
Sbjct: 116 ALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSS 175
Query: 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNV 342
D T++ L K + GH VSSL SP I SGS D T+R+WDL +
Sbjct: 176 L-DGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL 234
Query: 343 GM-IQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGL 401
+ + ++++ P+G A G + +I+L+D+RS +
Sbjct: 235 RSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLS----V 290
Query: 402 KFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD 461
FSPDGKL+ ++ +RL+D G + SL+ + + S V+ GS D
Sbjct: 291 AFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDD 350
Query: 462 GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513
G + +W+ G + + S V S+ F+P +++S ++ + LS
Sbjct: 351 GTIRLWDLRTGK--PLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLS 400
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
+R+ + +T ++NS+ +S DG L+S S D I ++D G T+ + GV+
Sbjct: 164 LRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVN 223
Query: 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY 327
+ F+ AS D T+R L + V+ GH V+SL SP SGS
Sbjct: 224 SVAFSPDGYLL--ASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSA 281
Query: 328 DKTVRVWD 335
D T+R+WD
Sbjct: 282 DGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.8 bits (138), Expect = 6e-09
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 7/200 (3%)
Query: 190 SLAHSRSSRTITKCSENLVRSYRVA------KVFRENTDKINSLDYSSDGSLLISCSDDD 243
S S + S+ +R + + + ++ + S+ +S DG LL S S D
Sbjct: 247 SSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDG 306
Query: 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF 303
+ ++D E G +++ K + + + S ++ S D L
Sbjct: 307 TVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKT 366
Query: 304 PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG-MIQLSGNKPIAAYDPEGLA 362
V S++ SP SGS D TVR+WDL + + + + + P+G +
Sbjct: 367 LEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKS 426
Query: 363 FAIGVNSDSIKLYDVRSYDK 382
A G + ++I+L+D+++ K
Sbjct: 427 LASGSSDNTIRLWDLKTSLK 446
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 6e-06
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
K +R GH V+S+ SP + SGS D TVRVWD
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 1e-05
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
+ ++ GH V+S+ SP SGS D T+++WD
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-05
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYD 249
S + K + +T + S+ +S DG L S SDD I ++D
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 6e-05
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYD 249
+ + +T + S+ +S DG+LL S SDD + ++D
Sbjct: 5 RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 9e-05
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 218 RENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKT 276
+E+ ++ S+DYSS D +LL S SDD + ++ QG S TI +K + ++F S++
Sbjct: 572 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFP-SES 629
Query: 277 TAIHASTKVDATLRYLSLHDNKY-VRYFPGHVRKVSSLNLSPVDDS-FISGSYDKTVRVW 334
A D + Y L + K + GH + VS + VD S +S S D T+++W
Sbjct: 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRF--VDSSTLVSSSTDNTLKLW 687
Query: 335 DL 336
DL
Sbjct: 688 DL 689
|
Length = 793 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 7e-04
Identities = 62/288 (21%), Positives = 114/288 (39%), Gaps = 47/288 (16%)
Query: 226 SLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN----------TINSKKYGVDLIKFTHSK 275
++ + DG + + +I I++CE SK G+ + S+
Sbjct: 488 AIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQ 547
Query: 276 TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI-SGSYDKTVRVW 334
AS+ + ++ + ++ V H ++V S++ S D + + SGS D +V++W
Sbjct: 548 V----ASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW 603
Query: 335 DLRQPNNVGMIQLSGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE 393
+ Q ++G I+ N + E G + A G + YD+R+ P
Sbjct: 604 SINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRN-----------PKL 652
Query: 394 RGCEWTG-------LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446
C G ++F L+ ST+ + ++L+D S+SG+ N +PL +
Sbjct: 653 PLCTMIGHSKTVSYVRFVDSSTLVSSSTDNT-LKLWD-----LSMSISGI---NETPLHS 703
Query: 447 --TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFN 492
T FV +DG +I +V V P V S +F
Sbjct: 704 FMGHTNVKNFVGLSVSDG--YIATGSETNEVFVYHKAFPMPVLSYKFK 749
|
Length = 793 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 36.5 bits (85), Expect = 0.001
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468
+G +++L G + F+PD +++ASGS DG + +W+
Sbjct: 1 SGELLKTLKG---HTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 34.6 bits (80), Expect = 0.004
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 427 GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468
G +++L G + F+PD +ASGS DG V +W+
Sbjct: 1 GKLLRTLKG---HTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 515 | |||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG1446|consensus | 311 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG1407|consensus | 313 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0288|consensus | 459 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0643|consensus | 327 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0275|consensus | 508 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| KOG0283|consensus | 712 | 100.0 | ||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG0772|consensus | 641 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.98 | |
| KOG0288|consensus | 459 | 99.98 | ||
| KOG0647|consensus | 347 | 99.98 | ||
| KOG0274|consensus | 537 | 99.98 | ||
| KOG0313|consensus | 423 | 99.97 | ||
| KOG0643|consensus | 327 | 99.97 | ||
| KOG0275|consensus | 508 | 99.97 | ||
| KOG2096|consensus | 420 | 99.97 | ||
| KOG0313|consensus | 423 | 99.97 | ||
| KOG0640|consensus | 430 | 99.97 | ||
| KOG0289|consensus | 506 | 99.97 | ||
| KOG0310|consensus | 487 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0274|consensus | 537 | 99.97 | ||
| KOG0973|consensus | 942 | 99.97 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.97 | |
| KOG0268|consensus | 433 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| PTZ00420 | 568 | coronin; Provisional | 99.97 | |
| KOG1036|consensus | 323 | 99.97 | ||
| KOG0305|consensus | 484 | 99.97 | ||
| KOG0294|consensus | 362 | 99.97 | ||
| KOG1408|consensus | 1080 | 99.97 | ||
| KOG0268|consensus | 433 | 99.97 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0300|consensus | 481 | 99.96 | ||
| KOG0310|consensus | 487 | 99.96 | ||
| KOG0305|consensus | 484 | 99.96 | ||
| KOG0283|consensus | 712 | 99.96 | ||
| KOG0299|consensus | 479 | 99.96 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.96 | |
| KOG1407|consensus | 313 | 99.96 | ||
| KOG0973|consensus | 942 | 99.96 | ||
| KOG2106|consensus | 626 | 99.96 | ||
| KOG0289|consensus | 506 | 99.96 | ||
| KOG1539|consensus | 910 | 99.96 | ||
| KOG1063|consensus | 764 | 99.95 | ||
| KOG0299|consensus | 479 | 99.95 | ||
| KOG0641|consensus | 350 | 99.95 | ||
| KOG0301|consensus | 745 | 99.95 | ||
| KOG0300|consensus | 481 | 99.95 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.95 | |
| KOG0640|consensus | 430 | 99.95 | ||
| KOG0772|consensus | 641 | 99.95 | ||
| KOG0308|consensus | 735 | 99.95 | ||
| KOG0641|consensus | 350 | 99.95 | ||
| KOG0301|consensus | 745 | 99.95 | ||
| KOG0308|consensus | 735 | 99.95 | ||
| KOG0647|consensus | 347 | 99.94 | ||
| KOG0294|consensus | 362 | 99.94 | ||
| KOG1446|consensus | 311 | 99.94 | ||
| KOG0646|consensus | 476 | 99.94 | ||
| KOG2055|consensus | 514 | 99.94 | ||
| KOG1332|consensus | 299 | 99.94 | ||
| KOG0639|consensus | 705 | 99.94 | ||
| KOG1063|consensus | 764 | 99.94 | ||
| KOG1274|consensus | 933 | 99.94 | ||
| KOG4283|consensus | 397 | 99.94 | ||
| KOG0264|consensus | 422 | 99.94 | ||
| KOG2106|consensus | 626 | 99.94 | ||
| KOG1273|consensus | 405 | 99.94 | ||
| KOG0639|consensus | 705 | 99.93 | ||
| KOG0646|consensus | 476 | 99.93 | ||
| KOG4328|consensus | 498 | 99.93 | ||
| KOG1332|consensus | 299 | 99.93 | ||
| KOG2445|consensus | 361 | 99.93 | ||
| KOG0650|consensus | 733 | 99.93 | ||
| KOG2048|consensus | 691 | 99.93 | ||
| KOG0321|consensus | 720 | 99.92 | ||
| KOG1408|consensus | 1080 | 99.92 | ||
| KOG2048|consensus | 691 | 99.92 | ||
| KOG2919|consensus | 406 | 99.92 | ||
| KOG0269|consensus | 839 | 99.92 | ||
| KOG2055|consensus | 514 | 99.92 | ||
| KOG0267|consensus | 825 | 99.92 | ||
| KOG0264|consensus | 422 | 99.91 | ||
| KOG4283|consensus | 397 | 99.91 | ||
| KOG1273|consensus | 405 | 99.91 | ||
| KOG0267|consensus | 825 | 99.91 | ||
| KOG1036|consensus | 323 | 99.91 | ||
| KOG4378|consensus | 673 | 99.91 | ||
| KOG1445|consensus | 1012 | 99.91 | ||
| KOG1274|consensus | 933 | 99.9 | ||
| KOG0321|consensus | 720 | 99.9 | ||
| KOG4328|consensus | 498 | 99.9 | ||
| KOG0269|consensus | 839 | 99.9 | ||
| KOG0302|consensus | 440 | 99.9 | ||
| KOG1034|consensus | 385 | 99.9 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.9 | |
| KOG2445|consensus | 361 | 99.89 | ||
| KOG4378|consensus | 673 | 99.88 | ||
| KOG1034|consensus | 385 | 99.88 | ||
| KOG0270|consensus | 463 | 99.88 | ||
| KOG0650|consensus | 733 | 99.88 | ||
| KOG0302|consensus | 440 | 99.87 | ||
| KOG1009|consensus | 434 | 99.87 | ||
| KOG4227|consensus | 609 | 99.87 | ||
| KOG1538|consensus | 1081 | 99.87 | ||
| KOG2096|consensus | 420 | 99.86 | ||
| KOG0303|consensus | 472 | 99.86 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.86 | |
| KOG0307|consensus | 1049 | 99.86 | ||
| KOG0642|consensus | 577 | 99.85 | ||
| KOG0322|consensus | 323 | 99.85 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.84 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.84 | |
| KOG0644|consensus | 1113 | 99.84 | ||
| KOG1310|consensus | 758 | 99.84 | ||
| KOG1963|consensus | 792 | 99.84 | ||
| KOG1334|consensus | 559 | 99.83 | ||
| KOG1188|consensus | 376 | 99.83 | ||
| KOG0270|consensus | 463 | 99.83 | ||
| KOG1445|consensus | 1012 | 99.82 | ||
| KOG1517|consensus | 1387 | 99.82 | ||
| KOG1538|consensus | 1081 | 99.82 | ||
| KOG0307|consensus | 1049 | 99.81 | ||
| KOG2110|consensus | 391 | 99.8 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.8 | |
| KOG1007|consensus | 370 | 99.79 | ||
| KOG2919|consensus | 406 | 99.79 | ||
| KOG1587|consensus | 555 | 99.78 | ||
| KOG4497|consensus | 447 | 99.78 | ||
| KOG1524|consensus | 737 | 99.78 | ||
| KOG1009|consensus | 434 | 99.78 | ||
| KOG1524|consensus | 737 | 99.77 | ||
| KOG1007|consensus | 370 | 99.77 | ||
| KOG2111|consensus | 346 | 99.77 | ||
| KOG0644|consensus | 1113 | 99.77 | ||
| KOG0642|consensus | 577 | 99.77 | ||
| KOG1963|consensus | 792 | 99.77 | ||
| KOG1517|consensus | 1387 | 99.76 | ||
| KOG1240|consensus | 1431 | 99.76 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.76 | |
| KOG0290|consensus | 364 | 99.76 | ||
| KOG0303|consensus | 472 | 99.75 | ||
| KOG0322|consensus | 323 | 99.75 | ||
| KOG4497|consensus | 447 | 99.75 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.74 | |
| KOG0649|consensus | 325 | 99.74 | ||
| KOG0771|consensus | 398 | 99.73 | ||
| KOG0649|consensus | 325 | 99.72 | ||
| KOG1523|consensus | 361 | 99.72 | ||
| KOG0290|consensus | 364 | 99.72 | ||
| KOG1188|consensus | 376 | 99.72 | ||
| KOG2110|consensus | 391 | 99.71 | ||
| KOG1523|consensus | 361 | 99.71 | ||
| KOG1587|consensus | 555 | 99.71 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.7 | |
| KOG0771|consensus | 398 | 99.7 | ||
| KOG2139|consensus | 445 | 99.7 | ||
| KOG2139|consensus | 445 | 99.7 | ||
| KOG4227|consensus | 609 | 99.7 | ||
| KOG1272|consensus | 545 | 99.7 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.69 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.68 | |
| KOG2394|consensus | 636 | 99.68 | ||
| KOG2321|consensus | 703 | 99.68 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.68 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.67 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.67 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.66 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.65 | |
| KOG1334|consensus | 559 | 99.65 | ||
| KOG1272|consensus | 545 | 99.62 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.62 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.61 | |
| KOG1354|consensus | 433 | 99.61 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.6 | |
| KOG2394|consensus | 636 | 99.59 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.58 | |
| KOG3881|consensus | 412 | 99.58 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.58 | |
| KOG2321|consensus | 703 | 99.58 | ||
| KOG2111|consensus | 346 | 99.58 | ||
| KOG1240|consensus | 1431 | 99.57 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.55 | |
| KOG1310|consensus | 758 | 99.55 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.55 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.55 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.54 | |
| KOG2315|consensus | 566 | 99.54 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.54 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.53 | |
| KOG3881|consensus | 412 | 99.52 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.52 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.51 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.51 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.5 | |
| KOG2315|consensus | 566 | 99.49 | ||
| KOG0974|consensus | 967 | 99.48 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.48 | |
| KOG2314|consensus | 698 | 99.45 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.45 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.45 | |
| KOG1409|consensus | 404 | 99.44 | ||
| KOG2041|consensus | 1189 | 99.43 | ||
| KOG4547|consensus | 541 | 99.39 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.37 | |
| KOG2314|consensus | 698 | 99.36 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.34 | |
| KOG4547|consensus | 541 | 99.32 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.32 | |
| KOG0974|consensus | 967 | 99.31 | ||
| KOG4532|consensus | 344 | 99.3 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.3 | |
| KOG1912|consensus | 1062 | 99.29 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.29 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.26 | |
| KOG1409|consensus | 404 | 99.24 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.24 | |
| KOG4190|consensus | 1034 | 99.23 | ||
| KOG1912|consensus | 1062 | 99.22 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.22 | |
| KOG0280|consensus | 339 | 99.22 | ||
| KOG1064|consensus | 2439 | 99.21 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.2 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 99.2 | |
| KOG0309|consensus | 1081 | 99.19 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.18 | |
| KOG4190|consensus | 1034 | 99.16 | ||
| KOG1832|consensus | 1516 | 99.16 | ||
| KOG4532|consensus | 344 | 99.12 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.11 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.11 | |
| KOG0280|consensus | 339 | 99.11 | ||
| KOG2041|consensus | 1189 | 99.09 | ||
| KOG1354|consensus | 433 | 99.09 | ||
| KOG1064|consensus | 2439 | 99.08 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 99.06 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.98 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.98 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.94 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.94 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.91 | |
| KOG3914|consensus | 390 | 98.91 | ||
| KOG0882|consensus | 558 | 98.9 | ||
| KOG2695|consensus | 425 | 98.9 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.87 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.85 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.84 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.82 | |
| KOG0882|consensus | 558 | 98.8 | ||
| KOG1645|consensus | 463 | 98.79 | ||
| KOG3914|consensus | 390 | 98.79 | ||
| KOG1275|consensus | 1118 | 98.78 | ||
| KOG1832|consensus | 1516 | 98.78 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.77 | |
| KOG0309|consensus | 1081 | 98.75 | ||
| KOG4714|consensus | 319 | 98.68 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.68 | |
| KOG1920|consensus | 1265 | 98.68 | ||
| KOG2066|consensus | 846 | 98.67 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.67 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.65 | |
| KOG2695|consensus | 425 | 98.64 | ||
| KOG1645|consensus | 463 | 98.62 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.62 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.59 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.55 | |
| KOG2114|consensus | 933 | 98.55 | ||
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 98.54 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.53 | |
| KOG2066|consensus | 846 | 98.51 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.47 | |
| KOG3617|consensus | 1416 | 98.45 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 98.43 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 98.43 | |
| KOG1920|consensus | 1265 | 98.43 | ||
| KOG4714|consensus | 319 | 98.42 | ||
| KOG4649|consensus | 354 | 98.41 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.4 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.4 | |
| KOG4649|consensus | 354 | 98.39 | ||
| KOG2114|consensus | 933 | 98.38 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.38 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.37 | |
| KOG1275|consensus | 1118 | 98.36 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.33 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.33 | |
| KOG3621|consensus | 726 | 98.29 | ||
| KOG3621|consensus | 726 | 98.23 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.21 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.19 | |
| KOG1008|consensus | 783 | 98.14 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.12 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.11 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.1 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 98.08 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 98.07 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.02 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 98.0 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 98.0 | |
| KOG3617|consensus | 1416 | 97.97 | ||
| KOG1008|consensus | 783 | 97.97 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.95 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.94 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.92 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.88 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.87 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.81 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.79 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.74 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.72 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.7 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.66 | |
| KOG4640|consensus | 665 | 97.64 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.6 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.55 | |
| KOG2395|consensus | 644 | 97.54 | ||
| KOG1897|consensus | 1096 | 97.51 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 97.5 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.46 | |
| KOG4640|consensus | 665 | 97.44 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.44 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.43 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 97.39 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 97.37 | |
| PRK10115 | 686 | protease 2; Provisional | 97.37 | |
| KOG1897|consensus | 1096 | 97.36 | ||
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 97.31 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.27 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.25 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.2 | |
| KOG2079|consensus | 1206 | 97.2 | ||
| KOG4441|consensus | 571 | 97.19 | ||
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 97.16 | |
| KOG4441|consensus | 571 | 97.01 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 97.01 | |
| KOG2395|consensus | 644 | 97.0 | ||
| KOG2079|consensus | 1206 | 96.96 | ||
| KOG4499|consensus | 310 | 96.95 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 96.91 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.74 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.73 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 96.69 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.67 | |
| KOG2444|consensus | 238 | 96.66 | ||
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.62 | |
| KOG2444|consensus | 238 | 96.58 | ||
| KOG4499|consensus | 310 | 96.5 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.41 | |
| KOG3630|consensus | 1405 | 96.2 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 96.1 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.01 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 96.01 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 95.99 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 95.99 | |
| PRK10115 | 686 | protease 2; Provisional | 95.96 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.94 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 95.89 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 95.84 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 95.75 | |
| PLN02153 | 341 | epithiospecifier protein | 95.56 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.51 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 95.47 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.46 | |
| KOG3630|consensus | 1405 | 95.42 | ||
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 95.39 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 95.3 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.22 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 95.17 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 95.17 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 95.16 | |
| KOG2280|consensus | 829 | 95.09 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 95.04 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 95.03 | |
| KOG2280|consensus | 829 | 94.95 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 94.92 | |
| smart00036 | 302 | CNH Domain found in NIK1-like kinases, mouse citro | 94.8 | |
| KOG2377|consensus | 657 | 94.74 | ||
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 94.48 | |
| PLN02193 | 470 | nitrile-specifier protein | 94.43 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 94.19 | |
| KOG1916|consensus | 1283 | 94.09 | ||
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 94.05 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 94.03 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 93.9 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 93.8 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 93.59 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 93.58 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 93.55 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 93.55 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 93.38 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 93.37 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 93.31 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 93.2 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 92.88 | |
| PLN02153 | 341 | epithiospecifier protein | 92.86 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 92.64 | |
| KOG1898|consensus | 1205 | 92.58 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 92.39 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 92.32 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 92.25 | |
| PF10433 | 504 | MMS1_N: Mono-functional DNA-alkylating methyl meth | 92.17 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 92.09 | |
| KOG2377|consensus | 657 | 92.07 | ||
| PLN02193 | 470 | nitrile-specifier protein | 92.06 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 91.93 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 91.83 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 91.75 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 91.59 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 91.56 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 91.41 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 90.79 | |
| PF03022 | 287 | MRJP: Major royal jelly protein; InterPro: IPR0035 | 90.78 | |
| KOG2247|consensus | 615 | 90.75 | ||
| PF05935 | 477 | Arylsulfotrans: Arylsulfotransferase (ASST); Inter | 90.71 | |
| KOG4659|consensus | 1899 | 90.69 | ||
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 90.67 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 90.52 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 90.42 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 90.24 | |
| KOG1916|consensus | 1283 | 90.05 | ||
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 89.76 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 89.71 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 89.63 | |
| PF10433 | 504 | MMS1_N: Mono-functional DNA-alkylating methyl meth | 89.41 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 89.37 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 89.07 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 88.68 | |
| COG3292 | 671 | Predicted periplasmic ligand-binding sensor domain | 88.64 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 88.59 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 88.23 | |
| KOG2247|consensus | 615 | 87.86 | ||
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 87.85 | |
| PF10395 | 670 | Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an | 87.83 | |
| KOG4460|consensus | 741 | 86.63 | ||
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 84.81 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 84.37 | |
| PF03022 | 287 | MRJP: Major royal jelly protein; InterPro: IPR0035 | 83.74 | |
| KOG1900|consensus | 1311 | 83.49 | ||
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 82.62 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 82.23 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 82.12 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 81.8 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 81.29 | |
| KOG1983|consensus | 993 | 81.29 | ||
| KOG1900|consensus | 1311 | 80.69 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-51 Score=370.75 Aligned_cols=330 Identities=19% Similarity=0.279 Sum_probs=286.2
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
.-.++.||...|++..|.|.... | .++++|.++++|| ..+-.+.++.++|...|.|++|+|||+.||+|+.||
T Consensus 107 CssS~~GH~e~Vl~~~fsp~g~~----l-~tGsGD~TvR~WD--~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg 179 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFSPTGSR----L-VTGSGDTTVRLWD--LDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDG 179 (480)
T ss_pred eccccCCCCCcEEEEEecCCCce----E-EecCCCceEEeec--cCCCCcceeecCCccEEEEEEECCCcchhhccccCC
Confidence 44567899887888888773321 3 3899999999999 778889999999999999999999999999999999
Q ss_pred eEEEEECCCCeee-eEecCCCCceeEEEEecCC---CeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCC
Q psy6127 244 QIIIYDCEQGTSK-NTINSKKYGVDLIKFTHSK---TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD 319 (515)
Q Consensus 244 ~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~---~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 319 (515)
+|++||.++|+++ ..+.+|...|++++|.|-. ..-.+++++.||+++|||+..++++..+.+|+.+|+|++|-.+
T Consensus 180 ~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~- 258 (480)
T KOG0271|consen 180 SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE- 258 (480)
T ss_pred eEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-
Confidence 9999999988765 6789999999999998732 1224455578999999999999999999999999999999753
Q ss_pred CEEEEEeCCCcEEEEEcCCCCeEEEEec-CCCeeEEEEC-----------CCCC-------------------------E
Q psy6127 320 DSFISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYD-----------PEGL-------------------------A 362 (515)
Q Consensus 320 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s-----------~~~~-------------------------~ 362 (515)
.++++|+.|++|++|+...|.+...+.. .+.++.++.+ |.++ .
T Consensus 259 gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~er 338 (480)
T KOG0271|consen 259 GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGER 338 (480)
T ss_pred ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcce
Confidence 3899999999999999999988887743 3446666544 4343 4
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCC
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
+++|+.|.++.+|+-.... +++....+|...|+.+.||||++++++++-|+.|++||.++|+.+.++.+|...
T Consensus 339 lVSgsDd~tlflW~p~~~k----kpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~--- 411 (480)
T KOG0271|consen 339 LVSGSDDFTLFLWNPFKSK----KPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAA--- 411 (480)
T ss_pred eEEecCCceEEEecccccc----cchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccce---
Confidence 9999999999999976543 244445688889999999999999999999999999999999999999986655
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
|..++|+.|.++|++|+.|.++++|++++.++...+++ |.+.|.++.|+|||..+++|+.| +++|.
T Consensus 412 VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpG-h~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 412 VYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPG-HADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred eEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCC-CCceEEEEEecCCCceeecCCCceEEEeec
Confidence 99999999999999999999999999999999999999 99999999999999999999987 88985
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-47 Score=342.37 Aligned_cols=291 Identities=19% Similarity=0.328 Sum_probs=258.4
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
..+|...+.||.++|.|++|+|+|+.||+|+.|.++|+||+.+..+..+.++|...|.|++|+|||+.++.+ +.||+|
T Consensus 104 vtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG--~~dg~I 181 (480)
T KOG0271|consen 104 VTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASG--SKDGSI 181 (480)
T ss_pred cceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcc--ccCCeE
Confidence 356778899999999999999999999999999999999999999999999999999999999999987755 589999
Q ss_pred EEEECCCCeee-EEecCCCCCeEEEEEcC-----CCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCE
Q psy6127 290 RYLSLHDNKYV-RYFPGHVRKVSSLNLSP-----VDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 290 ~vwd~~~~~~~-~~~~~h~~~v~~l~~~~-----~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~ 362 (515)
++||.++|+++ ..+.+|...|++++|.| .+++|++++.||.|+|||+..+.++..+ .|..+++|+.|--+| +
T Consensus 182 ~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-l 260 (480)
T KOG0271|consen 182 RLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-L 260 (480)
T ss_pred EEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-e
Confidence 99999998776 67899999999999976 5679999999999999999999999888 455679999997555 8
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEc-----------CCCC-----------------------
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFS-----------PDGK----------------------- 408 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~s-----------p~~~----------------------- 408 (515)
+++|+.|++|++|+...+. ......+|...|+.++.+ |.++
T Consensus 261 iySgS~DrtIkvw~a~dG~-----~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~ 335 (480)
T KOG0271|consen 261 IYSGSQDRTIKVWRALDGK-----LCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDS 335 (480)
T ss_pred EEecCCCceEEEEEccchh-----HHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccC
Confidence 9999999999999988754 555567888888888776 3233
Q ss_pred --EEEEEECCCcEEEEECCCC-ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCC
Q psy6127 409 --LILVSTNGSIIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA 485 (515)
Q Consensus 409 --~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 485 (515)
.+++|+.|.++.+|+.... +++..+.+|... |+.+.||||++++|+++.|..|++||..+|+.+.++++ |-++
T Consensus 336 ~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~l---Vn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRG-Hv~~ 411 (480)
T KOG0271|consen 336 GERLVSGSDDFTLFLWNPFKSKKPITRMTGHQAL---VNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRG-HVAA 411 (480)
T ss_pred cceeEEecCCceEEEecccccccchhhhhchhhh---eeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhh-ccce
Confidence 4999999999999997544 466666666554 99999999999999999999999999999999999999 9999
Q ss_pred eEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 486 VQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 486 V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
|+.++|+.|.++|++|+.| +++|++..
T Consensus 412 VYqvawsaDsRLlVS~SkDsTLKvw~V~t 440 (480)
T KOG0271|consen 412 VYQVAWSADSRLLVSGSKDSTLKVWDVRT 440 (480)
T ss_pred eEEEEeccCccEEEEcCCCceEEEEEeee
Confidence 9999999999999999976 99999865
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-46 Score=341.25 Aligned_cols=283 Identities=20% Similarity=0.312 Sum_probs=262.4
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
-|-+.+|..+.|++|++.|||||.+|.+++|+..+...+.++.+|...+.++.|+|..+.+-+++++.||++++|++++.
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e 251 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE 251 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence 36688999999999999999999999999999999999999999999999999999854444555568999999999999
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
.++..+.+|...|..++|+|+|++|+|++.|.+-++||++++..+... .|...+.+++|.|||..+++|+.|..-+|||
T Consensus 252 ~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWD 331 (459)
T KOG0272|consen 252 TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWD 331 (459)
T ss_pred cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheee
Confidence 999999999999999999999999999999999999999998766554 5566799999999999999999999999999
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec-CCCEE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP-DSQFV 455 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l 455 (515)
+++++ ++....+|..+|.+++|+|+|..+++|+.|++++|||++..+.+.++..|.+. |+.+.|+| .|.+|
T Consensus 332 lRtgr-----~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl---VS~Vk~~p~~g~fL 403 (459)
T KOG0272|consen 332 LRTGR-----CIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL---VSQVKYSPQEGYFL 403 (459)
T ss_pred cccCc-----EEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccch---hhheEecccCCeEE
Confidence 99987 66666779999999999999999999999999999999999999999887766 89999999 78999
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 456 ASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 456 ~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
++++.|++++||...++.++..+.+ |.+.|.++..+||+.++++++.| +++|.
T Consensus 404 ~TasyD~t~kiWs~~~~~~~ksLaG-He~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 404 VTASYDNTVKIWSTRTWSPLKSLAG-HEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEcccCcceeeecCCCcccchhhcC-CccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999999999999999999999999 99999999999999999999866 99996
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=302.85 Aligned_cols=288 Identities=21% Similarity=0.361 Sum_probs=263.5
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
+..++|+||.+.|.++.|++|+++++++|.||.+.|||.-+....+.++.....|..++|+|.++.++++ +.|+...|
T Consensus 46 ~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcG--GLdN~Csi 123 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACG--GLDNKCSI 123 (343)
T ss_pred eeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEec--CcCceeEE
Confidence 4448899999999999999999999999999999999999999999999999999999999999866544 58999999
Q ss_pred EECCCC------eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECC-CCCEE
Q psy6127 292 LSLHDN------KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDP-EGLAF 363 (515)
Q Consensus 292 wd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~-~~~~l 363 (515)
|++.+. +..+.+.+|++.+.++.|.+ ...|+++|.|.++.+||+++++.+..+. |.+.+.+++++| +++.+
T Consensus 124 y~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntF 202 (343)
T KOG0286|consen 124 YPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTF 202 (343)
T ss_pred EecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeE
Confidence 999865 34567899999999999998 5568999999999999999999999984 556799999999 99999
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCC
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP 443 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 443 (515)
++|+.|+..++||+|.+. ..+...+|.+.|++++|.|+|.-+++|++|++.++||++..+.+..+. +.....+|
T Consensus 203 vSg~cD~~aklWD~R~~~-----c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys-~~~~~~gi 276 (343)
T KOG0286|consen 203 VSGGCDKSAKLWDVRSGQ-----CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYS-HDSIICGI 276 (343)
T ss_pred EecccccceeeeeccCcc-----eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeec-cCcccCCc
Confidence 999999999999999975 667778999999999999999999999999999999999999888887 44556679
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 444 LEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
++++||..|++|++|..|..+.+||.-.++.+..+.+ |.+.|.++..+|||..+++|+-| +|||.
T Consensus 277 tSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~G-HeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 277 TSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAG-HENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eeEEEcccccEEEeeecCCceeEeeccccceEEEeec-cCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 9999999999999999999999999999999999998 99999999999999999999966 99994
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=324.23 Aligned_cols=264 Identities=21% Similarity=0.327 Sum_probs=246.6
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEE
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSD--GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd--~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 270 (515)
.+++-++.+++|. ......+++|+||+..|.++.|+|. +..+|||+.||++++|++.+..++..+.+|...|..++
T Consensus 191 aT~swsG~~kvW~--~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~Va 268 (459)
T KOG0272|consen 191 ATGSWSGLVKVWS--VPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVA 268 (459)
T ss_pred EEeecCCceeEee--cCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeee
Confidence 4788899999999 8888999999999999999999996 67899999999999999999999999999999999999
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCC
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSG 349 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~ 349 (515)
|+|+|+++.+++ .|.+-++||++++..+....||...|.+++|+|||.++++|+.|..-+|||++++.++..+. |..
T Consensus 269 fHPsG~~L~Tas--fD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k 346 (459)
T KOG0272|consen 269 FHPSGKFLGTAS--FDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK 346 (459)
T ss_pred ecCCCceeeecc--cccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEeccccc
Confidence 999999888775 89999999999999998899999999999999999999999999999999999999999884 456
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCc
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
.+..++|+|+|..+|+|+.|++++|||++... .+.....|...|+.++|+| .|.+|++++.|+++++|...++.
T Consensus 347 ~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~-----~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~ 421 (459)
T KOG0272|consen 347 EILSVAFSPNGYHLATGSSDNTCKVWDLRMRS-----ELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWS 421 (459)
T ss_pred ceeeEeECCCceEEeecCCCCcEEEeeecccc-----cceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcc
Confidence 79999999999999999999999999999865 4555678899999999999 78899999999999999999999
Q ss_pred eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
+++.+.+|.+. |.++.++||++++++++.|.++++|.
T Consensus 422 ~~ksLaGHe~k---V~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 422 PLKSLAGHEGK---VISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred cchhhcCCccc---eEEEEeccCCceEEEeccCceeeecc
Confidence 99999997665 99999999999999999999999995
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=310.72 Aligned_cols=386 Identities=20% Similarity=0.312 Sum_probs=305.6
Q ss_pred CCCCc-eeeeeeccceEEeCCcceeeeehhhhHhhhhhhhhh---------hhheeecccccccccccCCCCcCCCcchh
Q psy6127 91 PNISS-LEIKRIDTEEIVLNPSCLIKLKEIKCMLAQKAVPKI---------LKIVAKSENMCNLTKLDLPYNKLGSWDFE 160 (515)
Q Consensus 91 ~~~~~-l~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~la~~~~~~~i~~~~~~~n~~~~wd~~ 160 (515)
-|.+. +.||.....+..|++.- +.+.+++ .++.|.|+..++.- +++-..
T Consensus 77 GD~sG~vRIWdtt~~~hiLKnef------------~v~aG~I~Di~Wd~ds~RI~avGEGrerfg---------~~F~~D 135 (603)
T KOG0318|consen 77 GDVSGKVRIWDTTQKEHILKNEF------------QVLAGPIKDISWDFDSKRIAAVGEGRERFG---------HVFLWD 135 (603)
T ss_pred cCCcCcEEEEeccCcceeeeeee------------eecccccccceeCCCCcEEEEEecCcccee---------EEEEec
Confidence 35555 56898888665553322 1121332 27778877776541 333344
Q ss_pred hccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe
Q psy6127 161 LLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS 240 (515)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs 240 (515)
+|..+..+.||.-.+.++.|-+..+-- + .++++|..+...+ -++++...+++.|..-|.|+.|+|||.++|+++
T Consensus 136 SG~SvGei~GhSr~ins~~~KpsRPfR---i-~T~sdDn~v~ffe--GPPFKFk~s~r~HskFV~~VRysPDG~~Fat~g 209 (603)
T KOG0318|consen 136 SGNSVGEITGHSRRINSVDFKPSRPFR---I-ATGSDDNTVAFFE--GPPFKFKSSFREHSKFVNCVRYSPDGSRFATAG 209 (603)
T ss_pred CCCccceeeccceeEeeeeccCCCceE---E-EeccCCCeEEEee--CCCeeeeecccccccceeeEEECCCCCeEEEec
Confidence 588888999998888887776544322 3 3899999999998 678999999999999999999999999999999
Q ss_pred CCCeEEEEECCCCeeeeEec---CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE---------------
Q psy6127 241 DDDQIIIYDCEQGTSKNTIN---SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY--------------- 302 (515)
Q Consensus 241 ~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~--------------- 302 (515)
.||++.+||-.+|+.+..+. +|.+.|.+++|+||+..+++++ .|.++++||+.+++++++
T Consensus 210 sDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~S--aDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~l 287 (603)
T KOG0318|consen 210 SDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVS--ADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCL 287 (603)
T ss_pred CCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEec--CCceEEEEEeeccceEEEeecCCchhceEEEEE
Confidence 99999999999999999998 8999999999999999999887 599999999987765333
Q ss_pred ----------------------------ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE----------
Q psy6127 303 ----------------------------FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM---------- 344 (515)
Q Consensus 303 ----------------------------~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---------- 344 (515)
+.||...|+++..+|++++|++|+.||.|.-||..++..-+.
T Consensus 288 Wqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~ 367 (603)
T KOG0318|consen 288 WQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIK 367 (603)
T ss_pred EeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEE
Confidence 348999999999999999999999999999999854321100
Q ss_pred ---------------------E---------------------------------------------------ecCCCee
Q psy6127 345 ---------------------I---------------------------------------------------QLSGNKP 352 (515)
Q Consensus 345 ---------------------~---------------------------------------------------~~~~~~~ 352 (515)
+ ...-...
T Consensus 368 ~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s 447 (603)
T KOG0318|consen 368 GMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESS 447 (603)
T ss_pred EEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccc
Confidence 0 0011234
Q ss_pred EEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE
Q psy6127 353 IAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
+++++|+++.+++|+.|+.+++|.+...... .......|..+|+.+++|||+.||+++...+.+.+||+.+.+....
T Consensus 448 ~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~---ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~ 524 (603)
T KOG0318|consen 448 AVAVSPDGSEVAVGGQDGKVHVYSLSGDELK---EEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTN 524 (603)
T ss_pred eEEEcCCCCEEEEecccceEEEEEecCCccc---ceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecc
Confidence 5788999999999999999999999875432 2223457888999999999999999999999999999998876322
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
.- .-|...|.+++|+|+..++|+|+-|-.|.||+++.......++++|...|+.+.|-.+.. +++++.| +++|.+
T Consensus 525 ~w--~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wlde~t-vvSsG~Da~iK~W~v 601 (603)
T KOG0318|consen 525 RW--AFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLDEST-VVSSGQDANIKVWNV 601 (603)
T ss_pred ee--eeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEEecCce-EEeccCcceeEEecc
Confidence 22 224555999999999999999999999999999887666777778999999999988755 5555544 999987
Q ss_pred C
Q psy6127 511 T 511 (515)
Q Consensus 511 ~ 511 (515)
.
T Consensus 602 ~ 602 (603)
T KOG0318|consen 602 T 602 (603)
T ss_pred c
Confidence 5
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=291.92 Aligned_cols=303 Identities=58% Similarity=0.978 Sum_probs=282.5
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
.+++.+.|+.-.+.|+++.|+++|.+|++++.|.+++|||..+++..+++..+...+..++|......++.++...|.+|
T Consensus 3 s~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 3 SFRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred ccccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCce
Confidence 45666778888899999999999999999999999999999999999999999999999999999988888886779999
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
+..++.+++.++.|.||...|++++.+|-+..+++++.|++|++||++..++...+.... .+.++|+|+|-++|++...
T Consensus 83 ryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~~ 161 (311)
T KOG1446|consen 83 RYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANGS 161 (311)
T ss_pred EEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecCC
Confidence 999999999999999999999999999999999999999999999999999988887766 7789999999999999988
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
..|++||+|...+.|...+.........++.+.|||||++++.++..+.+++.|.-+|.....+..+.....-....+|+
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ft 241 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFT 241 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEEC
Confidence 89999999999999998888877788899999999999999999999999999999999999999888766556789999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcCCCC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~~~~ 513 (515)
||++++++|+.||+|.+|++++|+.+..+.+.+.+++.++.|+|...++++++..+.+|-++..
T Consensus 242 Pds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~~ 305 (311)
T KOG1446|consen 242 PDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLPDED 305 (311)
T ss_pred CCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCceEEEEecccc
Confidence 9999999999999999999999999999998789999999999999999999999999988754
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=286.61 Aligned_cols=290 Identities=20% Similarity=0.281 Sum_probs=248.8
Q ss_pred eEeeeeccccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECC-----CCeeeeEecCCCCceeEEEEecCCCeEEEEEee
Q psy6127 211 YRVAKVFRENTDKINSLDYSSD-GSLLISCSDDDQIIIYDCE-----QGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK 284 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd-~~~lasgs~dg~i~iwd~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~ 284 (515)
.....++++|++.|+.++..+. ...+++++.|.++.+|++. .|.+.+.+.+|+..|..+..++++++.+.++
T Consensus 5 l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s-- 82 (315)
T KOG0279|consen 5 LVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS-- 82 (315)
T ss_pred heeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc--
Confidence 3455789999999999999986 5789999999999999875 4677889999999999999999999877665
Q ss_pred CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec--CCCeeEEEECCC--C
Q psy6127 285 VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL--SGNKPIAAYDPE--G 360 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~s~~--~ 360 (515)
.|+++++||+.+++..+.|.+|...|.+++|+||++.+++|+.|.+|++|++........... .+-+.++.|+|+ .
T Consensus 83 wD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 83 WDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred ccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCC
Confidence 899999999999999999999999999999999999999999999999999876554444433 455899999998 6
Q ss_pred CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC
Q psy6127 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 361 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
.+|++++.|+++++||+++.+ ......+|.+.++.+++||||...++|+.||.+.+||++.++++..+.. .
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~-----l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a----~ 233 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQ-----LRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEA----F 233 (315)
T ss_pred cEEEEccCCceEEEEccCCcc-----hhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccC----C
Confidence 889999999999999999865 4444567899999999999999999999999999999999999888774 3
Q ss_pred CCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCC--------CCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 441 ASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHP--------SAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~--------~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
..|.+++|+|+.-+|+.+. +..|+|||++++.++..+..... ....+++|++||..|.++..+ +++|.+
T Consensus 234 ~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv 312 (315)
T KOG0279|consen 234 DIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQV 312 (315)
T ss_pred CeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEe
Confidence 3499999999987777765 44599999999988877754221 224678999999999999765 999987
Q ss_pred CC
Q psy6127 511 TL 512 (515)
Q Consensus 511 ~~ 512 (515)
..
T Consensus 313 ~~ 314 (315)
T KOG0279|consen 313 AK 314 (315)
T ss_pred ec
Confidence 53
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=282.99 Aligned_cols=273 Identities=23% Similarity=0.350 Sum_probs=239.6
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe--eeEEecCCCCCeE
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVS 311 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~--~~~~~~~h~~~v~ 311 (515)
-+|+++|.|.+||+|...+|.+.++++-....|+.+...|++..++.++ ...|++||++++. ++.++.+|+..|+
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~---~qhvRlyD~~S~np~Pv~t~e~h~kNVt 87 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG---NQHVRLYDLNSNNPNPVATFEGHTKNVT 87 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc---CCeeEEEEccCCCCCceeEEeccCCceE
Confidence 4899999999999999999999999999899999999999999888775 8899999998875 5899999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC
Q psy6127 312 SLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~ 391 (515)
++.|..+|+.+++||+||+++|||++...+.+.+.+..+++++..+|+...|++|..+|.|++||+..... .-...
T Consensus 88 aVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c----~~~li 163 (311)
T KOG0315|consen 88 AVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSC----THELI 163 (311)
T ss_pred EEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcc----ccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987531 11112
Q ss_pred CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce---eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC---VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 392 ~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
......|.++...|||.+++.+...|..++|++-+.+. +..+.....+...+..+.+|||+++||+++.|.+++||+
T Consensus 164 Pe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn 243 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWN 243 (311)
T ss_pred CCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEe
Confidence 23446889999999999999999999999999876532 222222333445599999999999999999999999999
Q ss_pred CCCC-eEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCCC
Q psy6127 469 AERG-YKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 469 ~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~ 514 (515)
.++- +....+.+ |...+++.+||.||.||++|+.| .++|+++...
T Consensus 244 ~~~~~kle~~l~g-h~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 244 TDDFFKLELVLTG-HQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred cCCceeeEEEeec-CCceEEeeeeccCccEEEecCCCCceeecccccCc
Confidence 9887 66677777 99999999999999999999976 9999998764
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=323.08 Aligned_cols=351 Identities=19% Similarity=0.275 Sum_probs=295.0
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee-
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY- 211 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~- 211 (515)
-++|+|+.++.+ ++||+..+..++.|+||..++.++.|.+..... +.+++..|..+++|+ ....
T Consensus 118 ~LlAtggaD~~v----------~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~---lL~sg~~D~~v~vwn--l~~~~ 182 (775)
T KOG0319|consen 118 TLLATGGADGRV----------KVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRW---LLASGATDGTVRVWN--LNDKR 182 (775)
T ss_pred ceEEeccccceE----------EEEEeeCCEEEEEecCCCceEEEEEeCCccchh---heeecCCCceEEEEE--cccCc
Confidence 678888888888 999999999999999999999999999887664 566999999999999 4422
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE---------------------------------
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT--------------------------------- 258 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~--------------------------------- 258 (515)
.|+++++.|.+.|++++|++|+.-+++++.|..+.+||+.+.+..++
T Consensus 183 tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~ 262 (775)
T KOG0319|consen 183 TCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVV 262 (775)
T ss_pred hHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceE
Confidence 36899999999999999999999999999999999998743211110
Q ss_pred --------------------------------------------------------------------------------
Q psy6127 259 -------------------------------------------------------------------------------- 258 (515)
Q Consensus 259 -------------------------------------------------------------------------------- 258 (515)
T Consensus 263 ~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVA 342 (775)
T KOG0319|consen 263 QYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVA 342 (775)
T ss_pred EEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEE
Confidence
Q ss_pred ------------------ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe----eeEEecCCCCCeEEEEEc
Q psy6127 259 ------------------INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK----YVRYFPGHVRKVSSLNLS 316 (515)
Q Consensus 259 ------------------~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~----~~~~~~~h~~~v~~l~~~ 316 (515)
+.+|+..|.++....+| .++++++.|.++++|.++++. ++....+|.+.|.+++++
T Consensus 343 TNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g--~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~ 420 (775)
T KOG0319|consen 343 TNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSG--DLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGS 420 (775)
T ss_pred eCCCceEEEecCCCceEEEeCchhheeeeeecccC--cEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeec
Confidence 23455555666544444 344556699999999874442 456678999999999997
Q ss_pred CCCC-EEEEEeCCCcEEEEEcCCCCeE---EE-------EecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 317 PVDD-SFISGSYDKTVRVWDLRQPNNV---GM-------IQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 317 ~~~~-~l~s~s~dg~i~iwd~~~~~~~---~~-------~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
..+. +|+++|.|+++++|++...+.. .. ..|...+++++++|+.+++++|+.|.+.++|++....
T Consensus 421 ~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~---- 496 (775)
T KOG0319|consen 421 KLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR---- 496 (775)
T ss_pred ccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCce----
Confidence 7654 8999999999999999862211 11 1455679999999999999999999999999998543
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
......+|...+.++.|+|..+.++++|.|++|+||.+.+..|++++.+|... |..+.|-.+|+.|++++.||.++
T Consensus 497 -l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~a---Vlra~F~~~~~qliS~~adGliK 572 (775)
T KOG0319|consen 497 -LLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSA---VLRASFIRNGKQLISAGADGLIK 572 (775)
T ss_pred -EEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccce---eEeeeeeeCCcEEEeccCCCcEE
Confidence 55567789999999999999999999999999999999999999999997665 99999999999999999999999
Q ss_pred EEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 466 iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
+|++++++|+.++.. |.+.|++++-+|...++++|++| +.+|.
T Consensus 573 lWnikt~eC~~tlD~-H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 573 LWNIKTNECEMTLDA-HNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred EEeccchhhhhhhhh-ccceeEEEeecCccceeEecCCCeEEEEee
Confidence 999999999999998 99999999999999999999988 55564
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=314.24 Aligned_cols=358 Identities=19% Similarity=0.262 Sum_probs=295.2
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccC-CceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLES-PHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY 211 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~ 211 (515)
++|.+..+..-+ ++|+..+++.+.+++. |..++..+.|+|... +..+++-|+.+++|| +...
T Consensus 75 ~~L~~a~rs~ll----------rv~~L~tgk~irswKa~He~Pvi~ma~~~~g~-----LlAtggaD~~v~VWd--i~~~ 137 (775)
T KOG0319|consen 75 EVLVTASRSQLL----------RVWSLPTGKLIRSWKAIHEAPVITMAFDPTGT-----LLATGGADGRVKVWD--IKNG 137 (775)
T ss_pred cEEEEeeccceE----------EEEEcccchHhHhHhhccCCCeEEEEEcCCCc-----eEEeccccceEEEEE--eeCC
Confidence 566666666666 9999999999999998 666677777776651 555899999999999 9999
Q ss_pred EeeeeccccCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCe-eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGS--LLISCSDDDQIIIYDCEQGT-SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~--~lasgs~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
.+.+.|+||.+.|.++.|+|+-. .|++|..|+++++||+.+.. ++.++..|...|++++|.+++..++.++ .|..
T Consensus 138 ~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~--RDkv 215 (775)
T KOG0319|consen 138 YCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVG--RDKV 215 (775)
T ss_pred EEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEec--cCcE
Confidence 99999999999999999999764 58999999999999999554 4888899999999999999987766554 5666
Q ss_pred EEEEECCC----------------------------------------------Cee-----------------------
Q psy6127 289 LRYLSLHD----------------------------------------------NKY----------------------- 299 (515)
Q Consensus 289 v~vwd~~~----------------------------------------------~~~----------------------- 299 (515)
+.+||+.+ +++
T Consensus 216 i~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~ 295 (775)
T KOG0319|consen 216 IIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQ 295 (775)
T ss_pred EEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCc
Confidence 77766532 110
Q ss_pred --------------------------------------------------------------eEEecCCCCCeEEEEEcC
Q psy6127 300 --------------------------------------------------------------VRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 300 --------------------------------------------------------------~~~~~~h~~~v~~l~~~~ 317 (515)
-..+.||+..|.++....
T Consensus 296 ~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~ 375 (775)
T KOG0319|consen 296 LLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWS 375 (775)
T ss_pred eEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecc
Confidence 011237888899998666
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCeEEE----E-ecCCCeeEEEECCCC-CEEEEEECCCcEEEEEeecCCCCCcee-e--
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPNNVGM----I-QLSGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPFAS-F-- 388 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~~~~~----~-~~~~~~~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~-~-- 388 (515)
+|.+|++|+.|.++++|.++.+..... . .|...+.+++++..+ .+|++++.|+++++|++...+...... +
T Consensus 376 ~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~ 455 (775)
T KOG0319|consen 376 SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTC 455 (775)
T ss_pred cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehh
Confidence 678999999999999998855443222 1 455668888887654 678999999999999998732211111 1
Q ss_pred -ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 389 -KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 389 -~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
.....|...|++++.+|+.+.+++|+.|++.++|+++......++.+|... ++++.|+|..+.++++|.|++|+||
T Consensus 456 ~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RG---vw~V~Fs~~dq~laT~SgD~TvKIW 532 (775)
T KOG0319|consen 456 RYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRG---VWCVSFSKNDQLLATCSGDKTVKIW 532 (775)
T ss_pred hHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccc---eEEEEeccccceeEeccCCceEEEE
Confidence 124578889999999999999999999999999999999999999987665 9999999999999999999999999
Q ss_pred ECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 468 NAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 468 d~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
.+.+..++.++.+ |...|..+.|-.++..|++++.| +++|+++..
T Consensus 533 ~is~fSClkT~eG-H~~aVlra~F~~~~~qliS~~adGliKlWnikt~ 579 (775)
T KOG0319|consen 533 SISTFSCLKTFEG-HTSAVLRASFIRNGKQLISAGADGLIKLWNIKTN 579 (775)
T ss_pred EeccceeeeeecC-ccceeEeeeeeeCCcEEEeccCCCcEEEEeccch
Confidence 9999999999999 99999999999999999999866 999999865
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=277.92 Aligned_cols=296 Identities=20% Similarity=0.222 Sum_probs=244.3
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccc---eeeeeEeeeeccccCCcEEEEEEcCCCCEEEE
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSEN---LVRSYRVAKVFRENTDKINSLDYSSDGSLLIS 238 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~---~~~~~~~~~~~~~h~~~I~~l~~spd~~~las 238 (515)
.....++++|...|..++....... +..+++.|..+.+|+- ..+.+.+++.|+||+..|..+..++||++.++
T Consensus 5 l~l~~tl~gh~d~Vt~la~~~~~~~----~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS 80 (315)
T KOG0279|consen 5 LVLRGTLEGHTDWVTALAIKIKNSD----ILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALS 80 (315)
T ss_pred heeeeeecCCCceEEEEEeecCCCc----eEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEe
Confidence 4456688999776666666555322 3348888999999863 24566778999999999999999999999999
Q ss_pred EeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC-CCCCeEEEEEcC
Q psy6127 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG-HVRKVSSLNLSP 317 (515)
Q Consensus 239 gs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~-h~~~v~~l~~~~ 317 (515)
+|.|+++++||+.+++..+.|.+|...|.+++|+++...++.+ +.|.++++||...+........ |.+.|+|+.|+|
T Consensus 81 ~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSG--SrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 81 ASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSG--SRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred ccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecC--CCcceeeeeeecccEEEEEecCCCcCcEEEEEEcC
Confidence 9999999999999999999999999999999999999988765 5899999999876554443333 388999999999
Q ss_pred C--CCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCC
Q psy6127 318 V--DDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGER 394 (515)
Q Consensus 318 ~--~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 394 (515)
+ ...|++++.|++|++||+++-+....+ .+.+.++.+++||||...++|+.||.+.+||++..+ .+.. ..+
T Consensus 159 ~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k-----~lys-l~a 232 (315)
T KOG0279|consen 159 NESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGK-----NLYS-LEA 232 (315)
T ss_pred CCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCc-----eeEe-ccC
Confidence 8 679999999999999999998888777 455668999999999999999999999999999866 3322 356
Q ss_pred CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccC------CCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN------NASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~------~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
...|.+++|+|+..+|+.+. +..|+|||+.++.++..+...... .....+++|++||..|++|-.|+.|++|.
T Consensus 233 ~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 233 FDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred CCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEE
Confidence 77899999999976665554 456999999999887766532211 22357789999999999999999999998
Q ss_pred CC
Q psy6127 469 AE 470 (515)
Q Consensus 469 ~~ 470 (515)
+.
T Consensus 312 v~ 313 (315)
T KOG0279|consen 312 VA 313 (315)
T ss_pred ee
Confidence 74
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=272.06 Aligned_cols=292 Identities=16% Similarity=0.265 Sum_probs=254.4
Q ss_pred eeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--eeeEecCCCCceeE
Q psy6127 191 LAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT--SKNTINSKKYGVDL 268 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~ 268 (515)
+..+++-|.+|++|. ..++.|.++++...+.|+.+...||++.||+|+. ..||+||+.++. ++.++.+|...|++
T Consensus 12 iLvsA~YDhTIRfWq--a~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVta 88 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQ--ALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTA 88 (311)
T ss_pred EEEeccCcceeeeee--hhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEE
Confidence 444899999999999 9999999999999999999999999999999986 579999999765 58899999999999
Q ss_pred EEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe--
Q psy6127 269 IKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-- 346 (515)
Q Consensus 269 ~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-- 346 (515)
+.|..+|..++++ ++||+++|||++...+.+.++ |.++|+++..+|+...|++|..+|.|++||+....+...+-
T Consensus 89 VgF~~dgrWMyTg--seDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe 165 (311)
T KOG0315|consen 89 VGFQCDGRWMYTG--SEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPE 165 (311)
T ss_pred EEEeecCeEEEec--CCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCC
Confidence 9999999988765 489999999999977767665 78999999999999999999999999999999987777663
Q ss_pred cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCC-CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy6127 347 LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDK-GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF 425 (515)
Q Consensus 347 ~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~ 425 (515)
....+.++.+.|||.+++.+...|..++|++-.... .++..+.....|.+.+..+.+|||+++|++++.|.+++||+.+
T Consensus 166 ~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~ 245 (311)
T KOG0315|consen 166 DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTD 245 (311)
T ss_pred CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecC
Confidence 334588999999999999999999999999977432 2334444567888899999999999999999999999999998
Q ss_pred CC-ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEEC
Q psy6127 426 NG-NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 426 ~~-~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 492 (515)
+. +....+.+| ...++.++||.||+||++|+.|+.+++|++..++.++...+ |.....|++.+
T Consensus 246 ~~~kle~~l~gh---~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g-h~K~~vc~~ln 309 (311)
T KOG0315|consen 246 DFFKLELVLTGH---QRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG-HHKAAVCVALN 309 (311)
T ss_pred CceeeEEEeecC---CceEEeeeeccCccEEEecCCCCceeecccccCceeeecCC-cccccEEEEee
Confidence 87 555556654 45599999999999999999999999999999999999998 66666666643
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=278.79 Aligned_cols=288 Identities=22% Similarity=0.314 Sum_probs=251.9
Q ss_pred cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCe
Q psy6127 165 LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQ 244 (515)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~ 244 (515)
-++++||...|+++.+.+... ...|++.|+.+.+|| .-+....+.++-....|..++|+|.|+++|+|+.|+.
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr-----~ivSaSqDGklIvWD--s~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~ 120 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSR-----RIVSASQDGKLIVWD--SFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNK 120 (343)
T ss_pred EEEecccccceeeeEecCCcC-----eEEeeccCCeEEEEE--cccccceeEEecCceeEEEEEECCCCCeEEecCcCce
Confidence 368899988888887776554 334788899999999 4455555667777899999999999999999999999
Q ss_pred EEEEECCCC------eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC-
Q psy6127 245 IIIYDCEQG------TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP- 317 (515)
Q Consensus 245 i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~- 317 (515)
..||++.+. ...+.+.+|++-+.|+.|.+|+ .+++++ .|.+..+||+++++.+..|.+|.+.|.+++++|
T Consensus 121 Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~S--GD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~ 197 (343)
T KOG0286|consen 121 CSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGS--GDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPS 197 (343)
T ss_pred eEEEecccccccccceeeeeecCccceeEEEEEcCCC-ceEecC--CCceEEEEEcccceEEEEecCCcccEEEEecCCC
Confidence 999999855 3456789999999999999855 566665 599999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
+++.+++|+.|+..++||++.+.+++.|. +...++++.|.|+|.-|++|+.|++.++||+|..+.. ..........
T Consensus 198 ~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~---a~ys~~~~~~ 274 (343)
T KOG0286|consen 198 DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL---AVYSHDSIIC 274 (343)
T ss_pred CCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE---eeeccCcccC
Confidence 89999999999999999999999999994 4566999999999999999999999999999986521 1222445567
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
+|++++||..|++|++|..|..+.+||.-.++.+..+.+|.+. |.++..+|||.-+++|+.|..++||.
T Consensus 275 gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNR---vScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 275 GITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENR---VSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCe---eEEEEECCCCcEEEecchhHheeecC
Confidence 8999999999999999999999999999999999999987665 99999999999999999999999994
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=281.69 Aligned_cols=290 Identities=21% Similarity=0.350 Sum_probs=257.3
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE-QGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.++..+.||++.|+.+.|+|+|.+||||+.|..|.+|++. ..+-...+++|.+.|..+.|.++++.++.++ .|.+++
T Consensus 38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~g--tDk~v~ 115 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCG--TDKTVR 115 (338)
T ss_pred chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEec--CCceEE
Confidence 3445688999999999999999999999999999999965 3455677899999999999999999988776 699999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
.||+++|+.++.+++|.+-|+++.-..-|. ++.+++.|+++++||+++.+.++++.......++.|..++..+.+|+-|
T Consensus 116 ~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggId 195 (338)
T KOG0265|consen 116 GWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGID 195 (338)
T ss_pred EEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeecccc
Confidence 999999999999999999999999555555 6778899999999999999999999877789999999999999999999
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----ceeEEeeccccC-CCCCE
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG----NCVQSLSGVLNN-NASPL 444 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~----~~~~~~~~~~~~-~~~i~ 444 (515)
+.|++||++..+ ......+|..+|+.+..+|+|.++.+-+.|.++++||++.. .++..+.++... .....
T Consensus 196 n~ikvWd~r~~d-----~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL 270 (338)
T KOG0265|consen 196 NDIKVWDLRKND-----GLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLL 270 (338)
T ss_pred CceeeeccccCc-----ceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcc
Confidence 999999998876 66667899999999999999999999999999999999754 446666665421 22356
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEc
Q psy6127 445 EATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWI 509 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~ 509 (515)
.++|+|++..+.+|+.|..+++||......+..+++ |.+.|+++.|+|...++.+++.|-+||-
T Consensus 271 ~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpG-h~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 271 KCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPG-HYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred eeeccCCCCccccccccceEEEeecccccEEEEcCC-cceeEEEeeecCCCcEEEEeccCceeEe
Confidence 789999999999999999999999999999999999 9999999999999999999998866663
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=292.83 Aligned_cols=361 Identities=16% Similarity=0.222 Sum_probs=280.6
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCC--ceeEEEEEEeeccccceeeeeeeCCCCc---EEEEccce
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESP--HFVSLFVTFVSRVLTMAASLAHSRSSRT---ITKCSENL 207 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~s~~~~~---~i~~wd~~ 207 (515)
.++|.||..|+| |+||....+.+..-+-+ ...+..++++..... ++..+.++. .+..||
T Consensus 72 ~yiASGD~sG~v----------RIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~R----I~avGEGrerfg~~F~~D-- 135 (603)
T KOG0318|consen 72 FYIASGDVSGKV----------RIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKR----IAAVGEGRERFGHVFLWD-- 135 (603)
T ss_pred eEEeecCCcCcE----------EEEeccCcceeeeeeeeecccccccceeCCCCcE----EEEEecCccceeEEEEec--
Confidence 589999999999 99998664433322221 222444444433322 233444433 244576
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
++.-+-.+.||...|++++|-|... .++|||+|++|.+|+-..-+...+++.|..-|.|+.|+|||..+++++ .|
T Consensus 136 --SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~g--sD 211 (603)
T KOG0318|consen 136 --SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAG--SD 211 (603)
T ss_pred --CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEec--CC
Confidence 3455567899999999999999654 699999999999999887788888999999999999999999888776 69
Q ss_pred CeEEEEECCCCeeeEEec---CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-----------------
Q psy6127 287 ATLRYLSLHDNKYVRYFP---GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ----------------- 346 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~----------------- 346 (515)
|.+.+||-.+++.+..+. +|.+.|.+++|+||++.+++++.|.+++|||+.+.++++++.
T Consensus 212 gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd 291 (603)
T KOG0318|consen 212 GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKD 291 (603)
T ss_pred ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCC
Confidence 999999999999999987 899999999999999999999999999999998776665542
Q ss_pred ---------------------------cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce---------e---
Q psy6127 347 ---------------------------LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA---------S--- 387 (515)
Q Consensus 347 ---------------------------~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~---------~--- 387 (515)
|...+++++.+|++++|++|+.||.|.-|+..++...... .
T Consensus 292 ~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~ 371 (603)
T KOG0318|consen 292 HLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAA 371 (603)
T ss_pred eEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEee
Confidence 3345778899999999999999999999997653211100 0
Q ss_pred -----------------e----------------------ecC-------------------------CCCCcCeEEEEE
Q psy6127 388 -----------------F----------------------KCP-------------------------GERGCEWTGLKF 403 (515)
Q Consensus 388 -----------------~----------------------~~~-------------------------~~~~~~i~~l~~ 403 (515)
. ... ....-...++++
T Consensus 372 ~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv 451 (603)
T KOG0318|consen 372 SESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAV 451 (603)
T ss_pred cCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEE
Confidence 0 000 001112457999
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCC
Q psy6127 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHP 483 (515)
Q Consensus 404 sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 483 (515)
+|+++.+++|+.|+.+++|.+..+..... .....+..+++++++|||+.+||+|...+.+.+||+.+.+.....-.-|.
T Consensus 452 ~~~~~~vaVGG~Dgkvhvysl~g~~l~ee-~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHt 530 (603)
T KOG0318|consen 452 SPDGSEVAVGGQDGKVHVYSLSGDELKEE-AKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHT 530 (603)
T ss_pred cCCCCEEEEecccceEEEEEecCCcccce-eeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeee
Confidence 99999999999999999999987654322 12233566699999999999999999999999999999887544434499
Q ss_pred CCeEEEEECCCCCEEEEeeCC--EEEEcCCCCC
Q psy6127 484 SAVQSLQFNPKYHMLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 484 ~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~ 514 (515)
..|.+++|+|+..++|+|+-| +.||+++.+.
T Consensus 531 akI~~~aWsP~n~~vATGSlDt~Viiysv~kP~ 563 (603)
T KOG0318|consen 531 AKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA 563 (603)
T ss_pred eeEEEEEeCCCceEEEeccccceEEEEEccChh
Confidence 999999999999999999965 9999998764
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=302.97 Aligned_cols=404 Identities=17% Similarity=0.260 Sum_probs=291.9
Q ss_pred hhhHHhhcCccccCccccccCCCCcchhhHHhhhheeEeeccCCCCcccccceeeeeccCCCCceeeeeeccceEEeCCc
Q psy6127 32 TCINEILKGPIENNSVLNKSNSTNDFSVLEETAKRLMCLKLCPGNSLADESGVLNLSCFPNISSLEIKRIDTEEIVLNPS 111 (515)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~i~~~~~~~~~l~~~ 111 (515)
-+|+..++ ||+++||++.|| ++.|.++ +.|+|.|+...
T Consensus 60 g~v~n~~r-pmLqrDFi~~lP--------~~gl~hi------~e~ilsyld~~--------------------------- 97 (499)
T KOG0281|consen 60 GHINNYLK-PMLQRDFITALP--------EQGLDHI------AENILSYLDAL--------------------------- 97 (499)
T ss_pred hHHHHHHH-HHHHHHHHHhcc--------cccHHHH------HHHHHHhcchh---------------------------
Confidence 78999999 999999999999 7888888 77888777776
Q ss_pred ceeeeehhhhHhhhhhhhhh-h-hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeecccccee
Q psy6127 112 CLIKLKEIKCMLAQKAVPKI-L-KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAA 189 (515)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~-~-~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (515)
++..+++.+..|...+..+. + +++........+|...... +-|+......-...-+-.+.+......|...
T Consensus 98 sLc~celv~k~W~r~l~dg~~WKkLie~~vr~dslWrgl~e~---rqw~~~lf~~r~~~~~~~~n~f~~~l~pki~---- 170 (499)
T KOG0281|consen 98 SLCACELVCKEWKRVLSDGMLWKKLIERMVRTDSLWRGLSER---RQWDQYLFKNRPNDGGFPPNSFYRLLYPKII---- 170 (499)
T ss_pred hhhHHHHHHHHHHHHhccchHHHHHHHHhcchHHHHhhhhhc---cCcchhhccCCCCcCCcCCCcchhhhhHHHH----
Confidence 44566677777777765443 2 3332222223444433333 3344332221111000000000000001110
Q ss_pred eeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEE
Q psy6127 190 SLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLI 269 (515)
Q Consensus 190 ~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 269 (515)
.+-..+-..|...-...+.+..-....+.|.|+.+. ...+++|..|++|+|||..+..+...+.+|++.|.|+
T Consensus 171 -----~di~~idsNWr~Gr~~~~rinc~Se~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCL 243 (499)
T KOG0281|consen 171 -----QDIETIESNWRCGRHLLQRINCRSENSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCL 243 (499)
T ss_pred -----HHHhhhhcchhccceeeeeecCCcccCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEee
Confidence 111111222332111112222223467889999994 5579999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE---E-
Q psy6127 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM---I- 345 (515)
Q Consensus 270 ~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---~- 345 (515)
.|... ++.+|+.|.+|++||+++++++.++.+|...|..+.|+ +.++++++.|.++.+||+.+...+.. +
T Consensus 244 qyd~r----viisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLv 317 (499)
T KOG0281|consen 244 QYDER----VIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLV 317 (499)
T ss_pred eccce----EEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHh
Confidence 99643 55566789999999999999999999999999999999 77999999999999999987763322 1
Q ss_pred ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy6127 346 QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF 425 (515)
Q Consensus 346 ~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~ 425 (515)
.+...++.+.|+ .+++++++.|.+|++|++.+.+ ......+|...|.++.+ .++++++|+.|.+|++||+.
T Consensus 318 GHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~e-----fvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~ 388 (499)
T KOG0281|consen 318 GHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCE-----FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE 388 (499)
T ss_pred hhhhheeeeccc--cceEEEecCCceEEEEecccee-----eehhhhcccccceehhc--cCeEEEecCCCceEEEEecc
Confidence 344457777774 5699999999999999999876 66667788888877766 78899999999999999999
Q ss_pred CCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe---------EEEEEcCCCCCCeEEEEECCCCC
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY---------KVCVLDGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~---------~~~~~~~~h~~~V~~l~~sp~~~ 496 (515)
.|.+++.+++|..- |.++.|. .+.+++|+.||+|++||+..+. ++..+.. |++.|..+.|.. .
T Consensus 389 ~G~cLRvLeGHEeL---vRciRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~-hsgRVFrLQFD~--f 460 (499)
T KOG0281|consen 389 CGACLRVLEGHEEL---VRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE-HSGRVFRLQFDE--F 460 (499)
T ss_pred ccHHHHHHhchHHh---hhheeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhh-ccceeEEEeecc--e
Confidence 99999999997766 8999996 7789999999999999998764 3334444 999999999976 4
Q ss_pred EEEEeeC--CEEEEcCCCCC
Q psy6127 497 MLASACS--NMAFWIPTLSA 514 (515)
Q Consensus 497 ~las~~~--dv~iW~~~~~~ 514 (515)
.+++++. ++-|||....+
T Consensus 461 qIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 461 QIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred EEEeccCCCeEEEEEcCCCC
Confidence 4555553 39999987654
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=288.58 Aligned_cols=292 Identities=18% Similarity=0.319 Sum_probs=265.1
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
++.....+.+.+|..+|+.+-|.|+-..+++++.|++|++||..+++....+++|...+..++|+..|.+++.++ .|-
T Consensus 95 ipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcS--sDl 172 (406)
T KOG0295|consen 95 IPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCS--SDL 172 (406)
T ss_pred CCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecC--Ccc
Confidence 444566677889999999999999999999999999999999999999999999999999999999998777665 687
Q ss_pred eEEEEECCC-CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEE
Q psy6127 288 TLRYLSLHD-NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 288 ~v~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~ 365 (515)
.+++||.++ .++++.+.+|...|.+++|-|.|.++++++.|.+|+.|++.++.++.++..+ .-+..+..+.||..+++
T Consensus 173 ~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As 252 (406)
T KOG0295|consen 173 SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIAS 252 (406)
T ss_pred chhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEe
Confidence 899999987 5778888999999999999999999999999999999999999999999544 45889999999999999
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC---------------CCEEEEEECCCcEEEEECCCCcee
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD---------------GKLILVSTNGSIIRLFDAFNGNCV 430 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~---------------~~~l~~~s~dg~i~iwd~~~~~~~ 430 (515)
++.|.++++|-+.+.+ +......|..+|.+++|-|. +.++.+++.|++|++||+.++.++
T Consensus 253 ~s~dqtl~vW~~~t~~-----~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL 327 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQ-----CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCL 327 (406)
T ss_pred cCCCceEEEEEeccch-----hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEE
Confidence 9999999999998864 44455678888889998763 258999999999999999999999
Q ss_pred EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEE
Q psy6127 431 QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFW 508 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW 508 (515)
.++.+|.+. |..++|+|.|+||+++.+|+++++||++++++...++. |..-|+++.|+.+..++++|+-+ +++|
T Consensus 328 ~tL~ghdnw---Vr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a-h~hfvt~lDfh~~~p~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 328 FTLVGHDNW---VRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 403 (406)
T ss_pred EEEecccce---eeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC-CcceeEEEecCCCCceEEeccccceeeee
Confidence 999997766 99999999999999999999999999999999999997 99999999999999999999855 9999
Q ss_pred cC
Q psy6127 509 IP 510 (515)
Q Consensus 509 ~~ 510 (515)
..
T Consensus 404 Ec 405 (406)
T KOG0295|consen 404 EC 405 (406)
T ss_pred ec
Confidence 74
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=278.46 Aligned_cols=334 Identities=12% Similarity=0.196 Sum_probs=278.5
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
..+.+|..|...+.+++..|... ++.++++|-...+|+ +.++.....+.||++.|+++.||.||.+||||..+
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~-----l~aTGGgDD~AflW~--~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdms 127 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNN-----LVATGGGDDLAFLWD--ISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMS 127 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCc-----eEEecCCCceEEEEE--ccCCcceeEecCCCCceEEEEEccCceEEEecCCC
Confidence 34568889988888888887443 677999999999999 88888999999999999999999999999999999
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
|.|+||+..++.....+...-..+.-+.|+|.+..++.+ +.||.+.+|.+.++...+.+.||..++++=.|.|+|+.+
T Consensus 128 G~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG--~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~ 205 (399)
T KOG0296|consen 128 GKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAG--STDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRI 205 (399)
T ss_pred ccEEEEEcccCceEEEeecccCceEEEEecccccEEEee--cCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceE
Confidence 999999999999998888777889999999977655444 589999999999988889999999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCCeEEEEec--CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce---eeecCCCCCcC
Q psy6127 323 ISGSYDKTVRVWDLRQPNNVGMIQL--SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA---SFKCPGERGCE 397 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~---~~~~~~~~~~~ 397 (515)
+++..||+|++||..+++++..+.. +...+++.++..+..++.|+.++.+++-+..+++..... .......+...
T Consensus 206 ~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~ 285 (399)
T KOG0296|consen 206 LTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEEL 285 (399)
T ss_pred EEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhh
Confidence 9999999999999999999888742 334678888889999999999888888776654311000 00011122333
Q ss_pred eEEEEE---cCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 398 WTGLKF---SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 398 i~~l~~---sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
+.++.+ +..-...|+|+.||+|.|||+...+...... +...|+.+.|-+ ..+|++++.+|.|+.||.++|++
T Consensus 286 ~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~----he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l 360 (399)
T KOG0296|consen 286 DESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE----HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQL 360 (399)
T ss_pred hhhhhhcccccccchhhcccccceEEEEecccchhheecc----CCCceEEEEEcC-cchheeeccCceEEeeeccccce
Confidence 444444 4455678999999999999998877655554 344499999998 78999999999999999999999
Q ss_pred EEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 475 VCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 475 ~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
+..+.+ |...|.+++.+|+.++++++|.| .+|++.+
T Consensus 361 ~~~y~G-H~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 361 KFTYTG-HQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEEEec-CchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 999999 99999999999999999999976 7888764
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=299.32 Aligned_cols=358 Identities=20% Similarity=0.304 Sum_probs=294.0
Q ss_pred hhheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee
Q psy6127 132 LKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY 211 (515)
Q Consensus 132 ~~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~ 211 (515)
.++||+|=..|.. .++++.....++.+.-....+..++++..... +++.++.-+-+-+|+ .+.-
T Consensus 277 t~~lvvgFssG~f----------~LyelP~f~lih~LSis~~~I~t~~~N~tGDW----iA~g~~klgQLlVwe--WqsE 340 (893)
T KOG0291|consen 277 TNLLVVGFSSGEF----------GLYELPDFNLIHSLSISDQKILTVSFNSTGDW----IAFGCSKLGQLLVWE--WQSE 340 (893)
T ss_pred ceEEEEEecCCee----------EEEecCCceEEEEeecccceeeEEEecccCCE----EEEcCCccceEEEEE--eecc
Confidence 4788888888887 89999999999988887777777777733321 666777767777888 4455
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
.-+...+||...+++++++|||+++|||+.||.|+|||..++-|..++..|+..|+.+.|+..++.+++++ .||+|+.
T Consensus 341 sYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssS--LDGtVRA 418 (893)
T KOG0291|consen 341 SYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSS--LDGTVRA 418 (893)
T ss_pred ceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEee--cCCeEEe
Confidence 55666789999999999999999999999999999999999999999999999999999999999887765 7999999
Q ss_pred EECCCCeeeEEecCC-CCCeEEEEEcCCCCEEEEEeCCC-cEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEEC
Q psy6127 292 LSLHDNKYVRYFPGH-VRKVSSLNLSPVDDSFISGSYDK-TVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 292 wd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~s~dg-~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
||+...+..+++... .....|++..|.|..+.+|+.|. .|.+|++.+|+.+..+ .|.+++.+++|+|++..|++++.
T Consensus 419 wDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SW 498 (893)
T KOG0291|consen 419 WDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSW 498 (893)
T ss_pred eeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccc
Confidence 999999999988754 34578899999999999998876 5999999999999888 56678999999999999999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc-----------
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL----------- 437 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~----------- 437 (515)
|.+|++||+-.... .... -.....+..++|+|+|+.+++++-||.|.+||...+.....+.+..
T Consensus 499 DkTVRiW~if~s~~-~vEt----l~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~ 573 (893)
T KOG0291|consen 499 DKTVRIWDIFSSSG-TVET----LEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDR 573 (893)
T ss_pred cceEEEEEeeccCc-eeee----EeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccce
Confidence 99999999976421 1112 2345568899999999999999999999999998776654443321
Q ss_pred ------cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC------------------------------
Q psy6127 438 ------NNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD------------------------------ 481 (515)
Q Consensus 438 ------~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------------------------------ 481 (515)
......+.+++++||+.+++|+..+.|++|++.++-.++.++-.
T Consensus 574 ~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqiS~N~sLdg~~efln~rkmtEfG~~~LiD~e~ 653 (893)
T KOG0291|consen 574 ITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQISDNRSLDGVLEFLNRRKMTEFGNMDLIDTEE 653 (893)
T ss_pred eehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEEeccccchhHHHHHhccccccccCCcccccccc
Confidence 12235789999999999999999999999999887655544200
Q ss_pred ----------------------C---CCCeEEEEECCCCCEEEEeeCC-EEEEcCCC
Q psy6127 482 ----------------------H---PSAVQSLQFNPKYHMLASACSN-MAFWIPTL 512 (515)
Q Consensus 482 ----------------------h---~~~V~~l~~sp~~~~las~~~d-v~iW~~~~ 512 (515)
+ .=.|+++.|+|.|+-+|.++.. +.||.++.
T Consensus 654 ~~~e~~i~~~lpG~~~gdlssRr~rpeIrv~sv~fsPtgraFAaatTEGl~IYsld~ 710 (893)
T KOG0291|consen 654 SDLEGRIDIALPGVQRGDLSSRRFRPEIRVTSVQFSPTGRAFAAATTEGLLIYSLDT 710 (893)
T ss_pred ccccccccccCCccccCCccccccCceEEEEEEEECCCcCeeeeecccceEEEecCC
Confidence 0 1137899999999999988754 88888754
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=284.19 Aligned_cols=322 Identities=22% Similarity=0.320 Sum_probs=273.0
Q ss_pred CceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeee--ecc------c----cCCcEEEEEEcCCCCEEEE
Q psy6127 171 PHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAK--VFR------E----NTDKINSLDYSSDGSLLIS 238 (515)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~--~~~------~----h~~~I~~l~~spd~~~las 238 (515)
|...|.+++++|-.... ++ +++++...++|+-....+.+.. .|+ + -+..|++++|+.+|..||+
T Consensus 177 ~~~~V~~~~WnP~~~~l---la-sg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 177 HESEVFICAWNPLRDGL---LA-SGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred CCCceEEEecCchhhhh---hh-ccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 66667777777765433 33 7888888999973222333321 111 1 2468999999999999999
Q ss_pred EeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCC
Q psy6127 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPV 318 (515)
Q Consensus 239 gs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 318 (515)
|+.||.+++|+.. |..+.++..|.++|.++.|+..|++++.++ .|+++.+||..++...+.+..|..+-.++.|-.
T Consensus 253 G~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~--vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~- 328 (524)
T KOG0273|consen 253 GSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGG--VDGTTILWDAHTGTVKQQFEFHSAPALDVDWQS- 328 (524)
T ss_pred eecCcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEecc--CCccEEEEeccCceEEEeeeeccCCccceEEec-
Confidence 9999999999975 888999999999999999999999888765 799999999999999999999999878889975
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 319 DDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 319 ~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
...+++++.|+.|+++-+....++.++ .|++++.++.|+|.|.+|++++.|++++||.+.... .......|...
T Consensus 329 ~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~-----~~~~l~~Hske 403 (524)
T KOG0273|consen 329 NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN-----SVHDLQAHSKE 403 (524)
T ss_pred CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc-----chhhhhhhccc
Confidence 456999999999999999998888887 566779999999999999999999999999987654 55666788889
Q ss_pred eEEEEEcCCC---------CEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 398 WTGLKFSPDG---------KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 398 i~~l~~sp~~---------~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
|..+.|+|+| ..+++++.|++|++||+..+.++..+..|... |.+++|+|+|+++|+|+.||.|.+|+
T Consensus 404 i~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~p---VysvafS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 404 IYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEP---VYSVAFSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred eeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCc---eEEEEecCCCcEEEecCCCCeeEecc
Confidence 9999999965 47899999999999999999999998775544 99999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 469 AERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 469 ~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
.++++..+...+ .+.|..++|+.+|..+..+-.+ +++-|+
T Consensus 481 ~~~~~l~~s~~~--~~~Ifel~Wn~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 481 TKTGKLVKSYQG--TGGIFELCWNAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred ccchheeEeecC--CCeEEEEEEcCCCCEEEEEecCCCceEEEe
Confidence 999999999985 5679999999999888776544 666554
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=279.71 Aligned_cols=292 Identities=19% Similarity=0.310 Sum_probs=261.3
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
.+|++.+++.||.+.|.|+++.|-+.++++|+.|++++|||+.+|+...++.+|-..|..+++++...++++++ .|+.
T Consensus 139 apwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~g--edk~ 216 (460)
T KOG0285|consen 139 APWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAG--EDKQ 216 (460)
T ss_pred CcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEec--CCCe
Confidence 46889999999999999999999999999999999999999999999999999999999999999999888775 8999
Q ss_pred EEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEE
Q psy6127 289 LRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~ 367 (515)
|+.||++.++.++.+.||-+.|.+++.+|.-..|++|+.|.++++||+++...+..+. +...+..+.+.|-...+++|+
T Consensus 217 VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S 296 (460)
T KOG0285|consen 217 VKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGS 296 (460)
T ss_pred eEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEec
Confidence 9999999999999999999999999999999999999999999999999999999985 667789999999888999999
Q ss_pred CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEE
Q psy6127 368 NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEAT 447 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 447 (515)
.|++|++||++.++ ......+|...+++++.+|....+++++.|. |+-|++..|..+..+.+|..- +.+++
T Consensus 297 ~D~tvrlWDl~agk-----t~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~~i---intl~ 367 (460)
T KOG0285|consen 297 HDSTVRLWDLRAGK-----TMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSGHNAI---INTLS 367 (460)
T ss_pred CCceEEEeeeccCc-----eeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhccccccce---eeeee
Confidence 99999999999986 6666678889999999999999999998874 999999999988887775543 88888
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC-------CCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 448 FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG-------DHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 448 ~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
.+.|| ++++|+++|.+.+||.++|...+.... .....|++.+|...|..|++|..| +++|.-+.
T Consensus 368 ~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 368 VNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred eccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 88775 778899999999999999866554421 134578999999999999998755 99997553
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=291.05 Aligned_cols=285 Identities=20% Similarity=0.362 Sum_probs=250.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
..+|..+.|.|+|+.|++|+..|.+.+|+..+-.....+..|..+|+++.|++++..++.+ +.+|.|++|+..-....
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSg--D~gG~iKyWqpnmnnVk 173 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISG--DKGGMIKYWQPNMNNVK 173 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEc--CCCceEEecccchhhhH
Confidence 5589999999999999999999999999986655556678999999999999999988755 57999999997655443
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 301 RYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
.....|...|++++|+|+...|++++.||+|+|||....+....+. ++-.+.++.|+|...++++|+.|..|++||.++
T Consensus 174 ~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS 253 (464)
T KOG0284|consen 174 IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS 253 (464)
T ss_pred HhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC
Confidence 3334455999999999999999999999999999999888777774 445699999999999999999999999999999
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC-CCEEEEE
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD-SQFVASG 458 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~-g~~l~sg 458 (515)
+. ++.....|...|..+.|+|++++|++++.|..++++|+++.+.+..+.+|... +++++|+|- ..++.+|
T Consensus 254 g~-----cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkd---v~~~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 254 GS-----CLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKD---VTSLTWHPLNESLFTSG 325 (464)
T ss_pred cc-----hhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhh---heeeccccccccceeec
Confidence 87 77777889999999999999999999999999999999988888888876655 999999995 4688899
Q ss_pred eCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCCCC
Q psy6127 459 STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLSAD 515 (515)
Q Consensus 459 s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~d 515 (515)
+.||.|..|.+...+++..+..+|...|++++|+|=|.+|++|+.| +++|.-..+.|
T Consensus 326 g~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d 384 (464)
T KOG0284|consen 326 GSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPGD 384 (464)
T ss_pred cCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCCCC
Confidence 9999999999998888888888899999999999999999999866 99998765543
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=261.86 Aligned_cols=284 Identities=21% Similarity=0.359 Sum_probs=245.4
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
..+.+.+|+++|.++.|+-||+|.++++.|.+|++|+...|.+++++.+|...|..++.+.|+..++.++ .|..+.+|
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~G--gDk~v~vw 86 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCG--GDKAVQVW 86 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCC--CCceEEEE
Confidence 3467889999999999999999999999999999999999999999999999999999999988776554 69999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--CeEEEEe-cCCCeeEEEECCCCCEEEEEECC
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP--NNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~--~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
|+++|+.++.+.+|.+.|+.++|+.+...+++|+.|.++++||.++. ++++.+. ....+.++.+ .+..+++|+.|
T Consensus 87 DV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v--~~heIvaGS~D 164 (307)
T KOG0316|consen 87 DVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV--AEHEIVAGSVD 164 (307)
T ss_pred EcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe--cccEEEeeccC
Confidence 99999999999999999999999999999999999999999999875 4556553 3344555555 57789999999
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
|+++.||++.+. .. ......+|++++|+++++..++++.|+++++.|-.+|+.++.+.+|.+.... ..++++
T Consensus 165 GtvRtydiR~G~-----l~--sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eyk-ldc~l~ 236 (307)
T KOG0316|consen 165 GTVRTYDIRKGT-----LS--SDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYK-LDCCLN 236 (307)
T ss_pred CcEEEEEeecce-----ee--hhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceee-eeeeec
Confidence 999999999865 22 2344568999999999999999999999999999999999999999876654 566788
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCC-eEEEEECCCCCEEEEee-CCEEEEc
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA-VQSLQFNPKYHMLASAC-SNMAFWI 509 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~-V~~l~~sp~~~~las~~-~dv~iW~ 509 (515)
.....+++|++||.|++||+.....+..+.. +... |++++++|...-+.++. +....|.
T Consensus 237 qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~-~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~ 297 (307)
T KOG0316|consen 237 QSDTHVFSGSEDGKVYFWDLVDETQISKLSV-VSTVIVTDLSCHPTMDDFITATGHGDLFWY 297 (307)
T ss_pred ccceeEEeccCCceEEEEEeccceeeeeecc-CCceeEEeeecccCccceeEecCCceecee
Confidence 7888999999999999999999999999987 6666 89999999665555544 4456664
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=306.99 Aligned_cols=299 Identities=25% Similarity=0.438 Sum_probs=259.3
Q ss_pred eeEeeeecccc-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--eeeEecCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 210 SYRVAKVFREN-TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 210 ~~~~~~~~~~h-~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
.+.....+.+| ...|.++.|+|+|+++++++.|+.+++|+..+.+ ....+.+|...|..++|+|++..++.+ +.|
T Consensus 147 ~~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~--s~D 224 (456)
T KOG0266|consen 147 VFSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSG--SDD 224 (456)
T ss_pred cceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEe--cCC
Confidence 34445666565 8899999999999999999999999999998777 777788999999999999999966655 589
Q ss_pred CeEEEEEC-CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEE
Q psy6127 287 ATLRYLSL-HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 287 ~~v~vwd~-~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~ 364 (515)
+++++||+ ..+..++++.+|...|++++|+|+++.+++|+.|++|++||++++++...+. +.+.+.+++|++++++++
T Consensus 225 ~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~ 304 (456)
T KOG0266|consen 225 KTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLV 304 (456)
T ss_pred ceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEE
Confidence 99999999 5568999999999999999999999999999999999999999999999984 445799999999999999
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCE
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPL 444 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~ 444 (515)
+++.|+.|++||+.++.......+....... +++.++|+|++.++++++.|+.+++||+..+.+...+.+|......+.
T Consensus 305 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
T KOG0266|consen 305 SASYDGTIRVWDLETGSKLCLKLLSGAENSA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIF 383 (456)
T ss_pred EcCCCccEEEEECCCCceeeeecccCCCCCC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEe
Confidence 9999999999999987632111222122222 699999999999999999999999999999999999998876533456
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCC-CCCeEEEEECCCCCEEEEee--CC--EEEEcCCC
Q psy6127 445 EATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDH-PSAVQSLQFNPKYHMLASAC--SN--MAFWIPTL 512 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~las~~--~d--v~iW~~~~ 512 (515)
+...++.+.++++|+.|+.|++||+.++..+..+.+ | ...+..+.|+|...++++++ .| +++|..+.
T Consensus 384 ~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~-h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~~ 455 (456)
T KOG0266|consen 384 SPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEG-HSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYDF 455 (456)
T ss_pred cccccCCCCeEEEEeCCceEEEEeCCccchhhhhcC-CCCCceeccccCCCcCeeeecCcCCCceEEEecCCC
Confidence 667788999999999999999999999999999998 8 88999999999999999987 45 88887653
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=285.66 Aligned_cols=292 Identities=25% Similarity=0.346 Sum_probs=247.2
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---eeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT---SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
.+..+++..|+++|+-+.||++|+||||++.|.+..+|++.... ..+++.+|..+|..+.|+||.+++++++ .+.
T Consensus 214 ~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg--~~e 291 (519)
T KOG0293|consen 214 SQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACG--FDE 291 (519)
T ss_pred chhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecC--chH
Confidence 34557789999999999999999999999999999999886543 4788899999999999999999988775 577
Q ss_pred eEEEEECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEE
Q psy6127 288 TLRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~ 365 (515)
.+.+||+.+|.....+. +|...+.+++|.|||..+++|+.|+++..||++....-.-- .....+.++++++||+++++
T Consensus 292 ~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~ 371 (519)
T KOG0293|consen 292 VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLL 371 (519)
T ss_pred heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEE
Confidence 79999999999888775 34688999999999999999999999999999765422111 11234889999999999999
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
.+.|..|++|+...... . ..-....+|++++.|.+++++++.-.+..+++||++..+.++.+.+|..... +..
T Consensus 372 v~~d~~i~l~~~e~~~d-----r-~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~f-iIr 444 (519)
T KOG0293|consen 372 VTVDKKIRLYNREARVD-----R-GLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHF-IIR 444 (519)
T ss_pred Eecccceeeechhhhhh-----h-ccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccce-EEE
Confidence 99999999999887431 1 1223456899999999999999999999999999999888999998876654 444
Q ss_pred EEEec-CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC-CCCEEEEeeCC--EEEEcCCC
Q psy6127 446 ATFTP-DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP-KYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 446 ~~~sp-~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~las~~~d--v~iW~~~~ 512 (515)
-+|-. +..++++|++|+.|+||+..+|+++..+.| |...|++++|+| +..++|+|+.| +|||.+..
T Consensus 445 SCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsG-Hs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 445 SCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSG-HSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred eccCCCCcceEEecCCCceEEEEEccCCceeEeecC-CcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 45544 458999999999999999999999999999 999999999999 66788988855 99998864
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=296.18 Aligned_cols=351 Identities=21% Similarity=0.304 Sum_probs=295.4
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
-+||.|-.+|.| ++|+..+...+.++.||...|..+.|+.... .+ .|++.|+.|.+|| +-.-.
T Consensus 78 l~lAVGYaDGsV----------qif~~~s~~~~~tfngHK~AVt~l~fd~~G~----rl-aSGskDt~IIvwD--lV~E~ 140 (888)
T KOG0306|consen 78 LLLAVGYADGSV----------QIFSLESEEILITFNGHKAAVTTLKFDKIGT----RL-ASGSKDTDIIVWD--LVGEE 140 (888)
T ss_pred ceEEEEecCceE----------EeeccCCCceeeeecccccceEEEEEcccCc----eE-eecCCCccEEEEE--eccce
Confidence 467999999999 9999999999999999988888777765542 23 4899999999999 66666
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec--------------------------------
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN-------------------------------- 260 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~-------------------------------- 260 (515)
-...++||++.|+..-|..+.+++++.|.|+.|++||+++..+..+.-
T Consensus 141 Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~ 220 (888)
T KOG0306|consen 141 GLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAF 220 (888)
T ss_pred eeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeec
Confidence 678899999999999999988999999999999999998765544422
Q ss_pred --------------------------------------------------------------------------------
Q psy6127 261 -------------------------------------------------------------------------------- 260 (515)
Q Consensus 261 -------------------------------------------------------------------------------- 260 (515)
T Consensus 221 ~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~ 300 (888)
T KOG0306|consen 221 EDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENE 300 (888)
T ss_pred ccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccc
Confidence
Q ss_pred ----------------------------------------------------------------------CCCCceeEEE
Q psy6127 261 ----------------------------------------------------------------------SKKYGVDLIK 270 (515)
Q Consensus 261 ----------------------------------------------------------------------~~~~~v~~~~ 270 (515)
+|...|..++
T Consensus 301 ~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~ 380 (888)
T KOG0306|consen 301 DDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLC 380 (888)
T ss_pred cchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEE
Confidence 2333344444
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe----------------------------------------cCCCCCe
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF----------------------------------------PGHVRKV 310 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~----------------------------------------~~h~~~v 310 (515)
++.+.. +++++ ..+.+++|+..+.++++++ +.|.+.|
T Consensus 381 vS~d~~--~~~Sg-a~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaI 457 (888)
T KOG0306|consen 381 VSSDSI--LLASG-AGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAI 457 (888)
T ss_pred eecCce--eeeec-CCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccce
Confidence 444432 22332 4678899998877765553 2699999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCC-----CCe--------EEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEe
Q psy6127 311 SSLNLSPVDDSFISGSYDKTVRVWDLRQ-----PNN--------VGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~dg~i~iwd~~~-----~~~--------~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~ 377 (515)
++++.+||+..+++||.|.+|++||..- +.. .+++.....+.++.+||||++++++--|.++++|-+
T Consensus 458 Wsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyfl 537 (888)
T KOG0306|consen 458 WSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFL 537 (888)
T ss_pred eeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEe
Confidence 9999999999999999999999999742 111 134566777999999999999999999999999999
Q ss_pred ecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
.+.+ -+....+|.-||.++..|||++.+++|+.|..|++|-+.-|.|-+.+.+|.+. |.++.|-|+...+++
T Consensus 538 DtlK-----FflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDS---vm~V~F~P~~~~FFt 609 (888)
T KOG0306|consen 538 DTLK-----FFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDS---VMSVQFLPKTHLFFT 609 (888)
T ss_pred ccee-----eeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCc---eeEEEEcccceeEEE
Confidence 9864 44556789999999999999999999999999999999999999999887665 999999999999999
Q ss_pred EeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 458 GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 458 gs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
++.|+.|+-||-+.-+++..+.+ |...|++++.+|+|.++++++.| +|+|.-..
T Consensus 610 ~gKD~kvKqWDg~kFe~iq~L~~-H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKFEEIQKLDG-HHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred ecCcceEEeechhhhhhheeecc-chheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 99999999999999999999999 99999999999999999999976 99998654
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=279.73 Aligned_cols=289 Identities=22% Similarity=0.335 Sum_probs=259.4
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
+...+.+|...+..+-+.|... +.++++.+.++++|| ..++++...++||++.|..++|+..|++||++|.|-
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~-----~v~~as~d~tikv~D--~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl 172 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEA-----LVVSASEDATIKVFD--TETGELERSLRGHTDSVFDISFDASGKYLATCSSDL 172 (406)
T ss_pred chhhhhccccceeeeeeccCce-----EEEEecCCceEEEEE--ccchhhhhhhhccccceeEEEEecCccEEEecCCcc
Confidence 3445667766677777766553 556888999999999 889999999999999999999999999999999999
Q ss_pred eEEEEECCC-CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE
Q psy6127 244 QIIIYDCEQ-GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 244 ~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
.+++||.++ .++++.+.+|+..|.++.|-|.|++++.++ .|.+|+.|++.++.++.++.+|...|..++.+.||..+
T Consensus 173 ~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~s--rD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~ 250 (406)
T KOG0295|consen 173 SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCS--RDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTII 250 (406)
T ss_pred chhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecc--cccceeEEecccceeEEeccCchHhEEEEEecCCeeEE
Confidence 999999986 577888999999999999999998887665 89999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCC---------------CCEEEEEECCCcEEEEEeecCCCCCce
Q psy6127 323 ISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPE---------------GLAFAIGVNSDSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~---------------~~~l~~g~~dg~i~i~d~~~~~~~~~~ 386 (515)
++++.|.++++|-+.++++...+ .+..++.+++|.|. +.++.+++.|++|++||+.++.
T Consensus 251 As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~----- 325 (406)
T KOG0295|consen 251 ASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM----- 325 (406)
T ss_pred EecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe-----
Confidence 99999999999999999888777 45567888888762 3589999999999999999985
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHI 466 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~i 466 (515)
++....+|...|.+++|+|.|+||+++.+|+++++||+++++|.+.+..|..- ++++.|+.+..++++|+-|.++++
T Consensus 326 cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hf---vt~lDfh~~~p~VvTGsVdqt~Kv 402 (406)
T KOG0295|consen 326 CLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHF---VTSLDFHKTAPYVVTGSVDQTVKV 402 (406)
T ss_pred EEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcce---eEEEecCCCCceEEeccccceeee
Confidence 77777899999999999999999999999999999999999999999875544 899999999999999999999999
Q ss_pred EEC
Q psy6127 467 WNA 469 (515)
Q Consensus 467 wd~ 469 (515)
|..
T Consensus 403 wEc 405 (406)
T KOG0295|consen 403 WEC 405 (406)
T ss_pred eec
Confidence 974
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=282.49 Aligned_cols=285 Identities=29% Similarity=0.484 Sum_probs=251.7
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
++++++|.++|++++|+|++++|++++.||.+++|+..+++....+..|...+..+.|+|+++.+++++ .++.+++||
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~~~~i~i~~ 79 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGS--SDKTIRLWD 79 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEc--CCCeEEEEE
Confidence 356789999999999999999999999999999999999888888999999999999999997777665 699999999
Q ss_pred CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcE
Q psy6127 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSI 372 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i 372 (515)
+.+++.+..+..|...+.++.|+|+++++++++.|+.+.+||+++++....+. +...+.++.|+|++.++++++.++.+
T Consensus 80 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 159 (289)
T cd00200 80 LETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTI 159 (289)
T ss_pred cCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcE
Confidence 99988888899999999999999998888888889999999999888877775 45568999999999999988889999
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
++||++..+ .......+...+.+++|+|+++.+++++.++.+++||+++++....+..+. ..+.+++|+|++
T Consensus 160 ~i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~---~~i~~~~~~~~~ 231 (289)
T cd00200 160 KLWDLRTGK-----CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE---NGVNSVAFSPDG 231 (289)
T ss_pred EEEEccccc-----cceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcC---CceEEEEEcCCC
Confidence 999998644 222223566689999999999999999999999999999988887775543 358999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 453 QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
.++++++.||.|++||+.+++....+.. |...|.+++|+|++.++++++.+ +++|+
T Consensus 232 ~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 232 YLLASGSEDGTIRVWDLRTGECVQTLSG-HTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cEEEEEcCCCcEEEEEcCCceeEEEccc-cCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 9999888899999999999999998886 99999999999999999998865 88885
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=288.64 Aligned_cols=354 Identities=17% Similarity=0.250 Sum_probs=294.9
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccc--cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHS--LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRS 210 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~ 210 (515)
+++++|+.+... ++|++...+. ...+.+|...|.++-|......+ .+-+.|+.+-+|.-..++
T Consensus 158 r~l~~gsrD~s~----------rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l-----~tvskdG~l~~W~~~~~P 222 (893)
T KOG0291|consen 158 RLLVTGSRDLSA----------RLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDL-----YTVSKDGALFVWTCDLRP 222 (893)
T ss_pred ceEEeccccceE----------EEEEeccccccceEeccCCCcceEEEEeccCcceE-----EEEecCceEEEEEecCCC
Confidence 788899999888 9999887776 44678887777776666554433 245667777777532111
Q ss_pred ------------------------------eEe--eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE
Q psy6127 211 ------------------------------YRV--AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT 258 (515)
Q Consensus 211 ------------------------------~~~--~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~ 258 (515)
|.. .+-+......|++.+|++..+.||+|-..|...+|.+..-..++.
T Consensus 223 ~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~ 302 (893)
T KOG0291|consen 223 PELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHS 302 (893)
T ss_pred cccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEE
Confidence 111 112333457899999999999999999999999999999999999
Q ss_pred ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy6127 259 INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~ 338 (515)
+.....+|..++|+..|+.+++++ +.-|.+-||+.++...+...++|...+++++++|||+++++|+.||.|++||..+
T Consensus 303 LSis~~~I~t~~~N~tGDWiA~g~-~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~S 381 (893)
T KOG0291|consen 303 LSISDQKILTVSFNSTGDWIAFGC-SKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQS 381 (893)
T ss_pred eecccceeeEEEecccCCEEEEcC-CccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccC
Confidence 998889999999999999999988 4689999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-CCCCCcCeEEEEEcCCCCEEEEEECC
Q psy6127 339 PNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-PGERGCEWTGLKFSPDGKLILVSTNG 416 (515)
Q Consensus 339 ~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~d 416 (515)
+-|..++ .|...++.+.|+..|+.+++.+-||+|+.||+.... .++. ..+......+++..|.|..+.+|+.|
T Consensus 382 gfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYr-----NfRTft~P~p~QfscvavD~sGelV~AG~~d 456 (893)
T KOG0291|consen 382 GFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYR-----NFRTFTSPEPIQFSCVAVDPSGELVCAGAQD 456 (893)
T ss_pred ceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccc-----eeeeecCCCceeeeEEEEcCCCCEEEeeccc
Confidence 9999998 566779999999999999999999999999998765 3333 22334456799999999999988877
Q ss_pred C-cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC-eEEEEEcCCCCCCeEEEEECCC
Q psy6127 417 S-IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG-YKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 417 g-~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~-~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
. .|++|++.+|+.+..+.+|.+ +|.+++|+|+|..|++++.|.+|++||+-.. ..+.+++ +...+.+++|+|+
T Consensus 457 ~F~IfvWS~qTGqllDiLsGHEg---PVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~--i~sdvl~vsfrPd 531 (893)
T KOG0291|consen 457 SFEIFVWSVQTGQLLDILSGHEG---PVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE--IRSDVLAVSFRPD 531 (893)
T ss_pred eEEEEEEEeecCeeeehhcCCCC---cceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe--eccceeEEEEcCC
Confidence 5 699999999999999988655 4999999999999999999999999998554 3444554 6778999999999
Q ss_pred CCEEEEee--CCEEEEcCCC
Q psy6127 495 YHMLASAC--SNMAFWIPTL 512 (515)
Q Consensus 495 ~~~las~~--~dv~iW~~~~ 512 (515)
|+-+|.+. |.+.+||...
T Consensus 532 G~elaVaTldgqItf~d~~~ 551 (893)
T KOG0291|consen 532 GKELAVATLDGQITFFDIKE 551 (893)
T ss_pred CCeEEEEEecceEEEEEhhh
Confidence 99988876 5699999864
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=304.35 Aligned_cols=278 Identities=21% Similarity=0.343 Sum_probs=239.4
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
|..++..-...++|..|++|++.||.|-.|..|++|.+... .++.++... +-.. +=..+ .|-.+.+.
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~-kl~~lk~~~-------~l~~---~d~~s--ad~~~~~~ 436 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPK-KLKKLKDAS-------DLSN---IDTES--ADVDVDML 436 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchh-hhccccchh-------hhcc---ccccc--cchhhhhc
Confidence 44555556678999999999999999999999999998754 333333221 1111 11122 35557778
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCc
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
|.++.....++.||.++|....|+|+.++|+++|.|+++++|.+.+..++..+. +..++..+.|+|.|-+||+++.|++
T Consensus 437 D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~t 516 (707)
T KOG0263|consen 437 DDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQT 516 (707)
T ss_pred cccCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCce
Confidence 878777788899999999999999999999999999999999999999988884 4467899999999999999999999
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
.++|...... ..+...+|...+.|+.|+|+..|+++|+.|.++++||+.+|..++.+.+|.. +|.+++|||+
T Consensus 517 ArLWs~d~~~-----PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~---~V~al~~Sp~ 588 (707)
T KOG0263|consen 517 ARLWSTDHNK-----PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKG---PVTALAFSPC 588 (707)
T ss_pred eeeeecccCC-----chhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCC---ceEEEEEcCC
Confidence 9999988744 6666678899999999999999999999999999999999999999988554 4999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
|++|++|+.||.|.+||+.+++++..+.+ |.+.|.++.|+.||.+||+|++| +++||+..
T Consensus 589 Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~-Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 589 GRYLASGDEDGLIKIWDLANGSLVKQLKG-HTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CceEeecccCCcEEEEEcCCCcchhhhhc-ccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 99999999999999999999999999999 99999999999999999999976 99999864
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=253.02 Aligned_cols=286 Identities=19% Similarity=0.354 Sum_probs=233.7
Q ss_pred eeeeccccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCC---CeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 213 VAKVFRENTDKINSLDYSSD-GSLLISCSDDDQIIIYDCEQ---GTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd-~~~lasgs~dg~i~iwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
.++.+++|++.|..++|+|- |..|||||.|+.|++|+... -.+...+ .+|+..|+.++|+|.|+++++++ +|.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aS--FD~ 83 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASAS--FDA 83 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEee--ccc
Confidence 45778999999999999997 89999999999999999884 3344334 47899999999999999776665 899
Q ss_pred eEEEEECCCC--eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC---eEEEE-ecCCCeeEEEECCCCC
Q psy6127 288 TLRYLSLHDN--KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN---NVGMI-QLSGNKPIAAYDPEGL 361 (515)
Q Consensus 288 ~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~---~~~~~-~~~~~~~~~~~s~~~~ 361 (515)
++.||.-..+ +++.++.||...|.+++|+++|++||++++|+.|-||.+..+. +...+ .|...+..+.|+|...
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d 163 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED 163 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence 9999986644 6789999999999999999999999999999999999998553 44555 4556689999999999
Q ss_pred EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCC
Q psy6127 362 AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441 (515)
Q Consensus 362 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 441 (515)
+|++++.|.+|++|+-.. ...........+|...|.+++|+|.|..|++++.|++++||...+. +.. .+..
T Consensus 164 lL~S~SYDnTIk~~~~~~--dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----~~~--~~sr 234 (312)
T KOG0645|consen 164 LLFSCSYDNTIKVYRDED--DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----LSG--MHSR 234 (312)
T ss_pred eeEEeccCCeEEEEeecC--CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC-----cch--hccc
Confidence 999999999999998773 2222345556677779999999999999999999999999986522 111 1334
Q ss_pred CCEEEEEecCCCEEEEEeCCCcEEEEECCCC------eEEEEEcCCCCCCeEEEEECCC-CCEEEEeeCC--EEEEcCC
Q psy6127 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERG------YKVCVLDGDHPSAVQSLQFNPK-YHMLASACSN--MAFWIPT 511 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~------~~~~~~~~~h~~~V~~l~~sp~-~~~las~~~d--v~iW~~~ 511 (515)
++..++|. ...|++++.|+.|++|.-..+ +.+....+.|...|++++|+|. ...|++++.| +++|.+.
T Consensus 235 ~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 235 ALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 47889998 568999999999999976542 2333344569999999999994 6778888755 9999875
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=288.23 Aligned_cols=291 Identities=19% Similarity=0.337 Sum_probs=249.8
Q ss_pred eeEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 210 SYRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQ-GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
+-+.++++.||+..|+++.|.| .+.+|++|+.|+.|+||++.. +++++++.+|..+|..++|+++|..+++++ .|+
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s--fD~ 280 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSAS--FDR 280 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeee--cce
Confidence 3456789999999999999999 899999999999999999986 899999999999999999999999988776 899
Q ss_pred eEEEEECCCCeeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEE
Q psy6127 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~ 365 (515)
.+++||+++|+++..+. -...+.|+.|+|++ +.+++|+.|+.|+.||+++++.++.+ .+-+.+..+.|-++|+.+++
T Consensus 281 ~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFis 359 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFIS 359 (503)
T ss_pred eeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEee
Confidence 99999999999999886 45678999999999 78999999999999999999988888 34466899999999999999
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc---eeEEeeccccCCCC
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN---CVQSLSGVLNNNAS 442 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~---~~~~~~~~~~~~~~ 442 (515)
.+.|+++++|+.+..- +.........| ...++..+|++++++.-+.|+.|.++.+...- ..+.+.+|.... .
T Consensus 360 sSDdks~riWe~~~~v--~ik~i~~~~~h--smP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaG-y 434 (503)
T KOG0282|consen 360 SSDDKSVRIWENRIPV--PIKNIADPEMH--TMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAG-Y 434 (503)
T ss_pred eccCccEEEEEcCCCc--cchhhcchhhc--cCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccC-c
Confidence 9999999999998743 22222222333 34589999999999999999999999875432 234566665433 3
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCC-CCEEEEee--CCEEEEc
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK-YHMLASAC--SNMAFWI 509 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~-~~~las~~--~dv~iW~ 509 (515)
-..+.|||||.+|++|+.||.+.+||.++-+.+..+.. |..++..+.|+|. ...+|+++ |.|++|+
T Consensus 435 s~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka-h~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 435 SCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA-HDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc-CCcceEEEEecCCCcceeEecccCceeEecC
Confidence 57899999999999999999999999999999999998 9999999999994 45677777 5599996
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=272.37 Aligned_cols=285 Identities=20% Similarity=0.301 Sum_probs=242.7
Q ss_pred eeccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC--eeee--Eec----------CCCCceeEEEEecCCCeEE
Q psy6127 215 KVFRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQG--TSKN--TIN----------SKKYGVDLIKFTHSKTTAI 279 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~--~~~~--~~~----------~~~~~v~~~~~~~~~~~l~ 279 (515)
+.++ |+.+|.+.+|+|-.. .+++|+.|-+.++|++... .... .++ .....|++++|+.+|..++
T Consensus 173 kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~La 251 (524)
T KOG0273|consen 173 KVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLA 251 (524)
T ss_pred eecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEE
Confidence 3444 999999999999555 8999999999999998741 1111 111 1236799999999999888
Q ss_pred EEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCe-eEEEECC
Q psy6127 280 HASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK-PIAAYDP 358 (515)
Q Consensus 280 ~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~s~ 358 (515)
+++ .||.+++|+. +|..+.++..|.++|.++.|+.+|.+|++++.|+++.+||..+++..+.+..+..+ ..+.|-.
T Consensus 252 tG~--~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~ 328 (524)
T KOG0273|consen 252 TGS--EDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQS 328 (524)
T ss_pred Eee--cCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEec
Confidence 775 8999999995 57778889999999999999999999999999999999999999999999777655 4577764
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN 438 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 438 (515)
...+++++.|+.|+++.+.... +.....+|.++|.++.|+|.|..|++++.|+++++|......+...+..|..
T Consensus 329 -~~~F~ts~td~~i~V~kv~~~~-----P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hsk 402 (524)
T KOG0273|consen 329 -NDEFATSSTDGCIHVCKVGEDR-----PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSK 402 (524)
T ss_pred -CceEeecCCCceEEEEEecCCC-----cceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhcc
Confidence 4568888999999999998744 3333446889999999999999999999999999999999988888887665
Q ss_pred CCCCCEEEEEecCC---------CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEE
Q psy6127 439 NNASPLEATFTPDS---------QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAF 507 (515)
Q Consensus 439 ~~~~i~~~~~sp~g---------~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~i 507 (515)
. |..+.|+|+| ..+++++.|++|++||+..|.+++.+.. |..+|.+++|+|+|+++|+|+-+ +.+
T Consensus 403 e---i~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k-H~~pVysvafS~~g~ylAsGs~dg~V~i 478 (524)
T KOG0273|consen 403 E---IYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK-HQEPVYSVAFSPNGRYLASGSLDGCVHI 478 (524)
T ss_pred c---eeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc-CCCceEEEEecCCCcEEEecCCCCeeEe
Confidence 5 8999999975 3789999999999999999999999987 99999999999999999999855 999
Q ss_pred EcCCCC
Q psy6127 508 WIPTLS 513 (515)
Q Consensus 508 W~~~~~ 513 (515)
|+.+..
T Consensus 479 ws~~~~ 484 (524)
T KOG0273|consen 479 WSTKTG 484 (524)
T ss_pred ccccch
Confidence 998754
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=307.47 Aligned_cols=301 Identities=17% Similarity=0.282 Sum_probs=240.8
Q ss_pred CcEEEEccceeeeeEeee-----eccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----e----eeeEecCCCC
Q psy6127 198 RTITKCSENLVRSYRVAK-----VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG----T----SKNTINSKKY 264 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~-----~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~----~----~~~~~~~~~~ 264 (515)
++.+++|+ ....+... .+..|.+.|.+++|+|+|++||+|+.|+.|+||+.... . +...+. +..
T Consensus 457 ~gl~~~~~--~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~ 533 (793)
T PLN00181 457 EGLCKYLS--FSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRS 533 (793)
T ss_pred hhhhhhhc--ccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccC
Confidence 55677776 44333332 24569999999999999999999999999999997532 1 122233 346
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCeEE
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP-VDDSFISGSYDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~ 343 (515)
.+.+++|++.....+ ++++.|++|++||+.+++.+..+.+|.+.|++++|+| ++.+|++|+.|++|++||++++..+.
T Consensus 534 ~v~~l~~~~~~~~~l-as~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~ 612 (793)
T PLN00181 534 KLSGICWNSYIKSQV-ASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG 612 (793)
T ss_pred ceeeEEeccCCCCEE-EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE
Confidence 789999998643333 3335899999999999999999999999999999997 68899999999999999999999988
Q ss_pred EEecCCCeeEEEEC-CCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy6127 344 MIQLSGNKPIAAYD-PEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLF 422 (515)
Q Consensus 344 ~~~~~~~~~~~~~s-~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iw 422 (515)
.+.....+.++.|+ +++..+++|+.||.|++||++.... .......|...|..+.|. ++.++++++.|++|++|
T Consensus 613 ~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~----~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiW 687 (793)
T PLN00181 613 TIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL----PLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLW 687 (793)
T ss_pred EEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc----cceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEE
Confidence 88777778899994 5799999999999999999986431 122234678899999997 67899999999999999
Q ss_pred ECCCC------ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc------------CCCCC
Q psy6127 423 DAFNG------NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD------------GDHPS 484 (515)
Q Consensus 423 d~~~~------~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~------------~~h~~ 484 (515)
|++.+ +++..+.+|.. .+..++|+|++++|++|+.||.|++|+.....++..+. ..|..
T Consensus 688 d~~~~~~~~~~~~l~~~~gh~~---~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 764 (793)
T PLN00181 688 DLSMSISGINETPLHSFMGHTN---VKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQ 764 (793)
T ss_pred eCCCCccccCCcceEEEcCCCC---CeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCc
Confidence 99753 45666666543 48899999999999999999999999987665443221 12456
Q ss_pred CeEEEEECCCCCEEEEeeC--CEEEEcC
Q psy6127 485 AVQSLQFNPKYHMLASACS--NMAFWIP 510 (515)
Q Consensus 485 ~V~~l~~sp~~~~las~~~--dv~iW~~ 510 (515)
.|.+++|+|++.++++|+. .++||++
T Consensus 765 ~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 765 FISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 7999999999999999884 4999986
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=278.90 Aligned_cols=293 Identities=19% Similarity=0.253 Sum_probs=249.2
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeee-eEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRS-YRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~-~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
+.+.++.||...|.++.+.+... -|..|++.|+.|++|+ +.. ++|+++|.||..+|.+++|+++|..++|+|.
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~----hLlLS~gmD~~vklW~--vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf 278 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKG----HLLLSGGMDGLVKLWN--VYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASF 278 (503)
T ss_pred hheeeccCCccccchhhhcccee----eEEEecCCCceEEEEE--EecCcceehhhhcchhhhhhhhccccCCeeeeeec
Confidence 45678889987788877776431 2566999999999998 554 8999999999999999999999999999999
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
|+.+++||+++|+++..+... ..++|+.|.|++..++++++ .|+.|+.||+++++.++.+..|-+.|..+.|-++|+.
T Consensus 279 D~~lKlwDtETG~~~~~f~~~-~~~~cvkf~pd~~n~fl~G~-sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~r 356 (503)
T KOG0282|consen 279 DRFLKLWDTETGQVLSRFHLD-KVPTCVKFHPDNQNIFLVGG-SDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRR 356 (503)
T ss_pred ceeeeeeccccceEEEEEecC-CCceeeecCCCCCcEEEEec-CCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCce
Confidence 999999999999999988754 57899999999977777764 6999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCC--CcC
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGER--GCE 397 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~~ 397 (515)
+++++.|+++++|+.+.+..++.. ......+++..+|++.++++-+.|+.|.+|.+...-... ..+...+| .+.
T Consensus 357 FissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~n--kkK~feGh~vaGy 434 (503)
T KOG0282|consen 357 FISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLN--KKKRFEGHSVAGY 434 (503)
T ss_pred EeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccC--HhhhhcceeccCc
Confidence 999999999999999988777655 233457899999999999999999999999976532111 11112222 223
Q ss_pred eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEE
Q psy6127 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWN 468 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd 468 (515)
-..+.|||||.+|++|+.||.+.+||.++-+.+..+..|.. .+..+.|+|.. ..+|+++.||.|++||
T Consensus 435 s~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~---~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 435 SCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQ---PCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCc---ceEEEEecCCCcceeEecccCceeEecC
Confidence 34799999999999999999999999999999998888643 48999999965 6899999999999996
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=260.09 Aligned_cols=290 Identities=17% Similarity=0.240 Sum_probs=253.2
Q ss_pred cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCe
Q psy6127 165 LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQ 244 (515)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~ 244 (515)
-+.+.+|..-|.++.+.|... ...+++.|+++++|| +.++++..++.||...|..+++|+-..||++++.|+.
T Consensus 144 ~rVi~gHlgWVr~vavdP~n~-----wf~tgs~DrtikIwD--latg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~ 216 (460)
T KOG0285|consen 144 YRVISGHLGWVRSVAVDPGNE-----WFATGSADRTIKIWD--LATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQ 216 (460)
T ss_pred hhhhhhccceEEEEeeCCCce-----eEEecCCCceeEEEE--cccCeEEEeecchhheeeeeeecccCceEEEecCCCe
Confidence 345778855577777776643 334899999999999 9999999999999999999999999999999999999
Q ss_pred EEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEE
Q psy6127 245 IIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFIS 324 (515)
Q Consensus 245 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s 324 (515)
|+.||++..+.++.+.+|-..|.|++..|.-+.++++ +.|.++++||+++...+..+.||..+|..+.+.|-+..+++
T Consensus 217 VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~--grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit 294 (460)
T KOG0285|consen 217 VKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTG--GRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVIT 294 (460)
T ss_pred eEEEechhhhhHHHhccccceeEEEeccccceeEEec--CCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEE
Confidence 9999999999999999999999999999998876655 48999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEE
Q psy6127 325 GSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF 403 (515)
Q Consensus 325 ~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~ 403 (515)
||.|++|++||++.++....+ .+...+.+++.+|....+++++.| .|+-|++..+. .+.....|...+.+++.
T Consensus 295 ~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~-----f~~nlsgh~~iintl~~ 368 (460)
T KOG0285|consen 295 GSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGE-----FLQNLSGHNAIINTLSV 368 (460)
T ss_pred ecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccc-----hhhccccccceeeeeee
Confidence 999999999999999988877 455668999999999999998766 68999988765 34446788889999999
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEeec-----cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG-----VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 404 sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
+.|+ ++++|+++|.+.+||.++|...+.... .......|.+.+|...|..|++|..|.+|++|.-+
T Consensus 369 nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 369 NSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 9887 788999999999999999877665532 22344568999999999999999999999999754
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=271.42 Aligned_cols=384 Identities=14% Similarity=0.179 Sum_probs=279.7
Q ss_pred eeeeeeccceEEeCCcceeeeehhhhHhhhhhhhhhhhheeecccccccccccCCCCcCCCcchhhccccccccCCceeE
Q psy6127 96 LEIKRIDTEEIVLNPSCLIKLKEIKCMLAQKAVPKILKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVS 175 (515)
Q Consensus 96 l~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~ 175 (515)
+-||..+.|.+.. .......+...+.|.... +.+.+|+++.+| +++++.+++.+.+|+.|...+
T Consensus 37 V~IWnyetqtmVk-sfeV~~~PvRa~kfiaRk-----nWiv~GsDD~~I----------rVfnynt~ekV~~FeAH~DyI 100 (794)
T KOG0276|consen 37 VQIWNYETQTMVK-SFEVSEVPVRAAKFIARK-----NWIVTGSDDMQI----------RVFNYNTGEKVKTFEAHSDYI 100 (794)
T ss_pred eEEEecccceeee-eeeecccchhhheeeecc-----ceEEEecCCceE----------EEEecccceeeEEeeccccce
Confidence 4478887776432 111222233334443332 677899999999 999999999999999998888
Q ss_pred EEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCe
Q psy6127 176 LFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGT 254 (515)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~ 254 (515)
.++...|..+ ...++++|.+|++|+. ...|.|.++|.||+.-|.+++|+| |.+.+|++|-|++|++|.+....
T Consensus 101 R~iavHPt~P-----~vLtsSDDm~iKlW~w-e~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~ 174 (794)
T KOG0276|consen 101 RSIAVHPTLP-----YVLTSSDDMTIKLWDW-ENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPH 174 (794)
T ss_pred eeeeecCCCC-----eEEecCCccEEEEeec-cCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCC
Confidence 8888888776 4468999999999985 457999999999999999999999 77899999999999999999999
Q ss_pred eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy6127 255 SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334 (515)
Q Consensus 255 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw 334 (515)
+..++.+|+.+|+|+.|-+.|+.-++.+|+.|.+++|||.++..+++++.||...|..+.|+|.-+.+++|+.||+++||
T Consensus 175 ~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriW 254 (794)
T KOG0276|consen 175 PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIW 254 (794)
T ss_pred CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEe
Confidence 99999999999999999998877777777899999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECCCcEEEE------------------EeecC---------------
Q psy6127 335 DLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNSDSIKLY------------------DVRSY--------------- 380 (515)
Q Consensus 335 d~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~i~i~------------------d~~~~--------------- 380 (515)
+..+-+...++... +.+.+++-.+.++.++.|..+|.+.+= ...+.
T Consensus 255 hs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgreeP~vsMd~~gKIiwa~~~ei~~~~~ks~~~~~ev 334 (794)
T KOG0276|consen 255 NSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGREEPAVSMDSNGKIIWAVHSEIQAVNLKSVGAQKEV 334 (794)
T ss_pred cCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEccCCCCceeecCCccEEEEcCceeeeeeceeccCcccc
Confidence 99888777776443 458888888888888888877765432 11100
Q ss_pred ---CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC------------------CCCc--------eeE
Q psy6127 381 ---DKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA------------------FNGN--------CVQ 431 (515)
Q Consensus 381 ---~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~------------------~~~~--------~~~ 431 (515)
+..+ ...+..+...-....++-+|+|+++++++ ||.-.||.. ..+. .+.
T Consensus 335 ~DgErL~-LsvKeLgs~eiyPq~L~hsPNGrfV~Vcg-dGEyiIyTala~RnK~fG~~~eFvw~~dsne~avRes~~~vk 412 (794)
T KOG0276|consen 335 TDGERLP-LSVKELGSVEIYPQTLAHSPNGRFVVVCG-DGEYIIYTALALRNKAFGSGLEFVWAADSNEFAVRESNGNVK 412 (794)
T ss_pred cCCcccc-chhhhccccccchHHhccCCCCcEEEEec-CccEEEEEeeehhhcccccceeEEEcCCCCeEEEEecCCceE
Confidence 0000 00000011111123577889998877664 555555532 1111 011
Q ss_pred EeeccccCCCCCEEEEEec---CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC-EEE
Q psy6127 432 SLSGVLNNNASPLEATFTP---DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN-MAF 507 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp---~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d-v~i 507 (515)
.++....+.+ ....++. -|..|+....++.+++||.++++.++++.. ....+.|+.+|.+++.++.+ ..+
T Consensus 413 i~knfke~ks--i~~~~~~e~i~gg~Llg~~ss~~~~fydW~~~~lVrrI~v----~~k~v~w~d~g~lVai~~d~Sfyi 486 (794)
T KOG0276|consen 413 IFKNFKEHKS--IRPDMSAEGIFGGPLLGVRSSDFLCFYDWESGELVRRIEV----TSKHVYWSDNGELVAIAGDDSFYI 486 (794)
T ss_pred EEecceeccc--cccccceeeecCCceEEEEeCCeEEEEEcccceEEEEEee----ccceeEEecCCCEEEEEecCceeE
Confidence 1111111100 0111111 133344444567799999999999999975 23478999999999988765 444
Q ss_pred Ec
Q psy6127 508 WI 509 (515)
Q Consensus 508 W~ 509 (515)
..
T Consensus 487 l~ 488 (794)
T KOG0276|consen 487 LK 488 (794)
T ss_pred EE
Confidence 43
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=242.89 Aligned_cols=290 Identities=17% Similarity=0.237 Sum_probs=234.9
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccce-eeeeEeeeec-cccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENL-VRSYRVAKVF-RENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~-~~~~~~~~~~-~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
.+.++++|...+..+++.|..- . +.++++.|..+++|+.. ..++.|..++ .+|+..|.+++|+|.|++||+||.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g---~-ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKG---V-ILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCc---e-EEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 4556778866666666666531 1 33489999999999955 4568888777 489999999999999999999999
Q ss_pred CCeEEEEECCCC--eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC---eeeEEecCCCCCeEEEEEc
Q psy6127 242 DDQIIIYDCEQG--TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN---KYVRYFPGHVRKVSSLNLS 316 (515)
Q Consensus 242 dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~---~~~~~~~~h~~~v~~l~~~ 316 (515)
|.++.||.-..+ +++.++.+|+..|.+++|+++|.+|++++ .|+.|-+|.+..+ ++...+++|+..|..+.|+
T Consensus 82 D~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCS--RDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WH 159 (312)
T KOG0645|consen 82 DATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCS--RDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWH 159 (312)
T ss_pred cceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEee--CCCeEEEEEecCCCcEEEEeeeccccccccEEEEc
Confidence 999999986643 77899999999999999999999888776 8999999998744 5678899999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcC-C--CCeEEEEec-CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCC
Q psy6127 317 PVDDSFISGSYDKTVRVWDLR-Q--PNNVGMIQL-SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 317 ~~~~~l~s~s~dg~i~iwd~~-~--~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
|...+|+++|.|++|++|+-. . -++.+++.. ...+.+++|+|.|..+++++.|++++||-... ....
T Consensus 160 Pt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~---------~~~~ 230 (312)
T KOG0645|consen 160 PTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT---------DLSG 230 (312)
T ss_pred CCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc---------Ccch
Confidence 999999999999999999876 2 346667744 34799999999999999999999999998653 1234
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--eeE--EeeccccCCCCCEEEEEecC-CCEEEEEeCCCcEEEE
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN--CVQ--SLSGVLNNNASPLEATFTPD-SQFVASGSTDGQVHIW 467 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~--~~~--~~~~~~~~~~~i~~~~~sp~-g~~l~sgs~dg~I~iw 467 (515)
.|..++..+.|. ...|++++.|+.|++|.-...- +.. .......|...|+++.|.|. ...|++|++||.|++|
T Consensus 231 ~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W 308 (312)
T KOG0645|consen 231 MHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFW 308 (312)
T ss_pred hcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEE
Confidence 566788889998 4589999999999999865421 111 11122334556999999995 6799999999999999
Q ss_pred ECC
Q psy6127 468 NAE 470 (515)
Q Consensus 468 d~~ 470 (515)
.+.
T Consensus 309 ~l~ 311 (312)
T KOG0645|consen 309 ELE 311 (312)
T ss_pred Eec
Confidence 874
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=285.29 Aligned_cols=262 Identities=21% Similarity=0.307 Sum_probs=216.7
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
....+++.||+++|..+.|+|+.++|+++|.|+++|+|.+.+..++-.+++|..+|+.+.|+|.|-+++++ +.|++.+
T Consensus 441 ~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFata--s~D~tAr 518 (707)
T KOG0263|consen 441 SGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATA--SHDQTAR 518 (707)
T ss_pred CceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEec--CCCceee
Confidence 34445689999999999999999999999999999999999999999999999999999999998766665 5799999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECC
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
+|......+.+.+.+|-+.|.|+.|+|+..++++||.|.+|++||+.+|..++.+ .|.+++.+++|+|+|++|++|+.|
T Consensus 519 LWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed 598 (707)
T KOG0263|consen 519 LWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDED 598 (707)
T ss_pred eeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccC
Confidence 9999999999999999999999999999999999999999999999999999999 556779999999999999999999
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
|.|.+||+.++. .+....+|.+.|.++.|+.+|..|++|+.|.+|++||+......... .+. .+..+
T Consensus 599 ~~I~iWDl~~~~-----~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~----~~~----~~~~~ 665 (707)
T KOG0263|consen 599 GLIKIWDLANGS-----LVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNL----GHI----STSNS 665 (707)
T ss_pred CcEEEEEcCCCc-----chhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccccc----ccc----ccccc
Confidence 999999999875 45555677999999999999999999999999999998654332000 010 00000
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
... ..++ .+..++..+.. -..+|..+.|......|+.|
T Consensus 666 ~~~------~~~~-------~~~~llgs~~t-K~tpv~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 666 AIT------QENN-------ASSLLLGSFYT-KNTPVVGLHFTRRNLLLAVG 703 (707)
T ss_pred ccc------ccCC-------CCcceeeeeee-cCceEEEEEEeccceeEEec
Confidence 000 0001 34455666655 45588889888876555554
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=271.00 Aligned_cols=349 Identities=15% Similarity=0.246 Sum_probs=261.1
Q ss_pred cCCCcchhhcccccccc--CCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEc
Q psy6127 153 KLGSWDFELLHSLSSLE--SPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYS 230 (515)
Q Consensus 153 ~~~~wd~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~s 230 (515)
.+.+||+.+|+....+. .....+.++...+... +.+-+-.|+.|++|+ ..+....-++.||..+|+++.|+
T Consensus 44 ~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l-----~lAVGYaDGsVqif~--~~s~~~~~tfngHK~AVt~l~fd 116 (888)
T KOG0306|consen 44 QVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDIL-----LLAVGYADGSVQIFS--LESEEILITFNGHKAAVTTLKFD 116 (888)
T ss_pred cEeEEeeecchhhhhhhhhcccceEEEeeccCCcc-----eEEEEecCceEEeec--cCCCceeeeecccccceEEEEEc
Confidence 34899999994333222 2233466666655553 223567789999999 55668888999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV 310 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v 310 (515)
..|..|||||.|+.|.+||+-...-...+++|...|+..-|..+.+.++.. +.|+.|++||+++..+..+.-.|.+.+
T Consensus 117 ~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~--sKDs~iK~WdL~tqhCf~Thvd~r~Ei 194 (888)
T KOG0306|consen 117 KIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSV--SKDSMIKFWDLETQHCFETHVDHRGEI 194 (888)
T ss_pred ccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEe--ccCceEEEEecccceeeeEEecccceE
Confidence 999999999999999999999888889999999999999998866655544 489999999999999999988999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCC------------------------CCeEE-----------------------
Q psy6127 311 SSLNLSPVDDSFISGSYDKTVRVWDLRQ------------------------PNNVG----------------------- 343 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~dg~i~iwd~~~------------------------~~~~~----------------------- 343 (515)
+.+++.+ +.+++++.|+.+++|++.. ++.+.
T Consensus 195 w~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~fr 272 (888)
T KOG0306|consen 195 WALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFR 272 (888)
T ss_pred EEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhhee
Confidence 9999986 7888889999999998700 00000
Q ss_pred --------------------------------------------------------------------------------
Q psy6127 344 -------------------------------------------------------------------------------- 343 (515)
Q Consensus 344 -------------------------------------------------------------------------------- 343 (515)
T Consensus 273 I~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~ 352 (888)
T KOG0306|consen 273 IRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLE 352 (888)
T ss_pred ecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEec
Confidence
Q ss_pred ----------------EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCC-------------------------
Q psy6127 344 ----------------MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDK------------------------- 382 (515)
Q Consensus 344 ----------------~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~------------------------- 382 (515)
...|...+..++++.+...+++| ..+.+++|+..+.+.
T Consensus 353 ~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sg-a~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~ 431 (888)
T KOG0306|consen 353 NSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASG-AGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGT 431 (888)
T ss_pred cCCCCCccccccceeeeccchhheeEEEeecCceeeeec-CCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEec
Confidence 00011123344444444333333 345666666553220
Q ss_pred --CCc--------eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-----CceeEEeeccc----cCCCCC
Q psy6127 383 --GPF--------ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-----GNCVQSLSGVL----NNNASP 443 (515)
Q Consensus 383 --~~~--------~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-----~~~~~~~~~~~----~~~~~i 443 (515)
... ........|.+.+.+++.+||++.+++|+.|.+|++||..- |...+.+..+. .-...+
T Consensus 432 k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddv 511 (888)
T KOG0306|consen 432 KNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDV 511 (888)
T ss_pred cCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccE
Confidence 000 02222357889999999999999999999999999999641 22111111111 122348
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCCC
Q psy6127 444 LEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~ 514 (515)
.++.+||||++|+++--|++|+||-+++-+....+.| |.-||.++..+||+++++|||.| ++||-++.+.
T Consensus 512 L~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYG-HkLPV~smDIS~DSklivTgSADKnVKiWGLdFGD 583 (888)
T KOG0306|consen 512 LCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYG-HKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGD 583 (888)
T ss_pred EEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecc-cccceeEEeccCCcCeEEeccCCCceEEeccccch
Confidence 9999999999999999999999999999999999998 99999999999999999999866 9999988753
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=266.95 Aligned_cols=264 Identities=17% Similarity=0.297 Sum_probs=227.7
Q ss_pred eCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCC-CceeEEEEe
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKK-YGVDLIKFT 272 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~ 272 (515)
+++..+-..+|+. ..+.....++.|..+|+++.|+++|.+++||+.+|.|++|+.. ...++.+..|. ..|++++|+
T Consensus 113 tgs~SGEFtLWNg--~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn-mnnVk~~~ahh~eaIRdlafS 189 (464)
T KOG0284|consen 113 TGSQSGEFTLWNG--TSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN-MNNVKIIQAHHAEAIRDLAFS 189 (464)
T ss_pred eecccccEEEecC--ceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc-hhhhHHhhHhhhhhhheeccC
Confidence 5666677889984 4444445678999999999999999999999999999999976 44445555554 899999999
Q ss_pred cCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCe
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNK 351 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~ 351 (515)
|....++.++ .||+|+|||....+....+.+|.-.|.+++|+|...++++||.|..|++||.+++.++.++. +...+
T Consensus 190 pnDskF~t~S--dDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntV 267 (464)
T KOG0284|consen 190 PNDSKFLTCS--DDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTV 267 (464)
T ss_pred CCCceeEEec--CCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceE
Confidence 9887776665 79999999999999989999999999999999999999999999999999999999999884 45568
Q ss_pred eEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCcee
Q psy6127 352 PIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGNCV 430 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~ 430 (515)
..+.|+|++++|++++.|..+++||+++.+ .+....+|...++++.|+| ....|.+|+.||.|..|.+...+++
T Consensus 268 l~~~f~~n~N~Llt~skD~~~kv~DiR~mk-----El~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~ 342 (464)
T KOG0284|consen 268 LAVKFNPNGNWLLTGSKDQSCKVFDIRTMK-----ELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPL 342 (464)
T ss_pred EEEEEcCCCCeeEEccCCceEEEEehhHhH-----HHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccc
Confidence 899999999999999999999999999654 6666778999999999999 5568889999999999998855555
Q ss_pred EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 431 QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
..+. ..+...|++++|+|-|.+|++|+.|.++++|..
T Consensus 343 ~~i~--~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 343 GEIP--PAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cCCC--cccccceeeeeccccceeEeecCCCcceeeecc
Confidence 4443 235556999999999999999999999999975
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=281.48 Aligned_cols=281 Identities=24% Similarity=0.393 Sum_probs=235.3
Q ss_pred eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE--eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC-
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR--VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDC- 250 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~--~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~- 250 (515)
.+.++.|.++... + .+++.+.++++|+ ....+ +.+.+.+|...|.+++|+||++++++|+.|++++|||+
T Consensus 161 sv~~~~fs~~g~~----l-~~~~~~~~i~~~~--~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~ 233 (456)
T KOG0266|consen 161 SVTCVDFSPDGRA----L-AAASSDGLIRIWK--LEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK 233 (456)
T ss_pred ceEEEEEcCCCCe----E-EEccCCCcEEEee--cccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeecc
Confidence 3555555544432 2 3677788899998 44555 77888999999999999999999999999999999999
Q ss_pred CCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy6127 251 EQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKT 330 (515)
Q Consensus 251 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~ 330 (515)
..+..++++.+|...|++++|+|+++.++.+ +.|++|++||++++++...+.+|.+.|++++|+++++.|++++.|+.
T Consensus 234 ~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sg--s~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~ 311 (456)
T KOG0266|consen 234 DDGRNLKTLKGHSTYVTSVAFSPDGNLLVSG--SDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGT 311 (456)
T ss_pred CCCeEEEEecCCCCceEEEEecCCCCEEEEe--cCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCcc
Confidence 5568999999999999999999999655544 58999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCC--eEEEEecC-C--CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc---CeEEEE
Q psy6127 331 VRVWDLRQPN--NVGMIQLS-G--NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC---EWTGLK 402 (515)
Q Consensus 331 i~iwd~~~~~--~~~~~~~~-~--~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---~i~~l~ 402 (515)
|++||+.++. +...+... . .+.++.|+|++.++++++.|+.+++||++... .......|.. .+.+..
T Consensus 312 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~-----~~~~~~~~~~~~~~~~~~~ 386 (456)
T KOG0266|consen 312 IRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGK-----SVGTYTGHSNLVRCIFSPT 386 (456)
T ss_pred EEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCc-----ceeeecccCCcceeEeccc
Confidence 9999999999 45555322 2 46899999999999999999999999999765 2222222222 445566
Q ss_pred EcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe--CCCcEEEEECC
Q psy6127 403 FSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS--TDGQVHIWNAE 470 (515)
Q Consensus 403 ~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs--~dg~I~iwd~~ 470 (515)
.++.+.++++|+.|+.|++||..++..+..+.+|. ...+..+.++|..+++++++ .|+.+++|..+
T Consensus 387 ~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~--~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 387 LSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS--KAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCC--CCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 68899999999999999999999998888888874 44489999999999999998 78999999764
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=259.05 Aligned_cols=287 Identities=26% Similarity=0.401 Sum_probs=245.4
Q ss_pred cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCe
Q psy6127 165 LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQ 244 (515)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~ 244 (515)
+.++.+|...+.++.+.+... +.++++.++.+.+|+ ....+....+.+|...+.++.|+|+++++++++.||.
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~-----~l~~~~~~g~i~i~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 74 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGK-----LLATGSGDGTIKVWD--LETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKT 74 (289)
T ss_pred chHhcccCCCEEEEEEcCCCC-----EEEEeecCcEEEEEE--eeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCe
Confidence 346677877788888877532 233566688999998 7777778888999999999999999999999999999
Q ss_pred EEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEE
Q psy6127 245 IIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFIS 324 (515)
Q Consensus 245 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s 324 (515)
|++||+.+++....+..|...+.++.|++++..++.+ +.++.+.+||+.+++....+..|...+.+++|+|++.++++
T Consensus 75 i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 152 (289)
T cd00200 75 IRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSS--SRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVAS 152 (289)
T ss_pred EEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEe--cCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEE
Confidence 9999999888888899999899999999996544433 36999999999999999999999999999999999889988
Q ss_pred EeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEE
Q psy6127 325 GSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF 403 (515)
Q Consensus 325 ~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~ 403 (515)
++.|+.|++||+++++....+..+ ..+.++.|+|+++.+++++.++.+++||++... .......+...+.+++|
T Consensus 153 ~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~-----~~~~~~~~~~~i~~~~~ 227 (289)
T cd00200 153 SSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK-----CLGTLRGHENGVNSVAF 227 (289)
T ss_pred EcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCc-----eecchhhcCCceEEEEE
Confidence 888999999999988887777544 468999999999999999999999999998743 33333356668999999
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 404 sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
+|++.++++++.++.+++||+.+++....+..+ ...+.+++|+|+++++++++.||.+++|+
T Consensus 228 ~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 228 SPDGYLLASGSEDGTIRVWDLRTGECVQTLSGH---TNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cCCCcEEEEEcCCCcEEEEEcCCceeEEEcccc---CCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 999888888888999999999998888887754 34599999999999999999999999996
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=274.86 Aligned_cols=287 Identities=20% Similarity=0.273 Sum_probs=242.8
Q ss_pred ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy6127 168 LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIII 247 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~i 247 (515)
++.....+-.++|.|..+.+.. +--.+.|.+|| .+.+.++..|.+|.++|..++|+|++.+++||++|-.|++
T Consensus 5 fEskSsRvKglsFHP~rPwILt-----slHsG~IQlWD--YRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkV 77 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILT-----SLHSGVIQLWD--YRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKV 77 (1202)
T ss_pred hhcccccccceecCCCCCEEEE-----eecCceeeeeh--hhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEE
Confidence 4444445677788877765543 44457899999 8999999999999999999999999999999999999999
Q ss_pred EECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC
Q psy6127 248 YDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY 327 (515)
Q Consensus 248 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~ 327 (515)
|+.++.+++.++.+|-+-|..+.|++..+.++.+| .|.+|+||+..+++++..+.||...|.|..|+|....++++|-
T Consensus 78 WnYk~rrclftL~GHlDYVRt~~FHheyPWIlSAS--DDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSL 155 (1202)
T KOG0292|consen 78 WNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSAS--DDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASL 155 (1202)
T ss_pred EecccceehhhhccccceeEEeeccCCCceEEEcc--CCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecc
Confidence 99999999999999999999999999999998876 7999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCC---------------------------eEE--EE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEe
Q psy6127 328 DKTVRVWDLRQPN---------------------------NVG--MI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377 (515)
Q Consensus 328 dg~i~iwd~~~~~---------------------------~~~--~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~ 377 (515)
|.+|++||+..-+ .+- .+ .|...++-++|+|.-..+++|+.|..|++|.+
T Consensus 156 DQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrm 235 (1202)
T KOG0292|consen 156 DQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 235 (1202)
T ss_pred cceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEe
Confidence 9999999985211 111 11 23445888999999999999999999999998
Q ss_pred ecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
...+ .-......+|...|+++-|+|..+.+++.++|++|++||+...+.++++.... ...+.++-+|..+++++
T Consensus 236 netK---aWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrren---dRFW~laahP~lNLfAA 309 (1202)
T KOG0292|consen 236 NETK---AWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRREN---DRFWILAAHPELNLFAA 309 (1202)
T ss_pred cccc---ceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccC---CeEEEEEecCCcceeee
Confidence 7633 12344456888999999999999999999999999999999999998887533 33789999999998887
Q ss_pred EeCCCcEEEEECC
Q psy6127 458 GSTDGQVHIWNAE 470 (515)
Q Consensus 458 gs~dg~I~iwd~~ 470 (515)
|-+.| +.||.++
T Consensus 310 gHDsG-m~VFkle 321 (1202)
T KOG0292|consen 310 GHDSG-MIVFKLE 321 (1202)
T ss_pred ecCCc-eEEEEEc
Confidence 75444 5555554
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=238.76 Aligned_cols=276 Identities=18% Similarity=0.281 Sum_probs=242.1
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
+.+++|.+.|.+++|+-+|..|++|+.|+++++|+++..+.... ..+|.+.|..++|.|..+-++... +.|.+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~ata-s~dk~ir~w 92 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATA-SGDKTIRIW 92 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEe-cCCceEEEE
Confidence 56789999999999999999999999999999999987755443 468889999999998766554443 469999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcE
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSI 372 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i 372 (515)
|++++++........+. .-+.|+|+|++++.++.|..|.+.|.++.+.+...+....+.-++|+.++++++.....|+|
T Consensus 93 d~r~~k~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v 171 (313)
T KOG1407|consen 93 DIRSGKCTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCV 171 (313)
T ss_pred EeccCcEEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceE
Confidence 99999999887644444 45889999999999999999999999999999888888778899999888888888888999
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
.|......+ .......|.....+|.|+|+|+|+|+|+.|..+.+||+...-|++.+..+ ..+|..+.|+.||
T Consensus 172 ~ILsypsLk-----pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRl---dwpVRTlSFS~dg 243 (313)
T KOG1407|consen 172 EILSYPSLK-----PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRL---DWPVRTLSFSHDG 243 (313)
T ss_pred EEEeccccc-----cccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccc---cCceEEEEeccCc
Confidence 998877543 45555678888889999999999999999999999999999898888764 4459999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 453 QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
++||+|++|..|-|=++++|..+..++ +.++...++|+|...+||.+.
T Consensus 244 ~~lASaSEDh~IDIA~vetGd~~~eI~--~~~~t~tVAWHPk~~LLAyA~ 291 (313)
T KOG1407|consen 244 RMLASASEDHFIDIAEVETGDRVWEIP--CEGPTFTVAWHPKRPLLAYAC 291 (313)
T ss_pred ceeeccCccceEEeEecccCCeEEEee--ccCCceeEEecCCCceeeEEe
Confidence 999999999999999999999999997 889999999999999999875
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=266.91 Aligned_cols=280 Identities=19% Similarity=0.299 Sum_probs=250.4
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
.+++..|+..|.++.|+|...+++++-.+|.|.|||.++...++.+....-+|++..|-+..+.+++++ .|..|+||+
T Consensus 6 krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~Gs--DD~~IrVfn 83 (794)
T KOG0276|consen 6 KRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGS--DDMQIRVFN 83 (794)
T ss_pred hhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEec--CCceEEEEe
Confidence 356777999999999999999999999999999999999999999999999999999999998888765 799999999
Q ss_pred CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-CeEEEE-ecCCCeeEEEECC-CCCEEEEEECCC
Q psy6127 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP-NNVGMI-QLSGNKPIAAYDP-EGLAFAIGVNSD 370 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~-~~~~~~~~~~~s~-~~~~l~~g~~dg 370 (515)
..+++.+..|..|.+.|.+++.+|..++++++|.|-+|++||.+.+ .+.+++ .|.+-+..++|.| |.+.+++++-|+
T Consensus 84 ynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDr 163 (794)
T KOG0276|consen 84 YNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDR 163 (794)
T ss_pred cccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccc
Confidence 9999999999999999999999999999999999999999999875 455666 4445689999999 678999999999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC--CEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG--KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~--~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
+|++|.+.+.. +.....+|...|+++.+-|.| .+|++|+.|.++++||..+..|++++.+|.+. |..+.|
T Consensus 164 TVKVWslgs~~-----~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~N---vs~v~f 235 (794)
T KOG0276|consen 164 TVKVWSLGSPH-----PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNN---VSFVFF 235 (794)
T ss_pred cEEEEEcCCCC-----CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhccccc---ceEEEe
Confidence 99999998754 333445888999999998854 69999999999999999999999999998776 899999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
+|.-.++++|++||+++||+..+-+....+.- .-+.|++++-.+.+..++.|...
T Consensus 236 hp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~-gleRvW~I~~~k~~~~i~vG~De 290 (794)
T KOG0276|consen 236 HPELPIIISGSEDGTVRIWNSKTYKLEKTLNY-GLERVWCIAAHKGDGKIAVGFDE 290 (794)
T ss_pred cCCCcEEEEecCCccEEEecCcceehhhhhhc-CCceEEEEeecCCCCeEEEeccC
Confidence 99999999999999999999999888888876 66789999999877777777543
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=239.45 Aligned_cols=294 Identities=17% Similarity=0.232 Sum_probs=245.8
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
..+..+++|...++.+.|.|... +.++++.|..|.+|+.. ..-+-..++++|+++|..+.|.+|++.++++|.|
T Consensus 38 ap~m~l~gh~geI~~~~F~P~gs-----~~aSgG~Dr~I~LWnv~-gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtD 111 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHPDGS-----CFASGGSDRAIVLWNVY-GDCENFWVLKGHSGAVMELHGMRDGSHILSCGTD 111 (338)
T ss_pred chhhhcCCCcceEEEEEECCCCC-----eEeecCCcceEEEEecc-ccccceeeeccccceeEeeeeccCCCEEEEecCC
Confidence 34556788888899999988432 33488888889999721 2223456788999999999999999999999999
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
.+|+.||+++|+..+.+++|..-|+.+.-+.-|..+ +.+++.|+++++||+++...++++. ..-+++++.|..++..+
T Consensus 112 k~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~l-v~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv 189 (338)
T KOG0265|consen 112 KTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQL-VCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQV 189 (338)
T ss_pred ceEEEEecccceeeehhccccceeeecCccccCCeE-EEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccce
Confidence 999999999999999999999999999955555554 4566899999999999999888875 45679999999999999
Q ss_pred EEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC--C--CcC
Q psy6127 323 ISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE--R--GCE 397 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~--~--~~~ 397 (515)
.+|+-|+.|++||++.+.....+ .+...+..+..+|+|.++.+-+.|.++++||++....... ++....+ | ...
T Consensus 190 ~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R-~v~if~g~~hnfekn 268 (338)
T KOG0265|consen 190 ISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQR-CVKIFQGHIHNFEKN 268 (338)
T ss_pred eeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCc-eEEEeecchhhhhhh
Confidence 99999999999999999998888 4556799999999999999999999999999997543322 1222111 2 223
Q ss_pred eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
....+|+|++..+.+|+.|..+++||......+..+.+|.+. |.+++|+|...++.+++.|.+|++=.
T Consensus 269 lL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gs---vn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 269 LLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGS---VNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred cceeeccCCCCccccccccceEEEeecccccEEEEcCCccee---EEEeeecCCCcEEEEeccCceeEeec
Confidence 457899999999999999999999999888899999987665 99999999999999999999998743
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=256.07 Aligned_cols=274 Identities=17% Similarity=0.258 Sum_probs=229.6
Q ss_pred eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG 253 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~ 253 (515)
.|+++.++... + .|+..|.+|++|| .....|.+.+.||++.|.|+.| |.+.+++||.|.+|++||+++|
T Consensus 199 gVYClQYDD~k------i-VSGlrDnTikiWD--~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 199 GVYCLQYDDEK------I-VSGLRDNTIKIWD--KNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred ceEEEEecchh------h-hcccccCceEEec--cccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCC
Confidence 48888887765 3 3899999999999 8899999999999999999999 4669999999999999999999
Q ss_pred eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee---eEEecCCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy6127 254 TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY---VRYFPGHVRKVSSLNLSPVDDSFISGSYDKT 330 (515)
Q Consensus 254 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~ 330 (515)
+++.++-.|...|..+.|+.. +++ +++.|.++.+||+..... .+.+.||...|+.+.|+ .+++++++.|.+
T Consensus 268 e~l~tlihHceaVLhlrf~ng--~mv--tcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRT 341 (499)
T KOG0281|consen 268 EPLNTLIHHCEAVLHLRFSNG--YMV--TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRT 341 (499)
T ss_pred chhhHHhhhcceeEEEEEeCC--EEE--EecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCce
Confidence 999999999999999999753 344 446899999999987643 35678999999999998 679999999999
Q ss_pred EEEEEcCCCCeEEEEecCC-CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCE
Q psy6127 331 VRVWDLRQPNNVGMIQLSG-NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKL 409 (515)
Q Consensus 331 i~iwd~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~ 409 (515)
|++|++.++++++++..+. .+.|+ --.++++++|+.|.+|++||+..+. .+....+|..-|.++.| |.+.
T Consensus 342 ikvW~~st~efvRtl~gHkRGIACl--QYr~rlvVSGSSDntIRlwdi~~G~-----cLRvLeGHEeLvRciRF--d~kr 412 (499)
T KOG0281|consen 342 IKVWSTSTCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDIECGA-----CLRVLEGHEELVRCIRF--DNKR 412 (499)
T ss_pred EEEEeccceeeehhhhcccccceeh--hccCeEEEecCCCceEEEEeccccH-----HHHHHhchHHhhhheee--cCce
Confidence 9999999999999985543 34444 4478999999999999999999986 77778899999999999 6679
Q ss_pred EEEEECCCcEEEEECCCCceeEEee------ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE
Q psy6127 410 ILVSTNGSIIRLFDAFNGNCVQSLS------GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV 475 (515)
Q Consensus 410 l~~~s~dg~i~iwd~~~~~~~~~~~------~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~ 475 (515)
+++|+.||+|++||+..+...+... ....+.+.|..+.|. ...+++++.|.+|-|||..++.+-
T Consensus 413 IVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 413 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred eeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEcCCCCcc
Confidence 9999999999999998764332111 112234458888885 667888999999999999877554
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=259.21 Aligned_cols=288 Identities=23% Similarity=0.339 Sum_probs=248.8
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
++...+..|.+.|..+.|-++...|++|+.|..|++|++..++ .+.++.+..++++.+.|.+++.+.+.++ .|+.+
T Consensus 166 ~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas--~d~~~ 243 (459)
T KOG0288|consen 166 RALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAAS--NDKNL 243 (459)
T ss_pred hhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeec--CCCce
Confidence 4556788999999999999998999999999999999998666 6677888889999999999999887775 79999
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
++|++.+.+...++.+|++.|+++.|......+++|+.|.+|++||+....|.++.-.......++.+ +..+++|-.|
T Consensus 244 r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~SgH~D 321 (459)
T KOG0288|consen 244 RLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCS--ISDVISGHFD 321 (459)
T ss_pred eeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEec--ceeeeecccc
Confidence 99999999999999999999999999987777999999999999999999998887666666666665 5678889999
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc-CCCCCEEEEE
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN-NNASPLEATF 448 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~ 448 (515)
++|++||.++... .... +-.+.|+++..++++..+++++.|.++.+.|+++......+..... .....+.+.|
T Consensus 322 kkvRfwD~Rs~~~-----~~sv-~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvf 395 (459)
T KOG0288|consen 322 KKVRFWDIRSADK-----TRSV-PLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVF 395 (459)
T ss_pred cceEEEeccCCce-----eeEe-ecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEE
Confidence 9999999998652 2221 2334899999999999999999999999999999888777654321 1223788999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCC-CeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPS-AVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~-~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
||++.|+++|+.||.|+||++.++++...+...+.. .|++++|+|.|..+++++.+ +++|.
T Consensus 396 Spd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 396 SPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred CCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 999999999999999999999999999999875555 69999999999999999966 88883
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=270.45 Aligned_cols=292 Identities=14% Similarity=0.245 Sum_probs=253.1
Q ss_pred eccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
.|...+..|..++|+|...+++++-..|.|++||.+-+.++..+..|.++|..++|+|+.+.++ ||+.|-.|+||+..
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFV--SGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFV--SGGDDYKIKVWNYK 81 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEE--ecCCccEEEEEecc
Confidence 3566778999999999999999999999999999999999999999999999999999998555 44689999999999
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEE
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKL 374 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i 374 (515)
+.+++.++.||-+.|..+.|++.-.+++++|.|.+|+||+..+++++..+. |.+-+.|..|+|....++++|-|.+|++
T Consensus 82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRV 161 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRV 161 (1202)
T ss_pred cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEE
Confidence 999999999999999999999999999999999999999999999999984 4566999999999999999999999999
Q ss_pred EEeecCCCCCce------------------------eeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcee
Q psy6127 375 YDVRSYDKGPFA------------------------SFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV 430 (515)
Q Consensus 375 ~d~~~~~~~~~~------------------------~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~ 430 (515)
||+...++.... ......+|...|+-++|+|.-..+++|+.|..|++|.+...+.
T Consensus 162 WDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa- 240 (1202)
T KOG0292|consen 162 WDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA- 240 (1202)
T ss_pred EeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc-
Confidence 998753321111 1122467888999999999999999999999999999865543
Q ss_pred EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC-EEEEc
Q psy6127 431 QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN-MAFWI 509 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d-v~iW~ 509 (515)
.......+|...|.++-|+|...++++.++|++|+|||+...+.+.+++. ..+..+.++-+|..+++|+|-.. +.|+.
T Consensus 241 WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr-endRFW~laahP~lNLfAAgHDsGm~VFk 319 (1202)
T KOG0292|consen 241 WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR-ENDRFWILAAHPELNLFAAGHDSGMIVFK 319 (1202)
T ss_pred eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeec-cCCeEEEEEecCCcceeeeecCCceEEEE
Confidence 23333334445599999999999999999999999999999999999987 56789999999999999988643 66776
Q ss_pred CC
Q psy6127 510 PT 511 (515)
Q Consensus 510 ~~ 511 (515)
++
T Consensus 320 le 321 (1202)
T KOG0292|consen 320 LE 321 (1202)
T ss_pred Ec
Confidence 65
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=231.83 Aligned_cols=283 Identities=17% Similarity=0.256 Sum_probs=238.7
Q ss_pred eccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
.++||..+++.+.|+.+|.+|.+|+.|.+..+|-..+|+.+.++.+|.+.|+|+....+.+.+++++ .|.++++||++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGS--AD~t~kLWDv~ 82 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGS--ADQTAKLWDVE 82 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeecc--ccceeEEEEcC
Confidence 3789999999999999999999999999999999989999999999999999999999998888766 69999999999
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEcC-------CCCeEEEE-ecCCCeeEEEECCCCCE
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-----DKTVRVWDLR-------QPNNVGMI-QLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-----dg~i~iwd~~-------~~~~~~~~-~~~~~~~~~~~s~~~~~ 362 (515)
+|+++..++ ...+|..+.|+++|++++.... .+.|.++|++ ..++...+ .....+..+.|.|-+..
T Consensus 83 tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ 161 (327)
T KOG0643|consen 83 TGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGET 161 (327)
T ss_pred CCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCE
Confidence 999999987 5688999999999998776654 3679999998 44545555 44566889999999999
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCC
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
|++|..+|.|..||++++. ........|...|+.++++||..++++++.|.+.++||..+-++++++... .+
T Consensus 162 ii~Ghe~G~is~~da~~g~----~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te----~P 233 (327)
T KOG0643|consen 162 IIAGHEDGSISIYDARTGK----ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTE----RP 233 (327)
T ss_pred EEEecCCCcEEEEEcccCc----eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeec----cc
Confidence 9999999999999999875 244445678889999999999999999999999999999999999998853 44
Q ss_pred CEEEEEecCCCEEEEEeCCCc--E------------EEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EE
Q psy6127 443 PLEATFTPDSQFVASGSTDGQ--V------------HIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MA 506 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~--I------------~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~ 506 (515)
+++.+++|-..+++.|+.... | ++|++-..+.+....+ |-++|++++|+|+|+..++|+.| +|
T Consensus 234 vN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkG-HFGPINsvAfhPdGksYsSGGEDG~VR 312 (327)
T KOG0643|consen 234 VNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKG-HFGPINSVAFHPDGKSYSSGGEDGYVR 312 (327)
T ss_pred ccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccc-cccCcceeEECCCCcccccCCCCceEE
Confidence 899999998877776653321 2 2222222345666777 99999999999999999999977 66
Q ss_pred EEcC
Q psy6127 507 FWIP 510 (515)
Q Consensus 507 iW~~ 510 (515)
+.-.
T Consensus 313 ~h~F 316 (327)
T KOG0643|consen 313 LHHF 316 (327)
T ss_pred EEEe
Confidence 6543
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=239.53 Aligned_cols=293 Identities=16% Similarity=0.275 Sum_probs=246.0
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
.-+.+|..|++.|.+++.+|+.+++|||+.|..-.+|++.++.....+.+|...|+++.|+.++.+++ +|+.+|.|+|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLA--TGdmsG~v~v 132 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLA--TGDMSGKVLV 132 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEE--ecCCCccEEE
Confidence 34577999999999999999999999999999999999999999999999999999999999998665 4568999999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCC
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg 370 (515)
|+..++.....+....+.+.-+.|+|.+..|+.|+.||.+..|.+.++...+.+ .+..+.++=.|.|+|+.++++..||
T Consensus 133 ~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dg 212 (399)
T KOG0296|consen 133 FKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDG 212 (399)
T ss_pred EEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCc
Confidence 999999998888777788999999999999999999999999999997666666 4556678889999999999999999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec--------cccCCCC
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG--------VLNNNAS 442 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~ 442 (515)
+|++|+..++. +...+ .........++.++..+..++.|+.++.+++-+..+|+.+....+ +......
T Consensus 213 ti~~Wn~ktg~--p~~~~--~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~es 288 (399)
T KOG0296|consen 213 TIIVWNPKTGQ--PLHKI--TQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDES 288 (399)
T ss_pred eEEEEecCCCc--eeEEe--cccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhh
Confidence 99999999875 22222 222244556889999999999999999999999888887766652 2222233
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee--CCEEEEcCCCC
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC--SNMAFWIPTLS 513 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~--~dv~iW~~~~~ 513 (515)
|-.+.++..=++.|+|+-||+|.|||+...++...++ |..+|+.+.|.+ ..+|++++ +.++.||..++
T Consensus 289 ve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~--he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG 358 (399)
T KOG0296|consen 289 VESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE--HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTG 358 (399)
T ss_pred hhhcccccccchhhcccccceEEEEecccchhheecc--CCCceEEEEEcC-cchheeeccCceEEeeecccc
Confidence 5555666667889999999999999999888888776 889999999999 45566655 55999998764
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=246.55 Aligned_cols=282 Identities=18% Similarity=0.324 Sum_probs=247.2
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEe--------cCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI--------NSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
|....+-|..|||||+||++||.||.|.+||..+|+..+.+ -.+..+|.|+.|+.|...++ +|+.||.|+
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlA--sGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLA--SGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhh--ccCcCCcEE
Confidence 55677899999999999999999999999999999876654 34678999999999987655 556899999
Q ss_pred EEECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEEC
Q psy6127 291 YLSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 291 vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~ 368 (515)
+|.+++|.+++.|. .|+..|+|+.|+.|+..+++++.|.++++.-+++|++++.+.. ..-++...|.++|..+++++.
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSs 368 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASS 368 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecC
Confidence 99999999999996 8999999999999999999999999999999999999998854 455889999999999999999
Q ss_pred CCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
||+|++|+..+.+ +... +.+...+|.++..-| +...++++...+++++.++ .|+.++.+.......+...+
T Consensus 369 DgtvkvW~~Ktte-----C~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~ 442 (508)
T KOG0275|consen 369 DGTVKVWHGKTTE-----CLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFIN 442 (508)
T ss_pred CccEEEecCcchh-----hhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEE
Confidence 9999999998865 2222 234566788888877 4568888999999999996 68888888876666667888
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 446 ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 446 ~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
++.+|.|.++++.++|+.++.+.+.+|++..++.. |...|..++-+|..+.+|+-+.| +++|.
T Consensus 443 ~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~V-hEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 443 AILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPV-HEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EEecCCCcEEEEEccCcEEEEEEeecCceeeeeec-ccccccccccCcccchhhhhcccchhhhcC
Confidence 99999999999999999999999999999999988 99999999999999999998876 78885
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=248.72 Aligned_cols=293 Identities=17% Similarity=0.255 Sum_probs=237.5
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEcccee-eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV-RSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~-~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
+.-+.+..|...|..+.|.+.... || |++.|.+..+|.-.. ...++.+++.||..+|..+.||||.++|++|+.
T Consensus 215 qt~qil~~htdEVWfl~FS~nGky----LA-saSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~ 289 (519)
T KOG0293|consen 215 QTWQILQDHTDEVWFLQFSHNGKY----LA-SASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF 289 (519)
T ss_pred hhhhhHhhCCCcEEEEEEcCCCee----Ee-eccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc
Confidence 344567788777877777655431 44 788888888886211 126778999999999999999999999999999
Q ss_pred CCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC-CCeEEEEEcCCC
Q psy6127 242 DDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV-RKVSSLNLSPVD 319 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~ 319 (515)
|..+++||+.+|.....+.. +...+.+++|.|||..+++++ .|+++..||++.. .....++-. ..|.+++..+||
T Consensus 290 ~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs--~dr~i~~wdlDgn-~~~~W~gvr~~~v~dlait~Dg 366 (519)
T KOG0293|consen 290 DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGS--PDRTIIMWDLDGN-ILGNWEGVRDPKVHDLAITYDG 366 (519)
T ss_pred hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecC--CCCcEEEecCCcc-hhhcccccccceeEEEEEcCCC
Confidence 99999999999998887753 478899999999999977664 7999999998744 344444432 569999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCC--cC
Q psy6127 320 DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERG--CE 397 (515)
Q Consensus 320 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~~ 397 (515)
+++++.+.|..|++++.++.........+.++++.++|.+++++++.-.+..+++||++... ......+|. .-
T Consensus 367 k~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~-----lv~kY~Ghkq~~f 441 (519)
T KOG0293|consen 367 KYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENK-----LVRKYFGHKQGHF 441 (519)
T ss_pred cEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhh-----HHHHhhcccccce
Confidence 99999999999999999988888777888889999999999999999999999999998533 111112222 23
Q ss_pred eEEEEEcC-CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCC
Q psy6127 398 WTGLKFSP-DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 398 i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~ 471 (515)
+..-||-- +..++++|++|+.|+||+..+|+++..+.+|... |++++|+|.. .++|++++||+|+||-...
T Consensus 442 iIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~---vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 442 IIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKT---VNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred EEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcce---eeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 34556654 5579999999999999999999999999997655 9999999965 5889999999999998754
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=237.24 Aligned_cols=285 Identities=22% Similarity=0.333 Sum_probs=245.8
Q ss_pred eeeccccCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 214 AKVFRENTDKINSLDYSS---DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~sp---d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
..+..||+.+|..++||| +|-+|++++.|+.-.+-+-++|.-+.++.+|.+.|+....+.+....+.+ +.|-+.+
T Consensus 7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasa--aadftak 84 (334)
T KOG0278|consen 7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASA--AADFTAK 84 (334)
T ss_pred ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhh--cccchhh
Confidence 356789999999999987 89999999999999999999999999999999999999888776555544 4699999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-EEE-ecCCCeeEEEECCCCCEEEEEEC
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-GMI-QLSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~-~~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
+||.-+|..+..|. |..-|.+++|+.|.++|++|+.+..+++||++..+.. ..+ .+.+.+..+.|....+.+++.+.
T Consensus 85 vw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSad 163 (334)
T KOG0278|consen 85 VWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSAD 163 (334)
T ss_pred hhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeecc
Confidence 99999999999986 9999999999999999999999999999999876543 233 56677999999999999999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
|++||+||.+++.. .+. -....+|+++.++++|+++.++ ..+.|.+||..+...++.+....+ |.+...
T Consensus 164 d~tVRLWD~rTgt~-----v~s-L~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~n----V~SASL 232 (334)
T KOG0278|consen 164 DKTVRLWDHRTGTE-----VQS-LEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPCN----VESASL 232 (334)
T ss_pred CCceEEEEeccCcE-----EEE-EecCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCccc----cccccc
Confidence 99999999999752 221 1234578899999999877654 557899999999988888775433 889999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
+|+...+++|++|..++.||..+|+.+..+..+|.++|.|+.|+|||..-|+|+.| +++|....
T Consensus 233 ~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 233 HPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred cCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecC
Confidence 99999999999999999999999999998733499999999999999999999865 99998653
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=269.11 Aligned_cols=253 Identities=23% Similarity=0.409 Sum_probs=212.0
Q ss_pred eeecc-ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------------------------------C-------
Q psy6127 214 AKVFR-ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ--------------------------------G------- 253 (515)
Q Consensus 214 ~~~~~-~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~--------------------------------~------- 253 (515)
.+.+. +|.+.|+++.||+||+|||+||.||.|+||.+.. .
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 35566 9999999999999999999999999999998755 0
Q ss_pred ---------------------eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEE
Q psy6127 254 ---------------------TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSS 312 (515)
Q Consensus 254 ---------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 312 (515)
++...+.+|.+.|..+.|+.++ +|+.+ +.|.+|++|++...+++..|. |.+.|+|
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSS--SMDKTVRLWh~~~~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSS--SMDKTVRLWHPGRKECLKVFS-HNDFVTC 414 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEec--cccccEEeecCCCcceeeEEe-cCCeeEE
Confidence 1222357899999999999876 34433 589999999999999999997 9999999
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC
Q psy6127 313 LNLSP-VDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391 (515)
Q Consensus 313 l~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~ 391 (515)
++|+| |.++|++|+-||.|+||++...+.+.-.....-|++++|.|+|+..++|+.+|.+++|+....+......+...
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 99999 56799999999999999999998888888888899999999999999999999999999887543222222211
Q ss_pred ---CCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 392 ---GERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 392 ---~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
......|+++.|.|.. ..+++.+.|..|+|||.++.+.+..++++.+... -....|+.||++|+++++|..|++|
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~S-Q~~Asfs~Dgk~IVs~seDs~VYiW 573 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSS-QISASFSSDGKHIVSASEDSWVYIW 573 (712)
T ss_pred cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCc-ceeeeEccCCCEEEEeecCceEEEE
Confidence 1222379999999844 4688889999999999999999999998876655 4678899999999999999999999
Q ss_pred ECCC
Q psy6127 468 NAER 471 (515)
Q Consensus 468 d~~~ 471 (515)
+.+.
T Consensus 574 ~~~~ 577 (712)
T KOG0283|consen 574 KNDS 577 (712)
T ss_pred eCCC
Confidence 9844
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=256.98 Aligned_cols=353 Identities=18% Similarity=0.255 Sum_probs=282.5
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
|++ .|...|++ .+|++.+++.+.+++++...+.++...|-.... .-+-.++.|.+.+ ++..+
T Consensus 174 KIv-vGs~~G~l----------ql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVV-----aiG~~~G~ViifN--lK~dk 235 (910)
T KOG1539|consen 174 KIV-VGSSQGRL----------QLWNVRTGKVVYTFQEFFSRITAIEQSPALDVV-----AIGLENGTVIIFN--LKFDK 235 (910)
T ss_pred eEE-EeecCCcE----------EEEEeccCcEEEEecccccceeEeccCCcceEE-----EEeccCceEEEEE--cccCc
Confidence 555 88999999 999999999999999998778888887776544 3456678888888 88899
Q ss_pred eeeeccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeeeeEec-CCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 213 VAKVFRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTIN-SKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+.+|+.-.++|++++|..||+ .||+|+..|.+.+||++..+....+. .|.+.+....|.|....++.++ .|+.++
T Consensus 236 il~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~--~DnSlk 313 (910)
T KOG1539|consen 236 ILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAG--ADNSLK 313 (910)
T ss_pred EEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeecc--CCCcee
Confidence 9999987789999999999996 56777778999999999887776665 7889999999999988777665 578877
Q ss_pred EEECCCC----eeeEEecCCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEcC----------------------------
Q psy6127 291 YLSLHDN----KYVRYFPGHVRKVSSLNLS-PVDDSFISGSYDKTVRVWDLR---------------------------- 337 (515)
Q Consensus 291 vwd~~~~----~~~~~~~~h~~~v~~l~~~-~~~~~l~s~s~dg~i~iwd~~---------------------------- 337 (515)
+|=.+++ +.++.-.||..+..++.|. .+|..+.+++.|++.+.+++.
T Consensus 314 ~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~ 393 (910)
T KOG1539|consen 314 VWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKL 393 (910)
T ss_pred EEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhh
Confidence 7765543 3456667999999999998 567788888888887777651
Q ss_pred -------------------------------------CCCe-EEEEecC------CCeeEEEECCCCCEEEEEECCCcEE
Q psy6127 338 -------------------------------------QPNN-VGMIQLS------GNKPIAAYDPEGLAFAIGVNSDSIK 373 (515)
Q Consensus 338 -------------------------------------~~~~-~~~~~~~------~~~~~~~~s~~~~~l~~g~~dg~i~ 373 (515)
+... ...+... ..+.+++.++.|++.+.|+..|.|.
T Consensus 394 k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id 473 (910)
T KOG1539|consen 394 KLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTID 473 (910)
T ss_pred cCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEE
Confidence 1000 0111111 3467889999999999999999999
Q ss_pred EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee-------------------
Q psy6127 374 LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS------------------- 434 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~------------------- 434 (515)
+|+++++-.. ..+.....|..+|++++...-++.+++++.+|.+++||..+......+.
T Consensus 474 ~fNmQSGi~r--~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~ 551 (910)
T KOG1539|consen 474 RFNMQSGIHR--KSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAI 551 (910)
T ss_pred EEEcccCeee--cccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhh
Confidence 9999986421 1222235789999999999999999999999999999987654332221
Q ss_pred -------------------ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCC
Q psy6127 435 -------------------GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKY 495 (515)
Q Consensus 435 -------------------~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~ 495 (515)
...++...|++++|||||++|++++.|++|++||+.++.++..+. -..+.+++.|+|+|
T Consensus 552 ~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~--vd~~~~sls~SPng 629 (910)
T KOG1539|consen 552 ALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL--VDSPCTSLSFSPNG 629 (910)
T ss_pred hcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe--cCCcceeeEECCCC
Confidence 112345569999999999999999999999999999999999886 56789999999999
Q ss_pred CEEEEeeCC---EEEEc
Q psy6127 496 HMLASACSN---MAFWI 509 (515)
Q Consensus 496 ~~las~~~d---v~iW~ 509 (515)
.+||++..+ +.+|.
T Consensus 630 D~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 630 DFLATVHVDQNGIYLWS 646 (910)
T ss_pred CEEEEEEecCceEEEEE
Confidence 999998744 88995
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-31 Score=247.54 Aligned_cols=290 Identities=18% Similarity=0.311 Sum_probs=229.4
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee----eeEe-cCCCCceeEEEEecCCCeEEEEEeeC
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS----KNTI-NSKKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~----~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
+.+-..+++|+..|.++++.|.|..|++||.|.+|++||...... .+.+ ......|.+++|++.++.+++++|
T Consensus 157 ~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg-- 234 (641)
T KOG0772|consen 157 GSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSG-- 234 (641)
T ss_pred ccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEec--
Confidence 445567899999999999999999999999999999999874321 1222 334567999999999999999985
Q ss_pred CCeEEEEECCCCeeeEE------------ecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCe-EEEEec----
Q psy6127 286 DATLRYLSLHDNKYVRY------------FPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNN-VGMIQL---- 347 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~------------~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~-~~~~~~---- 347 (515)
....+++|-...+.... -+||...++|.+|+|+.+ .+++++.||++++||+...+. ...+.+
T Consensus 235 ~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~ 314 (641)
T KOG0772|consen 235 SAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG 314 (641)
T ss_pred CcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCC
Confidence 77888888654433222 368999999999999876 799999999999999986543 333322
Q ss_pred --CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy6127 348 --SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF 425 (515)
Q Consensus 348 --~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~ 425 (515)
.-++..++|+|+|++||+|..||.|.+|+.+.....+...+.........|+++.||++|++|++-+.|+++++||++
T Consensus 315 g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 315 GKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred CcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence 124678999999999999999999999998776555544444333334489999999999999999999999999998
Q ss_pred CCc-eeEEeeccccCCCCCEEEEEecCCCEEEEEeC------CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEE
Q psy6127 426 NGN-CVQSLSGVLNNNASPLEATFTPDSQFVASGST------DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHML 498 (515)
Q Consensus 426 ~~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 498 (515)
..+ ++....+.. ...+-+.++|||+.++|++|+. .|.+.+||..+-..+..+.- ....|..+.|+|.-+.+
T Consensus 395 q~kkpL~~~tgL~-t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i-~~aSvv~~~WhpkLNQi 472 (641)
T KOG0772|consen 395 QFKKPLNVRTGLP-TPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDI-STASVVRCLWHPKLNQI 472 (641)
T ss_pred ccccchhhhcCCC-ccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecC-CCceEEEEeecchhhhe
Confidence 764 444444433 2334688999999999999863 47899999999999999987 67889999999977766
Q ss_pred EEeeCC
Q psy6127 499 ASACSN 504 (515)
Q Consensus 499 as~~~d 504 (515)
..+++|
T Consensus 473 ~~gsgd 478 (641)
T KOG0772|consen 473 FAGSGD 478 (641)
T ss_pred eeecCC
Confidence 666655
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=221.71 Aligned_cols=285 Identities=15% Similarity=0.194 Sum_probs=237.1
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
.+..+..+...+.++.|+...+ .+.++..|.++++|+ ...+.+++++.||..+|..++.+.|+..+++|+.|.
T Consensus 9 r~~~l~~~qgaV~avryN~dGn-----Y~ltcGsdrtvrLWN--p~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk 81 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGN-----YCLTCGSDRTVRLWN--PLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDK 81 (307)
T ss_pred hceeecccccceEEEEEccCCC-----EEEEcCCCceEEeec--ccccceeeeecCCCceeeeccccccccccccCCCCc
Confidence 4556677777788888876554 455788899999999 888999999999999999999999999999999999
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC--eeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN--KYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
.+.+||+.+|+..+.+.+|.+.|+.++|+.+... +++|+.|.++++||-++. ++++.+....+.|.++..+ +..
T Consensus 82 ~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSV--v~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~he 157 (307)
T KOG0316|consen 82 AVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSV--VASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHE 157 (307)
T ss_pred eEEEEEcccCeeeeecccccceeeEEEecCcceE--EEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccE
Confidence 9999999999999999999999999999988764 445569999999998754 6788898889999999998 678
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCe--E
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW--T 399 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i--~ 399 (515)
|++|+.||+++.||++.|+....+ ..+++++++|+++++..++++-|+++++.|-.+++ .+....+|...- .
T Consensus 158 IvaGS~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGk-----lL~sYkGhkn~eykl 231 (307)
T KOG0316|consen 158 IVAGSVDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGK-----LLKSYKGHKNMEYKL 231 (307)
T ss_pred EEeeccCCcEEEEEeecceeehhh-cCCcceeEEecCCCCEEEEeeccceeeecccchhH-----HHHHhcccccceeee
Confidence 999999999999999999766554 34569999999999999999999999999998876 333333333221 2
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
..+++.....+++|++||.+++||+.+...+..+..+.... +.+++++|.-..++++. ++.+..|-
T Consensus 232 dc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~--v~dl~~hp~~~~f~~A~-~~~~~~~~ 297 (307)
T KOG0316|consen 232 DCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVI--VTDLSCHPTMDDFITAT-GHGDLFWY 297 (307)
T ss_pred eeeecccceeEEeccCCceEEEEEeccceeeeeeccCCcee--EEeeecccCccceeEec-CCceecee
Confidence 56677777899999999999999999999888877644322 78999999877777765 34456664
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=231.19 Aligned_cols=294 Identities=18% Similarity=0.283 Sum_probs=246.4
Q ss_pred ccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy6127 166 SSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQI 245 (515)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i 245 (515)
.++.||.-.|+.+.|.+-.+....-++.+-++....+--+ ++.-+.+|.||.+.|++...+.+...-|+++.|-+-
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~----tgdwigtfeghkgavw~~~l~~na~~aasaaadfta 83 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGD----TGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTA 83 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCC----CCCcEEeeeccCcceeeeecCchhhhhhhhcccchh
Confidence 4677886667777777776665554554555555555433 456678999999999999999999999999999999
Q ss_pred EEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe-eeEEecCCCCCeEEEEEcCCCCEEEE
Q psy6127 246 IIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK-YVRYFPGHVRKVSSLNLSPVDDSFIS 324 (515)
Q Consensus 246 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~s 324 (515)
++||.-+|..+..+. |..-|.+++|+.|.+++++++ .+..+++||++..+ +...+.+|++.|..+.|....+.|++
T Consensus 84 kvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg--~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLS 160 (334)
T KOG0278|consen 84 KVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGG--QEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILS 160 (334)
T ss_pred hhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccc--hHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEe
Confidence 999999999998886 777899999999999888664 79999999997754 55778899999999999999999999
Q ss_pred EeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEc
Q psy6127 325 GSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFS 404 (515)
Q Consensus 325 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~s 404 (515)
++.|++||+||.+++..++.+..+.++.++.++++|+++.++ ..+.|.+||..+.. .++. ..-...|.+..++
T Consensus 161 Sadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~-----~lKs-~k~P~nV~SASL~ 233 (334)
T KOG0278|consen 161 SADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFG-----LLKS-YKMPCNVESASLH 233 (334)
T ss_pred eccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEe-cCceeEEecccccc-----ceee-ccCcccccccccc
Confidence 999999999999999999999999999999999999988776 56789999998854 2221 1233467899999
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE
Q psy6127 405 PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV 475 (515)
Q Consensus 405 p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~ 475 (515)
|+...+++|++|..++.||..+|..+..+ ..++.++|.++.|+|+|...++|++||+|++|....++..
T Consensus 234 P~k~~fVaGged~~~~kfDy~TgeEi~~~--nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 234 PKKEFFVAGGEDFKVYKFDYNTGEEIGSY--NKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred CCCceEEecCcceEEEEEeccCCceeeec--ccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 99999999999999999999999887775 2345566999999999999999999999999998766543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-29 Score=273.02 Aligned_cols=305 Identities=12% Similarity=0.110 Sum_probs=232.4
Q ss_pred CCcchhhcccccc-----ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEcccee--eee----EeeeeccccCCc
Q psy6127 155 GSWDFELLHSLSS-----LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV--RSY----RVAKVFRENTDK 223 (515)
Q Consensus 155 ~~wd~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~--~~~----~~~~~~~~h~~~ 223 (515)
++|+..+...... +..|...+.+++|.+... +.++++.|+.+++|+... ... .+...+. +...
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~-----~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 534 (793)
T PLN00181 461 KYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGE-----FFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSK 534 (793)
T ss_pred hhhcccceEEEEeeccccccCCCCcEEEEEECCCCC-----EEEEEeCCCEEEEEECCcccccccccccceEEec-ccCc
Confidence 5566665443332 334555678888876543 334778899999998321 011 1122333 3468
Q ss_pred EEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEec-CCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 224 INSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTH-SKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 224 I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
|.+++|+| ++.+||+++.||+|++||+.+++.+..+.+|...|.+++|+| ++..++++ +.|++|++||+.++..+.
T Consensus 535 v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sg--s~Dg~v~iWd~~~~~~~~ 612 (793)
T PLN00181 535 LSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASG--SDDGSVKLWSINQGVSIG 612 (793)
T ss_pred eeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEE--cCCCEEEEEECCCCcEEE
Confidence 99999988 578999999999999999999999999999999999999997 55555544 479999999999999888
Q ss_pred EecCCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEcCCCC-eEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 302 YFPGHVRKVSSLNLS-PVDDSFISGSYDKTVRVWDLRQPN-NVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~-~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
.+..+ ..+.++.|+ +++..|++|+.||.|++||+++++ ....+ .+...+..+.|. ++..+++++.|++|++||++
T Consensus 613 ~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 613 TIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLS 690 (793)
T ss_pred EEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence 88754 679999995 568899999999999999998765 34444 455678899997 78899999999999999997
Q ss_pred cCCCC-CceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec----------cccCCCCCEEEE
Q psy6127 379 SYDKG-PFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG----------VLNNNASPLEAT 447 (515)
Q Consensus 379 ~~~~~-~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~----------~~~~~~~i~~~~ 447 (515)
..... ....+....+|...+..++|+|++.+|++|+.|+.|++|+......+..+.. ...+...|.+++
T Consensus 691 ~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ 770 (793)
T PLN00181 691 MSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVC 770 (793)
T ss_pred CCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEE
Confidence 53211 0112333456777888999999999999999999999999876654433221 112234589999
Q ss_pred EecCCCEEEEEeCCCcEEEEEC
Q psy6127 448 FTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 448 ~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
|+|++..|++|+.||.|+||++
T Consensus 771 ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 771 WRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EcCCCCeEEEecCCCcEEEEec
Confidence 9999999999999999999986
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=244.76 Aligned_cols=289 Identities=21% Similarity=0.334 Sum_probs=243.0
Q ss_pred ccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy6127 166 SSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQI 245 (515)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i 245 (515)
..+..|.+.+-.+.|.++.. ..++++.|..|++|+........+.++.|..++|++++|.++++.+++++.|+.+
T Consensus 169 ~~ld~h~gev~~v~~l~~sd-----tlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~ 243 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSD-----TLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNL 243 (459)
T ss_pred hhhhccccccceeEEccCcc-----hhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCce
Confidence 34556666666666666532 2247888899999995555556888999999999999999999999999999999
Q ss_pred EEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEE
Q psy6127 246 IIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISG 325 (515)
Q Consensus 246 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~ 325 (515)
++|++...+...++.+|.+.|+++.|...... +++|+.|.+++.||+....+.+++. ..+.+.++..+ ...+++|
T Consensus 244 r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~--vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~~Sg 318 (459)
T KOG0288|consen 244 RLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSR--VVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--ISDVISG 318 (459)
T ss_pred eeeeccchhhhhhhcccccceeeehhhccccc--eeeccccchhhhhhhhhhheecccc-ccccccceEec--ceeeeec
Confidence 99999999999999999999999999988766 4455689999999999988887764 34556777776 5678999
Q ss_pred eCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC-CCCCcCeEEEEEc
Q psy6127 326 SYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP-GERGCEWTGLKFS 404 (515)
Q Consensus 326 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~i~~l~~s 404 (515)
-.|++|++||.++..+....+.++.+.++..++++..+.+++.|.++.++|+++.+.. ..+... ....+.++.+.||
T Consensus 319 H~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~--~~~sA~g~k~asDwtrvvfS 396 (459)
T KOG0288|consen 319 HFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIR--QTFSAEGFKCASDWTRVVFS 396 (459)
T ss_pred ccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEE--EEeeccccccccccceeEEC
Confidence 9999999999999999999999999999999999999999999999999999986522 122211 1223348899999
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 405 PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 405 p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
|++.|+++|+.||.|+||++.++++...+.....+ ..|++++|+|.|..+++++.++.+.+|
T Consensus 397 pd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~-~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 397 PDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN-AAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred CCCceeeeccCCCcEEEEEccCceEEEEeccCCCC-cceEEEEEcCCCchhhcccCCcceEec
Confidence 99999999999999999999999999888765433 259999999999999999999999999
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-30 Score=226.46 Aligned_cols=277 Identities=17% Similarity=0.215 Sum_probs=228.5
Q ss_pred cccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-Ceee-eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 218 RENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQ-GTSK-NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 218 ~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
....+.|.+++||| ...+++.+|.||+||+|+++. |... +....|.++|.+++|+.+|..+++++ .|+.+++||+
T Consensus 24 ~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~--~Dk~~k~wDL 101 (347)
T KOG0647|consen 24 NPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGG--CDKQAKLWDL 101 (347)
T ss_pred CCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeec--cCCceEEEEc
Confidence 45678999999999 556777999999999999986 3332 44567899999999999998877765 5999999999
Q ss_pred CCCeeeEEecCCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcE
Q psy6127 295 HDNKYVRYFPGHVRKVSSLNLSPVDD--SFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSI 372 (515)
Q Consensus 295 ~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i 372 (515)
.+++ +..+..|.++|..+.|-+... .|++||.|.+|+.||.+....+.++..++.+.++.. ....++++..+..|
T Consensus 102 ~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv--~~pm~vVata~r~i 178 (347)
T KOG0647|consen 102 ASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADV--LYPMAVVATAERHI 178 (347)
T ss_pred cCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhc--cCceeEEEecCCcE
Confidence 9995 555677999999999988766 899999999999999999999999988876665443 45678888999999
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC--ceeEEeecccc------CCCCCE
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG--NCVQSLSGVLN------NNASPL 444 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~--~~~~~~~~~~~------~~~~i~ 444 (515)
.+|++++..... ......-...+++++..+|....+.|+-+|.+.+..+..+ +.-.+++.|.. ....|+
T Consensus 179 ~vynL~n~~te~---k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVN 255 (347)
T KOG0647|consen 179 AVYNLENPPTEF---KRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVN 255 (347)
T ss_pred EEEEcCCCcchh---hhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEec
Confidence 999998754221 1112334556889999998888899999999999998876 44455666653 134678
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 445 EATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
+++|+|.-..|++++.||+..+||-+....+...+. |..+|++.+|+.+|.++|.+.+
T Consensus 256 si~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~-~~qpItcc~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 256 SIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSET-HPQPITCCSFNRNGSIFAYALG 313 (347)
T ss_pred ceEeecccceEEEecCCceEEEecchhhhhhhccCc-CCCccceeEecCCCCEEEEEee
Confidence 999999999999999999999999988888888877 9999999999999999998753
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-30 Score=257.48 Aligned_cols=281 Identities=20% Similarity=0.328 Sum_probs=236.3
Q ss_pred eeeCCCCcEEEEccceeeeeEeeee-ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEE
Q psy6127 192 AHSRSSRTITKCSENLVRSYRVAKV-FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 192 ~~s~~~~~~i~~wd~~~~~~~~~~~-~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 270 (515)
..+++.+.++++|+ ...+..+.+ +.||.+.|.+++|..-+.+|++|+.|.++++||..+|++...+.+|...+.++.
T Consensus 221 ~~~~s~~~tl~~~~--~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~ 298 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWD--LNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLT 298 (537)
T ss_pred EEecCCCceeEEee--cccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEE
Confidence 34788889999999 667777777 999999999999988788999999999999999999999999999999999988
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCC
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSG 349 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~ 349 (515)
..+. ...+|+.|.+|++|++.++..+..+.+|.++|.++..+ +..+++|+.|++|++||+.+++++..+. |..
T Consensus 299 ~~~~----~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~ 372 (537)
T KOG0274|consen 299 IDPF----LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTG 372 (537)
T ss_pred ccCc----eEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcc
Confidence 7553 34456789999999999999999999999999999999 8899999999999999999999999984 445
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC 429 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 429 (515)
.+.++.+.+. ..+++|+.|++|++||+++.. .+.....+|...+..+.+ .+++|++++.|++|++||..++++
T Consensus 373 ~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~----~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~ 445 (537)
T KOG0274|consen 373 RVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR----KCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGEC 445 (537)
T ss_pred eEEEEEecCc-ceEEeeeeccceEeecCCchh----hhhhhhcCCccccccccc--ccceeEeccccccEEEeecccCce
Confidence 6778877665 899999999999999999863 256666777777755554 677999999999999999999999
Q ss_pred eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEE
Q psy6127 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQF 491 (515)
Q Consensus 430 ~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 491 (515)
++.+.+. +...+..+++. ...+++++.||.+++||++++++...+..........+++
T Consensus 446 ~~~~~~~--~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~~~~~~~~~~~~~ 503 (537)
T KOG0274|consen 446 LRTLEGR--HVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTLLSTDLGATWGVAP 503 (537)
T ss_pred eeeeccC--CcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhhhhccccccccccc
Confidence 9999885 33336777665 4678888999999999999999888774422233334443
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=233.53 Aligned_cols=267 Identities=19% Similarity=0.277 Sum_probs=225.7
Q ss_pred eeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCC---CEEEEEeCCCeEEEEECCCCee----eeEecCCC
Q psy6127 191 LAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDG---SLLISCSDDDQIIIYDCEQGTS----KNTINSKK 263 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~---~~lasgs~dg~i~iwd~~~~~~----~~~~~~~~ 263 (515)
-.++++-|+++++|+. .+++.+++.||.++|.+++|.-.. ..|+++|.|.++++|..+.++. .....+|.
T Consensus 117 ~IltgsYDg~~riWd~---~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk 193 (423)
T KOG0313|consen 117 WILTGSYDGTSRIWDL---KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHK 193 (423)
T ss_pred eEEEeecCCeeEEEec---CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccc
Confidence 3358999999999974 489999999999999988885433 3699999999999999887643 33345999
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCC-------------------------CeeeEEecCCCCCeEEEEEcCC
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD-------------------------NKYVRYFPGHVRKVSSLNLSPV 318 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-------------------------~~~~~~~~~h~~~v~~l~~~~~ 318 (515)
..|.+++..+++..++.+ +.|..+.+|+..+ +.++.++.||+.+|.++.|++
T Consensus 194 ~~V~sVsv~~sgtr~~Sg--S~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d- 270 (423)
T KOG0313|consen 194 RSVDSVSVDSSGTRFCSG--SWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD- 270 (423)
T ss_pred cceeEEEecCCCCeEEee--cccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-
Confidence 999999999999877655 5899999999321 234667889999999999998
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCe
Q psy6127 319 DDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398 (515)
Q Consensus 319 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (515)
...+++++.|.+|+.||+.++..+..+..+....++.++|..++|++|+.|..+++||.+++.... ......+|...|
T Consensus 271 ~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~--v~~s~~gH~nwV 348 (423)
T KOG0313|consen 271 ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSV--VSQSLIGHKNWV 348 (423)
T ss_pred CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCce--eEEeeecchhhh
Confidence 778999999999999999999999999888889999999999999999999999999999875332 222345777899
Q ss_pred EEEEEcCCCC-EEEEEECCCcEEEEECCCCc-eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 399 TGLKFSPDGK-LILVSTNGSIIRLFDAFNGN-CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 399 ~~l~~sp~~~-~l~~~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
.++.|+|... .|++++.|+++++||+++.+ ++..+.+|. ..|.++.|+ ++..+++|+.|++++|+..
T Consensus 349 ssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~---DKvl~vdW~-~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 349 SSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHN---DKVLSVDWN-EGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred hheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCC---ceEEEEecc-CCceEEeccCcceEEEecc
Confidence 9999999654 67789999999999999887 888888764 449999998 4678999999999999864
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=224.22 Aligned_cols=288 Identities=16% Similarity=0.197 Sum_probs=232.6
Q ss_pred ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy6127 168 LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIII 247 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~i 247 (515)
++||.-....+.++.... |.|+++.|.+..+|- ..+++.+-++.||++.|+|++.+-+.+.+++|+.|.++++
T Consensus 6 l~GHERplTqiKyN~eGD-----LlFscaKD~~~~vw~--s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGD-----LLFSCAKDSTPTVWY--SLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred cccCccccceEEecCCCc-----EEEEecCCCCceEEE--ecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 567766677777775544 778999999999997 5688999999999999999999999999999999999999
Q ss_pred EECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe---eCCCeEEEEECC-------CCeeeEEecCCCCCeEEEEEcC
Q psy6127 248 YDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST---KVDATLRYLSLH-------DNKYVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 248 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~---~~d~~v~vwd~~-------~~~~~~~~~~h~~~v~~l~~~~ 317 (515)
||+++|+++..++.. .+|..+.|+++|+.+++.+- +..+.|.++|++ ..++...+..+.+.++.+-|.|
T Consensus 79 WDv~tGk~la~~k~~-~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~ 157 (327)
T KOG0643|consen 79 WDVETGKQLATWKTN-SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP 157 (327)
T ss_pred EEcCCCcEEEEeecC-CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc
Confidence 999999999998865 68999999999998777652 235679999987 4566788888999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCC
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
-++.|++|..||.|..||+++++....- .+...++.+.++|+..++++++.|.+-++||+++.. .++. ....
T Consensus 158 l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~-----v~Kt-y~te 231 (327)
T KOG0643|consen 158 LGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE-----VLKT-YTTE 231 (327)
T ss_pred cCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecccee-----eEEE-eeec
Confidence 9999999999999999999998654433 455679999999999999999999999999999854 2222 2345
Q ss_pred cCeEEEEEcCCCCEEEEEECCCc--EEEEECCCCc------------eeEEeeccccCCCCCEEEEEecCCCEEEEEeCC
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGSI--IRLFDAFNGN------------CVQSLSGVLNNNASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg~--i~iwd~~~~~------------~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d 461 (515)
.++++.+++|....++.|+.... |.--+.+.|+ .+..+++ |-++|++++|+|+|+..++|++|
T Consensus 232 ~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkG---HFGPINsvAfhPdGksYsSGGED 308 (327)
T KOG0643|consen 232 RPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKG---HFGPINSVAFHPDGKSYSSGGED 308 (327)
T ss_pred ccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccc---cccCcceeEECCCCcccccCCCC
Confidence 68899999998777777653221 2222223332 2233344 45569999999999999999999
Q ss_pred CcEEEEECCCC
Q psy6127 462 GQVHIWNAERG 472 (515)
Q Consensus 462 g~I~iwd~~~~ 472 (515)
|.|++...+..
T Consensus 309 G~VR~h~Fd~~ 319 (327)
T KOG0643|consen 309 GYVRLHHFDSN 319 (327)
T ss_pred ceEEEEEeccc
Confidence 99999866543
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=236.79 Aligned_cols=278 Identities=21% Similarity=0.318 Sum_probs=238.1
Q ss_pred eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeee--------ccccCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKV--------FRENTDKINSLDYSSDGSLLISCSDDDQI 245 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~--------~~~h~~~I~~l~~spd~~~lasgs~dg~i 245 (515)
.+..++++++. |+ +++-|+.+.+|+ .-+++..+. |--|.++|.|+.||.|...||+|+.||.|
T Consensus 217 EcA~FSPDgqy------Lv-sgSvDGFiEVWn--y~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkI 287 (508)
T KOG0275|consen 217 ECARFSPDGQY------LV-SGSVDGFIEVWN--YTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKI 287 (508)
T ss_pred hheeeCCCCce------Ee-eccccceeeeeh--hccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcE
Confidence 35666666665 44 899999999999 666666544 34578999999999999999999999999
Q ss_pred EEEECCCCeeeeEec-CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEE
Q psy6127 246 IIYDCEQGTSKNTIN-SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFIS 324 (515)
Q Consensus 246 ~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s 324 (515)
++|.+.+|.+++.+. .|...|+|+.|+.|+..++.++ .|.++++.-+.+|+++..++||.+.|+...|.+||..+++
T Consensus 288 KvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~s--fD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iis 365 (508)
T KOG0275|consen 288 KVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSAS--FDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIIS 365 (508)
T ss_pred EEEEEecchHHHHhhhhhccCeeEEEEccCcchhhccc--ccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEE
Confidence 999999999999997 8999999999999999888765 8999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEEcCCCCeEEEEecC---CCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEE
Q psy6127 325 GSYDKTVRVWDLRQPNNVGMIQLS---GNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTG 400 (515)
Q Consensus 325 ~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~ 400 (515)
++.||+|++|+.++.+|+.++... -++..+-.-| +...++++...+++.+.++... ..+.+..-....+...+
T Consensus 366 aSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQ---vVrsfsSGkREgGdFi~ 442 (508)
T KOG0275|consen 366 ASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQ---VVRSFSSGKREGGDFIN 442 (508)
T ss_pred ecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccce---EEeeeccCCccCCceEE
Confidence 999999999999999999988543 3455555555 5677888889999999988752 22233333344556668
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 401 LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 401 l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
.+.||.|.++++.++|+.++.|.+.+|+..+++..|... +..++-+|..+.+|+-++||.+++|.
T Consensus 443 ~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkd---vIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 443 AILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKD---VIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EEecCCCcEEEEEccCcEEEEEEeecCceeeeeeccccc---ccccccCcccchhhhhcccchhhhcC
Confidence 899999999999999999999999999999999886655 78899999999999999999999995
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=224.24 Aligned_cols=292 Identities=16% Similarity=0.246 Sum_probs=226.7
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEe--cCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTI--NSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~--~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+++||.+.|++++|+.||++|||++.|++|++|++++-... +.+ +..-+..+.+.|+||-..+++... ...+++
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~-~g~~l~ 158 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVK-RGNKLC 158 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEc-cCCEEE
Confidence 568999999999999999999999999999999999863211 111 112245788999999988887764 678899
Q ss_pred EEECCCCe---ee---------EEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEEC
Q psy6127 291 YLSLHDNK---YV---------RYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYD 357 (515)
Q Consensus 291 vwd~~~~~---~~---------~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s 357 (515)
+|.+...+ .. ..-+.|.-.+..+-....+.+|++++.|..|.+|+++ |+.+..+... ......++|
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavS 237 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVS 237 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeC
Confidence 99864322 11 1113466677778888888899999999999999999 8888877544 335678999
Q ss_pred CCCCEEEEEECCCcEEEEEeecCCCCCcee---eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC----C---
Q psy6127 358 PEGLAFAIGVNSDSIKLYDVRSYDKGPFAS---FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN----G--- 427 (515)
Q Consensus 358 ~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~---~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~----~--- 427 (515)
|+|+++++++..-.+++|.+--.+...++. .....+|.+.|..++|+|+...+++.+.||++++||+.- +
T Consensus 238 P~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDp 317 (420)
T KOG2096|consen 238 PDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDP 317 (420)
T ss_pred CCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCc
Confidence 999999999999999999987655444333 233678999999999999999999999999999999752 1
Q ss_pred ceeEEee-ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC-E
Q psy6127 428 NCVQSLS-GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN-M 505 (515)
Q Consensus 428 ~~~~~~~-~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d-v 505 (515)
+.++... ......+....+..+|+|+.||.+ ....++++..++|+....++..|...|.+++|+++|+++++++.. +
T Consensus 318 k~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~v 396 (420)
T KOG2096|consen 318 KILKEGSAPLHAAGSEPVRLELSPSGDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDRYV 396 (420)
T ss_pred hHhhcCCcchhhcCCCceEEEeCCCCcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecceee
Confidence 2222221 111122335689999999998876 456799999999999888888899999999999999999998754 6
Q ss_pred EEEc
Q psy6127 506 AFWI 509 (515)
Q Consensus 506 ~iW~ 509 (515)
++..
T Consensus 397 rv~~ 400 (420)
T KOG2096|consen 397 RVIR 400 (420)
T ss_pred eeec
Confidence 6654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=230.46 Aligned_cols=277 Identities=20% Similarity=0.317 Sum_probs=224.2
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCe-EEEEEeeCCCeEEEEECCCC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTT-AIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~s~~~d~~v~vwd~~~~ 297 (515)
-|.+.|.++... ++++++|+.||.+++||.. |+....+.+|.+++..++|.-.... -.+++++.|.++++|.++.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 589999999887 6799999999999999976 9999999999999998888644333 22334468999999998877
Q ss_pred eee----EEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-------------------------CCeEEEE-ec
Q psy6127 298 KYV----RYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ-------------------------PNNVGMI-QL 347 (515)
Q Consensus 298 ~~~----~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~-------------------------~~~~~~~-~~ 347 (515)
+.. ....||...|.++...++|..+++|+.|.++++|+..+ +.++..+ .|
T Consensus 180 ~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GH 259 (423)
T KOG0313|consen 180 ENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGH 259 (423)
T ss_pred hhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccc
Confidence 543 34459999999999999999999999999999999321 1122233 34
Q ss_pred CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy6127 348 SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 348 ~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~ 427 (515)
..++..+.|++ ...+++++.|.+|+.||+.++... . .......+.++..+|..++|++|+.|..+++||.+++
T Consensus 260 t~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~-----~-~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~ 332 (423)
T KOG0313|consen 260 TEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLK-----S-TLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG 332 (423)
T ss_pred ccceeeEEEcC-CCceEeecccceEEEEEeecccce-----e-eeecCcceeEeecccccceeeecCCCCceeecCCCCC
Confidence 56688899998 778899999999999999986521 1 1233456889999999999999999999999999987
Q ss_pred ce---eEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCe-EEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 428 NC---VQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNAERGY-KVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 428 ~~---~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
.- ..++.+|.+ .|.++.|+|.. ..|++|+.||++++||+++.+ ++..+.+ |.+.|.++.|+.. ..+++|+
T Consensus 333 ~gs~v~~s~~gH~n---wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~-h~DKvl~vdW~~~-~~IvSGG 407 (423)
T KOG0313|consen 333 DGSVVSQSLIGHKN---WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG-HNDKVLSVDWNEG-GLIVSGG 407 (423)
T ss_pred CCceeEEeeecchh---hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeecc-CCceEEEEeccCC-ceEEecc
Confidence 53 345555544 59999999976 467899999999999999887 9999988 9999999999864 5788888
Q ss_pred CC--EEEEcC
Q psy6127 503 SN--MAFWIP 510 (515)
Q Consensus 503 ~d--v~iW~~ 510 (515)
.| ++|+.-
T Consensus 408 aD~~l~i~~~ 417 (423)
T KOG0313|consen 408 ADNKLRIFKG 417 (423)
T ss_pred CcceEEEecc
Confidence 66 777653
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=226.48 Aligned_cols=290 Identities=22% Similarity=0.352 Sum_probs=238.8
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------------C------eeeeEecCCCCceeEEEEecCCC
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ------------G------TSKNTINSKKYGVDLIKFTHSKT 276 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~------------~------~~~~~~~~~~~~v~~~~~~~~~~ 276 (515)
..+..|++++.+.+|+|||.++|+||.|..|+|.|++. + -.++++-.|..+|+++.|+|...
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 45778999999999999999999999999999999861 1 23567778999999999999987
Q ss_pred eEEEEEeeCCCeEEEEECCCCeeeEEec--CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE----ecCCC
Q psy6127 277 TAIHASTKVDATLRYLSLHDNKYVRYFP--GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI----QLSGN 350 (515)
Q Consensus 277 ~l~~~s~~~d~~v~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~ 350 (515)
.++. ++.|++|+++|+......+.++ ....+|.++.|+|.|.+|+.|..-.++++||+++.++...- ++.+.
T Consensus 186 ILiS--~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~a 263 (430)
T KOG0640|consen 186 ILIS--GSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGA 263 (430)
T ss_pred eEEe--ccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccc
Confidence 6554 4589999999997654332222 24578999999999999999999999999999998886554 45567
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
++++.+++.+++.++++.||.|++||--+.+ ++.. ..+....|.+..|..+|+|+++.+.|..+++|.+.+++
T Consensus 264 i~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r-----Cv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R 338 (430)
T KOG0640|consen 264 ITQVRYSSTGSLYVTASKDGAIKLWDGVSNR-----CVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGR 338 (430)
T ss_pred eeEEEecCCccEEEEeccCCcEEeeccccHH-----HHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCc
Confidence 9999999999999999999999999976644 3332 23446689999999999999999999999999999999
Q ss_pred eeEEeecccc--CCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC-
Q psy6127 429 CVQSLSGVLN--NNASPLEATFTPDSQFVASGS-TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN- 504 (515)
Q Consensus 429 ~~~~~~~~~~--~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d- 504 (515)
++..+.+... ....-+...|+....+++.-. ..+.+.-||.+++..+..+..+|.+.+..+.-+|.+..+.+++.|
T Consensus 339 ~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~ 418 (430)
T KOG0640|consen 339 MLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDF 418 (430)
T ss_pred eEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccc
Confidence 9998876422 111234567887777877665 346799999999988877776799999999999999999999987
Q ss_pred -EEEEcCC
Q psy6127 505 -MAFWIPT 511 (515)
Q Consensus 505 -v~iW~~~ 511 (515)
.|+|--.
T Consensus 419 raRFWyrr 426 (430)
T KOG0640|consen 419 RARFWYRR 426 (430)
T ss_pred eeeeeeec
Confidence 8889644
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=231.47 Aligned_cols=279 Identities=19% Similarity=0.272 Sum_probs=245.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
..|.++...|....+++|+.|.++.++|...++.+..+++|...|+.+.|+|+....+.++ .|..|++|.........
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aS--ad~~i~vws~~~~s~~~ 297 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITAS--ADEIIRVWSVPLSSEPT 297 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecC--CcceEEeeccccccCcc
Confidence 5788888888878999999999999999999999999999999999999999998777776 69999999998888888
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC---CeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG---NKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
....|..+|+.+..+|.|.+|++++.|++..+.|++++..+....... ...+.+|+|||..|.+|..||.+++||+.
T Consensus 298 ~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 298 SSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred ccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcC
Confidence 888999999999999999999999999999999999999988776542 37889999999999999999999999999
Q ss_pred cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE
Q psy6127 379 SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG 458 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg 458 (515)
++. ......+|.++|..++|+.+|-||+++++|+.|++||++..+..+++...... .+.++.|.+.|.+|+.+
T Consensus 378 s~~-----~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~--~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 378 SQT-----NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK--EVNSLSFDQSGTYLGIA 450 (506)
T ss_pred Ccc-----ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccc--cceeEEEcCCCCeEEee
Confidence 865 44445679999999999999999999999999999999998877777654332 58999999999999999
Q ss_pred eCCCcEEEEECC--CCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 459 STDGQVHIWNAE--RGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 459 s~dg~I~iwd~~--~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
+.|=.|++++-. +..++..+.. |.+..+++.|....+++++++.+ ++++.+
T Consensus 451 g~~l~Vy~~~k~~k~W~~~~~~~~-~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 451 GSDLQVYICKKKTKSWTEIKELAD-HSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred cceeEEEEEecccccceeeehhhh-cccccceeeecccceEEeeccchhheEEeec
Confidence 877666666633 5567777776 88999999999999999999866 666654
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-29 Score=233.28 Aligned_cols=296 Identities=23% Similarity=0.322 Sum_probs=243.2
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCC
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGS 234 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~ 234 (515)
+-|+-.+..++. +. ++.+.+++|.|..+.. ++.+++-+ +.+.+ ..+....+++.-..+.|.++.|-.||+
T Consensus 12 ~~w~~~~~~~~~--ke-~~~vssl~fsp~~P~d---~aVt~S~r--vqly~--~~~~~~~k~~srFk~~v~s~~fR~DG~ 81 (487)
T KOG0310|consen 12 RYWRQETFPPVH--KE-HNSVSSLCFSPKHPYD---FAVTSSVR--VQLYS--SVTRSVRKTFSRFKDVVYSVDFRSDGR 81 (487)
T ss_pred hhhhhhcccccc--cc-cCcceeEecCCCCCCc---eEEecccE--EEEEe--cchhhhhhhHHhhccceeEEEeecCCe
Confidence 667766555443 22 3346677777655433 44344333 44444 444555666777889999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEE
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLN 314 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~ 314 (515)
+||.|...|.|+|+|.++...++.+..|+.++..+.|+|+++.+++. |+.|+.+++||+.+......+.+|++.|.|.+
T Consensus 82 LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s-~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~ 160 (487)
T KOG0310|consen 82 LLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVS-GSDDKVVKYWDLSTAYVQAELSGHTDYVRCGD 160 (487)
T ss_pred EEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEe-cCCCceEEEEEcCCcEEEEEecCCcceeEeec
Confidence 99999999999999987777888999999999999999998876654 46899999999999987778999999999999
Q ss_pred EcCCCC-EEEEEeCCCcEEEEEcCCC-CeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCC
Q psy6127 315 LSPVDD-SFISGSYDKTVRVWDLRQP-NNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 315 ~~~~~~-~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
|+|... .++|||.||+|++||++.. ..+..+.+..++..+.+-|.|..+++++ ...+++||+-++.+ .+....
T Consensus 161 ~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~q----ll~~~~ 235 (487)
T KOG0310|consen 161 ISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQ----LLTSMF 235 (487)
T ss_pred cccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCce----ehhhhh
Confidence 999765 8999999999999999988 7788899999999999999999999875 56899999997662 333344
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
.|...|+|+++..++..|++++-|+.+++||+.+.+.+..+. ..++|.+++.+|+++.++.|..||.+.+=+..
T Consensus 236 ~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~----~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~ 309 (487)
T KOG0310|consen 236 NHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK----YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE 309 (487)
T ss_pred cccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee----cccceeeEEecCCCceEEEecccceeeeehhh
Confidence 588899999999999999999999999999998888888776 34459999999999999999999988776443
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-28 Score=242.60 Aligned_cols=283 Identities=15% Similarity=0.201 Sum_probs=210.5
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-------------eEecCCCCceeEEEEec-CCCeEEEEEeeC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-------------NTINSKKYGVDLIKFTH-SKTTAIHASTKV 285 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~-------------~~~~~~~~~v~~~~~~~-~~~~l~~~s~~~ 285 (515)
|-..|.....++|+..+++++.+.....|+...+..+ ..+.+|.+.|.+++|+| ++..++++ +.
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSg--S~ 96 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTA--SE 96 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEE--eC
Confidence 3345566667777767777777777777775433221 24678999999999999 66655544 47
Q ss_pred CCeEEEEECCCC-------eeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEE
Q psy6127 286 DATLRYLSLHDN-------KYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAY 356 (515)
Q Consensus 286 d~~v~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~ 356 (515)
|++|++||+.++ +++..+.+|...|.+++|+|++ +.|++|+.|++|++||+++++....+. +...+.+++|
T Consensus 97 DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~ 176 (493)
T PTZ00421 97 DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEW 176 (493)
T ss_pred CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEE
Confidence 999999999765 3567889999999999999986 699999999999999999998887774 4566999999
Q ss_pred CCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc-CeEEEEEcCCCCEEEEEE----CCCcEEEEECCCCceeE
Q psy6127 357 DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC-EWTGLKFSPDGKLILVST----NGSIIRLFDAFNGNCVQ 431 (515)
Q Consensus 357 s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~i~~l~~sp~~~~l~~~s----~dg~i~iwd~~~~~~~~ 431 (515)
+|+|.+|++++.|++|++||+++++ .......|.. ....+.|.|++..+++++ .|+.|++||+++.....
T Consensus 177 spdG~lLatgs~Dg~IrIwD~rsg~-----~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~ 251 (493)
T PTZ00421 177 NLDGSLLCTTSKDKKLNIIDPRDGT-----IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPY 251 (493)
T ss_pred ECCCCEEEEecCCCEEEEEECCCCc-----EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCce
Confidence 9999999999999999999999754 2222223333 345778999888887654 47899999998765332
Q ss_pred EeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcC
Q psy6127 432 SLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIP 510 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~ 510 (515)
..... .....+....|++++++|++++ .|+.|++||+.++++.......+..++..++|.|....=+..+.-.|++.+
T Consensus 252 ~~~~~-d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~~dv~~~Ei~r~~~l 330 (493)
T PTZ00421 252 STVDL-DQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWSLDTRKCEIARFYAL 330 (493)
T ss_pred eEecc-CCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccccccccceeeeEEEEe
Confidence 22211 1222356678999999999887 599999999999998877665466788999999954322222222455544
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=247.72 Aligned_cols=275 Identities=22% Similarity=0.349 Sum_probs=238.3
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE-ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT-INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
.|...+.+..|. ..++++++.|+++++||..++..+.. +.+|.+.|+++++..-++.++.++ .|.++++||..+|
T Consensus 206 ~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS--~D~t~rvWd~~sg 281 (537)
T KOG0274|consen 206 TDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGS--TDKTERVWDCSTG 281 (537)
T ss_pred cCcchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEe--cCCcEEeEecCCC
Confidence 367788899888 55899999999999999999999888 999999999999998666666554 7999999999999
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
++...+.+|.+.|.++... ...+++|+.|.+|++|++.++.++..+. +...|.++..+ +.++++|+.|++|++||
T Consensus 282 ~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~ 357 (537)
T KOG0274|consen 282 ECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWD 357 (537)
T ss_pred cEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEE
Confidence 9999999999999999887 5678889999999999999999999997 77888888887 88999999999999999
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-ceeEEeeccccCCCCCEEEEEecCCCEE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTPDSQFV 455 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp~g~~l 455 (515)
..+++ .+....+|...|.++.+.+. .++++|+.|++|++||+++. +++..+.+|... +..+. ..+++|
T Consensus 358 ~~~~~-----cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~---v~~l~--~~~~~L 426 (537)
T KOG0274|consen 358 PRTGK-----CLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSL---VSSLL--LRDNFL 426 (537)
T ss_pred hhhce-----eeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccc---ccccc--ccccee
Confidence 99765 77777789999999988765 79999999999999999999 999999887654 43333 358899
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-CCEEEEcCCCC
Q psy6127 456 ASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-SNMAFWIPTLS 513 (515)
Q Consensus 456 ~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~~~ 513 (515)
++++.||+|++||..+++++..+.+.|.+.|+.+++. +..+++++. +.+++||++..
T Consensus 427 vs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~-~~~il~s~~~~~~~l~dl~~~ 484 (537)
T KOG0274|consen 427 VSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG-KEEILCSSDDGSVKLWDLRSG 484 (537)
T ss_pred EeccccccEEEeecccCceeeeeccCCcccEEEeecC-cceEEEEecCCeeEEEecccC
Confidence 9999999999999999999999987556889999887 333443333 45999998764
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-29 Score=252.87 Aligned_cols=285 Identities=19% Similarity=0.267 Sum_probs=232.9
Q ss_pred cCCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCC------------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeC
Q psy6127 220 NTDKINSLDYSSDGSLLISCS--DDDQIIIYDCEQ------------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs--~dg~i~iwd~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
+...|.+++.+|||..+|||+ .||.++||+.+. .+.+.+...|.+.|.|+.|+|||.++++++ .
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGS--D 89 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGS--D 89 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeecc--C
Confidence 456799999999999999999 999999998652 234556778999999999999999887665 8
Q ss_pred CCeEEEEECCC------------------CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-e
Q psy6127 286 DATLRYLSLHD------------------NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-Q 346 (515)
Q Consensus 286 d~~v~vwd~~~------------------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~ 346 (515)
|+.|.+|+... -+.+..+.+|.+.|..++|+|++.+|++++.|++|.+||.++.+.+..+ .
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~ 169 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRG 169 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeec
Confidence 99999999772 1256778999999999999999999999999999999999999888888 5
Q ss_pred cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec---CCCCCcCeEEEEEcCCCCEEEEEEC----CCcE
Q psy6127 347 LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC---PGERGCEWTGLKFSPDGKLILVSTN----GSII 419 (515)
Q Consensus 347 ~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~---~~~~~~~i~~l~~sp~~~~l~~~s~----dg~i 419 (515)
|.+.+..+.|+|-|++||+-+.|++|++|++..... .+.+.. .......+..+.|||||.+|++... -..+
T Consensus 170 H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i--~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~ 247 (942)
T KOG0973|consen 170 HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGI--EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTI 247 (942)
T ss_pred ccccccceEECCccCeeeeecCCceEEEEEccccee--eEeeccchhhCCCcceeeecccCCCcCeecchhhccCCccee
Confidence 556788999999999999999999999999765321 111111 1223345779999999999998652 3468
Q ss_pred EEEECCCCceeEEeeccccCCCCCEEEEEecC-----CC------------EEEEEeCCCcEEEEECCCCeEEEEEcCCC
Q psy6127 420 RLFDAFNGNCVQSLSGVLNNNASPLEATFTPD-----SQ------------FVASGSTDGQVHIWNAERGYKVCVLDGDH 482 (515)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~-----g~------------~l~sgs~dg~I~iwd~~~~~~~~~~~~~h 482 (515)
.|.+-.+.+.-..+.+|.. ++.+++|+|. .+ .+|+|+.|++|.||.....+++.....-.
T Consensus 248 ~IieR~tWk~~~~LvGH~~---p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf 324 (942)
T KOG0973|consen 248 AIIERGTWKVDKDLVGHSA---PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLF 324 (942)
T ss_pred EEEecCCceeeeeeecCCC---ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhh
Confidence 8999888888888888665 4999999982 11 67899999999999998888887776545
Q ss_pred CCCeEEEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 483 PSAVQSLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 483 ~~~V~~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
...|.+++|+|||..|..+|-|+.|.-+.
T Consensus 325 ~~SI~DmsWspdG~~LfacS~DGtV~~i~ 353 (942)
T KOG0973|consen 325 NKSIVDMSWSPDGFSLFACSLDGTVALIH 353 (942)
T ss_pred cCceeeeeEcCCCCeEEEEecCCeEEEEE
Confidence 67899999999999999998775554443
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-27 Score=241.80 Aligned_cols=250 Identities=16% Similarity=0.152 Sum_probs=193.2
Q ss_pred EeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecC-CCeEEEEEeeCCCeEEEEECCCCe--------eeEEecCCCCC
Q psy6127 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS-KTTAIHASTKVDATLRYLSLHDNK--------YVRYFPGHVRK 309 (515)
Q Consensus 239 gs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~~~d~~v~vwd~~~~~--------~~~~~~~h~~~ 309 (515)
|+.++.+++|+......+..+.+|...|.+++|+|+ +..++++ +.|++|++||+.++. ++..+.+|...
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASg--S~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~ 127 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASG--SEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK 127 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEE--eCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence 667899999999888888899999999999999997 4544443 589999999997642 34567899999
Q ss_pred eEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceee
Q psy6127 310 VSSLNLSPVDDS-FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 310 v~~l~~~~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~ 388 (515)
|.+++|+|++.. +++++.|++|++||+++++....+.+...+.+++|+|+|.+|++++.|+.|++||++++. ..
T Consensus 128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~-----~i 202 (568)
T PTZ00420 128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE-----IA 202 (568)
T ss_pred EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCc-----EE
Confidence 999999999875 578999999999999999888777777779999999999999999999999999999864 22
Q ss_pred ecCCCCCcCe-----EEEEEcCCCCEEEEEECCC----cEEEEECCC-CceeEEeeccccCCCCCEEEEEecCCCEEEEE
Q psy6127 389 KCPGERGCEW-----TGLKFSPDGKLILVSTNGS----IIRLFDAFN-GNCVQSLSGVLNNNASPLEATFTPDSQFVASG 458 (515)
Q Consensus 389 ~~~~~~~~~i-----~~l~~sp~~~~l~~~s~dg----~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg 458 (515)
.....|.+.+ ....|++++.++++++.|+ .|++||+++ ++++..+.. ......+......++|.++++|
T Consensus 203 ~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~l-d~~~~~L~p~~D~~tg~l~lsG 281 (568)
T PTZ00420 203 SSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSI-DNASAPLIPHYDESTGLIYLIG 281 (568)
T ss_pred EEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEe-cCCccceEEeeeCCCCCEEEEE
Confidence 2223444433 2234568999999988764 799999995 555555432 2232323333345568899999
Q ss_pred eCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC
Q psy6127 459 STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 459 s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 496 (515)
+.|+.|++|++..+.....-...+..++.+++|.|+..
T Consensus 282 kGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 282 KGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred ECCCeEEEEEccCCcEEeecccccCCCccceEEccccc
Confidence 99999999999877533322223667899999999643
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=232.40 Aligned_cols=294 Identities=18% Similarity=0.291 Sum_probs=240.4
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
.+..+.||...|.+++-.|..... .+|++.|+-+++|| .....|..+|+.|.+.|..+++.. ..+++++.|.
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~----~aSGs~DG~VkiWn--lsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK 129 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLST----VASGSCDGEVKIWN--LSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDK 129 (433)
T ss_pred chhhccccccccchhhcCcchhhh----hhccccCceEEEEe--hhhhhhhheeecccCceeeEEecc--cceEEecCCc
Confidence 344567887777777776665333 24899999999999 888899999999999999999987 5788999999
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-EE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SF 322 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l 322 (515)
+|+.|.++ +.+.+++.+. ..+..+.-+..++ +++++ ...|.|||.+...++..+.-..+.|.++.|+|... .|
T Consensus 130 tvK~wk~~-~~p~~tilg~-s~~~gIdh~~~~~--~FaTc--Ge~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsIL 203 (433)
T KOG0268|consen 130 TVKQWKID-GPPLHTILGK-SVYLGIDHHRKNS--VFATC--GEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSIL 203 (433)
T ss_pred ceeeeecc-CCcceeeecc-ccccccccccccc--ccccc--CceeeecccccCCccceeecCCCceeEEecCCCcchhe
Confidence 99999987 4566666544 3445554444443 33332 45799999999999999988889999999999765 67
Q ss_pred EEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEE
Q psy6127 323 ISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLK 402 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~ 402 (515)
++|+.|+.|.+||++++.+++........+.++|+|++-.+++|++|..++.||++... ..+....+|.+.|..+.
T Consensus 204 as~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~----~p~~v~~dhvsAV~dVd 279 (433)
T KOG0268|consen 204 ASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS----RPLNVHKDHVSAVMDVD 279 (433)
T ss_pred eeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhc----ccchhhcccceeEEEec
Confidence 78889999999999999999988877778899999999999999999999999999865 35556678999999999
Q ss_pred EcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy6127 403 FSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV 477 (515)
Q Consensus 403 ~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~ 477 (515)
|||.|+-+++|+.|.+|+||..+.+.....+.. ..-..|.++.||.|.+++++||+|+.|++|.....+.+..
T Consensus 280 fsptG~EfvsgsyDksIRIf~~~~~~SRdiYht--kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Aseklgv 352 (433)
T KOG0268|consen 280 FSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHT--KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKLGV 352 (433)
T ss_pred cCCCcchhccccccceEEEeecCCCcchhhhhH--hhhheeeEEEEeccccEEEecCCCcceeeeecchhhhcCC
Confidence 999999999999999999999988876544432 2223389999999999999999999999998766554443
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-27 Score=240.39 Aligned_cols=230 Identities=15% Similarity=0.193 Sum_probs=185.0
Q ss_pred eccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-------eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 216 VFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQG-------TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 216 ~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
.+.||.+.|++++|+| ++++||+|+.|++|++||+.++ +++..+.+|...|.+++|+|++..+++ +++.|+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLa-Sgs~Dg 148 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLA-SAGADM 148 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEE-EEeCCC
Confidence 4789999999999999 8899999999999999999765 356778999999999999998754333 335799
Q ss_pred eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEE
Q psy6127 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAI 365 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~ 365 (515)
+|++||+++++.+..+.+|...|.+++|+|+++.|++++.|++|++||+++++.+..+..+.. ...+.|.+++..+++
T Consensus 149 tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt 228 (493)
T PTZ00421 149 VVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIIT 228 (493)
T ss_pred EEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEE
Confidence 999999999999999999999999999999999999999999999999999998877754432 346788898888776
Q ss_pred EE----CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCC
Q psy6127 366 GV----NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 366 g~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
++ .|+.|++||++..... .... .......+....|+|+++++++++ .|+.|++||+.+++........ ..
T Consensus 229 ~G~s~s~Dr~VklWDlr~~~~p-~~~~--~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~--s~ 303 (493)
T PTZ00421 229 LGCSKSQQRQIMLWDTRKMASP-YSTV--DLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYS--SV 303 (493)
T ss_pred EecCCCCCCeEEEEeCCCCCCc-eeEe--ccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeecc--CC
Confidence 54 4789999999875421 1111 112334555678999999999887 5999999999999877655432 23
Q ss_pred CCCEEEEEecC
Q psy6127 441 ASPLEATFTPD 451 (515)
Q Consensus 441 ~~i~~~~~sp~ 451 (515)
.+...++|.|.
T Consensus 304 ~~~~g~~~~pk 314 (493)
T PTZ00421 304 EPHKGLCMMPK 314 (493)
T ss_pred CCCcceEeccc
Confidence 34677888875
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-27 Score=239.66 Aligned_cols=251 Identities=13% Similarity=0.158 Sum_probs=193.0
Q ss_pred eCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCe--------eeeEecCCCC
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSD-GSLLISCSDDDQIIIYDCEQGT--------SKNTINSKKY 264 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd-~~~lasgs~dg~i~iwd~~~~~--------~~~~~~~~~~ 264 (515)
+++..+++++|+ .....++..+.+|.+.|.+++|+|+ +.+||+|+.||+|+|||+.++. +...+.+|..
T Consensus 49 gGG~~gvI~L~~--~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~ 126 (568)
T PTZ00420 49 GGGLIGAIRLEN--QMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK 126 (568)
T ss_pred CCCceeEEEeee--cCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC
Confidence 455677899998 4344677889999999999999996 7899999999999999997642 3446788999
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM 344 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 344 (515)
.|.+++|+|++..+++.+ +.|++|++||+++++.+..+. |...|.+++|+|+|.+|++++.|+.|++||+++++.+..
T Consensus 127 ~V~sVaf~P~g~~iLaSg-S~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~t 204 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSS-GFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASS 204 (568)
T ss_pred cEEEEEECCCCCeEEEEE-eCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 999999999987655433 579999999999998877775 667899999999999999999999999999999998887
Q ss_pred EecCC-Cee-----EEEECCCCCEEEEEECCC----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE
Q psy6127 345 IQLSG-NKP-----IAAYDPEGLAFAIGVNSD----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST 414 (515)
Q Consensus 345 ~~~~~-~~~-----~~~~s~~~~~l~~g~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s 414 (515)
+..+. .+. ...|++++.++++++.++ .|++||++.... +..... ...+.+.+......++|.++++|+
T Consensus 205 l~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~-pl~~~~-ld~~~~~L~p~~D~~tg~l~lsGk 282 (568)
T PTZ00420 205 FHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS-ALVTMS-IDNASAPLIPHYDESTGLIYLIGK 282 (568)
T ss_pred EecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC-ceEEEE-ecCCccceEEeeeCCCCCEEEEEE
Confidence 75443 222 234568999999887764 799999996432 222221 222333343444455688999999
Q ss_pred CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
.|+.|++|++..+. +..+.... +..+...++|.|..
T Consensus 283 GD~tIr~~e~~~~~-~~~l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 283 GDGNCRYYQHSLGS-IRKVNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred CCCeEEEEEccCCc-EEeecccc-cCCCccceEEcccc
Confidence 99999999998764 33343322 44567889999964
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-28 Score=213.25 Aligned_cols=272 Identities=21% Similarity=0.262 Sum_probs=221.2
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
..+.|.++.|+|.+..|+.++.||++++||+........+ .|..++.+++|.++. ..+ +|+.||.|+.+|+.++..
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d~~-~~~--~G~~dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFADES-TIV--TGGLDGQVRRYDLNTGNE 87 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccCCc-eEE--EeccCceEEEEEecCCcc
Confidence 4678999999999999999999999999999877554444 477899999999854 333 335799999999998876
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
.. +..|..+|.|+..++....+++||.|++|++||.+.......+.....+. +.+-.|+.|++|+.+..+.+||+++
T Consensus 88 ~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy--~~~v~g~~LvVg~~~r~v~iyDLRn 164 (323)
T KOG1036|consen 88 DQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVY--CMDVSGNRLVVGTSDRKVLIYDLRN 164 (323)
T ss_pred ee-eccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEE--EEeccCCEEEEeecCceEEEEEccc
Confidence 54 45699999999999988899999999999999999866666665555454 4455788999999999999999998
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----ceeEEeeccccC------CCCCEEEEEe
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG----NCVQSLSGVLNN------NASPLEATFT 449 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~----~~~~~~~~~~~~------~~~i~~~~~s 449 (515)
..... ......-...++++++-|++.-.++++-||.|.+=.+... +....+..|... ..+|++++|+
T Consensus 165 ~~~~~---q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fh 241 (323)
T KOG1036|consen 165 LDEPF---QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFH 241 (323)
T ss_pred ccchh---hhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEec
Confidence 65322 1112344557889999998888899999999887666554 333445555432 2468999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
|-.+.+|+|+.||.|.+||+.+.+.+..+.. ....|.+++|+.+|..||.++
T Consensus 242 p~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~-~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 242 PIHGTFATGGSDGIVNIWDLFNRKRLKQLAK-YETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred cccceEEecCCCceEEEccCcchhhhhhccC-CCCceEEEEeccCCCeEEEEe
Confidence 9999999999999999999999999999977 677899999999999999987
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-28 Score=236.17 Aligned_cols=271 Identities=19% Similarity=0.278 Sum_probs=231.0
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC
Q psy6127 226 SLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 226 ~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~ 305 (515)
-++|+. .+.||.|.. ..|.+|+..+++.......+...|+++.|+++|.+++++. .+|.|.+||..+.+.+..+.+
T Consensus 182 lldWss-~n~laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~--~~g~v~iwD~~~~k~~~~~~~ 257 (484)
T KOG0305|consen 182 LLDWSS-ANVLAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGT--SDGTVQIWDVKEQKKTRTLRG 257 (484)
T ss_pred Hhhccc-CCeEEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEee--cCCeEEEEehhhccccccccC
Confidence 366773 456777754 5799999999987776666689999999999999999887 699999999999999999998
Q ss_pred -CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE-E-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCC
Q psy6127 306 -HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM-I-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDK 382 (515)
Q Consensus 306 -h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~-~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~ 382 (515)
|...|.+++|. +..+.+|+.|+.|..+|++..+.... + .|...+..+.|++|++++|+|+.|+.+.|||.....
T Consensus 258 ~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~- 334 (484)
T KOG0305|consen 258 SHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE- 334 (484)
T ss_pred CcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc-
Confidence 99999999999 77899999999999999998876554 4 455668899999999999999999999999995533
Q ss_pred CCceeeecCCCCCcCeEEEEEcC-CCCEEEEEE--CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE-
Q psy6127 383 GPFASFKCPGERGCEWTGLKFSP-DGKLILVST--NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG- 458 (515)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg- 458 (515)
.......|...|.+++|+| ....||+|+ .|+.|++||..++..+..+.. ...|.++.|++..+-++++
T Consensus 335 ----p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt----gsQVcsL~Wsk~~kEi~sth 406 (484)
T KOG0305|consen 335 ----PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT----GSQVCSLIWSKKYKELLSTH 406 (484)
T ss_pred ----ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc----CCceeeEEEcCCCCEEEEec
Confidence 3333457888999999999 556888765 699999999999999887764 3449999999998766654
Q ss_pred -eCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 459 -STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 459 -s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
..++.|.||+..+-+.+..+.+ |...|..++++|||..+++|++| +++|++-.
T Consensus 407 G~s~n~i~lw~~ps~~~~~~l~g-H~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 407 GYSENQITLWKYPSMKLVAELLG-HTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred CCCCCcEEEEeccccceeeeecC-CcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 3567899999999999999998 99999999999999999999866 99998754
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-28 Score=212.77 Aligned_cols=266 Identities=18% Similarity=0.308 Sum_probs=221.5
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCC--eEEEEEeeCC
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKT--TAIHASTKVD 286 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~s~~~d 286 (515)
....++..+..|.+.|++++. ++.++|+||.|-+|+|||+.+......+-.|.+.|+++.|.+.-. .++.+ +.|
T Consensus 31 ~~l~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~--sdD 106 (362)
T KOG0294|consen 31 PTLKPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSG--SDD 106 (362)
T ss_pred eeeeccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeee--cCC
Confidence 345667788999999999999 488999999999999999999999999999999999999998875 56555 489
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
|.|.+|+...-..+..+++|.+.|+.++.+|.+++-++.+.|+.++.||+-.|+.-...........+.|+|.|.+++.+
T Consensus 107 G~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~ 186 (362)
T KOG0294|consen 107 GHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVS 186 (362)
T ss_pred CcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998888888878889999999999888
Q ss_pred ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEE
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 446 (515)
..+ .|-+|.+.+.. .+..... ...+.++.|. ++.++++|..|+.|.+||..+..+...+..|.+. |..+
T Consensus 187 ~~~-~i~i~q~d~A~-----v~~~i~~-~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~R---VK~i 255 (362)
T KOG0294|consen 187 GRN-KIDIYQLDNAS-----VFREIEN-PKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENR---VKDI 255 (362)
T ss_pred ecc-EEEEEecccHh-----Hhhhhhc-cccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhh---eeee
Confidence 654 68899887633 1111111 1334456665 5568999999999999999999999888887765 7777
Q ss_pred EE--ecCCCEEEEEeCCCcEEEEECCCC-----eEEEEEcCCCCCCeEEEEE
Q psy6127 447 TF--TPDSQFVASGSTDGQVHIWNAERG-----YKVCVLDGDHPSAVQSLQF 491 (515)
Q Consensus 447 ~~--sp~g~~l~sgs~dg~I~iwd~~~~-----~~~~~~~~~h~~~V~~l~~ 491 (515)
.+ .|++.+|++++.||.|+|||++.. +++..+. ....++|+..
T Consensus 256 ~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n--~~~RltCl~~ 305 (362)
T KOG0294|consen 256 ASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELN--TNVRLTCLRV 305 (362)
T ss_pred EEEecCCceEEEEeccCceEEEEEccccccCCcceeEEee--cCCccceeee
Confidence 64 467889999999999999999876 4555554 3456666654
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-28 Score=234.72 Aligned_cols=360 Identities=17% Similarity=0.236 Sum_probs=274.5
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCcee------------------------EEEEEEeeccccce
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFV------------------------SLFVTFVSRVLTMA 188 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~------------------------~~~~~~~~~~~~~~ 188 (515)
.+++.|..+|.| ++++-++...+.|++-.+.. ..++.|++.....
T Consensus 271 r~I~cgCa~g~v----------rlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~kl- 339 (1080)
T KOG1408|consen 271 RLIACGCAKGMV----------RLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKL- 339 (1080)
T ss_pred ceEEEeecccee----------eecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceE-
Confidence 789999999999 99998888888887654321 2233333222111
Q ss_pred eeeeeeCCCCcEEEEccceeeeeEe---eeeccccCCcEEEEEEcCC-----------CCEEEEEeCCCeEEEEECCCCe
Q psy6127 189 ASLAHSRSSRTITKCSENLVRSYRV---AKVFRENTDKINSLDYSSD-----------GSLLISCSDDDQIIIYDCEQGT 254 (515)
Q Consensus 189 ~~l~~s~~~~~~i~~wd~~~~~~~~---~~~~~~h~~~I~~l~~spd-----------~~~lasgs~dg~i~iwd~~~~~ 254 (515)
. .--.|..+-+|| ++..+. ...+--|...|+.+.--|- ...+.|||.|++||+||++.+.
T Consensus 340 ---s-cVYndhSlYvWD--vrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ct 413 (1080)
T KOG1408|consen 340 ---S-CVYNDHSLYVWD--VRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCT 413 (1080)
T ss_pred ---E-EEEcCceEEEEe--ccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeeccccc
Confidence 0 122345577787 443322 2345578999998876551 1358999999999999987532
Q ss_pred eeeE-------------------------------------ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 255 SKNT-------------------------------------INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 255 ~~~~-------------------------------------~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
.-.. .-....++.+++.+|++++++ +|+.-|+++||++.+-
T Consensus 414 nn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLA--sGDr~GnlrVy~Lq~l 491 (1080)
T KOG1408|consen 414 NNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLA--SGDRGGNLRVYDLQEL 491 (1080)
T ss_pred ccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceec--ccCccCceEEEEehhh
Confidence 1111 012245699999999999876 4467899999999999
Q ss_pred eeeEEecCCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEcCCCC-eEEEE-ecCCCeeEEEECCCC--CEEEEEECCC
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPV---DDSFISGSYDKTVRVWDLRQPN-NVGMI-QLSGNKPIAAYDPEG--LAFAIGVNSD 370 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~---~~~l~s~s~dg~i~iwd~~~~~-~~~~~-~~~~~~~~~~~s~~~--~~l~~g~~dg 370 (515)
+....+..|...|.|+.++.. .++|++++.|.-|.+||+...- .++++ .|...++++.|.-.| ..+++++.|.
T Consensus 492 ~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADk 571 (1080)
T KOG1408|consen 492 EYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADK 571 (1080)
T ss_pred hhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCch
Confidence 999999999999999999853 4689999999999999997653 34555 456679999998877 6788888888
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
.|.+--.+.........-.........+..++..|..+++++++.|..|+|||+.+|+..+.|++..++.+....+...|
T Consensus 572 simFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDP 651 (1080)
T KOG1408|consen 572 SIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDP 651 (1080)
T ss_pred hhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECC
Confidence 77543333211111111111222344678999999999999999999999999999999999999998888899999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
.|-|+++...|.++.++|..+|+++.+..+ |...|+.+.|.+|-+.|++.++| +.||.++.
T Consensus 652 SgiY~atScsdktl~~~Df~sgEcvA~m~G-HsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 652 SGIYLATSCSDKTLCFVDFVSGECVAQMTG-HSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred CccEEEEeecCCceEEEEeccchhhhhhcC-cchheeeeeecccchhheeecCCceEEEEECch
Confidence 999999999999999999999999999999 99999999999999999998887 77887764
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=227.85 Aligned_cols=285 Identities=16% Similarity=0.231 Sum_probs=229.9
Q ss_pred eeeccccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
+..+.||.+.|.|++=+|.. ..+|+|+.||.|+|||+....+..++..|.+.|..+++.. ..++++ +.|.+|+.|
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tv--gdDKtvK~w 134 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTV--GDDKTVKQW 134 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEe--cCCcceeee
Confidence 45578999999999999976 7899999999999999999999999999999999999987 334444 379999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCC-CEEEEEECCC
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEG-LAFAIGVNSD 370 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~-~~l~~g~~dg 370 (515)
.++. .+.+++.+ .+.+..+.-+..+..++|+|. .|.|||.....++..+... ..+.++.|+|.. ..|+++..|+
T Consensus 135 k~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDr 210 (433)
T KOG0268|consen 135 KIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDR 210 (433)
T ss_pred eccC-Ccceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCC
Confidence 9875 46666653 456777877777888998875 5899999988888888554 448899999965 4566777999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
.|.+||++.... ...+.. ...-+.|+|+|.+-.+++|++|..++.||++..+ ..+..|.++.+.+.++.|||
T Consensus 211 sIvLyD~R~~~P--l~KVi~----~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~--~p~~v~~dhvsAV~dVdfsp 282 (433)
T KOG0268|consen 211 SIVLYDLRQASP--LKKVIL----TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS--RPLNVHKDHVSAVMDVDFSP 282 (433)
T ss_pred ceEEEecccCCc--cceeee----eccccceecCccccceeeccccccceehhhhhhc--ccchhhcccceeEEEeccCC
Confidence 999999998542 222222 1223489999988888899999999999988654 44555667777899999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCCC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~ 514 (515)
.|+-+++||.|.+|+||.+..+.........--..|.++.||.|.+++++||.+ +++|.-..++
T Consensus 283 tG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 283 TGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred CcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence 999999999999999999988765554433233569999999999999999865 9999876543
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=211.68 Aligned_cols=242 Identities=19% Similarity=0.319 Sum_probs=202.3
Q ss_pred cCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCC-CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 220 NTDKINSLDYSSD-GSLLISCSDDDQIIIYDCEQ-GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 220 h~~~I~~l~~spd-~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
-.+.+..++|++. .+.+++++.||+++|||... ..++..++.|...|.++.|++.....++.+ +.|++|++|+...+
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~lts-SWD~TiKLW~~~r~ 137 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTS-SWDGTIKLWDPNRP 137 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEee-ccCCceEeecCCCC
Confidence 3678999999994 57889999999999999653 467888999999999999999888877777 79999999999999
Q ss_pred eeeEEecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECC-CCCEEEEEECCCcEEE
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDP-EGLAFAIGVNSDSIKL 374 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~-~~~~l~~g~~dg~i~i 374 (515)
+.+.++.+|...|...+|+|. .+.++++|.|+++++||++.......+. +...+.++.|+. +.+.+++|+.|+.|+.
T Consensus 138 ~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~ 217 (311)
T KOG0277|consen 138 NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRG 217 (311)
T ss_pred cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEE
Confidence 999999999999999999996 5699999999999999998765444454 444688899987 6678999999999999
Q ss_pred EEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCc-eeEEeeccccCCCCCEEEEEec-C
Q psy6127 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGN-CVQSLSGVLNNNASPLEATFTP-D 451 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~sp-~ 451 (515)
||+++.+. .+....+|.-.|+.+.|||. ...|++++.|-++++||...+. ++.+... |...+..+.|++ +
T Consensus 218 wDir~~r~----pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~---HtEFv~g~Dws~~~ 290 (311)
T KOG0277|consen 218 WDIRNLRT----PLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDH---HTEFVCGLDWSLFD 290 (311)
T ss_pred Eehhhccc----cceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhc---cceEEecccccccc
Confidence 99998763 33334688899999999995 4588899999999999987554 3344443 333478888888 5
Q ss_pred CCEEEEEeCCCcEEEEEC
Q psy6127 452 SQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~ 469 (515)
+.++|+.+.|+.++||+.
T Consensus 291 ~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 291 PGQVASTGWDELLYVWNP 308 (311)
T ss_pred Cceeeecccccceeeecc
Confidence 679999999999999984
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=211.55 Aligned_cols=277 Identities=23% Similarity=0.352 Sum_probs=218.0
Q ss_pred EEEEEcC-CCCEEEEEe-------CCCeEEEEECCCCeeeeEecC--CCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 225 NSLDYSS-DGSLLISCS-------DDDQIIIYDCEQGTSKNTINS--KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 225 ~~l~~sp-d~~~lasgs-------~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
.++.||| -.++||.+. ..|++.|-++..++-+..+.. -...+..++|++.....+++. +.||++++||.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a-~GDGSLrl~d~ 90 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAA-SGDGSLRLFDL 90 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEE-ecCceEEEecc
Confidence 6788999 233444332 358899999875554444432 347799999999877766655 35999999996
Q ss_pred CC-CeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECC-CCCEEEEEECCC
Q psy6127 295 HD-NKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDP-EGLAFAIGVNSD 370 (515)
Q Consensus 295 ~~-~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~-~~~~l~~g~~dg 370 (515)
.. ..++..++.|...|.++.|++..+ .++++|.|++|++|+...++.+.++..+ .-+....|+| .++.+++++.|+
T Consensus 91 ~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~ 170 (311)
T KOG0277|consen 91 TMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDG 170 (311)
T ss_pred CCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCc
Confidence 43 467889999999999999998654 7888899999999999999999998544 4477899999 578999999999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCc-eeEEeeccccCCCCCEEEEE
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGN-CVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~ 448 (515)
++++||++...+ .+. ...|...+.++.|+. +.+.+++|+.|+.|+.||+++-+ ++..+.+ +...|+.++|
T Consensus 171 ~l~lwdvr~~gk----~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~g---h~~AVRkvk~ 242 (311)
T KOG0277|consen 171 TLRLWDVRSPGK----FMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNG---HGLAVRKVKF 242 (311)
T ss_pred eEEEEEecCCCc----eeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecC---CceEEEEEec
Confidence 999999998642 222 346678899999998 56688899999999999998764 4555554 4555999999
Q ss_pred ecCC-CEEEEEeCCCcEEEEECCCCe-EEEEEcCCCCCCeEEEEECC-CCCEEEEeeCC--EEEEcCC
Q psy6127 449 TPDS-QFVASGSTDGQVHIWNAERGY-KVCVLDGDHPSAVQSLQFNP-KYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 449 sp~g-~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp-~~~~las~~~d--v~iW~~~ 511 (515)
||.. ..||+++.|-+++|||...+. .+.+... |+.-|..+.|++ ++.++|+++-| +.||+.-
T Consensus 243 Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~-HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p~ 309 (311)
T KOG0277|consen 243 SPHHASLLASASYDMTVRIWDPERQDSAIETVDH-HTEFVCGLDWSLFDPGQVASTGWDELLYVWNPG 309 (311)
T ss_pred CcchhhHhhhccccceEEecccccchhhhhhhhc-cceEEeccccccccCceeeecccccceeeeccc
Confidence 9965 689999999999999998554 4444444 899999999999 67789998855 9999863
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=215.10 Aligned_cols=293 Identities=17% Similarity=0.241 Sum_probs=243.0
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
..++.+.+.||.+.|+.++.......+.++|.|.+.+||.+++|.++.++.+|.+.|+++.|++.+..++.++ .|++.
T Consensus 137 ~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaS--GD~ta 214 (481)
T KOG0300|consen 137 KFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTAS--GDETA 214 (481)
T ss_pred eEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEcc--CCcch
Confidence 4577788999999999999988778999999999999999999999999999999999999999998887776 48998
Q ss_pred EEEEC------CC----------------------------------CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC
Q psy6127 290 RYLSL------HD----------------------------------NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329 (515)
Q Consensus 290 ~vwd~------~~----------------------------------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg 329 (515)
.||.. .. ..++..+.+|.+.|.+..|...|+.+++++.|.
T Consensus 215 HIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDR 294 (481)
T KOG0300|consen 215 HIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDR 294 (481)
T ss_pred HHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccc
Confidence 88851 11 013556789999999999999999999999999
Q ss_pred cEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC
Q psy6127 330 TVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK 408 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~ 408 (515)
+..+||+++++.+..+. +....+.++-+|..+++++.+.|.+.++||++.. +.......+|...|+++.|..+.
T Consensus 295 TAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRea----I~sV~VFQGHtdtVTS~vF~~dd- 369 (481)
T KOG0300|consen 295 TANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREA----IQSVAVFQGHTDTVTSVVFNTDD- 369 (481)
T ss_pred cceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhh----cceeeeecccccceeEEEEecCC-
Confidence 99999999999999884 4456788999999999999999999999999842 23555567899999999998775
Q ss_pred EEEEEECCCcEEEEECCCCc-eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc----CCCC
Q psy6127 409 LILVSTNGSIIRLFDAFNGN-CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD----GDHP 483 (515)
Q Consensus 409 ~l~~~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~----~~h~ 483 (515)
.+++|+.|.+|++||+++.. ++.++.. .++++.++.+..++.++.--++..|++||+. |..+..++ ..|.
T Consensus 370 ~vVSgSDDrTvKvWdLrNMRsplATIRt----dS~~NRvavs~g~~iIAiPhDNRqvRlfDln-G~RlaRlPrtsRqgHr 444 (481)
T KOG0300|consen 370 RVVSGSDDRTVKVWDLRNMRSPLATIRT----DSPANRVAVSKGHPIIAIPHDNRQVRLFDLN-GNRLARLPRTSRQGHR 444 (481)
T ss_pred ceeecCCCceEEEeeeccccCcceeeec----CCccceeEeecCCceEEeccCCceEEEEecC-CCccccCCcccccccc
Confidence 67899999999999998764 4555553 3448899999988899999888999999986 44444443 2488
Q ss_pred CCeEEEEECCCCC--EEEEeeCC--EEEEcCCCCC
Q psy6127 484 SAVQSLQFNPKYH--MLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 484 ~~V~~l~~sp~~~--~las~~~d--v~iW~~~~~~ 514 (515)
.-|+|++|..+.. -|.+++-| +.=|.+..+.
T Consensus 445 RMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 445 RMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred eeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 8999999987543 35666644 6678877654
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=225.86 Aligned_cols=272 Identities=20% Similarity=0.283 Sum_probs=225.9
Q ss_pred CCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 221 TDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 221 ~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
.+.|.+++|+|... -+|+++. -.+.||+..+....+++......+.++.|-.||..++ .|+..|.|+++|..+...
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~Lla--aGD~sG~V~vfD~k~r~i 102 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLA--AGDESGHVKVFDMKSRVI 102 (487)
T ss_pred cCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEE--ccCCcCcEEEeccccHHH
Confidence 46799999999543 3455443 5799999998888888888888999999999997554 346899999999888778
Q ss_pred eEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCC-CCEEEEEECCCcEEEEE
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPE-GLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d 376 (515)
++.+.+|+.+|..+.|+|+++ .+++|+.|+.+++||+.+......+ .+.+.+.+.+++|. +..+++|+.||+|++||
T Consensus 103 LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~D 182 (487)
T KOG0310|consen 103 LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWD 182 (487)
T ss_pred HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEE
Confidence 899999999999999999766 7888899999999999998864344 55567999999995 55899999999999999
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcee-EEeeccccCCCCCEEEEEecCCCEE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV-QSLSGVLNNNASPLEATFTPDSQFV 455 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~i~~~~~sp~g~~l 455 (515)
++... .....-.|..+|..+.+-|.|..+++++. +.+++||+.+|... ..... |...|+|+++..++..|
T Consensus 183 tR~~~-----~~v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~---H~KtVTcL~l~s~~~rL 253 (487)
T KOG0310|consen 183 TRSLT-----SRVVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFN---HNKTVTCLRLASDSTRL 253 (487)
T ss_pred eccCC-----ceeEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhc---ccceEEEEEeecCCceE
Confidence 99854 22223478889999999999999998765 57999999866543 33332 44459999999999999
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEE
Q psy6127 456 ASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMA 506 (515)
Q Consensus 456 ~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~ 506 (515)
++|+-|+.|++||+.+-+.+..+. ..++|.+++.+|++..++.|-+++-
T Consensus 254 lS~sLD~~VKVfd~t~~Kvv~s~~--~~~pvLsiavs~dd~t~viGmsnGl 302 (487)
T KOG0310|consen 254 LSGSLDRHVKVFDTTNYKVVHSWK--YPGPVLSIAVSPDDQTVVIGMSNGL 302 (487)
T ss_pred eecccccceEEEEccceEEEEeee--cccceeeEEecCCCceEEEecccce
Confidence 999999999999999999999887 6899999999999999999877643
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=233.35 Aligned_cols=258 Identities=21% Similarity=0.289 Sum_probs=219.5
Q ss_pred EEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeE
Q psy6127 200 ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTA 278 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 278 (515)
.+-+|+ ....+......-+...|+++.|+++|++||+|..+|.|.|||..+.+.+..+.+ |...|.+++|...
T Consensus 198 ~vylW~--~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~---- 271 (484)
T KOG0305|consen 198 SVYLWS--ASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSS---- 271 (484)
T ss_pred eEEEEe--cCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCc----
Confidence 477888 445555555555599999999999999999999999999999999999999998 9999999999822
Q ss_pred EEEEeeCCCeEEEEECCCCeeeEE-ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEE
Q psy6127 279 IHASTKVDATLRYLSLHDNKYVRY-FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAY 356 (515)
Q Consensus 279 ~~~s~~~d~~v~vwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~ 356 (515)
++.+|+.++.|..+|++..+.... +.+|...|..++|++|+.++|+|+.|+.+.|||....++...+ .+...+..++|
T Consensus 272 ~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~aw 351 (484)
T KOG0305|consen 272 VLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAW 351 (484)
T ss_pred eEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeee
Confidence 345557899999999998876655 8899999999999999999999999999999999777776666 67778999999
Q ss_pred CC-CCCEEEEEE--CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE--CCCcEEEEECCCCceeE
Q psy6127 357 DP-EGLAFAIGV--NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST--NGSIIRLFDAFNGNCVQ 431 (515)
Q Consensus 357 s~-~~~~l~~g~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s--~dg~i~iwd~~~~~~~~ 431 (515)
+| ....||+|+ .|+.|++||..++. .+.. ......|.++.|++..+.|+++. .++.|.||+..+.+.+.
T Consensus 352 cP~q~~lLAsGGGs~D~~i~fwn~~~g~-----~i~~-vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~ 425 (484)
T KOG0305|consen 352 CPWQSGLLATGGGSADRCIKFWNTNTGA-----RIDS-VDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVA 425 (484)
T ss_pred CCCccCceEEcCCCcccEEEEEEcCCCc-----Eecc-cccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceee
Confidence 99 566788864 69999999999764 3332 24566899999999998777644 57789999999999888
Q ss_pred EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 432 SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
.+.+|... |..++++|||..+++|+.|.++++|++-..
T Consensus 426 ~l~gH~~R---Vl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 426 ELLGHTSR---VLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred eecCCcce---eEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 88886655 999999999999999999999999998664
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=241.05 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=204.0
Q ss_pred eEec-CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC--------------------------------C------
Q psy6127 257 NTIN-SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD--------------------------------N------ 297 (515)
Q Consensus 257 ~~~~-~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~--------------------------------~------ 297 (515)
..+. .|.+.|+++.|++||+++++++ .|+.|+||.+.. .
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaG--eD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAG--EDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecC--CCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 3445 8999999999999999888765 899999998755 0
Q ss_pred ----------------------eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEE
Q psy6127 298 ----------------------KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAA 355 (515)
Q Consensus 298 ----------------------~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 355 (515)
++++.|.||.+.|.++.|+. +++|++++.|.+|++|++...+|+..|.|..-|+|++
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVa 416 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVA 416 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEE
Confidence 11334569999999999997 5689999999999999999999999999999999999
Q ss_pred ECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 356 YDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 356 ~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
|+| |.++|++|+-||.++||++...+ +.....-...|++++|.|||++.++|+.+|..++|++...+......
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d~~------Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~ 490 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISDKK------VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFH 490 (712)
T ss_pred ecccCCCcEeecccccceEEeecCcCe------eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeee
Confidence 999 78999999999999999998743 22222334689999999999999999999999999998877665544
Q ss_pred cccc-----CCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCC-CeEEEEECCCCCEEEEeeCC--E
Q psy6127 435 GVLN-----NNASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYKVCVLDGDHPS-AVQSLQFNPKYHMLASACSN--M 505 (515)
Q Consensus 435 ~~~~-----~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~-~V~~l~~sp~~~~las~~~d--v 505 (515)
.+.. ....|+.+.|.|.. ..+++.+.|..|||||..+..++..+.+.+.. .-....|+.||+++++++.| |
T Consensus 491 I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~V 570 (712)
T KOG0283|consen 491 IRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWV 570 (712)
T ss_pred EeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceE
Confidence 3221 12259999999854 35667789999999999999999999874433 33577899999999999977 9
Q ss_pred EEEcCCC
Q psy6127 506 AFWIPTL 512 (515)
Q Consensus 506 ~iW~~~~ 512 (515)
.||+++.
T Consensus 571 YiW~~~~ 577 (712)
T KOG0283|consen 571 YIWKNDS 577 (712)
T ss_pred EEEeCCC
Confidence 9999753
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=221.57 Aligned_cols=287 Identities=18% Similarity=0.221 Sum_probs=236.8
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE-----------------e-cCCCCceeEEEEecCC
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT-----------------I-NSKKYGVDLIKFTHSK 275 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~-----------------~-~~~~~~v~~~~~~~~~ 275 (515)
......|.-+|.|++++||+++.++++.|++|.=|++.+++.... - +.|...+.+++.++|+
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 355678999999999999999999999999999999988763311 1 2677889999999999
Q ss_pred CeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEE
Q psy6127 276 TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIA 354 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~ 354 (515)
++++++ +.|..|.||+.++.+.++.+.+|.+.|.+++|-.....+++++.|++|++|++.....+.++ .|++.+..+
T Consensus 215 kylatg--g~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~I 292 (479)
T KOG0299|consen 215 KYLATG--GRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGI 292 (479)
T ss_pred cEEEec--CCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeee
Confidence 987765 47999999999999999999999999999999988889999999999999999988777665 566668888
Q ss_pred EECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 355 AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 355 ~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
.....++.+.+|+.|+++++|++.... .....++.+.+-+++|-.+ ..+++|+.+|.|.+|++.+.+++.+..
T Consensus 293 daL~reR~vtVGgrDrT~rlwKi~ees------qlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~ 365 (479)
T KOG0299|consen 293 DALSRERCVTVGGRDRTVRLWKIPEES------QLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSR 365 (479)
T ss_pred chhcccceEEeccccceeEEEeccccc------eeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEee
Confidence 888888888889999999999995422 2223455677889998755 578899999999999999988887664
Q ss_pred cccc---------CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC----eEEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 435 GVLN---------NNASPLEATFTPDSQFVASGSTDGQVHIWNAERG----YKVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 435 ~~~~---------~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~----~~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
...+ .+..|++++..|...++++|+.+|.|++|-+..| .++..+. -.+.|++++|+++|+.+++|
T Consensus 366 ~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls--~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 366 LAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS--LVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred ccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc--cccEEEEEEEccCCCEEEEe
Confidence 3221 1236899999999999999999999999999888 4455554 57899999999999977777
Q ss_pred eCC----EEEEcCC
Q psy6127 502 CSN----MAFWIPT 511 (515)
Q Consensus 502 ~~d----v~iW~~~ 511 (515)
-+. +|-|...
T Consensus 444 iGkEhRlGRW~~~k 457 (479)
T KOG0299|consen 444 IGKEHRLGRWWCLK 457 (479)
T ss_pred cccccccceeeEee
Confidence 643 6666554
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-26 Score=218.43 Aligned_cols=290 Identities=17% Similarity=0.224 Sum_probs=221.1
Q ss_pred eeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeeeeEecCCCCceeEEE
Q psy6127 192 AHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 192 ~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~l-asgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 270 (515)
..+...++.+.+|| ..+.++...+.+|.. +.+++|+|+++.+ ++++.++.|++||..+++....+..+.. +..++
T Consensus 4 ~~s~~~d~~v~~~d--~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~ 79 (300)
T TIGR03866 4 YVSNEKDNTISVID--TATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFA 79 (300)
T ss_pred EEEecCCCEEEEEE--CCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEE
Confidence 34677788999999 667788888877654 6789999999876 5677889999999999888777765543 56789
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEEcCCCCeEEEEecCC
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK-TVRVWDLRQPNNVGMIQLSG 349 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg-~i~iwd~~~~~~~~~~~~~~ 349 (515)
|+|+++.+++++ ..++.+++||+.+++.+..+.. ...+.+++|+|+++.+++++.++ .+.+||.++++.........
T Consensus 80 ~~~~g~~l~~~~-~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 157 (300)
T TIGR03866 80 LHPNGKILYIAN-EDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQ 157 (300)
T ss_pred ECCCCCEEEEEc-CCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCC
Confidence 999998776654 4689999999999888777753 34568899999999999888775 46778999888776665555
Q ss_pred CeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCC--CcCeEEEEEcCCCCEEEEE-ECCCcEEEEECC
Q psy6127 350 NKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGER--GCEWTGLKFSPDGKLILVS-TNGSIIRLFDAF 425 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~~i~~l~~sp~~~~l~~~-s~dg~i~iwd~~ 425 (515)
....++|+|+++.+++++ .++.+++||+++.+............+ ......++|+|++++++++ +.++.+.+||.+
T Consensus 158 ~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~ 237 (300)
T TIGR03866 158 RPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAK 237 (300)
T ss_pred CccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECC
Confidence 577899999999886554 589999999987542111111111111 1123468999999986554 456789999999
Q ss_pred CCceeEEeeccccCCCCCEEEEEecCCCEEEEE-eCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASG-STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
+++....+.. ...+.+++|+|+|++|+++ +.+|.|++||+.+++++..+.. ....++++++|
T Consensus 238 ~~~~~~~~~~----~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~~~ 300 (300)
T TIGR03866 238 TYEVLDYLLV----GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV--GRLPWGVVVRP 300 (300)
T ss_pred CCcEEEEEEe----CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc--ccccceeEeCC
Confidence 8887765532 1237899999999999886 4689999999999999999974 35569998876
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=205.58 Aligned_cols=236 Identities=23% Similarity=0.387 Sum_probs=206.0
Q ss_pred eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE--EecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEE
Q psy6127 257 NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR--YFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRV 333 (515)
Q Consensus 257 ~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~i 333 (515)
+.+++|...+.+++|+.+|..++.++ .|+++.+|+++..+... ...+|.+.|-.++|+|.. ..+++++.|.+|++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs--~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~ 91 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGS--FDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRI 91 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecc--cCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEE
Confidence 45678889999999999999887665 79999999998775543 357899999999999865 48999999999999
Q ss_pred EEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE
Q psy6127 334 WDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS 413 (515)
Q Consensus 334 wd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~ 413 (515)
||++.+++.........-..++|+|+|.+++++..|..|...|.++.+... .......+..++|+.++.+++..
T Consensus 92 wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~------~~~~~~e~ne~~w~~~nd~Fflt 165 (313)
T KOG1407|consen 92 WDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVN------EEQFKFEVNEISWNNSNDLFFLT 165 (313)
T ss_pred EEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceee------hhcccceeeeeeecCCCCEEEEe
Confidence 999999999999888777889999999999999999999999999865221 12333456689999888888888
Q ss_pred ECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 414 TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 414 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
...|.|.|.....-+++..+..|... ..|+.|+|+|+++|+|+.|-.+.+||++.--+++.+.. +.-+|..+.|+.
T Consensus 166 ~GlG~v~ILsypsLkpv~si~AH~sn---CicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isR-ldwpVRTlSFS~ 241 (313)
T KOG1407|consen 166 NGLGCVEILSYPSLKPVQSIKAHPSN---CICIEFDPDGRYFATGSADALVSLWDVDELICERCISR-LDWPVRTLSFSH 241 (313)
T ss_pred cCCceEEEEeccccccccccccCCcc---eEEEEECCCCceEeeccccceeeccChhHhhhheeecc-ccCceEEEEecc
Confidence 88899999999999999998886643 89999999999999999999999999999999999987 999999999999
Q ss_pred CCCEEEEeeCC
Q psy6127 494 KYHMLASACSN 504 (515)
Q Consensus 494 ~~~~las~~~d 504 (515)
||++||+|+.|
T Consensus 242 dg~~lASaSED 252 (313)
T KOG1407|consen 242 DGRMLASASED 252 (313)
T ss_pred CcceeeccCcc
Confidence 99999999987
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-27 Score=239.83 Aligned_cols=285 Identities=15% Similarity=0.201 Sum_probs=223.0
Q ss_pred eEEEEEEeeccccceeeeeeeCC--CCcEEEEcccee----------eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRS--SRTITKCSENLV----------RSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~--~~~~i~~wd~~~----------~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
.+.++...+.... + .+++ .|+.+++|.... .--+.+.+...|.+.|+|+.|+|||++||+||+
T Consensus 15 ~IfSIdv~pdg~~----~-aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 15 SIFSIDVHPDGVK----F-ATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred eEEEEEecCCcee----E-ecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 3555555554421 2 2444 566666886321 112345567889999999999999999999999
Q ss_pred CCeEEEEECCC------------------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe
Q psy6127 242 DDQIIIYDCEQ------------------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF 303 (515)
Q Consensus 242 dg~i~iwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~ 303 (515)
|+.|.||.... .+....+.+|...|..++|+|++..++.++ .|++|.+||..+.+.+.++
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s--~DnsViiwn~~tF~~~~vl 167 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVS--LDNSVIIWNAKTFELLKVL 167 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEec--ccceEEEEccccceeeeee
Confidence 99999998762 135677899999999999999998777665 7999999999999999999
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-------CCeeEEEECCCCCEEEEEEC----CCcE
Q psy6127 304 PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-------GNKPIAAYDPEGLAFAIGVN----SDSI 372 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~s~~~~~l~~g~~----dg~i 372 (515)
.+|.+.|..+.|.|-|++|++-+.|++|++|++.+....+.+..+ ....-+.|||||++|++.-. -.++
T Consensus 168 ~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~ 247 (942)
T KOG0973|consen 168 RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTI 247 (942)
T ss_pred ecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCccee
Confidence 999999999999999999999999999999998776666655221 22456899999999998642 3467
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-----CC------------EEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-----GK------------LILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-----~~------------~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
.|.+-.+.+ .-...-+|..++.++.|+|. .+ .+|+|+.|++|.||.....+++.....
T Consensus 248 ~IieR~tWk-----~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~ 322 (942)
T KOG0973|consen 248 AIIERGTWK-----VDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHN 322 (942)
T ss_pred EEEecCCce-----eeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhh
Confidence 777765543 33334577789999999982 11 578899999999999877777665543
Q ss_pred cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 436 VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 436 ~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
. ....|.+++|+|||..|+++|.||+|.+..++..
T Consensus 323 l--f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 323 L--FNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred h--hcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 3 3344999999999999999999999999998754
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-25 Score=209.83 Aligned_cols=341 Identities=15% Similarity=0.191 Sum_probs=252.2
Q ss_pred CCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEc
Q psy6127 151 YNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYS 230 (515)
Q Consensus 151 ~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~s 230 (515)
+-.+++||..+.+.|..+..-+..|.++.|.+..... .-++...+.+.+..+|| .+........+.-+..|....|+
T Consensus 133 ~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~-~l~~vD~s~~h~lSVWd--Wqk~~~~~~vk~sne~v~~a~FH 209 (626)
T KOG2106|consen 133 QPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGS-LLCAVDDSNPHMLSVWD--WQKKAKLGPVKTSNEVVFLATFH 209 (626)
T ss_pred CCeeeecccccceeeeeeccccccceeeeecccCCCc-eEEEecCCCccccchhh--chhhhccCcceeccceEEEEEec
Confidence 3456999999999999887555556666666443222 22444666777788888 44445555566677889999999
Q ss_pred CCC-CEEEEEeCCCeEEEEECCCCeeeeE---ecCC-CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC
Q psy6127 231 SDG-SLLISCSDDDQIIIYDCEQGTSKNT---INSK-KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 231 pd~-~~lasgs~dg~i~iwd~~~~~~~~~---~~~~-~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~ 305 (515)
|.+ +.+++++ .+.+..|+.+.+...++ +..+ ...|.|++|.++|+. .+|+.+|.|.||+..+.+..+....
T Consensus 210 Ptd~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdv---iTgDS~G~i~Iw~~~~~~~~k~~~a 285 (626)
T KOG2106|consen 210 PTDPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDV---ITGDSGGNILIWSKGTNRISKQVHA 285 (626)
T ss_pred cCCCcEEEEeC-CceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCE---EeecCCceEEEEeCCCceEEeEeee
Confidence 955 4555554 58999999998765544 3332 367999999999973 3556799999999998888877779
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-----------------------------------------eEEE
Q psy6127 306 HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN-----------------------------------------NVGM 344 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~-----------------------------------------~~~~ 344 (515)
|.+.|.+++...+|.+ ++|+.|+.|..||-.-.+ .+..
T Consensus 286 H~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v 364 (626)
T KOG2106|consen 286 HDGGVFSLCMLRDGTL-LSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTV 364 (626)
T ss_pred cCCceEEEEEecCccE-eecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEE
Confidence 9999999999998875 459999999999842100 0001
Q ss_pred EecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 345 IQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 345 ~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
+.+......++.+|+.+.+++++.|+.+++|+ . . .+........+..++.|+|.| .++.|+..|...+.|.
T Consensus 365 ~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~--~----k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~ 435 (626)
T KOG2106|consen 365 QGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--D--H----KLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDT 435 (626)
T ss_pred EecccceeeEEcCCChhheeeccCcceEEEcc--C--C----ceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEec
Confidence 11223345578899999999999999999999 2 1 111112234466799999999 9999999999999999
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe-EEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY-KVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
++...+.. +.. ..++..++|+|+|.+||.|+.|+.|+||.+..+. ........+..+|+.+.|++|++++.+-++
T Consensus 436 e~~~lv~~---~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~ 511 (626)
T KOG2106|consen 436 ETQDLVTI---HTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSG 511 (626)
T ss_pred ccceeEEE---Eec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccC
Confidence 88544432 223 5569999999999999999999999999987553 333333335589999999999999999887
Q ss_pred C--EEEEcCCC
Q psy6127 504 N--MAFWIPTL 512 (515)
Q Consensus 504 d--v~iW~~~~ 512 (515)
| +-.|....
T Consensus 512 d~eiLyW~~~~ 522 (626)
T KOG2106|consen 512 DYEILYWKPSE 522 (626)
T ss_pred ceEEEEEcccc
Confidence 7 78885443
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=213.76 Aligned_cols=269 Identities=18% Similarity=0.249 Sum_probs=227.6
Q ss_pred heeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEe
Q psy6127 134 IVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRV 213 (515)
Q Consensus 134 ~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~ 213 (515)
.+.+|..+.++ .++|..+.+.+.+++||...+..+.+.+..... .+++.+..|++|. +..-.+
T Consensus 233 ~ilTGG~d~~a----------v~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v-----~~aSad~~i~vws--~~~~s~ 295 (506)
T KOG0289|consen 233 KILTGGEDKTA----------VLFDKPSNQILATLKGHTKKITSVKFHKDLDTV-----ITASADEIIRVWS--VPLSSE 295 (506)
T ss_pred cceecCCCCce----------EEEecchhhhhhhccCcceEEEEEEeccchhhe-----eecCCcceEEeec--cccccC
Confidence 44477777666 899999999999999998888888888876533 5778889999999 666667
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC--CCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS--KKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
....+.|..+|+.+..+|.|.||++++.||+....|++++..+..... ..-.+++.+|+|||. ++++|..|+.+++
T Consensus 296 ~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgL--ifgtgt~d~~vki 373 (506)
T KOG0289|consen 296 PTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGL--IFGTGTPDGVVKI 373 (506)
T ss_pred ccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCce--EEeccCCCceEEE
Confidence 788999999999999999999999999999999999999988776654 334689999999984 5556668999999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEEEECC
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~g~~d 369 (515)
||+.++..+..|.+|+++|..++|+.+|-+|++++.|+.|++||+|..+...++..... +.+++|++.|.+++.++.+
T Consensus 374 wdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~ 453 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSD 453 (506)
T ss_pred EEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecce
Confidence 99999999999999999999999999999999999999999999999998888866554 8999999999999999776
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
=+|++++-.+... ........|.+..+++.|....+++++++.|..++++.+
T Consensus 454 l~Vy~~~k~~k~W---~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 454 LQVYICKKKTKSW---TEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred eEEEEEecccccc---eeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 6666665443222 244444566677889999999999999999999888754
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-25 Score=222.57 Aligned_cols=315 Identities=14% Similarity=0.221 Sum_probs=250.6
Q ss_pred CCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecC
Q psy6127 195 RSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 195 ~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 274 (515)
++..+-.++|+ +++.+.+.+++++...|+++.=+|-=..+|.|..+|+|.++|++.++.+.+++...+.|+.++|..|
T Consensus 178 Gs~~G~lql~N--vrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtD 255 (910)
T KOG1539|consen 178 GSSQGRLQLWN--VRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTD 255 (910)
T ss_pred eecCCcEEEEE--eccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccC
Confidence 55667789999 9999999999999999999999998889999999999999999999999999977799999999999
Q ss_pred CCeEEEEEeeCCCeEEEEECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe----EEEE-ecC
Q psy6127 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN----VGMI-QLS 348 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~----~~~~-~~~ 348 (515)
|..+++.+ +..|.+.+||++..+.+.... .|.+.|....|.|....+++++.|+.+++|=.+++.- ++.. .|.
T Consensus 256 G~p~las~-~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs 334 (910)
T KOG1539|consen 256 GNPLLASG-RSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHS 334 (910)
T ss_pred CCeeEEec-cCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCC
Confidence 99887665 468999999999988876665 7999999999999999999999999999885554332 1111 333
Q ss_pred CCeeEEEEC-CCCCEEEEEECCCcEEEEE---------------------------------------------------
Q psy6127 349 GNKPIAAYD-PEGLAFAIGVNSDSIKLYD--------------------------------------------------- 376 (515)
Q Consensus 349 ~~~~~~~~s-~~~~~l~~g~~dg~i~i~d--------------------------------------------------- 376 (515)
.+..++.|. .+|..+.+++.|++.+.|+
T Consensus 335 ~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv 414 (910)
T KOG1539|consen 335 APPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNV 414 (910)
T ss_pred CCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcce
Confidence 445555554 4555555555555555554
Q ss_pred --------------eecCCCCCceeeec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCC
Q psy6127 377 --------------VRSYDKGPFASFKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441 (515)
Q Consensus 377 --------------~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 441 (515)
.++........... .......+++++.++.|++.+.|+..|.|-+|++.+|-....+.....+..
T Consensus 415 ~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~ 494 (910)
T KOG1539|consen 415 ITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKG 494 (910)
T ss_pred eEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccC
Confidence 33322111000000 111335688999999999999999999999999999988888865556777
Q ss_pred CCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE-----------------------------------------EcC
Q psy6127 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV-----------------------------------------LDG 480 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~-----------------------------------------~~~ 480 (515)
+|+.++...-++.+++++.+|.+.+||.....++.. +.+
T Consensus 495 ~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~g 574 (910)
T KOG1539|consen 495 EVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWG 574 (910)
T ss_pred ceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhc
Confidence 799999999999999999999999999876543222 234
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 481 DHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 481 ~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
|.+.|++++|||||++|++++.| +|+||+.++
T Consensus 575 -h~nritd~~FS~DgrWlisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 575 -HGNRITDMTFSPDGRWLISASMDSTIRTWDLPTG 608 (910)
T ss_pred -cccceeeeEeCCCCcEEEEeecCCcEEEEeccCc
Confidence 99999999999999999999865 999999865
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=223.53 Aligned_cols=362 Identities=19% Similarity=0.238 Sum_probs=266.9
Q ss_pred hheeecccccccccccCCCCcCCCcch--hhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDF--ELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRS 210 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~ 210 (515)
-++|.|..+..| .++.- ...+.+..++||..-+..+.|..... ...+..|++.|..|++|. +..
T Consensus 160 ~lla~Ggs~~~v----------~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~--~~~~laS~SQD~yIRiW~--i~~ 225 (764)
T KOG1063|consen 160 FLLACGGSKFVV----------DLYSSSADSFARVAELEGHTDWIRSLAFARLGG--DDLLLASSSQDRYIRIWR--IVL 225 (764)
T ss_pred EEEEecCcceEE----------EEeccCCcceeEEEEeeccchhhhhhhhhccCC--CcEEEEecCCceEEEEEE--EEe
Confidence 467787777766 33322 24567888999955565555554332 112455999999999996 322
Q ss_pred eE---------------------ee----------eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee--ee
Q psy6127 211 YR---------------------VA----------KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS--KN 257 (515)
Q Consensus 211 ~~---------------------~~----------~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~--~~ 257 (515)
+. +. ..+.||.+.|+++.|+|++..|+++|.|.++.+|...+..- +.
T Consensus 226 ~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~ 305 (764)
T KOG1063|consen 226 GDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVD 305 (764)
T ss_pred cCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEE
Confidence 22 11 23459999999999999999999999999999998765422 22
Q ss_pred -----EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC---eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC
Q psy6127 258 -----TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN---KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329 (515)
Q Consensus 258 -----~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg 329 (515)
...+...+.....|+|+++.++.- +..|..++|..... .......||.+.|++++|.|.|.+|++.|.|.
T Consensus 306 ~vRlGe~gg~a~GF~g~lw~~n~~~ii~~--g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQ 383 (764)
T KOG1063|consen 306 VVRLGEVGGSAGGFWGGLWSPNSNVIIAH--GRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQ 383 (764)
T ss_pred EEEeecccccccceeeEEEcCCCCEEEEe--cccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEecccc
Confidence 223345568899999999655543 47999999983322 23344679999999999999999999999999
Q ss_pred cEEEEEcCCCC-eEEEE----ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec-------------------------
Q psy6127 330 TVRVWDLRQPN-NVGMI----QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS------------------------- 379 (515)
Q Consensus 330 ~i~iwd~~~~~-~~~~~----~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~------------------------- 379 (515)
+-|++-.-..+ .-..+ .|.....|+++-+....+++|..+..+|+|+...
T Consensus 384 TTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~ 463 (764)
T KOG1063|consen 384 TTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGAN 463 (764)
T ss_pred ceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccc
Confidence 99998755222 12222 2344578899988778899999999999997532
Q ss_pred ------------------CCC------CC----------------------ceeeecCCCCCcCeEEEEEcCCCCEEEEE
Q psy6127 380 ------------------YDK------GP----------------------FASFKCPGERGCEWTGLKFSPDGKLILVS 413 (515)
Q Consensus 380 ------------------~~~------~~----------------------~~~~~~~~~~~~~i~~l~~sp~~~~l~~~ 413 (515)
+.. .+ ........+|...|.+++.+|+++.+|++
T Consensus 464 VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASa 543 (764)
T KOG1063|consen 464 VPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASA 543 (764)
T ss_pred cccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeeh
Confidence 000 00 00111224677789999999999999998
Q ss_pred ECCC-----cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE----EEEEcCCCCC
Q psy6127 414 TNGS-----IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK----VCVLDGDHPS 484 (515)
Q Consensus 414 s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~----~~~~~~~h~~ 484 (515)
+... .|++|+..+......+.+|.-. |+.++|||||++|++.+.|.++.+|....... ....+. |..
T Consensus 544 CKS~~~ehAvI~lw~t~~W~~~~~L~~HsLT---VT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~-HtR 619 (764)
T KOG1063|consen 544 CKSSLKEHAVIRLWNTANWLQVQELEGHSLT---VTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKA-HTR 619 (764)
T ss_pred hhhCCccceEEEEEeccchhhhheecccceE---EEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccc-cce
Confidence 8543 5899999998888888876554 99999999999999999999999999754422 122344 999
Q ss_pred CeEEEEECCCCCEEEEeeCC--EEEEcCCCCC
Q psy6127 485 AVQSLQFNPKYHMLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 485 ~V~~l~~sp~~~~las~~~d--v~iW~~~~~~ 514 (515)
-|++..|+|++.++||+|.| +++|..+..+
T Consensus 620 IIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~ 651 (764)
T KOG1063|consen 620 IIWDCSWSPDEKYFATASRDKKVKVWEEPDLR 651 (764)
T ss_pred EEEEcccCcccceeEEecCCceEEEEeccCch
Confidence 99999999999999999987 9999987663
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=214.85 Aligned_cols=281 Identities=19% Similarity=0.243 Sum_probs=217.5
Q ss_pred cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEe-----------------eeec-cccCCcEEE
Q psy6127 165 LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRV-----------------AKVF-RENTDKINS 226 (515)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~-----------------~~~~-~~h~~~I~~ 226 (515)
......|+..+.++.+.+... ..++++.++.|.-|+ +.+++. .+.- ++|...|.+
T Consensus 135 ~~~~~~H~~s~~~vals~d~~-----~~fsask~g~i~kw~--v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~ 207 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDK-----RVFSASKDGTILKWD--VLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILT 207 (479)
T ss_pred ceeeccccCcceEEEeecccc-----ceeecCCCcceeeee--hhcCcccccccccchhhhhccCCCCcccccccceeEE
Confidence 445566655555554444332 235777777777776 333321 1112 389999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC
Q psy6127 227 LDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH 306 (515)
Q Consensus 227 l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h 306 (515)
++.||||+|||+|+.|..|.||+.++.+.++.+.+|.+.|.+++|-.....+++++ .|++|++|+++....+.++.+|
T Consensus 208 ~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s--~Drsvkvw~~~~~s~vetlyGH 285 (479)
T KOG0299|consen 208 LAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSAS--ADRSVKVWSIDQLSYVETLYGH 285 (479)
T ss_pred EEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeee--cCCceEEEehhHhHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999998888888776 7999999999999999999999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 386 (515)
.+.|.++.....++.+-.|+.|+++++|++.....+....+.+.+.|++|-. ...+++|+.+|.|.+|++...+ +..
T Consensus 286 qd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKk--plf 362 (479)
T KOG0299|consen 286 QDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKK--PLF 362 (479)
T ss_pred ccceeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeecccC--cee
Confidence 9999999998888888888899999999995554444445566788888874 4578999999999999998744 222
Q ss_pred eeecC---------CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce-eEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 387 SFKCP---------GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC-VQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 387 ~~~~~---------~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
..... ..++..|++++..|...++++|+.+|.|++|-+..+-. +..+. ...-.+.|++++|+++|+.++
T Consensus 363 ~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~-~ls~~GfVNsl~f~~sgk~iv 441 (479)
T KOG0299|consen 363 TSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLY-SLSLVGFVNSLAFSNSGKRIV 441 (479)
T ss_pred EeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceee-ecccccEEEEEEEccCCCEEE
Confidence 22111 11223799999999999999999999999999988732 22222 222445599999999999776
Q ss_pred EE
Q psy6127 457 SG 458 (515)
Q Consensus 457 sg 458 (515)
+|
T Consensus 442 ag 443 (479)
T KOG0299|consen 442 AG 443 (479)
T ss_pred Ee
Confidence 66
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-25 Score=186.68 Aligned_cols=297 Identities=14% Similarity=0.224 Sum_probs=223.8
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC------CCe-----e----eeEecCCCCceeEEEEec
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE------QGT-----S----KNTINSKKYGVDLIKFTH 273 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~------~~~-----~----~~~~~~~~~~v~~~~~~~ 273 (515)
+.+.++.++.. +..|.+++|+|.|.+.|.|+...+.+|-... .+. + -+.-+.|.+.|.|.+|+|
T Consensus 21 ~~f~~i~~l~d-sqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 21 KHFEAINILED-SQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred cceEEEEEecc-hhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 34556665544 6789999999999999999999999986432 111 1 122346789999999999
Q ss_pred CCCeEEEEEeeCCCeEEEEECCCCee-----eEEecCCCCCeEEEEEcCC----CCEEEEEe-CCCcEEEEEcCCCCeEE
Q psy6127 274 SKTTAIHASTKVDATLRYLSLHDNKY-----VRYFPGHVRKVSSLNLSPV----DDSFISGS-YDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 274 ~~~~l~~~s~~~d~~v~vwd~~~~~~-----~~~~~~h~~~v~~l~~~~~----~~~l~s~s-~dg~i~iwd~~~~~~~~ 343 (515)
+|..++. |+.|.+|++.-++...+ -..+.-|.+.|..++|..+ +..|++++ .|..|.+-|...|+...
T Consensus 100 ~geliat--gsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~ 177 (350)
T KOG0641|consen 100 CGELIAT--GSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFH 177 (350)
T ss_pred ccCeEEe--cCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcce
Confidence 9986654 45899999987754433 2346779999999999754 34677665 46677778888898888
Q ss_pred EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce--eeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEE
Q psy6127 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA--SFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRL 421 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~--~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~i 421 (515)
.+..+..---.-++-+|-.+++|+.|.+|++||++........ .+...+...+.|.+++..|.|+.|++|-.|....+
T Consensus 178 a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~l 257 (350)
T KOG0641|consen 178 ALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCML 257 (350)
T ss_pred eecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEE
Confidence 7755443333345557889999999999999999975411100 11111223467999999999999999999999999
Q ss_pred EECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC---eEEEEEcCCCCCCeEEEEECCCCCEE
Q psy6127 422 FDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG---YKVCVLDGDHPSAVQSLQFNPKYHML 498 (515)
Q Consensus 422 wd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~---~~~~~~~~~h~~~V~~l~~sp~~~~l 498 (515)
||++.++.++.+..|... |.++.|+|...|+.+++.|..|++-|++.. ++.....+.|.+.+..+.|+|...-+
T Consensus 258 ydirg~r~iq~f~phsad---ir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sf 334 (350)
T KOG0641|consen 258 YDIRGGRMIQRFHPHSAD---IRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSF 334 (350)
T ss_pred EEeeCCceeeeeCCCccc---eeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCcccee
Confidence 999999999988775544 999999999999999999999999998632 22222223599999999999988777
Q ss_pred EEeeCC--EEEEcCC
Q psy6127 499 ASACSN--MAFWIPT 511 (515)
Q Consensus 499 as~~~d--v~iW~~~ 511 (515)
++.+.| ..+|-++
T Consensus 335 isssadkt~tlwa~~ 349 (350)
T KOG0641|consen 335 ISSSADKTATLWALN 349 (350)
T ss_pred eeccCcceEEEeccC
Confidence 777654 9999765
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=223.68 Aligned_cols=281 Identities=19% Similarity=0.270 Sum_probs=232.3
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEecCCCCceeE-EEEecCCCeEEEEEeeCC
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTINSKKYGVDL-IKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~~~~~~~v~~-~~~~~~~~~l~~~s~~~d 286 (515)
.+++.+.+.||+..|..+++.+.. .++++|.||++++|+-..++.+ ..+.+|.+-|.. ++|.+..+..++. |+.|
T Consensus 3 ~Y~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~-g~~D 80 (745)
T KOG0301|consen 3 QYKLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVV-GGMD 80 (745)
T ss_pred cceeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEe-eccc
Confidence 467788999999999999987654 8999999999999997655443 446677777777 8887644433333 3589
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEE
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~ 365 (515)
.++.+|...+..+..++++|...|.+++...++. +++||.|.++++|-.. ++...+ .|...+..+..-|++ .+++
T Consensus 81 ~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~-~~vT 156 (745)
T KOG0301|consen 81 TTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN-TYVT 156 (745)
T ss_pred ceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecch--hhhcccCCcchheeeeeecCCC-cEEe
Confidence 9999999999999999999999999999888777 9999999999999754 334334 555668888888888 8999
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
|+.|.+|++|.-.+ ..+...+|...|+++++-|++ .+++++.||.|+.|++ +|.++..+.+|... +.+
T Consensus 157 gsaDKtIklWk~~~-------~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~---vYs 224 (745)
T KOG0301|consen 157 GSADKTIKLWKGGT-------LLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNF---VYS 224 (745)
T ss_pred ccCcceeeeccCCc-------hhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceE---EEE
Confidence 99999999998754 666677899999999999886 5678999999999998 89999999887776 899
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-CCEEEEcCC
Q psy6127 446 ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-SNMAFWIPT 511 (515)
Q Consensus 446 ~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~ 511 (515)
+...+++..++++++|++++||+.. ++.+.+.- ..-.|+++.+-++|.+++.+| |-+|||..+
T Consensus 225 is~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~l-PttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 225 ISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITL-PTTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred EEecCCCCeEEEecCCceEEEeecC--ceEEEEec-CccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 9988888999999999999999976 77777763 334899999999998776665 449999776
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-27 Score=207.03 Aligned_cols=295 Identities=16% Similarity=0.257 Sum_probs=236.5
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
.+..+.+.||...+..++.....+ +..+.+-|.+..+|. +++++|+.++.||.+.|++++|++.+.+++++|.
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqp-----i~gtASADhTA~iWs--~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG 210 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQP-----ICGTASADHTARIWS--LESGACLATYTGHTGSVNSIKFHNSGLLLLTASG 210 (481)
T ss_pred EeehhhhcccccceeeehhhcCCc-----ceeecccccceeEEe--eccccceeeecccccceeeEEeccccceEEEccC
Confidence 345667788876666666554433 344778899999999 9999999999999999999999999999999999
Q ss_pred CCeEEEEEC------CCC----------------------------------eeeeEecCCCCceeEEEEecCCCeEEEE
Q psy6127 242 DDQIIIYDC------EQG----------------------------------TSKNTINSKKYGVDLIKFTHSKTTAIHA 281 (515)
Q Consensus 242 dg~i~iwd~------~~~----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 281 (515)
|++..||.. ... .++..+.+|...|.+..|...++.++.+
T Consensus 211 D~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTa 290 (481)
T KOG0300|consen 211 DETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTA 290 (481)
T ss_pred CcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeee
Confidence 999999961 110 1344578899999999999999998887
Q ss_pred EeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-CeEEEE-ecCCCeeEEEECCC
Q psy6127 282 STKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP-NNVGMI-QLSGNKPIAAYDPE 359 (515)
Q Consensus 282 s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~-~~~~~~~~~~~s~~ 359 (515)
+ .|.+..+||+++++.+..+.||....+.++-+|..+++++++.|.+.++||.+.. ..+..| .+...++++.|..+
T Consensus 291 S--WDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d 368 (481)
T KOG0300|consen 291 S--WDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD 368 (481)
T ss_pred e--ccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC
Confidence 6 8999999999999999999999999999999999999999999999999999843 234455 34456888888865
Q ss_pred CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee--ccc
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS--GVL 437 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~--~~~ 437 (515)
. .+++|+.|.+|++||+++.... ...+ ...++++.++.+..+..|+.-..+..|++||+.... +..++ ...
T Consensus 369 d-~vVSgSDDrTvKvWdLrNMRsp-lATI----RtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~R-laRlPrtsRq 441 (481)
T KOG0300|consen 369 D-RVVSGSDDRTVKVWDLRNMRSP-LATI----RTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNR-LARLPRTSRQ 441 (481)
T ss_pred C-ceeecCCCceEEEeeeccccCc-ceee----ecCCccceeEeecCCceEEeccCCceEEEEecCCCc-cccCCccccc
Confidence 5 6789999999999999986532 2222 234577899999988899998899999999985443 33333 233
Q ss_pred cCCCCCEEEEEecCC--CEEEEEeCCCcEEEEECCCC
Q psy6127 438 NNNASPLEATFTPDS--QFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g--~~l~sgs~dg~I~iwd~~~~ 472 (515)
+|..-|.|++|..+. .-|++++.|..+.=|++...
T Consensus 442 gHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 442 GHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred ccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 455558999998654 35788999999999998654
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-25 Score=210.92 Aligned_cols=270 Identities=15% Similarity=0.164 Sum_probs=207.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEE
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSS 312 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 312 (515)
++.+++++.|+.+++||..+++....+..+. .+..++|+|++..++++. +.++.|++||..+++....+..+.. +..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~-~~~~~v~~~d~~~~~~~~~~~~~~~-~~~ 77 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCA-SDSDTIQVIDLATGEVIGTLPSGPD-PEL 77 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEE-CCCCeEEEEECCCCcEEEeccCCCC-ccE
Confidence 3578899999999999999999888887654 467899999998765554 4689999999999988877765544 567
Q ss_pred EEEcCCCCEEEEE-eCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCC-cEEEEEeecCCCCCceeeec
Q psy6127 313 LNLSPVDDSFISG-SYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD-SIKLYDVRSYDKGPFASFKC 390 (515)
Q Consensus 313 l~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-~i~i~d~~~~~~~~~~~~~~ 390 (515)
++|+|+++.++++ +.|+.+++||+++++.+..+.....+..++|+|+++.++++..++ .+.+||.++... .....
T Consensus 78 ~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~--~~~~~- 154 (300)
T TIGR03866 78 FALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEI--VDNVL- 154 (300)
T ss_pred EEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeE--EEEEE-
Confidence 8999999977654 568999999999988887776555578899999999999988765 467778876431 11111
Q ss_pred CCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeecccc----CCCCCEEEEEecCCCEEEEE-eCCCcE
Q psy6127 391 PGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLN----NNASPLEATFTPDSQFVASG-STDGQV 464 (515)
Q Consensus 391 ~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~----~~~~i~~~~~sp~g~~l~sg-s~dg~I 464 (515)
.......++|+|+++++++++ .++.|++||+.+++.+..+..... .......++|+|++++++++ +.++.+
T Consensus 155 ---~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i 231 (300)
T TIGR03866 155 ---VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRV 231 (300)
T ss_pred ---cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeE
Confidence 112345799999999886554 689999999999987776643211 11124578899999986554 456789
Q ss_pred EEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee---CCEEEEcCCCC
Q psy6127 465 HIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC---SNMAFWIPTLS 513 (515)
Q Consensus 465 ~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~---~dv~iW~~~~~ 513 (515)
.+||..+++.+..+. +...+.+++|+|++++|++++ +++++||+...
T Consensus 232 ~v~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~ 281 (300)
T TIGR03866 232 AVVDAKTYEVLDYLL--VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAAL 281 (300)
T ss_pred EEEECCCCcEEEEEE--eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCC
Confidence 999999988877664 445799999999999988763 45999998754
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-27 Score=205.91 Aligned_cols=293 Identities=18% Similarity=0.220 Sum_probs=226.7
Q ss_pred cccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccce----------------eeeeEeeeeccccCCcEEEEEEc
Q psy6127 167 SLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENL----------------VRSYRVAKVFRENTDKINSLDYS 230 (515)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~----------------~~~~~~~~~~~~h~~~I~~l~~s 230 (515)
.+..|..++.+-.|.+... |..+++-|..|++.|-. ......+++|-.|.++|+++.|+
T Consensus 107 ylt~HK~~cR~aafs~DG~-----lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH 181 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGS-----LVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH 181 (430)
T ss_pred EEeecccceeeeeeCCCCc-----EEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec
Confidence 3445655566555555432 55688888889987621 01124567899999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeeeeEe--cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe---cC
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQGTSKNTI--NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF---PG 305 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~---~~ 305 (515)
|....|++|+.|++|+++|.......+.+ -....+|.++.|+|.|.++++++ .-.++++||+++-++...- .+
T Consensus 182 Pre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgT--dHp~~rlYdv~T~QcfvsanPd~q 259 (430)
T KOG0640|consen 182 PRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGT--DHPTLRLYDVNTYQCFVSANPDDQ 259 (430)
T ss_pred chhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEec--CCCceeEEeccceeEeeecCcccc
Confidence 99999999999999999999764433322 23457899999999999998887 5789999999998876543 46
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE---ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCC
Q psy6127 306 HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI---QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDK 382 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~ 382 (515)
|++.|+++.+++.++..++|+.||.|++||--+++|+.++ +....+.+..|..+|+++++.+.|..+++|.+.+++.
T Consensus 260 ht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~ 339 (430)
T KOG0640|consen 260 HTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRM 339 (430)
T ss_pred cccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCce
Confidence 9999999999999999999999999999999999999888 3334588899999999999999999999999998652
Q ss_pred CCceeeecCC--CCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 383 GPFASFKCPG--ERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 383 ~~~~~~~~~~--~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
. ......+ +...--+...|+....|++.-. ..+.+.-||.+++.....+.. +|.+.+..+.-||.+.-+++++
T Consensus 340 l--~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~sl--gHn~a~R~i~HSP~~p~FmTcs 415 (430)
T KOG0640|consen 340 L--KEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSL--GHNGAVRWIVHSPVEPAFMTCS 415 (430)
T ss_pred E--EEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhccc--CCCCCceEEEeCCCCCceeeec
Confidence 1 1111111 1111123456777777777655 357899999999877665542 4666799999999999999999
Q ss_pred CCCcEEEEECC
Q psy6127 460 TDGQVHIWNAE 470 (515)
Q Consensus 460 ~dg~I~iwd~~ 470 (515)
.|-.+++|--+
T Consensus 416 dD~raRFWyrr 426 (430)
T KOG0640|consen 416 DDFRARFWYRR 426 (430)
T ss_pred ccceeeeeeec
Confidence 99999999643
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=215.87 Aligned_cols=288 Identities=20% Similarity=0.240 Sum_probs=216.5
Q ss_pred ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccc-----eeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 168 LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSEN-----LVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~-----~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
+++|...|.++.+++..... .+++-|..+++||- ..+.++.+.- .-...|.+++|++.|..+++.+..
T Consensus 163 l~hgtk~Vsal~~Dp~GaR~-----~sGs~Dy~v~~wDf~gMdas~~~fr~l~P--~E~h~i~sl~ys~Tg~~iLvvsg~ 235 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGARF-----VSGSLDYTVKFWDFQGMDASMRSFRQLQP--CETHQINSLQYSVTGDQILVVSGS 235 (641)
T ss_pred ccCCceEEEEeeecCCCcee-----eeccccceEEEEecccccccchhhhccCc--ccccccceeeecCCCCeEEEEecC
Confidence 55666668888887765432 48999999999982 1122222222 345589999999999998888888
Q ss_pred CeEEEEECCCCeeeeE------------ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee-eEEe-----c
Q psy6127 243 DQIIIYDCEQGTSKNT------------INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY-VRYF-----P 304 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~------------~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~-~~~~-----~ 304 (515)
...+|+|....+.... -++|...++|.+|+|..+..++.+ +.||++++||+...+. ...+ .
T Consensus 236 aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~-s~DgtlRiWdv~~~k~q~qVik~k~~~ 314 (641)
T KOG0772|consen 236 AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTC-SYDGTLRIWDVNNTKSQLQVIKTKPAG 314 (641)
T ss_pred cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEe-cCCCcEEEEecCCchhheeEEeeccCC
Confidence 9999999764333222 358889999999999988777665 5899999999976542 2222 2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE----ecC--CCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 305 GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI----QLS--GNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 305 ~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~--~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
+..-+++.++|+||++.||+|+.||.|.+|+..+...-..+ .|. ..+++++||++|++|++-+.|+++++||++
T Consensus 315 g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 315 GKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred CcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence 34457899999999999999999999999998654332222 222 359999999999999999999999999999
Q ss_pred cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 379 SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
..++........+ ...+-+.++|||+.+.|++|+. .|.+.+||..+...+..+... ...|..+.|+|.=
T Consensus 395 q~kkpL~~~tgL~--t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~---~aSvv~~~WhpkL 469 (641)
T KOG0772|consen 395 QFKKPLNVRTGLP--TPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS---TASVVRCLWHPKL 469 (641)
T ss_pred ccccchhhhcCCC--ccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC---CceEEEEeecchh
Confidence 8764332222211 2223457999999999999863 467999999998888877654 3448899999998
Q ss_pred CEEEEEeCCCcEEEEE
Q psy6127 453 QFVASGSTDGQVHIWN 468 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd 468 (515)
+.|++|+.||.+++|=
T Consensus 470 NQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 470 NQIFAGSGDGTAHVYY 485 (641)
T ss_pred hheeeecCCCceEEEE
Confidence 8888999999999863
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-27 Score=226.21 Aligned_cols=281 Identities=18% Similarity=0.250 Sum_probs=230.7
Q ss_pred ccCCcEE---EEEEcC-CCCEEEEEeCCCeEEEEECCCCe------eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 219 ENTDKIN---SLDYSS-DGSLLISCSDDDQIIIYDCEQGT------SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 219 ~h~~~I~---~l~~sp-d~~~lasgs~dg~i~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
.|...|. .+..++ .+++|+|||.||.|++|+..... ....++.|...|+.+....+++.++.++ .|-+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~S--sDtT 96 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISAS--SDTT 96 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEec--CCce
Confidence 3444555 444444 67789999999999999986422 3667889999999999999999888776 6999
Q ss_pred EEEEECCCC--eeeEEecCCCCCeEEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCe--EEEE----------ecCCCeeE
Q psy6127 289 LRYLSLHDN--KYVRYFPGHVRKVSSLNL-SPVDDSFISGSYDKTVRVWDLRQPNN--VGMI----------QLSGNKPI 353 (515)
Q Consensus 289 v~vwd~~~~--~~~~~~~~h~~~v~~l~~-~~~~~~l~s~s~dg~i~iwd~~~~~~--~~~~----------~~~~~~~~ 353 (515)
|++|+...+ -+..++..|.+.|.|++. .++...+|+||-|+.|.+||++++.. +..+ ....++.+
T Consensus 97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYS 176 (735)
T KOG0308|consen 97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYS 176 (735)
T ss_pred EEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceee
Confidence 999999877 577888999999999999 88888999999999999999998732 2221 22345788
Q ss_pred EEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEe
Q psy6127 354 AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~ 433 (515)
++.++.|..++.|+.++.+++||.++.+ ......+|...|..+..++||..+++++.||+|++||+...+|+.++
T Consensus 177 LA~N~t~t~ivsGgtek~lr~wDprt~~-----kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~ 251 (735)
T KOG0308|consen 177 LAMNQTGTIIVSGGTEKDLRLWDPRTCK-----KIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATY 251 (735)
T ss_pred eecCCcceEEEecCcccceEEecccccc-----ceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeE
Confidence 9999999999999999999999999865 33334588999999999999999999999999999999999999999
Q ss_pred eccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC-eEEEEEcCCCCCCeEEEEECC--CCCEEEEeeCCEEEEcC
Q psy6127 434 SGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG-YKVCVLDGDHPSAVQSLQFNP--KYHMLASACSNMAFWIP 510 (515)
Q Consensus 434 ~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~-~~~~~~~~~h~~~V~~l~~sp--~~~~las~~~dv~iW~~ 510 (515)
..|... ++++..+|+-.++++|+.||.|..=|+.+. ++...+. ...+|..+..+. ++.++++.+++++-|..
T Consensus 252 ~vH~e~---VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick--~daPv~~l~~~~~~~~~WvtTtds~I~rW~~ 326 (735)
T KOG0308|consen 252 IVHKEG---VWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICK--EDAPVLKLHLHEHDNSVWVTTTDSSIKRWKL 326 (735)
T ss_pred EeccCc---eEEEeeCCCcceEEecCCCCcEEecccCCchhheEeec--CCCchhhhhhccccCCceeeeccccceecCC
Confidence 887655 999999999999999999999999999884 4444444 455677777763 44477777888888876
Q ss_pred C
Q psy6127 511 T 511 (515)
Q Consensus 511 ~ 511 (515)
.
T Consensus 327 ~ 327 (735)
T KOG0308|consen 327 E 327 (735)
T ss_pred c
Confidence 4
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-25 Score=185.24 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=203.2
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee-----eeEecCCCCceeEEEEecC---CCeEEEEEeeCC
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS-----KNTINSKKYGVDLIKFTHS---KTTAIHASTKVD 286 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~~---~~~l~~~s~~~d 286 (515)
+.-+.|.+.|.|.+|+|+|.++|+|+.|.+|++.-.....+ -..+..|.+.|..++|..+ +..++...|..|
T Consensus 83 kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd 162 (350)
T KOG0641|consen 83 KRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD 162 (350)
T ss_pred eeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence 34567999999999999999999999999999976654322 2457789999999999754 334444444568
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec--------CCCeeEEEECC
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL--------SGNKPIAAYDP 358 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~~s~ 358 (515)
..|++-|..+|+..+.+.+|++.|.++- +.+|-.+++|+.|.+|++||++-..++.++.. ...+..++++|
T Consensus 163 c~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp 241 (350)
T KOG0641|consen 163 CKIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP 241 (350)
T ss_pred ceEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECC
Confidence 8999999999999999999999998763 33488999999999999999999999888732 13478899999
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----ceeEEee
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG----NCVQSLS 434 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~----~~~~~~~ 434 (515)
.|+++++|-.|....+||++.++ .++....|...|+++.|+|...|+++++.|..|++-|+... -++....
T Consensus 242 sgrll~sg~~dssc~lydirg~r-----~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ 316 (350)
T KOG0641|consen 242 SGRLLASGHADSSCMLYDIRGGR-----MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVA 316 (350)
T ss_pred CcceeeeccCCCceEEEEeeCCc-----eeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEE
Confidence 99999999999999999999876 66666788999999999999999999999999999997532 1122222
Q ss_pred ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 435 ~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
. +...+..+.|+|..--+++.+.|.++.+|-+.
T Consensus 317 e---hkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 317 E---HKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred e---ccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 3 44448889999999888999999999999764
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-26 Score=220.00 Aligned_cols=280 Identities=19% Similarity=0.238 Sum_probs=229.3
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEE-EEEcC-CCCEEEEEeC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINS-LDYSS-DGSLLISCSD 241 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~-l~~sp-d~~~lasgs~ 241 (515)
.-+.+++|..-|..+...+.. ...+++.|+++++|+..-+.|-..+.+.+|.+.|.+ ++|-+ ++-.+++|+.
T Consensus 6 ls~~l~gH~~DVr~v~~~~~~------~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~ 79 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDGV------CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGM 79 (745)
T ss_pred eEEEeccCccchheeEecCCe------EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecc
Confidence 345677886655555555444 445889999999999777777777889999999988 88886 5556999999
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
|++|.+|......+..++++|...|.+++...++. +.+|+.|.++++|-. +++...+++|+..|++++.-|++ .
T Consensus 80 D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~---~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~ 153 (745)
T KOG0301|consen 80 DTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT---LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-T 153 (745)
T ss_pred cceEEEEecCCCCchhhhhccccceeeeecCCcCc---eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-c
Confidence 99999999999999999999999999999877775 445679999999965 56677799999999999999987 8
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEE
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTG 400 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~ 400 (515)
++|||.|.+|++|.- ++.++++. |.+-++.+++-+++ .|++++.||.|+.|++.. + .+....+|..-+.+
T Consensus 154 ~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~g-e-----~l~~~~ghtn~vYs 224 (745)
T KOG0301|consen 154 YVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDG-E-----VLLEMHGHTNFVYS 224 (745)
T ss_pred EEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccC-c-----eeeeeeccceEEEE
Confidence 999999999999975 66777774 44558889988775 467788999999999954 3 55556688889999
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 401 LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 401 l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
++..+++..++++++|+++++|+.. .+.+.+..... .++++.+-++|. +++|+.||.||||...
T Consensus 225 is~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPtt---siWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 225 ISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTT---SIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred EEecCCCCeEEEecCCceEEEeecC--ceEEEEecCcc---ceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 9988888899999999999999966 77777764332 389999988887 5567889999999876
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=223.55 Aligned_cols=323 Identities=19% Similarity=0.212 Sum_probs=241.6
Q ss_pred hhheeecccccccccccCCCCcCCCcchhhcc------ccccccCC-cee-EEEEEEeeccccceeeeeeeCCCCcEEEE
Q psy6127 132 LKIVAKSENMCNLTKLDLPYNKLGSWDFELLH------SLSSLESP-HFV-SLFVTFVSRVLTMAASLAHSRSSRTITKC 203 (515)
Q Consensus 132 ~~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~------~l~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~s~~~~~~i~~ 203 (515)
-++|.+|..+|.| ++|+..... .+.+++.| .|+ -...+-.++. + .|++.|.+|++
T Consensus 37 ~ryLfTgGRDg~i----------~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~t------l-IS~SsDtTVK~ 99 (735)
T KOG0308|consen 37 GRYLFTGGRDGII----------RLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKT------L-ISASSDTTVKV 99 (735)
T ss_pred CceEEecCCCceE----------EEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCc------e-EEecCCceEEE
Confidence 3678899999999 999965433 36778888 443 2222222221 3 38899999999
Q ss_pred ccceeeeeEeeeeccccCCcEEEEEE-cCCCCEEEEEeCCCeEEEEECCCCee--eeE--------ec-CCCCceeEEEE
Q psy6127 204 SENLVRSYRVAKVFRENTDKINSLDY-SSDGSLLISCSDDDQIIIYDCEQGTS--KNT--------IN-SKKYGVDLIKF 271 (515)
Q Consensus 204 wd~~~~~~~~~~~~~~h~~~I~~l~~-spd~~~lasgs~dg~i~iwd~~~~~~--~~~--------~~-~~~~~v~~~~~ 271 (515)
|+.....--|+.+++.|++-|.|+++ .++...+|+||-|+.|.+||+.++.. +.+ +. ++..+|++++.
T Consensus 100 W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~ 179 (735)
T KOG0308|consen 100 WNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAM 179 (735)
T ss_pred eecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeec
Confidence 99443333688999999999999999 88899999999999999999998732 222 23 77889999999
Q ss_pred ecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCC
Q psy6127 272 THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGN 350 (515)
Q Consensus 272 ~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~ 350 (515)
++.+. ++++|+..+.+++||.++++.+..++||+..|.++..++||..++++|.||+|++||+...+|+.++. +...
T Consensus 180 N~t~t--~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~ 257 (735)
T KOG0308|consen 180 NQTGT--IIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG 257 (735)
T ss_pred CCcce--EEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCc
Confidence 99884 34455679999999999999999999999999999999999999999999999999999999999884 4455
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcee
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV 430 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~ 430 (515)
+.++..+|+=..+.+|+.||.|..=|+++.... ... .....++..+..+...+-+-+++.|+.|+-|..+....+
T Consensus 258 VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~---tli--ck~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l 332 (735)
T KOG0308|consen 258 VWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKS---TLI--CKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIAL 332 (735)
T ss_pred eEEEeeCCCcceEEecCCCCcEEecccCCchhh---eEe--ecCCCchhhhhhccccCCceeeeccccceecCCcccccc
Confidence 889999999999999999999999999985321 111 123335556666654444567778888988875432111
Q ss_pred -------EEeecccc--------------CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 431 -------QSLSGVLN--------------NNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 431 -------~~~~~~~~--------------~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
........ ...++...+.-.|.+++++-...|.+.+||+-....+..+
T Consensus 333 ~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~~~d~ 401 (735)
T KOG0308|consen 333 SVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVKVEDF 401 (735)
T ss_pred ccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeeeeeehhhc
Confidence 10000000 0112333444457789999999999999999776665544
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=195.05 Aligned_cols=274 Identities=14% Similarity=0.152 Sum_probs=215.7
Q ss_pred ceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeee-eEe-eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy6127 172 HFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRS-YRV-AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYD 249 (515)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~-~~~-~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd 249 (515)
...+.+++|.|.... +...++-|+.+++|+ ++. +.. -+....|.++|.+++|+.||..+++|+.|+.+++||
T Consensus 27 ~DsIS~l~FSP~~~~----~~~A~SWD~tVR~we--vq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 27 EDSISALAFSPQADN----LLAAGSWDGTVRIWE--VQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWD 100 (347)
T ss_pred ccchheeEeccccCc----eEEecccCCceEEEE--EecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEE
Confidence 445666666662211 333677788888888 544 222 245678999999999999999999999999999999
Q ss_pred CCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC
Q psy6127 250 CEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329 (515)
Q Consensus 250 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg 329 (515)
+.++ ....+..|..+|.++.|-+...+-.+++|+.|.+++.||.+...++.++. -.+.+.++..- ...++.+..++
T Consensus 101 L~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~--~pm~vVata~r 176 (347)
T KOG0647|consen 101 LASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVL--YPMAVVATAER 176 (347)
T ss_pred ccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhcc--CceeEEEecCC
Confidence 9998 55678889999999999998888788888999999999999999888876 45667777665 56788899999
Q ss_pred cEEEEEcCCCCeEEEE---ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC---C---CcCeEE
Q psy6127 330 TVRVWDLRQPNNVGMI---QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE---R---GCEWTG 400 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~---~---~~~i~~ 400 (515)
.|.+|+++.+...... +....+++++..++....+.|+-+|.+.+..+.......-..+++... . -..|++
T Consensus 177 ~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNs 256 (347)
T KOG0647|consen 177 HIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNS 256 (347)
T ss_pred cEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecc
Confidence 9999999876544322 344558899999999889999999999999998754333334444321 1 235788
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE
Q psy6127 401 LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG 458 (515)
Q Consensus 401 l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg 458 (515)
|+|+|.-..|++++.||++.+||-.....++..+. +..+|++++|+.+|.++|-+
T Consensus 257 i~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~---~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 257 IAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSET---HPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred eEeecccceEEEecCCceEEEecchhhhhhhccCc---CCCccceeEecCCCCEEEEE
Confidence 99999999999999999999999877766666555 45559999999999988765
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-25 Score=195.27 Aligned_cols=261 Identities=16% Similarity=0.234 Sum_probs=210.9
Q ss_pred EEEEeCCCeEEEEECCC------------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe
Q psy6127 236 LISCSDDDQIIIYDCEQ------------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF 303 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~ 303 (515)
+++|+....|.-+++.- -.++..+..|.+++++++.+. .++++|+.|.+|++||+.+...+..+
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~----~~~aSGssDetI~IYDm~k~~qlg~l 79 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSG----PYVASGSSDETIHIYDMRKRKQLGIL 79 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecc----eeEeccCCCCcEEEEeccchhhhcce
Confidence 45566655555554431 123556788999999999853 35667778999999999999999999
Q ss_pred cCCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecC
Q psy6127 304 PGHVRKVSSLNLSPVDD--SFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSY 380 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~ 380 (515)
-.|.+.|+++.|.++-. .|++|+.||.|.+|+....+++..+ .+.+.++.++.+|.+++-++.+.|+.++.||+-.+
T Consensus 80 l~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~G 159 (362)
T KOG0294|consen 80 LSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRG 159 (362)
T ss_pred eccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcC
Confidence 99999999999999765 8999999999999999999988888 45566999999999999999999999999999887
Q ss_pred CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC
Q psy6127 381 DKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
+......+. + .-+.+.|+|.|.+++.+..+ .|-+|.+.+.+....+... ..+.++.|- ++..|++|++
T Consensus 160 r~a~v~~L~----~--~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~----~r~l~~~~l-~~~~L~vG~d 227 (362)
T KOG0294|consen 160 RVAFVLNLK----N--KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENP----KRILCATFL-DGSELLVGGD 227 (362)
T ss_pred ccceeeccC----C--cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcc----ccceeeeec-CCceEEEecC
Confidence 744333322 1 12359999999999888776 5899999887766655532 225666665 5678999999
Q ss_pred CCcEEEEECCCCeEEEEEcCCCCCCeEEEEE--CCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 461 DGQVHIWNAERGYKVCVLDGDHPSAVQSLQF--NPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 461 dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~--sp~~~~las~~~d--v~iW~~~~~ 513 (515)
|+.|.+||.+++.+...+.+ |...|.++.+ .|++.+|++++.| ++|||++..
T Consensus 228 ~~~i~~~D~ds~~~~~~~~A-H~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 228 NEWISLKDTDSDTPLTEFLA-HENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred CceEEEeccCCCccceeeec-chhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 99999999999999999988 9999999984 5688999999866 999999875
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-24 Score=189.42 Aligned_cols=281 Identities=17% Similarity=0.218 Sum_probs=221.5
Q ss_pred eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECC
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD--DDQIIIYDCE 251 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~--dg~i~iwd~~ 251 (515)
.+.++.|...... +. +++.|-.+++.| ...++..+++..+.-.|..++|......++.++. |.+||.-++.
T Consensus 16 ~i~sl~fs~~G~~----li-tss~dDsl~LYd--~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 16 KINSLDFSDDGLL----LI-TSSEDDSLRLYD--SLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH 88 (311)
T ss_pred ceeEEEecCCCCE----EE-EecCCCeEEEEE--cCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence 3556666555432 22 355555688888 7888999999999999999999988888887776 8999999999
Q ss_pred CCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy6127 252 QGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTV 331 (515)
Q Consensus 252 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i 331 (515)
+.+.++.+.+|...|..++.+|-++.++.++ .|++|++||++..++...+.... -..++|.|+|-.+|++...+.|
T Consensus 89 dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S--~D~tvrLWDlR~~~cqg~l~~~~--~pi~AfDp~GLifA~~~~~~~I 164 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSS--LDKTVRLWDLRVKKCQGLLNLSG--RPIAAFDPEGLIFALANGSELI 164 (311)
T ss_pred cCceEEEcCCCCceEEEEEecCCCCeEEecc--cCCeEEeeEecCCCCceEEecCC--CcceeECCCCcEEEEecCCCeE
Confidence 9999999999999999999999998766554 79999999999888877665333 3457999999999999888899
Q ss_pred EEEEcCCC--CeEEEEecC----CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC
Q psy6127 332 RVWDLRQP--NNVGMIQLS----GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP 405 (515)
Q Consensus 332 ~iwd~~~~--~~~~~~~~~----~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp 405 (515)
++||++.- .+...+... .....+.|+|+|+.++.++..+.+++.|.-.+... ..+.........--..+|+|
T Consensus 165 kLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~--~tfs~~~~~~~~~~~a~ftP 242 (311)
T KOG1446|consen 165 KLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVK--STFSGYPNAGNLPLSATFTP 242 (311)
T ss_pred EEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEe--eeEeeccCCCCcceeEEECC
Confidence 99999964 344454332 34678999999999999999999999998876522 22222222221224789999
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 406 DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 406 ~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
|++++++|+.||+|.+|++++|+.+..+.+. ...++.++.|+|....++++ +..+.+|=...
T Consensus 243 ds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~--~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~~ 304 (311)
T KOG1446|consen 243 DSKFVLSGSDDGTIHVWNLETGKKVAVLRGP--NGGPVSCVRFNPRYAMFVSA--SSNLVFWLPDE 304 (311)
T ss_pred CCcEEEEecCCCcEEEEEcCCCcEeeEecCC--CCCCccccccCCceeeeeec--CceEEEEeccc
Confidence 9999999999999999999999999998875 34458899999987777765 45688886543
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=209.29 Aligned_cols=287 Identities=17% Similarity=0.235 Sum_probs=227.3
Q ss_pred CCCcchhhccccccccCC-ceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCC
Q psy6127 154 LGSWDFELLHSLSSLESP-HFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSD 232 (515)
Q Consensus 154 ~~~wd~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd 232 (515)
+.+||..+|..+.++++. ...-.++..... .+ +..+...+..+.+|. +..-.......--.++|.|++-+|+
T Consensus 20 ~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~----~y-llsaq~~rp~l~vw~--i~k~~~~~q~~v~Pg~v~al~s~n~ 92 (476)
T KOG0646|consen 20 CIVWDLRTGTSLLQYKGSYLAQAASLTALNN----EY-LLSAQLKRPLLHVWE--ILKKDQVVQYIVLPGPVHALASSNL 92 (476)
T ss_pred eeEEecCCCceeEEecCcccccchhhhhhch----hh-eeeecccCccccccc--cCchhhhhhhcccccceeeeecCCC
Confidence 489999999999999876 222222222111 01 333556666788887 3322222222223578999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC---------CCeeeEEe
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH---------DNKYVRYF 303 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~---------~~~~~~~~ 303 (515)
|.+|+.|+..|.+++|.+.+|..+..+..|-..|+|+.|+.|+..+++++ .||.|.+|++. +-++.+.+
T Consensus 93 G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgs--kDg~V~vW~l~~lv~a~~~~~~~p~~~f 170 (476)
T KOG0646|consen 93 GYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGS--KDGAVLVWLLTDLVSADNDHSVKPLHIF 170 (476)
T ss_pred ceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecC--CCccEEEEEEEeecccccCCCccceeee
Confidence 99999998999999999999999999999999999999999999888664 89999999863 34677889
Q ss_pred cCCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCC
Q psy6127 304 PGHVRKVSSLNLSPVD--DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
..|+-+|+++...+.| .+++++|.|.++++||+..+..+..+..+..+.+++++|.++.+.+|+.+|.|.+.++....
T Consensus 171 ~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~ 250 (476)
T KOG0646|consen 171 SDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLS 250 (476)
T ss_pred ccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCC
Confidence 9999999999988753 48999999999999999999999999999999999999999999999999999998876543
Q ss_pred CCC-----------ceeeecCCCCCc--CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 382 KGP-----------FASFKCPGERGC--EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 382 ~~~-----------~~~~~~~~~~~~--~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
... -.......+|.. .|++++.+-||..|++|+.||.+++||+.+.++++++.. ..++|+.+.+
T Consensus 251 ~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~---~kgpVtnL~i 327 (476)
T KOG0646|consen 251 GQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT---SKGPVTNLQI 327 (476)
T ss_pred cccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhh---hccccceeEe
Confidence 110 111222334544 999999999999999999999999999999999998875 3344888888
Q ss_pred ecCC
Q psy6127 449 TPDS 452 (515)
Q Consensus 449 sp~g 452 (515)
.|-.
T Consensus 328 ~~~~ 331 (476)
T KOG0646|consen 328 NPLE 331 (476)
T ss_pred eccc
Confidence 6643
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-25 Score=204.22 Aligned_cols=287 Identities=13% Similarity=0.207 Sum_probs=229.6
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCE--QGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
-.++|+++.|+|....|++|+.||+++||.+. ....+..+.-...+|.+.+|.|+|...++.+ +....++.||+.+.
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s-~rrky~ysyDle~a 290 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTS-GRRKYLYSYDLETA 290 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEec-ccceEEEEeecccc
Confidence 35789999999999999999999999999886 3445667777789999999999999666555 47889999999988
Q ss_pred eeeE--EecCCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEE
Q psy6127 298 KYVR--YFPGHV-RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKL 374 (515)
Q Consensus 298 ~~~~--~~~~h~-~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i 374 (515)
+... ...++. ..+.....+|++++|+..+..|.|.+....+++.+..+...+.+..++|+.+++.|++++.+|.|.+
T Consensus 291 k~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v 370 (514)
T KOG2055|consen 291 KVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYV 370 (514)
T ss_pred ccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEE
Confidence 7543 333443 3577888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC---ceeEEeeccccCCCCCEEEEEecC
Q psy6127 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG---NCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~---~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
||++... ....+.-.+ .-.-+++|.++++.|+|+|+..|.|.|||..+. ...+.+....+-...|+++.|+||
T Consensus 371 ~nl~~~~--~~~rf~D~G--~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d 446 (514)
T KOG2055|consen 371 WNLRQNS--CLHRFVDDG--SVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHD 446 (514)
T ss_pred EecCCcc--eEEEEeecC--ccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcc
Confidence 9999853 111222111 112357899999999999999999999996532 222233333334455999999999
Q ss_pred CCEEEEEe--CCCcEEEEECCCCeEEEEEcC--CCCCCeEEEEECCCCCEEEEeeC--CEEEEcCC
Q psy6127 452 SQFVASGS--TDGQVHIWNAERGYKVCVLDG--DHPSAVQSLQFNPKYHMLASACS--NMAFWIPT 511 (515)
Q Consensus 452 g~~l~sgs--~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~sp~~~~las~~~--dv~iW~~~ 511 (515)
+++||.+| .+..+++-.+.+......++. ..-+.|+|++|+|.+-++|.|.. .+.+|.+.
T Consensus 447 ~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 447 AQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 99999887 457899999988777766654 23356999999999999999974 48888764
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=193.12 Aligned_cols=251 Identities=14% Similarity=0.157 Sum_probs=197.3
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG---TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
-..|.+.|..+...--|+.||||+.|++|+|+.+.++ +.+.++.+|.++|..++|....-.-++++++.||.|.||.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 4589999999988889999999999999999999864 4678899999999999998743334555667999999999
Q ss_pred CCCCee--eEEecCCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEEcCCC-Ce-EEE--EecCCCeeEEEECCC---C--
Q psy6127 294 LHDNKY--VRYFPGHVRKVSSLNLSPVD--DSFISGSYDKTVRVWDLRQP-NN-VGM--IQLSGNKPIAAYDPE---G-- 360 (515)
Q Consensus 294 ~~~~~~--~~~~~~h~~~v~~l~~~~~~--~~l~s~s~dg~i~iwd~~~~-~~-~~~--~~~~~~~~~~~~s~~---~-- 360 (515)
-.+++- ...+..|...|++++|.|.+ -.|++++.||.|.+.+.+.. .. ... ..|.-.+++++|.|. |
T Consensus 87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~ 166 (299)
T KOG1332|consen 87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSL 166 (299)
T ss_pred cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccc
Confidence 888853 34457899999999999974 58999999999999988765 21 112 244556899999985 4
Q ss_pred ---------CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC----CEEEEEECCCcEEEEECCCC
Q psy6127 361 ---------LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG----KLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 361 ---------~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~----~~l~~~s~dg~i~iwd~~~~ 427 (515)
+.|++|+.|..|+||+..+.... .......|...|+.++|.|.- .+|++++.||++.||..+..
T Consensus 167 ~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~---~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 167 VDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWK---LERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE 243 (299)
T ss_pred cccCcccccceeeccCCccceeeeecCCcchh---hhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence 57999999999999999875322 222357899999999999953 58999999999999987632
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
...............+..+.||+.|+.|+.++.|+.|.+|.-.
T Consensus 244 ~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 244 YEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 1111111111234458999999999999999999999999743
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-26 Score=211.27 Aligned_cols=263 Identities=18% Similarity=0.290 Sum_probs=218.9
Q ss_pred CCCCcEEEEccceee-eeEeeeecc--ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEecCCCCceeEE
Q psy6127 195 RSSRTITKCSENLVR-SYRVAKVFR--ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTINSKKYGVDLI 269 (515)
Q Consensus 195 ~~~~~~i~~wd~~~~-~~~~~~~~~--~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~ 269 (515)
..+++.|++||-.-. ...++..+. ...+.|.++...|||+.|++|+.-.++.|||+...... ..+........++
T Consensus 436 TgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyAL 515 (705)
T KOG0639|consen 436 TGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 515 (705)
T ss_pred ecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhh
Confidence 356777999993221 111222222 34678999999999999999999999999999865543 3344444567888
Q ss_pred EEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC
Q psy6127 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349 (515)
Q Consensus 270 ~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 349 (515)
+.+||.+..+.+. .||.|.|||+.+...++.|+||++.+.|+..++||..|.+|+-|++|+-||++++..+....+..
T Consensus 516 a~spDakvcFscc--sdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~S 593 (705)
T KOG0639|consen 516 AISPDAKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSS 593 (705)
T ss_pred hcCCccceeeeec--cCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhh
Confidence 9999987655544 69999999999999999999999999999999999999999999999999999999988888888
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC 429 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 429 (515)
.+.++..+|.+.++++|-.++.+.+......+ ......|.+-|.++.|.+-|+++++.+.|+.+..|...-|..
T Consensus 594 QIfSLg~cP~~dWlavGMens~vevlh~skp~------kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGas 667 (705)
T KOG0639|consen 594 QIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 667 (705)
T ss_pred hheecccCCCccceeeecccCcEEEEecCCcc------ceeecccccEEEEEEecccCceeeecCchhhhhhccCccccc
Confidence 89999999999999999999999988877643 122346778899999999999999999999999999988887
Q ss_pred eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 430 ~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
+...+ ..++|.++..|.|.+++++|+.|....||.+
T Consensus 668 iFqsk----E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 668 IFQSK----ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred eeecc----ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 76655 3445999999999999999999998888875
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-24 Score=205.29 Aligned_cols=350 Identities=16% Similarity=0.203 Sum_probs=261.7
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCC
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGS 234 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~ 234 (515)
.+||-.+.....+++||...|.++.+.+...... ...+++.|+.+.+|.-...-+.++.++.+|...+.|+.=.+ .
T Consensus 37 av~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a--~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~--~ 112 (764)
T KOG1063|consen 37 AVADPEKILIVTTLDGHVARVNCVHWLPTSEIVA--EMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARS--S 112 (764)
T ss_pred EEeCcccceeEEeccCCccceEEEEEcccccccc--eEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeee--e
Confidence 7899888777888999988888888876655222 34589999999999844456677888999887777764322 1
Q ss_pred EEEEEeCCCeEEEEECCCCe--------------------------------------------------eeeEecCCCC
Q psy6127 235 LLISCSDDDQIIIYDCEQGT--------------------------------------------------SKNTINSKKY 264 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~--------------------------------------------------~~~~~~~~~~ 264 (515)
...+...|+++.+||.+..+ ....+.+|.+
T Consensus 113 ~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~D 192 (764)
T KOG1063|consen 113 VMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTD 192 (764)
T ss_pred EEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccch
Confidence 22222578888888873322 2233578999
Q ss_pred ceeEEEEecCCC-eEEEEEeeCCCeEEEEECCCCe---------------------ee----------EEecCCCCCeEE
Q psy6127 265 GVDLIKFTHSKT-TAIHASTKVDATLRYLSLHDNK---------------------YV----------RYFPGHVRKVSS 312 (515)
Q Consensus 265 ~v~~~~~~~~~~-~l~~~s~~~d~~v~vwd~~~~~---------------------~~----------~~~~~h~~~v~~ 312 (515)
.|.+++|...+. .+++++++.|..|++|.+.-+. .. ..+.||.+.|.+
T Consensus 193 WIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~s 272 (764)
T KOG1063|consen 193 WIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYS 272 (764)
T ss_pred hhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEE
Confidence 999999997766 7888898999999999864322 01 113499999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCC--eEEEEec------CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCC
Q psy6127 313 LNLSPVDDSFISGSYDKTVRVWDLRQPN--NVGMIQL------SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGP 384 (515)
Q Consensus 313 l~~~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~------~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~ 384 (515)
+.|+|.+..|++++.|.++.+|...+.. .+..... ...-....|+|+++.+++-+..|-.++|. +.+...
T Consensus 273 v~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWk--t~d~~~ 350 (764)
T KOG1063|consen 273 VWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWK--TKDKTF 350 (764)
T ss_pred EEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEe--ccCccc
Confidence 9999999999999999999999876552 3333221 12356788999999999999999999998 222333
Q ss_pred ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-----------------------------------Cce
Q psy6127 385 FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-----------------------------------GNC 429 (515)
Q Consensus 385 ~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-----------------------------------~~~ 429 (515)
........+|...|+.++|+|.|.++++.+.|.+-|+|-.-. .+.
T Consensus 351 w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKV 430 (764)
T KOG1063|consen 351 WTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKV 430 (764)
T ss_pred eeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeeccccee
Confidence 344555678999999999999999999999998877764320 000
Q ss_pred eEEeec--------------------------------------------------------------------------
Q psy6127 430 VQSLSG-------------------------------------------------------------------------- 435 (515)
Q Consensus 430 ~~~~~~-------------------------------------------------------------------------- 435 (515)
++.+..
T Consensus 431 lRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq 510 (764)
T KOG1063|consen 431 LRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQ 510 (764)
T ss_pred eeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHH
Confidence 011100
Q ss_pred ----------cccCCCCCEEEEEecCCCEEEEEeCCC-----cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEE
Q psy6127 436 ----------VLNNNASPLEATFTPDSQFVASGSTDG-----QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500 (515)
Q Consensus 436 ----------~~~~~~~i~~~~~sp~g~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las 500 (515)
..+|...|.+++.+|+|+++|+++... .|++|+..+......+.+ |+-.|+.++||||+++|++
T Consensus 511 ~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~-HsLTVT~l~FSpdg~~LLs 589 (764)
T KOG1063|consen 511 QNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG-HSLTVTRLAFSPDGRYLLS 589 (764)
T ss_pred HhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc-cceEEEEEEECCCCcEEEE
Confidence 011222689999999999999987543 599999999998888988 9999999999999999999
Q ss_pred eeCC--EEEEcCC
Q psy6127 501 ACSN--MAFWIPT 511 (515)
Q Consensus 501 ~~~d--v~iW~~~ 511 (515)
.+.| ..+|...
T Consensus 590 vsRDRt~sl~~~~ 602 (764)
T KOG1063|consen 590 VSRDRTVSLYEVQ 602 (764)
T ss_pred eecCceEEeeeee
Confidence 9977 8888763
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-24 Score=214.53 Aligned_cols=273 Identities=16% Similarity=0.249 Sum_probs=221.4
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG-TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~ 296 (515)
.+|+..-+.++|.|+|.++.+++.||.|++|+.... +...++..+...|.+++.... +++++ +.+++|.+|.+.+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~--~f~~~--s~~~tv~~y~fps 85 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSN--HFLTG--SEQNTVLRYKFPS 85 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeeccc--ceEEe--eccceEEEeeCCC
Confidence 378999999999999999999999999999998765 555555556777777766543 45544 4899999999999
Q ss_pred CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEE
Q psy6127 297 NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLY 375 (515)
Q Consensus 297 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~ 375 (515)
++.-..+...+-++.+++|+.+|++++.||.|-.|++-++........+ .+..++.++.|+|++++||+.+.||.|++|
T Consensus 86 ~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw 165 (933)
T KOG1274|consen 86 GEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIW 165 (933)
T ss_pred CCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEE
Confidence 8877667667889999999999999999999999999999988777766 667789999999999999999999999999
Q ss_pred EeecCCCCCcee--eecCCCC-CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 376 DVRSYDKGPFAS--FKCPGER-GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 376 d~~~~~~~~~~~--~~~~~~~-~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
|+.++....... .+..... ...+..++|+|+|..+++.+.|+.|++|+..++.....+.....+.. +..+.|+|+|
T Consensus 166 ~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~-~~~~~wsPnG 244 (933)
T KOG1274|consen 166 DLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSK-FSDLQWSPNG 244 (933)
T ss_pred EcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccc-eEEEEEcCCC
Confidence 999754221111 1111111 45667899999988899999999999999999998888876544333 8999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEE
Q psy6127 453 QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las 500 (515)
+|||+++.||.|.|||+++-+. .. ....|.+++|.|+...+-.
T Consensus 245 ~YiAAs~~~g~I~vWnv~t~~~----~~-~~~~Vc~~aw~p~~n~it~ 287 (933)
T KOG1274|consen 245 KYIAASTLDGQILVWNVDTHER----HE-FKRAVCCEAWKPNANAITL 287 (933)
T ss_pred cEEeeeccCCcEEEEecccchh----cc-ccceeEEEecCCCCCeeEE
Confidence 9999999999999999998222 11 3467999999998765543
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-24 Score=188.68 Aligned_cols=290 Identities=20% Similarity=0.284 Sum_probs=225.1
Q ss_pred ccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCee----------e-----eEecCCCCceeEEEEecCCCeEEE
Q psy6127 217 FRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTS----------K-----NTINSKKYGVDLIKFTHSKTTAIH 280 (515)
Q Consensus 217 ~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~----------~-----~~~~~~~~~v~~~~~~~~~~~l~~ 280 (515)
.+.|.+.|+++...+ .|+|+++|+.||.|.+||+++... . ..-.+|...|..+.|-|-...+++
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 356889999999998 799999999999999999985431 1 112467889999999999888877
Q ss_pred EEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEE
Q psy6127 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD---DSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAY 356 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~ 356 (515)
.+ +.|.+++|||..+-+....|+ ..+.|.+-+++|-. -++++|..|-.|++-|+.+|.+...+. +.+.+.++.|
T Consensus 119 ss-SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~W 196 (397)
T KOG4283|consen 119 SS-SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEW 196 (397)
T ss_pred cc-cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEe
Confidence 66 799999999999998888876 56778888888854 378888889999999999999999884 5567999999
Q ss_pred CCCCCE-EEEEECCCcEEEEEeecCCC----------CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy6127 357 DPEGLA-FAIGVNSDSIKLYDVRSYDK----------GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF 425 (515)
Q Consensus 357 s~~~~~-l~~g~~dg~i~i~d~~~~~~----------~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~ 425 (515)
+|...+ |++|+.||.|++||++.... ......+....|.+.+.+++|+.++.++++++.|..+++|+..
T Consensus 197 sp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 197 SPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME 276 (397)
T ss_pred ccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecc
Confidence 998776 67899999999999986311 1111222345678899999999999999999999999999998
Q ss_pred CCceeEEeeccccCCC---CCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 426 NGNCVQSLSGVLNNNA---SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~---~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
+|+....-.+...+.. .-..+. +.+...++---.++.+.++++-.|..+..+.. |-..|.+.++-|+-+...+++
T Consensus 277 ~G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~-h~k~i~c~~~~~~fq~~~tg~ 354 (397)
T KOG4283|consen 277 SGRNTLREFGPIIHNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLST-HLKRINCAAYRPDFEQCFTGD 354 (397)
T ss_pred cCcccccccccccccccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeec-ccceeeEEeecCchhhhhccc
Confidence 8864322222111111 111122 23333444444668999999999999999998 888999999999988888887
Q ss_pred CC--EEEEcC
Q psy6127 503 SN--MAFWIP 510 (515)
Q Consensus 503 ~d--v~iW~~ 510 (515)
.+ +..|.+
T Consensus 355 ~d~ni~~w~p 364 (397)
T KOG4283|consen 355 MNGNIYMWSP 364 (397)
T ss_pred cCCccccccc
Confidence 55 667765
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-25 Score=205.20 Aligned_cols=247 Identities=15% Similarity=0.276 Sum_probs=199.1
Q ss_pred ccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCe----------eeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 219 ENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQGT----------SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 219 ~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
.|.+.|+.+.+.|.. ..+|+++..+.|.|||..+.. +-.++.+|...-..++|++.....++++ +.|+
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~-~~d~ 200 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG-SDDH 200 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec-cCCC
Confidence 589999999999954 677888889999999986421 1236789988888899999877665554 5899
Q ss_pred eEEEEECCCCe-------eeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCC--CCeEEEE-ecCCCeeEEEE
Q psy6127 288 TLRYLSLHDNK-------YVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQ--PNNVGMI-QLSGNKPIAAY 356 (515)
Q Consensus 288 ~v~vwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~--~~~~~~~-~~~~~~~~~~~ 356 (515)
+|++||+.... +...+.+|.+.|..++|++-.. .|++++.|+.+.|||+|+ .++.... .+...+.+++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 99999986543 3467889999999999999654 889999999999999995 3333333 45677999999
Q ss_pred CC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCc------
Q psy6127 357 DP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGN------ 428 (515)
Q Consensus 357 s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~------ 428 (515)
+| ++..||+|+.|++|.+||+|+... .+.....|...|..+.|+|.. ..|++++.|+.+.+||+..-.
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~----~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~e 356 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNK----PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPE 356 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhccc----CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChh
Confidence 99 566788999999999999999764 555667899999999999965 577888899999999986421
Q ss_pred -----eeEEeeccccCCCCCEEEEEecCCC-EEEEEeCCCcEEEEECC
Q psy6127 429 -----CVQSLSGVLNNNASPLEATFTPDSQ-FVASGSTDGQVHIWNAE 470 (515)
Q Consensus 429 -----~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs~dg~I~iwd~~ 470 (515)
+...+..|.+|...|..+.|+|+.. .+++.++|+.+.||.+.
T Consensus 357 da~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 357 DAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred hhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 2233455777888899999999876 56678899999999975
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-24 Score=199.53 Aligned_cols=333 Identities=17% Similarity=0.230 Sum_probs=252.0
Q ss_pred CCcchhhccc---cccccCCc-eeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEc
Q psy6127 155 GSWDFELLHS---LSSLESPH-FVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYS 230 (515)
Q Consensus 155 ~~wd~~~~~~---l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~s 230 (515)
..|+.+.+-. ...++.+. ..|+++.|.++.... +++.++.+.+|+ ....+..+....|.+.|.+++.-
T Consensus 225 ~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdvi------TgDS~G~i~Iw~--~~~~~~~k~~~aH~ggv~~L~~l 296 (626)
T KOG2106|consen 225 YFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVI------TGDSGGNILIWS--KGTNRISKQVHAHDGGVFSLCML 296 (626)
T ss_pred EEEEccCCceEEEeeccccccceEEEEEEEcCCCCEE------eecCCceEEEEe--CCCceEEeEeeecCCceEEEEEe
Confidence 7788777644 34566663 358999998887544 899999999999 56666666666999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR 308 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~ 308 (515)
.+|.+| +|+.|..|..|| ..-+.++. ++...+++..++=...+ +++++ ..+.|.-=.++++-.+ ...+|.+
T Consensus 297 r~Gtll-SGgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~d--i~vGT--trN~iL~Gt~~~~f~~-~v~gh~d 369 (626)
T KOG2106|consen 297 RDGTLL-SGGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGD--ILVGT--TRNFILQGTLENGFTL-TVQGHGD 369 (626)
T ss_pred cCccEe-ecCccceEEecc-ccccccccccCchhcCCeeEEecCCCc--EEEee--ccceEEEeeecCCceE-EEEeccc
Confidence 999655 599999999999 43344333 33444677776544333 56555 3555555555554433 4457999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceee
Q psy6127 309 KVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~ 388 (515)
..+.++.+|+.+.+++++.|+.+++|+ ..+.+.......+..++.|+|.| .++.|+..|...+.|.++.. .+
T Consensus 370 elwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~-----lv 441 (626)
T KOG2106|consen 370 ELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQD-----LV 441 (626)
T ss_pred ceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccce-----eE
Confidence 999999999999999999999999999 66677777777889999999999 99999999999999998843 23
Q ss_pred ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc-eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 389 KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN-CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 389 ~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
..... +.+++.++|+|+|.+||+|+.|+.|++|.+.... .......+.. .+|+.+.|++|++++.+-+.|-.|-.|
T Consensus 442 ~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~g--s~ithLDwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 442 TIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSG--SPITHLDWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred EEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecC--ceeEEeeecCCCceEEeccCceEEEEE
Confidence 32233 7789999999999999999999999999987544 3444433333 779999999999999999999999999
Q ss_pred ECCCCe--------------EE---EEEcCCCCCCeEEEEECCCCCEEEEeeC--CEEEEcCCCC
Q psy6127 468 NAERGY--------------KV---CVLDGDHPSAVQSLQFNPKYHMLASACS--NMAFWIPTLS 513 (515)
Q Consensus 468 d~~~~~--------------~~---~~~~~~h~~~V~~l~~sp~~~~las~~~--dv~iW~~~~~ 513 (515)
....-+ +. ..+-+.+...|+.++-+...+++|+|+. .++++.++..
T Consensus 519 ~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~ 583 (626)
T KOG2106|consen 519 KPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCS 583 (626)
T ss_pred ccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccC
Confidence 543211 11 1112346667888888888999999984 4888887643
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-24 Score=191.81 Aligned_cols=279 Identities=15% Similarity=0.279 Sum_probs=214.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe
Q psy6127 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF 303 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~ 303 (515)
-.|+.|++.|.+||+|+.||.|.|||+.+...-+.+.+|..+|.+++|+++|..+++++ .|..+.+||+..|.+++.+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS--~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSS--RDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeec--CCceeEEEeccCCCceeEE
Confidence 68999999999999999999999999999998899999999999999999999998876 7999999999999998888
Q ss_pred cCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEec------CCCeeEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 304 PGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQL------SGNKPIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
. ..++|+.+.|+|... ..++.-.+..-.+-++..+.. ..+.. .....+..|++.|+++++|...|.+.+||
T Consensus 104 r-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~ 181 (405)
T KOG1273|consen 104 R-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYD 181 (405)
T ss_pred E-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCce-eeccCCCccccccccccccccCCCCEEEEecCcceEEEEe
Confidence 6 678999999999654 333333344445555544221 11111 11223356899999999999999999999
Q ss_pred eecCCCCCceeeecCCCC-CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-------c--eeEEeeccccCCCCCEEE
Q psy6127 377 VRSYDKGPFASFKCPGER-GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-------N--CVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~-~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~-------~--~~~~~~~~~~~~~~i~~~ 446 (515)
..+.+ ......-. ...|..+.++..|+.++.-+.|..|+.|+++.- . +.+.++...+ ...-.++
T Consensus 182 a~t~e-----~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVN-k~~Wk~c 255 (405)
T KOG1273|consen 182 AETLE-----CVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVN-KLQWKKC 255 (405)
T ss_pred cchhe-----eeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHh-hhhhhhe
Confidence 99864 22221112 367889999999999999999999999997631 1 1111111111 1124678
Q ss_pred EEecCCCEEEEEeC-CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEe-eCCEEEEcCCC
Q psy6127 447 TFTPDSQFVASGST-DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA-CSNMAFWIPTL 512 (515)
Q Consensus 447 ~~sp~g~~l~sgs~-dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~-~~dv~iW~~~~ 512 (515)
+|+.+|.|+++|+. -..++||.-..|.+++.+.|.-.....++.|+|-...+++- +|.++||....
T Consensus 256 cfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 256 CFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIASGVVYIWAVVQ 323 (405)
T ss_pred eecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeeccCCceEEEEeec
Confidence 99999999988874 46799999999999999988433667899999988888875 46799997643
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=204.42 Aligned_cols=277 Identities=14% Similarity=0.196 Sum_probs=226.8
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eeeeEec--CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG---TSKNTIN--SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
.|..-|.++.+|...++++||+. |.|+|||+... .++..+. ....-+.++...|||..+++++ +-.++.|||
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGG--eastlsiWD 493 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGG--EASTLSIWD 493 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecc--ccceeeeee
Confidence 47888889999999999999986 77999999743 2233332 2356789999999999988765 688999999
Q ss_pred CCCCeee--EEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCC
Q psy6127 294 LHDNKYV--RYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 294 ~~~~~~~--~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg 370 (515)
+....+. ..+....-...+++.+||.+..++++.||.|.|||+.+...++.++ +...+.|+.++++|..|-+|+-|.
T Consensus 494 LAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDn 573 (705)
T KOG0639|consen 494 LAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDN 573 (705)
T ss_pred ccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCcc
Confidence 9766543 3333333567789999999999999999999999999999999884 456689999999999999999999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
++|.||++.+.+... ....+.|.++..+|++.++++|-+++.+.+......+. ..+.. +.+.|.++.|.+
T Consensus 574 tvRcWDlregrqlqq------hdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~k-yqlhl---heScVLSlKFa~ 643 (705)
T KOG0639|consen 574 TVRCWDLREGRQLQQ------HDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEK-YQLHL---HESCVLSLKFAY 643 (705)
T ss_pred ceeehhhhhhhhhhh------hhhhhhheecccCCCccceeeecccCcEEEEecCCccc-eeecc---cccEEEEEEecc
Confidence 999999998653211 23456788999999999999999999998887654432 33333 344499999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
.|+++++.+.|+.+..|...-|..+...+ ...+|.++..+.|.+++++|+|+ -.||.+
T Consensus 644 cGkwfvStGkDnlLnawrtPyGasiFqsk--E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 644 CGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred cCceeeecCchhhhhhccCccccceeecc--ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 99999999999999999999999888776 57899999999999999999987 667654
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=201.87 Aligned_cols=287 Identities=15% Similarity=0.170 Sum_probs=219.9
Q ss_pred CCCCcEEEEccceeeeeEeeeecccc-CCcEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeeeeEecCCCCceeEEEEe
Q psy6127 195 RSSRTITKCSENLVRSYRVAKVFREN-TDKINSLDYSSDGSLLISCSD-DDQIIIYDCEQGTSKNTINSKKYGVDLIKFT 272 (515)
Q Consensus 195 ~~~~~~i~~wd~~~~~~~~~~~~~~h-~~~I~~l~~spd~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 272 (515)
+.+...+.+|| .+++....++++- ...-.++..- .+.+++++.. -..+.+|.+...........-.+++.+++-+
T Consensus 14 S~d~~~~~~~d--l~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~ 90 (476)
T KOG0646|consen 14 SFDPINCIVWD--LRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASS 90 (476)
T ss_pred CCCCcceeEEe--cCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecC
Confidence 33444489999 8888887777765 2222222111 3357776654 4679999987665555344456789999999
Q ss_pred cCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC---------CCCeEE
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR---------QPNNVG 343 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~---------~~~~~~ 343 (515)
|.|.+++.++ ..+.+++|.+.+|..+..+.+|-..|+++.|+.||.+|++||.||.|.+|++- +.++..
T Consensus 91 n~G~~l~ag~--i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~ 168 (476)
T KOG0646|consen 91 NLGYFLLAGT--ISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLH 168 (476)
T ss_pred CCceEEEeec--ccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcccee
Confidence 9998776553 69999999999999999999999999999999999999999999999999863 234445
Q ss_pred EEe-cCCCeeEEEECCC--CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEE
Q psy6127 344 MIQ-LSGNKPIAAYDPE--GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIR 420 (515)
Q Consensus 344 ~~~-~~~~~~~~~~s~~--~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~ 420 (515)
.+. |.-+++.+...+. ..++++++.|.++++||+..+.. ... -.....+.+++.+|-+..+++|+++|.|.
T Consensus 169 ~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~L--Llt----i~fp~si~av~lDpae~~~yiGt~~G~I~ 242 (476)
T KOG0646|consen 169 IFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVL--LLT----ITFPSSIKAVALDPAERVVYIGTEEGKIF 242 (476)
T ss_pred eeccCcceeEEEEecCCCccceEEEecCCceEEEEEecccee--eEE----EecCCcceeEEEcccccEEEecCCcceEE
Confidence 553 3345666665554 56899999999999999998641 111 23345788999999999999999999999
Q ss_pred EEECCCCc----------------eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCC
Q psy6127 421 LFDAFNGN----------------CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPS 484 (515)
Q Consensus 421 iwd~~~~~----------------~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 484 (515)
+.++.... .+..+.+|.+. ..|+|++.+-||..|++|+.||.|+|||+.+.++++++.. ..+
T Consensus 243 ~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~-~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~-~kg 320 (476)
T KOG0646|consen 243 QNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENE-SAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT-SKG 320 (476)
T ss_pred eeehhcCCcccccccccccccccceeeeeccccCC-cceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhh-hcc
Confidence 88865322 33445555442 3699999999999999999999999999999999999885 678
Q ss_pred CeEEEEECCC
Q psy6127 485 AVQSLQFNPK 494 (515)
Q Consensus 485 ~V~~l~~sp~ 494 (515)
+|+.+.+.|-
T Consensus 321 pVtnL~i~~~ 330 (476)
T KOG0646|consen 321 PVTNLQINPL 330 (476)
T ss_pred ccceeEeecc
Confidence 9999999773
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-24 Score=197.11 Aligned_cols=301 Identities=20% Similarity=0.301 Sum_probs=230.0
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCC--CEEEEEeCCCeEEEEECCCC----eeeeEecCCCCceeEEEEecCCCeEEEE
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDG--SLLISCSDDDQIIIYDCEQG----TSKNTINSKKYGVDLIKFTHSKTTAIHA 281 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~--~~lasgs~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 281 (515)
+.......+.+-|.++|++++|+|.. +++|+|..-|+|-+||+.+. ..+..+..|..+|.++.|+|.....++.
T Consensus 173 l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~s 252 (498)
T KOG4328|consen 173 LDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYS 252 (498)
T ss_pred cccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheee
Confidence 44455667778899999999999943 68899999999999999532 3356678899999999999988776666
Q ss_pred EeeCCCeEEEEECCCCeeeEEec--CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-EEE-ecCCCeeEEEEC
Q psy6127 282 STKVDATLRYLSLHDNKYVRYFP--GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-GMI-QLSGNKPIAAYD 357 (515)
Q Consensus 282 s~~~d~~v~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~-~~~~~~~~~~~s 357 (515)
+ +.||+|++-|++.+.....+. .....+.++.|+.+...++.+..=|...+||++++... ..+ -+...+..++++
T Consensus 253 s-SyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~N 331 (498)
T KOG4328|consen 253 S-SYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALN 331 (498)
T ss_pred e-ccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecC
Confidence 6 589999999998875443333 35567788999998888888888889999999987653 222 344579999999
Q ss_pred CC-CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC----CCceeEE
Q psy6127 358 PE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF----NGNCVQS 432 (515)
Q Consensus 358 ~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~----~~~~~~~ 432 (515)
|. ..++++++.|++.+|||++....... .+.....|...|.+..|||.+-.|++.+.|..|+|||.. .-.+...
T Consensus 332 P~~p~~laT~s~D~T~kIWD~R~l~~K~s-p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~ 410 (498)
T KOG4328|consen 332 PVCPWFLATASLDQTAKIWDLRQLRGKAS-PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGT 410 (498)
T ss_pred CCCchheeecccCcceeeeehhhhcCCCC-cceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccce
Confidence 95 45689999999999999998654432 133345788899999999988889999999999999983 2233333
Q ss_pred eeccccCC---CCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEE-EECCCCCEEEEeeCC-EEE
Q psy6127 433 LSGVLNNN---ASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL-QFNPKYHMLASACSN-MAF 507 (515)
Q Consensus 433 ~~~~~~~~---~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l-~~sp~~~~las~~~d-v~i 507 (515)
+. |.... -......|.|+..++++|..-..|-|+|-..++.+..+.......|.++ .|+|-+..+++|++. ++|
T Consensus 411 I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki 489 (498)
T KOG4328|consen 411 IP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKI 489 (498)
T ss_pred ee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceE
Confidence 33 22111 1246678999999999999999999999999998888765344456654 899988867776643 555
Q ss_pred EcCC
Q psy6127 508 WIPT 511 (515)
Q Consensus 508 W~~~ 511 (515)
|-+.
T Consensus 490 ~vft 493 (498)
T KOG4328|consen 490 YVFT 493 (498)
T ss_pred EEEe
Confidence 5443
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=186.13 Aligned_cols=248 Identities=17% Similarity=0.259 Sum_probs=196.4
Q ss_pred cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC---eeeEEecCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEE
Q psy6127 260 NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN---KYVRYFPGHVRKVSSLNLSP--VDDSFISGSYDKTVRVW 334 (515)
Q Consensus 260 ~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~---~~~~~~~~h~~~v~~l~~~~--~~~~l~s~s~dg~i~iw 334 (515)
..|+..|..+...-.|+++++++ .|++|+|+.++.+ +.+.++.||.++|+.++|.. -|..|++++.||.|.||
T Consensus 8 t~H~D~IHda~lDyygkrlATcs--SD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiW 85 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCS--SDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIW 85 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeec--CCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEE
Confidence 45777888888888888888776 6999999998765 46788999999999999976 68899999999999999
Q ss_pred EcCCCCeEEEE---ecCCCeeEEEECCC--CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC---
Q psy6127 335 DLRQPNNVGMI---QLSGNKPIAAYDPE--GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD--- 406 (515)
Q Consensus 335 d~~~~~~~~~~---~~~~~~~~~~~s~~--~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~--- 406 (515)
.-.+++..+.. .+...+++++|.|. |-.|++++.||.|.+.+.+... .....+....|.-.+++++|.|.
T Consensus 86 ke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g--~w~t~ki~~aH~~GvnsVswapa~~~ 163 (299)
T KOG1332|consen 86 KEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSG--GWTTSKIVFAHEIGVNSVSWAPASAP 163 (299)
T ss_pred ecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCC--CccchhhhhccccccceeeecCcCCC
Confidence 98888544433 45567999999985 5689999999999999998751 11233345678888999999996
Q ss_pred C-----------CEEEEEECCCcEEEEECCCCce--eEEeeccccCCCCCEEEEEecCC----CEEEEEeCCCcEEEEEC
Q psy6127 407 G-----------KLILVSTNGSIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDS----QFVASGSTDGQVHIWNA 469 (515)
Q Consensus 407 ~-----------~~l~~~s~dg~i~iwd~~~~~~--~~~~~~~~~~~~~i~~~~~sp~g----~~l~sgs~dg~I~iwd~ 469 (515)
| +.|++|+.|+.|+||+..+++- .+.+.+|. ..++.++|.|.- .++|+++.||+|.||..
T Consensus 164 g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~---dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~ 240 (299)
T KOG1332|consen 164 GSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHK---DWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTK 240 (299)
T ss_pred ccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcc---hhhhhhhhccccCCCceeeEEecCCCcEEEEEe
Confidence 4 5699999999999999887632 33455544 459999999964 58999999999999976
Q ss_pred CC--CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCCC
Q psy6127 470 ER--GYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 470 ~~--~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~ 514 (515)
.. +.-..++.......++.+.||+.|++|+.+++| +++|..+..+
T Consensus 241 ~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~G 289 (299)
T KOG1332|consen 241 DEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDG 289 (299)
T ss_pred cCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCCC
Confidence 52 122222322256789999999999999998876 9999877654
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-23 Score=184.45 Aligned_cols=272 Identities=17% Similarity=0.286 Sum_probs=204.2
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ----GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
.+|.+-|+++.|.+.|+.+|+|+.|++++|||..+ ..+....+.|.+.|..+.|.+..-.-++++++.|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 48999999999999999999999999999999653 34566788999999999999876556667778999999998
Q ss_pred CCCC---------eeeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCCeEEE------Ee--------cC
Q psy6127 294 LHDN---------KYVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVRVWDLRQPNNVGM------IQ--------LS 348 (515)
Q Consensus 294 ~~~~---------~~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~------~~--------~~ 348 (515)
-... ....++....+.|+++.|.|. |-.+++++.||.+|||+.-..-.+.. ++ ..
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 5211 123456677889999999996 55899999999999998765433222 22 33
Q ss_pred CCeeEEEECCC---CCEEEEEECC-----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC----CCEEEEEECC
Q psy6127 349 GNKPIAAYDPE---GLAFAIGVNS-----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD----GKLILVSTNG 416 (515)
Q Consensus 349 ~~~~~~~~s~~---~~~l~~g~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~----~~~l~~~s~d 416 (515)
....|+.|+|. ..+|++|+.+ +.+.||........ .........+..+|+.++|.|+ ...||+++.|
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rK-w~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kD 248 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRK-WLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKD 248 (361)
T ss_pred CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcce-eeeehhcCCCCCcceeeeeccccCCceeeEEEeecC
Confidence 34567888873 4678888765 57899987764322 2233334588999999999995 3478999999
Q ss_pred CcEEEEECCCC-----------------ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC---CCeEEE
Q psy6127 417 SIIRLFDAFNG-----------------NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE---RGYKVC 476 (515)
Q Consensus 417 g~i~iwd~~~~-----------------~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~---~~~~~~ 476 (515)
| |+||.+... -.+..+..+.+|...+..+.|+-.|..|++.+.||.||+|... ..++..
T Consensus 249 g-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~s 327 (361)
T KOG2445|consen 249 G-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTS 327 (361)
T ss_pred c-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeee
Confidence 9 999998731 1234444566777789999999999999999999999999753 335666
Q ss_pred EEcCCCCCCeEEEEECC
Q psy6127 477 VLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 477 ~~~~~h~~~V~~l~~sp 493 (515)
.+.. .+.++...|++
T Consensus 328 v~~~--e~~~~~~~~~~ 342 (361)
T KOG2445|consen 328 VLKA--EGSVTKPDFSQ 342 (361)
T ss_pred EEec--cCCCCCccccc
Confidence 6653 33444444443
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-23 Score=201.61 Aligned_cols=285 Identities=18% Similarity=0.241 Sum_probs=221.4
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
.|...++||++.|.|++..|.|.+||+|+.||+|+||.+.+|.+++++... +.|.|++|+|.++.-+++.+ ....+.+
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~~~~~vLAvA-~~~~~~i 468 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPLSDLCVLAVA-VGECVLI 468 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCCCCceeEEEE-ecCceEE
Confidence 445678999999999999999999999999999999999999999988754 57999999998876555543 2223333
Q ss_pred EECCCC-------------------------------------eeeEEecCCCCCeEEEEEcCCCCEEEEEeCC---CcE
Q psy6127 292 LSLHDN-------------------------------------KYVRYFPGHVRKVSSLNLSPVDDSFISGSYD---KTV 331 (515)
Q Consensus 292 wd~~~~-------------------------------------~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d---g~i 331 (515)
.+..-| .-++....|...|..+.|+..|.+|++...+ ..|
T Consensus 469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~V 548 (733)
T KOG0650|consen 469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSV 548 (733)
T ss_pred eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceE
Confidence 332111 0122334588899999999999999988664 468
Q ss_pred EEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEE
Q psy6127 332 RVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI 410 (515)
Q Consensus 332 ~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l 410 (515)
.|.++.......-+ ...+.+..+.|+|...+|++++ ...|++||+.... ..+........|..++.+|.|..|
T Consensus 549 liHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqe-----lvKkL~tg~kwiS~msihp~GDnl 622 (733)
T KOG0650|consen 549 LIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQE-----LVKKLLTGSKWISSMSIHPNGDNL 622 (733)
T ss_pred EEEecccccccCchhhcCCceeEEEecCCCceEEEEe-ccceEEEehhHHH-----HHHHHhcCCeeeeeeeecCCCCeE
Confidence 89999877666555 4456688999999999988875 5689999998733 223333445578899999999999
Q ss_pred EEEECCCcEEEEECCCC-ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC------CC---eEEEEEcC
Q psy6127 411 LVSTNGSIIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE------RG---YKVCVLDG 480 (515)
Q Consensus 411 ~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~------~~---~~~~~~~~ 480 (515)
+.|+.|+.+..+|+.-. ++.+++..|. ..+++++|++.-.++++|+.||++.|+.-. .. -++..+.+
T Consensus 623 i~gs~d~k~~WfDldlsskPyk~lr~H~---~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~g 699 (733)
T KOG0650|consen 623 ILGSYDKKMCWFDLDLSSKPYKTLRLHE---KAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRG 699 (733)
T ss_pred EEecCCCeeEEEEcccCcchhHHhhhhh---hhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccC
Confidence 99999999999999755 4455555544 448999999999999999999999988521 11 35566777
Q ss_pred CCCCC----eEEEEECCCCCEEEEeeCC--EEEE
Q psy6127 481 DHPSA----VQSLQFNPKYHMLASACSN--MAFW 508 (515)
Q Consensus 481 ~h~~~----V~~l~~sp~~~~las~~~d--v~iW 508 (515)
|... |.++.|+|...+|.+++++ +++|
T Consensus 700 -H~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 700 -HEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred -ceeecccceEeecccCCCceEEecCCCceEEee
Confidence 7654 8899999999999998865 8888
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-22 Score=194.36 Aligned_cols=353 Identities=16% Similarity=0.133 Sum_probs=253.6
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccc-cccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHS-LSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRS 210 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~ 210 (515)
+-||.+..+|.| .+|+...+-. ...+.+|.. .+-++.+.+.. =.||.+.++.+.-|| +.+
T Consensus 38 ~~lAvsRt~g~I----------EiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~------RLFS~g~sg~i~EwD--l~~ 99 (691)
T KOG2048|consen 38 NQLAVSRTDGNI----------EIWNLSNNWFLEPVIHGPEDRSIESLAWAEGG------RLFSSGLSGSITEWD--LHT 99 (691)
T ss_pred CceeeeccCCcE----------EEEccCCCceeeEEEecCCCCceeeEEEccCC------eEEeecCCceEEEEe--ccc
Confidence 459999999999 9999988643 335667644 35555555333 225888999999999 999
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeee--EecCCCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN--TINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
.+....+....+.|++++.+|.++.++.|++||.+..++...++... .+...++.+.+++|+|++..++.++ .||.
T Consensus 100 lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs--~Dg~ 177 (691)
T KOG2048|consen 100 LKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGS--IDGV 177 (691)
T ss_pred CceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecc--cCce
Confidence 99999999999999999999999999999999988888887776543 3455678999999999998777655 7999
Q ss_pred EEEEECCCCeeeEEe-------c-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCC
Q psy6127 289 LRYLSLHDNKYVRYF-------P-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPE 359 (515)
Q Consensus 289 v~vwd~~~~~~~~~~-------~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~ 359 (515)
|++||..++..+... . +...-|+++.|-. ...|++|..-|+|++||...+..++.+ .+...+.+++.+++
T Consensus 178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~ 256 (691)
T KOG2048|consen 178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADN 256 (691)
T ss_pred EEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCC
Confidence 999999998876621 1 1334578888885 456999999999999999999888776 44556888999998
Q ss_pred CCEEEEEECCCcEEEEEeecCCC---------------------------------------------------------
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDK--------------------------------------------------------- 382 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~--------------------------------------------------------- 382 (515)
++.+++++.|+.+.-|...+...
T Consensus 257 ~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~ 336 (691)
T KOG2048|consen 257 EDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSREFKNMDHRQKNLFPASD 336 (691)
T ss_pred CCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccccCchhhhccccccccc
Confidence 88888888888776665432100
Q ss_pred ---------------------------------CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC---
Q psy6127 383 ---------------------------------GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN--- 426 (515)
Q Consensus 383 ---------------------------------~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~--- 426 (515)
.....++........|.+.+.||+|++++.++-. ..++|.+..
T Consensus 337 ~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~-~~~iy~L~~~~~ 415 (691)
T KOG2048|consen 337 RVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAISTVS-RTKIYRLQPDPN 415 (691)
T ss_pred eeecCccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEeecc-ceEEEEeccCcc
Confidence 0000000111122357788999999999987621 233333221
Q ss_pred ---------------------------------------------C--ceeEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 427 ---------------------------------------------G--NCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 427 ---------------------------------------------~--~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
. +.+..+. .......|..+..+|+|+++|+.+
T Consensus 416 vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~-~~~~~~~I~~l~~SsdG~yiaa~~ 494 (691)
T KOG2048|consen 416 VKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQ-SQAKCPSISRLVVSSDGNYIAAIS 494 (691)
T ss_pred eeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccc-cccCCCcceeEEEcCCCCEEEEEe
Confidence 0 0000000 011234688999999999999999
Q ss_pred CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC-CCCEEEEeeCCEEEEc
Q psy6127 460 TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP-KYHMLASACSNMAFWI 509 (515)
Q Consensus 460 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~las~~~dv~iW~ 509 (515)
.+|.|.+|++++++....... -...|++++|+| +...++.+..+-.++.
T Consensus 495 t~g~I~v~nl~~~~~~~l~~r-ln~~vTa~~~~~~~~~~lvvats~nQv~e 544 (691)
T KOG2048|consen 495 TRGQIFVYNLETLESHLLKVR-LNIDVTAAAFSPFVRNRLVVATSNNQVFE 544 (691)
T ss_pred ccceEEEEEcccceeecchhc-cCcceeeeeccccccCcEEEEecCCeEEE
Confidence 999999999998876555533 457899999996 4455555554434433
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-24 Score=203.65 Aligned_cols=283 Identities=21% Similarity=0.278 Sum_probs=205.9
Q ss_pred EEEEcC---CCCEEEEEeCCCeEEEEECCCCee------eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC
Q psy6127 226 SLDYSS---DGSLLISCSDDDQIIIYDCEQGTS------KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 226 ~l~~sp---d~~~lasgs~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~ 296 (515)
+..|++ ....||.+.+||.|.++|...... ......|.+.|..+.|.|....++.++ .|.++++||+++
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsas--GDsT~r~Wdvk~ 131 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSAS--GDSTIRPWDVKT 131 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEcc--CCceeeeeeecc
Confidence 356665 346899999999999999875432 255678999999999999555566665 499999999999
Q ss_pred CeeeEE--ecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCe--------------------EEEE--------
Q psy6127 297 NKYVRY--FPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNN--------------------VGMI-------- 345 (515)
Q Consensus 297 ~~~~~~--~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~--------------------~~~~-------- 345 (515)
++++.. +.||...|.+++|.|.++ .|++|+.||.|.|||++-... ....
T Consensus 132 s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~k 211 (720)
T KOG0321|consen 132 SRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWK 211 (720)
T ss_pred ceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccc
Confidence 998876 899999999999999876 789999999999999964320 0000
Q ss_pred ecCCCeeE---EEECCCCCEEEEEEC-CCcEEEEEeecCCC----CCceeeec--CCCCCcCeEEEEEcCCCCEEEEEEC
Q psy6127 346 QLSGNKPI---AAYDPEGLAFAIGVN-SDSIKLYDVRSYDK----GPFASFKC--PGERGCEWTGLKFSPDGKLILVSTN 415 (515)
Q Consensus 346 ~~~~~~~~---~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~----~~~~~~~~--~~~~~~~i~~l~~sp~~~~l~~~s~ 415 (515)
.....+.. +.+..|...||+++. |+.|++||++.... .+...... .......+.++.....|.++++.+.
T Consensus 212 A~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt 291 (720)
T KOG0321|consen 212 AASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT 291 (720)
T ss_pred cccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEec
Confidence 01112222 455568888888877 99999999997532 11111111 1122345678888888999999999
Q ss_pred CCcEEEEECCCCc--eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 416 GSIIRLFDAFNGN--CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 416 dg~i~iwd~~~~~--~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
|+.|++|++.... ++..+.++..... -..-..+||+.++++|+.|...++|.+.+.+.-..+..+|.-.|++++|.|
T Consensus 292 D~sIy~ynm~s~s~sP~~~~sg~~~~sf-~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~p 370 (720)
T KOG0321|consen 292 DNSIYFYNMRSLSISPVAEFSGKLNSSF-YVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLP 370 (720)
T ss_pred CCcEEEEeccccCcCchhhccCccccee-eeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecc
Confidence 9999999987643 3334444333222 223457899999999999999999999887654433334999999999998
Q ss_pred --CCCEEEEeeCC--EEEEcCCC
Q psy6127 494 --KYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 494 --~~~~las~~~d--v~iW~~~~ 512 (515)
... +++++.| ++||++..
T Consensus 371 S~~t~-v~TcSdD~~~kiW~l~~ 392 (720)
T KOG0321|consen 371 SATTP-VATCSDDFRVKIWRLSN 392 (720)
T ss_pred ccCCC-ceeeccCcceEEEeccC
Confidence 444 4455665 99999854
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=209.06 Aligned_cols=248 Identities=18% Similarity=0.281 Sum_probs=207.8
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecC-CCeEEEEEeeCCCeEEEEECCCC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS-KTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
+....|.+++.+|+|++||+|..-|+++||++.+-+....+..|+..|.|+.|+.. -..-++++++.|.-|.|+|+...
T Consensus 457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn 536 (1080)
T KOG1408|consen 457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN 536 (1080)
T ss_pred CcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc
Confidence 45678999999999999999999999999999999999999999999999999853 33345566679999999998654
Q ss_pred -eeeEEecCCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEEcCCCCeEEEE------ecCCCeeEEEECCCCCEEEEEEC
Q psy6127 298 -KYVRYFPGHVRKVSSLNLSPVD--DSFISGSYDKTVRVWDLRQPNNVGMI------QLSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 298 -~~~~~~~~h~~~v~~l~~~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~------~~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
..+.++.+|...|+++.|...| ..+++++.|..|.+--.+.......+ ..+.....+++.|..+++++++.
T Consensus 537 y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ 616 (1080)
T KOG1408|consen 537 YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ 616 (1080)
T ss_pred cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec
Confidence 5678899999999999998877 58999999998865443322222222 11234678999999999999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
|..|+|||+.+++. .+.++....+.+....+...|.|.|+++.+.|+++.++|..+|+++....+|... |+.+.|
T Consensus 617 Drnirif~i~sgKq--~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~---VTG~kF 691 (1080)
T KOG1408|consen 617 DRNIRIFDIESGKQ--VKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEA---VTGVKF 691 (1080)
T ss_pred ccceEEEeccccce--eeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchh---eeeeee
Confidence 99999999998653 3455555667677779999999999999999999999999999999999886654 999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCC
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
.+|-+.|++.+.||.|.||.+..
T Consensus 692 ~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 692 LNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred cccchhheeecCCceEEEEECch
Confidence 99999999999999999999864
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-22 Score=195.78 Aligned_cols=282 Identities=15% Similarity=0.177 Sum_probs=226.3
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-eeeEecCC-CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-SKNTINSK-KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
-..+|+++||+.+.+.||.+-.||.|.+|++..+- +...+.++ ...|.+++|++. .+++.++ .+|.|.-||+.++
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~-~RLFS~g--~sg~i~EwDl~~l 100 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEG-GRLFSSG--LSGSITEWDLHTL 100 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccC-CeEEeec--CCceEEEEecccC
Confidence 35789999999999999999999999999998753 33445555 467999999954 4566554 6999999999999
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE---ecCCCeeEEEECCCCCEEEEEECCCcEEE
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI---QLSGNKPIAAYDPEGLAFAIGVNSDSIKL 374 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~i~i 374 (515)
++...+....+.|++++.+|.+..++.|+.||.+..++...++..... ...+.+-+++|+|++..++.|+.||.|++
T Consensus 101 k~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iri 180 (691)
T KOG2048|consen 101 KQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRI 180 (691)
T ss_pred ceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEE
Confidence 999999999999999999999999999999998888888877665443 23366889999999999999999999999
Q ss_pred EEeecCCCCCceeeecC---CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 375 YDVRSYDKGPFASFKCP---GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~---~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
||...+........... .....-|.++.|-.++ .|++|..-|+|.+||...+..++.+..|..+ |.+++..++
T Consensus 181 wd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~ad---Vl~Lav~~~ 256 (691)
T KOG2048|consen 181 WDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDAD---VLALAVADN 256 (691)
T ss_pred EEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhhhhcc---eeEEEEcCC
Confidence 99998763321122221 2234456777777554 7889999999999999999998888776655 999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeE---EEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcC
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYK---VCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIP 510 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~ 510 (515)
+.++++++.|+.|.-|...+++. ....+..|...|.+++..++ .+.+|+.|..+.-.
T Consensus 257 ~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~ 316 (691)
T KOG2048|consen 257 EDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAIC 316 (691)
T ss_pred CCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEc
Confidence 99999999999999998877643 22222348889999999987 78888877555433
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-23 Score=183.39 Aligned_cols=281 Identities=20% Similarity=0.336 Sum_probs=210.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe------------eeeEec-CCCCceeEEEEec-----CCCeEEEEEe
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT------------SKNTIN-SKKYGVDLIKFTH-----SKTTAIHAST 283 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~------------~~~~~~-~~~~~v~~~~~~~-----~~~~l~~~s~ 283 (515)
+-...+.|+|||..+++-+.|..+++|++...- ....++ .....|...+|-+ +...-+.++.
T Consensus 50 nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s 129 (406)
T KOG2919|consen 50 NFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS 129 (406)
T ss_pred hhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence 345567899999999999999999999985310 011111 1234566666652 1222233333
Q ss_pred eCCCeEEEEECCCCeeeEEecC--CCC---CeEEEEEcCCCCEEEEEeCCCcEEEEEc-CCCCeEEEE--------ecCC
Q psy6127 284 KVDATLRYLSLHDNKYVRYFPG--HVR---KVSSLNLSPVDDSFISGSYDKTVRVWDL-RQPNNVGMI--------QLSG 349 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~~--h~~---~v~~l~~~~~~~~l~s~s~dg~i~iwd~-~~~~~~~~~--------~~~~ 349 (515)
+.+.-|.+||.-+|+....+.+ |.+ ...+++|+|||..|++| ..+.|+++|+ +.|.....+ ...+
T Consensus 130 sr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~g 208 (406)
T KOG2919|consen 130 SRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKG 208 (406)
T ss_pred cccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccc
Confidence 6899999999999998877754 433 35689999999999876 4589999999 555432221 1234
Q ss_pred CeeEEEECCCC-CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECCC-
Q psy6127 350 NKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAFN- 426 (515)
Q Consensus 350 ~~~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~~- 426 (515)
-+.+++|+|-. ..+++|+....+-||.-.... .+....+|.+.|+.++|.++|+.|++|+. |-.|..||++.
T Consensus 209 iisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~-----pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~ 283 (406)
T KOG2919|consen 209 IISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR-----PLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYS 283 (406)
T ss_pred eeeeeeccCCCCcceeeecccceeeeEecCCCC-----ceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhc
Confidence 47789999955 589999999998888766644 56666799999999999999999999984 77899999985
Q ss_pred CceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC-CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCE
Q psy6127 427 GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER-GYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNM 505 (515)
Q Consensus 427 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv 505 (515)
+.++..+..|......-.-....|++++|++|+.||.|++||+++ |..+..+.. |...|+.++++|-..++|+++|.
T Consensus 284 ~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~-~sd~vNgvslnP~mpilatssGq- 361 (406)
T KOG2919|consen 284 RDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGN-YSDTVNGVSLNPIMPILATSSGQ- 361 (406)
T ss_pred cchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccc-ccccccceecCcccceeeeccCc-
Confidence 455666776665333233456678999999999999999999998 777777776 99999999999999999999887
Q ss_pred EEEcC
Q psy6127 506 AFWIP 510 (515)
Q Consensus 506 ~iW~~ 510 (515)
+++..
T Consensus 362 r~f~~ 366 (406)
T KOG2919|consen 362 RIFKY 366 (406)
T ss_pred eeecC
Confidence 44433
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=210.57 Aligned_cols=276 Identities=20% Similarity=0.319 Sum_probs=210.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe----eeeEecCC---CCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT----SKNTINSK---KYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~----~~~~~~~~---~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
....+++.+++-..++.++. ..++|+.+.... +...+... ...+..+.|..-...++ ++++..|.|.+||+
T Consensus 40 ~~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlI-AT~s~nG~i~vWdl 117 (839)
T KOG0269|consen 40 AKANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLI-ATCSTNGVISVWDL 117 (839)
T ss_pred cccceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhh-eeecCCCcEEEEec
Confidence 44667778898888888876 468888776432 22222211 23456678875443333 33357999999999
Q ss_pred CC---CeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECC-CCCEEEEEEC
Q psy6127 295 HD---NKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDP-EGLAFAIGVN 368 (515)
Q Consensus 295 ~~---~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~-~~~~l~~g~~ 368 (515)
.. .+.+..|..|...++++.|++... +|++||.||+|++||++..+...++. ....++.+.|+| .+..|+++..
T Consensus 118 nk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~d 197 (839)
T KOG0269|consen 118 NKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHD 197 (839)
T ss_pred CccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecC
Confidence 87 566678899999999999998654 89999999999999999988877764 345689999999 5788999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
.|.+++||+|... +.......|.++|.++.|+|++.+||+|+.|+.|+|||+.+++.-.....+ ...++.++.|
T Consensus 198 sG~lqlWDlRqp~----r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn--Tiapv~rVkW 271 (839)
T KOG0269|consen 198 SGYLQLWDLRQPD----RCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN--TIAPVGRVKW 271 (839)
T ss_pred CceEEEeeccCch----hHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe--ecceeeeeee
Confidence 9999999999865 355556789999999999999999999999999999998765432222211 3455899999
Q ss_pred ecCCC-EEEEEe--CCCcEEEEECCCCeEE-EEEcCCCCCCeEEEEECC-CCCEEEEeeCCEE
Q psy6127 449 TPDSQ-FVASGS--TDGQVHIWNAERGYKV-CVLDGDHPSAVQSLQFNP-KYHMLASACSNMA 506 (515)
Q Consensus 449 sp~g~-~l~sgs--~dg~I~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp-~~~~las~~~dv~ 506 (515)
-|... .||+++ .|-.|+|||+...-.. .++.. |...++.++|.. |...+.+++.|..
T Consensus 272 RP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~e-H~~~vt~i~W~~~d~~~l~s~sKD~t 333 (839)
T KOG0269|consen 272 RPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLE-HTDSVTGIAWDSGDRINLWSCSKDGT 333 (839)
T ss_pred ccCccchhhhhhccccceEEEEeeccccccceeeec-cCccccceeccCCCceeeEeecCccH
Confidence 99875 566655 5778999999876544 45554 999999999977 5567777776643
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-23 Score=192.65 Aligned_cols=289 Identities=15% Similarity=0.209 Sum_probs=232.0
Q ss_pred eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQ 252 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~ 252 (515)
.+.+++|.+..+ +...++.|+.++++.-.-+.-..++.+.--..+|.+.+|.|+|. .+++++.......||+.+
T Consensus 215 ~I~sv~FHp~~p-----lllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ 289 (514)
T KOG2055|consen 215 GITSVQFHPTAP-----LLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLET 289 (514)
T ss_pred CceEEEecCCCc-----eEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccc
Confidence 477888887765 45577888888886422233345666666788999999999998 899999999999999998
Q ss_pred Ceeee--EecCC-CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC
Q psy6127 253 GTSKN--TINSK-KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329 (515)
Q Consensus 253 ~~~~~--~~~~~-~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg 329 (515)
.+..+ ...++ ...+.....+|+++.+++++ ..|.|.+....+++.+..++ -.+.|..++|+.+++.|++++.+|
T Consensus 290 ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G--~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~G 366 (514)
T KOG2055|consen 290 AKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAG--NNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTG 366 (514)
T ss_pred cccccccCCCCcccchhheeEecCCCCeEEEcc--cCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCc
Confidence 76543 23333 34577788899999888775 79999999999999998886 568899999999999999999999
Q ss_pred cEEEEEcCCCCeEEEEecCCCe--eEEEECCCCCEEEEEECCCcEEEEEeecCCC-CCceeeecCCCCCcCeEEEEEcCC
Q psy6127 330 TVRVWDLRQPNNVGMIQLSGNK--PIAAYDPEGLAFAIGVNSDSIKLYDVRSYDK-GPFASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~~~~~--~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
.|.+||++...++..+...+.+ ++++.++++.+||+|+..|.|.|||.++... ...+++.....-...|+++.|+|+
T Consensus 367 eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d 446 (514)
T KOG2055|consen 367 EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHD 446 (514)
T ss_pred eEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcc
Confidence 9999999999999998666554 5688889999999999999999999765221 111233333344567899999999
Q ss_pred CCEEEEEE--CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 407 GKLILVST--NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 407 ~~~l~~~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
++.|+.++ .+..+++-.+.+......++......+.++|++|+|.|.++|.|..+|.|.+|.+.
T Consensus 447 ~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 447 AQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 99998887 46789998888877777777666666779999999999999999999999999874
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=215.78 Aligned_cols=254 Identities=20% Similarity=0.330 Sum_probs=214.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEE
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSL 313 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l 313 (515)
.+++....+-.+++||.+. +..|...+.++..-..+..+ .+|+.|..+.+|.+.....+..+.+|..+|.++
T Consensus 5 ~~~m~~~~~t~Lr~~~~~~------~~~hsaav~~lk~~~s~r~~--~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl 76 (825)
T KOG0267|consen 5 EFLMKTKRATKLRVWDTRE------FVAHSAAVGCLKIRKSSRSL--VTGGEDEKVNLWAIGKPNAITSLTGHESPIESL 76 (825)
T ss_pred cccceeeeeeccccccchh------hhhhhhhhceeeeeccceee--ccCCCceeeccccccCCchhheeeccCCcceee
Confidence 3455555666778888653 34466667777663334333 344588899999998888888899999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCC
Q psy6127 314 NLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 314 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
.|+++..+|++|+.+|+|++||++..+.++++ .+...+..+.|+|-+.+++.|+.|+.+++||.+... +.....
T Consensus 77 ~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G-----c~~~~~ 151 (825)
T KOG0267|consen 77 TFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKG-----CSHTYK 151 (825)
T ss_pred ecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccC-----ceeeec
Confidence 99999999999999999999999999888877 445668889999999999999999999999999644 445555
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
.|...+..+.|+|+|++++.+++|.++++||...|+....|..|... +..+.|+|..-++++|+.|+++++||+++-
T Consensus 152 s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~---v~sle~hp~e~Lla~Gs~d~tv~f~dletf 228 (825)
T KOG0267|consen 152 SHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGK---VQSLEFHPLEVLLAPGSSDRTVRFWDLETF 228 (825)
T ss_pred CCcceeEEEeecCCCceeeccCCcceeeeeccccccccccccccccc---ccccccCchhhhhccCCCCceeeeecccee
Confidence 68889999999999999999999999999999999999998876554 888899999999999999999999999999
Q ss_pred eEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 473 YKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 473 ~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
+.+..... ....|.+.+|+|+++.+.+|...
T Consensus 229 e~I~s~~~-~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 229 EVISSGKP-ETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred EEeeccCC-ccCCceeeeecCCceeeecCchh
Confidence 99988877 67889999999999999988753
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-23 Score=190.73 Aligned_cols=244 Identities=16% Similarity=0.302 Sum_probs=190.3
Q ss_pred cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe----------eeEEecCCCCCeEEEEEcCCCC-EEEEEeCC
Q psy6127 260 NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK----------YVRYFPGHVRKVSSLNLSPVDD-SFISGSYD 328 (515)
Q Consensus 260 ~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~----------~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~d 328 (515)
-.|.+.|+.+.+.|+...++.. .+..+.|.|||..+-. +-.++.+|...-.+++|++... .+++++.|
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt-~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVAT-KTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEe-cCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence 3588999999999998877654 4579999999975432 2236789999888999998765 89999999
Q ss_pred CcEEEEEcCCCCe-------EEEE-ecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeE
Q psy6127 329 KTVRVWDLRQPNN-------VGMI-QLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWT 399 (515)
Q Consensus 329 g~i~iwd~~~~~~-------~~~~-~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~ 399 (515)
++|.+||+..... ...+ .+...+..++|+| +...|++++.|+.+.|||+|+... ........|...+.
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~---~~~~~~~ah~~~vn 276 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTS---KPSHSVKAHSAEVN 276 (422)
T ss_pred CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCC---CCcccccccCCcee
Confidence 9999999976433 2223 4456688899999 556788999999999999997321 23344568899999
Q ss_pred EEEEcC-CCCEEEEEECCCcEEEEECCCCc-eeEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCC----
Q psy6127 400 GLKFSP-DGKLILVSTNGSIIRLFDAFNGN-CVQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNAERG---- 472 (515)
Q Consensus 400 ~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~---- 472 (515)
+++|+| ++..||+|+.|++|++||+++.+ ++..+.+|.. .|..+.|+|+. ..||+++.|+.+.|||+..-
T Consensus 277 ~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~d---ev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq 353 (422)
T KOG0264|consen 277 CVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHED---EVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQ 353 (422)
T ss_pred EEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCc---ceEEEEeCCCCCceeEecccCCcEEEEecccccccc
Confidence 999999 55678899999999999999764 5566666544 49999999975 58899999999999998642
Q ss_pred ----------eEEEEEcCCCCCCeEEEEECCCCCEEE-EeeCC--EEEEcCC
Q psy6127 473 ----------YKVCVLDGDHPSAVQSLQFNPKYHMLA-SACSN--MAFWIPT 511 (515)
Q Consensus 473 ----------~~~~~~~~~h~~~V~~l~~sp~~~~la-s~~~d--v~iW~~~ 511 (515)
+++..-.| |.+.|.++.|+|...+++ +.+.| +.||.+.
T Consensus 354 ~~eda~dgppEllF~HgG-H~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 354 SPEDAEDGPPELLFIHGG-HTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ChhhhccCCcceeEEecC-cccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 23344444 999999999999777654 45544 9999876
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=175.70 Aligned_cols=272 Identities=17% Similarity=0.227 Sum_probs=209.4
Q ss_pred eeeeCCCCcEEEEccceeeeeE------------ee---eeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCe
Q psy6127 191 LAHSRSSRTITKCSENLVRSYR------------VA---KVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGT 254 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~------------~~---~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~ 254 (515)
+..|+..|+.+.+|| ++.-. |+ ..-.+|.-.|.++.|-| |...+.++|-|.++++||..+-+
T Consensus 58 ymlSGgadgsi~v~D--l~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ 135 (397)
T KOG4283|consen 58 YMLSGGADGSIAVFD--LQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQ 135 (397)
T ss_pred EEeecCCCccEEEEE--eccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccce
Confidence 445888999999998 43322 11 11247888999999999 77789999999999999999988
Q ss_pred eeeEecCCCCceeEEEEecCCC-eEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEE
Q psy6127 255 SKNTINSKKYGVDLIKFTHSKT-TAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVR 332 (515)
Q Consensus 255 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~ 332 (515)
....++.. +.|..-+++|-.. +-+++.|..+-.|++-|+.+|.+.+++.||.+.|.++.|+|... .|++|+.||.|+
T Consensus 136 ~a~~F~me-~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~ir 214 (397)
T KOG4283|consen 136 EAVDFKME-GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIR 214 (397)
T ss_pred eeEEeecC-ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEE
Confidence 88877754 6788888988654 45556666899999999999999999999999999999999887 588999999999
Q ss_pred EEEcCCC-CeEEEE---------------ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCC-CCC
Q psy6127 333 VWDLRQP-NNVGMI---------------QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG-ERG 395 (515)
Q Consensus 333 iwd~~~~-~~~~~~---------------~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~ 395 (515)
+||++.. .+...+ .+.+.+..++|+.++.++++.+.|..+++|+..+++........... ...
T Consensus 215 lWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~ 294 (397)
T KOG4283|consen 215 LWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTT 294 (397)
T ss_pred EEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccc
Confidence 9999865 343333 23445778999999999999999999999999887643222111110 001
Q ss_pred cCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
+.-..+. +.+...++.--.++.+.++++-.+..++.+..|... +.+.++-|+-+...+|..|+.|..|-.
T Consensus 295 ~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~---i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 295 SFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKR---INCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred cceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeecccce---eeEEeecCchhhhhccccCCccccccc
Confidence 1101122 334445554556689999999999999999887433 889999999999999999999999986
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=178.99 Aligned_cols=269 Identities=19% Similarity=0.278 Sum_probs=211.2
Q ss_pred eCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEec
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTH 273 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 273 (515)
.+-.++-+.+|| ..++...+.+.+|..+|++++||+||+.|+|+|.|..|.+||+..|.+++.+.. ..+|+...|+|
T Consensus 40 vGc~nG~vvI~D--~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf-~spv~~~q~hp 116 (405)
T KOG1273|consen 40 VGCANGRVVIYD--FDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF-DSPVWGAQWHP 116 (405)
T ss_pred eeccCCcEEEEE--ccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc-cCccceeeecc
Confidence 566778899999 888889999999999999999999999999999999999999999999888875 47899999999
Q ss_pred CCCeEEEEEeeCCCeEEEEECCCCeeeEEecC-CC----CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC
Q psy6127 274 SKTTAIHASTKVDATLRYLSLHDNKYVRYFPG-HV----RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS 348 (515)
Q Consensus 274 ~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~-h~----~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 348 (515)
.....++++- .+..-.+.++..++.. .+.. .. ....+..|.+.|+++++|...|.+.++|..+.+++..+...
T Consensus 117 ~k~n~~va~~-~~~sp~vi~~s~~~h~-~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rit 194 (405)
T KOG1273|consen 117 RKRNKCVATI-MEESPVVIDFSDPKHS-VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRIT 194 (405)
T ss_pred ccCCeEEEEE-ecCCcEEEEecCCcee-eccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeec
Confidence 8887777763 4555666666553221 1111 11 12233468889999999999999999999999999887543
Q ss_pred --CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC-------CceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CCc
Q psy6127 349 --GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG-------PFASFKCPGERGCEWTGLKFSPDGKLILVSTN-GSI 418 (515)
Q Consensus 349 --~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~-------~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg~ 418 (515)
..+..+.++..|+.|+.-+.|..||.|+++.-... +...+. .--....+.+++||.+|.|++.++. -..
T Consensus 195 s~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~q-DvVNk~~Wk~ccfs~dgeYv~a~s~~aHa 273 (405)
T KOG1273|consen 195 SVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQ-DVVNKLQWKKCCFSGDGEYVCAGSARAHA 273 (405)
T ss_pred hheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHH-HHHhhhhhhheeecCCccEEEecccccee
Confidence 45888999999999999999999999998742110 001110 0112335678999999999987774 457
Q ss_pred EEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 419 IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 419 i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
++||....|..++.+.+..+.. ...+.|+|-...+++- ..|.|++|....
T Consensus 274 LYIWE~~~GsLVKILhG~kgE~--l~DV~whp~rp~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 274 LYIWEKSIGSLVKILHGTKGEE--LLDVNWHPVRPIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred EEEEecCCcceeeeecCCchhh--eeecccccceeeeeec-cCCceEEEEeec
Confidence 9999999999999998866433 6789999998888877 788999998654
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=211.93 Aligned_cols=238 Identities=18% Similarity=0.332 Sum_probs=209.8
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
+.+..|...|.++..-..++.+++|+.|..+-+|.+.....+..+.+|+.+|.++.|+++...+..+ ..+|+|++||+
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Llaag--sasgtiK~wDl 99 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAG--SASGTIKVWDL 99 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhccc--ccCCceeeeeh
Confidence 3466899999999987788999999999999999998888888899999999999999988655544 47999999999
Q ss_pred CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEE
Q psy6127 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIK 373 (515)
Q Consensus 295 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~ 373 (515)
+.++.++++.+|...+.++.|+|-+.++++|+.|+.+++||.+...|...+. +...+.++.|+|+|++++.|++|.+++
T Consensus 100 eeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvk 179 (825)
T KOG0267|consen 100 EEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVK 179 (825)
T ss_pred hhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceee
Confidence 9999999999999999999999999999999999999999999888888885 445578899999999999999999999
Q ss_pred EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 374 LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
+||...++ .......|.+.+..+.|+|..-.++.|+.|+++++||+++...+...... ...|.+.+|+|+++
T Consensus 180 i~d~~agk-----~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~---~~~v~~~~fn~~~~ 251 (825)
T KOG0267|consen 180 IWDLTAGK-----LSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPE---TDGVRSLAFNPDGK 251 (825)
T ss_pred eecccccc-----cccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCc---cCCceeeeecCCce
Confidence 99998765 44455678888999999999999999999999999999988777666554 34499999999999
Q ss_pred EEEEEeCCC
Q psy6127 454 FVASGSTDG 462 (515)
Q Consensus 454 ~l~sgs~dg 462 (515)
.+++|....
T Consensus 252 ~~~~G~q~s 260 (825)
T KOG0267|consen 252 IVLSGEQIS 260 (825)
T ss_pred eeecCchhh
Confidence 999886554
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-22 Score=176.19 Aligned_cols=254 Identities=19% Similarity=0.298 Sum_probs=195.3
Q ss_pred CCcEEEEccceeeeeEee----eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEe
Q psy6127 197 SRTITKCSENLVRSYRVA----KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFT 272 (515)
Q Consensus 197 ~~~~i~~wd~~~~~~~~~----~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 272 (515)
.+.++..||..++-++.- +..-.|..++.+++|.++ ..+++|+.||.|+.+|+.++.. ..+..|..++.|+.++
T Consensus 26 ~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~-~~igth~~~i~ci~~~ 103 (323)
T KOG1036|consen 26 SDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE-DQIGTHDEGIRCIEYS 103 (323)
T ss_pred CcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc-eeeccCCCceEEEEee
Confidence 445566677666655442 223358999999999975 4688999999999999987665 4567799999999999
Q ss_pred cCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE---ecCC
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI---QLSG 349 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~ 349 (515)
+....++++ ++|++|++||.+.......+.. ...|.++... ++.|+.|+.|..+.+||+++....... ...-
T Consensus 104 ~~~~~vIsg--sWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lky 178 (323)
T KOG1036|consen 104 YEVGCVISG--SWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKY 178 (323)
T ss_pred ccCCeEEEc--ccCccEEEEecccccccccccc-CceEEEEecc--CCEEEEeecCceEEEEEcccccchhhhcccccee
Confidence 877666544 5999999999998666655553 3478888887 788999999999999999987654422 3444
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC--CceeeecCC------CCCcCeEEEEEcCCCCEEEEEECCCcEEE
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG--PFASFKCPG------ERGCEWTGLKFSPDGKLILVSTNGSIIRL 421 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~--~~~~~~~~~------~~~~~i~~l~~sp~~~~l~~~s~dg~i~i 421 (515)
.++++++-|++.-+++++-||.|.+=.++..+.. ....+++.. ...-+|++++|+|-...+++|+.||.|.+
T Consensus 179 qtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~ 258 (323)
T KOG1036|consen 179 QTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNI 258 (323)
T ss_pred EEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEE
Confidence 5889999999999999999999987666543111 111222211 11237899999999999999999999999
Q ss_pred EECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC
Q psy6127 422 FDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 422 wd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
||..+.+.+..+..... .|.+++|+.+|..||+++.
T Consensus 259 Wd~~~rKrl~q~~~~~~---SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 259 WDLFNRKRLKQLAKYET---SISSLSFSMDGSLLAIASS 294 (323)
T ss_pred ccCcchhhhhhccCCCC---ceEEEEeccCCCeEEEEec
Confidence 99999998888876533 3899999999999999873
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.7e-23 Score=190.88 Aligned_cols=281 Identities=14% Similarity=0.235 Sum_probs=212.9
Q ss_pred EEEccceeeeeEeeeeccccC--CcEEEEEEcCCCCEEEEE--eCCCeEEEEECCCC--eeeeEecCCCCceeEEEEecC
Q psy6127 201 TKCSENLVRSYRVAKVFRENT--DKINSLDYSSDGSLLISC--SDDDQIIIYDCEQG--TSKNTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 201 i~~wd~~~~~~~~~~~~~~h~--~~I~~l~~spd~~~lasg--s~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~ 274 (515)
+++|| +........+-.|+ ..+.++.|+.... |+++ +.|..+++|.-... +....-......-.|++....
T Consensus 14 ~kl~D--~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~ 90 (673)
T KOG4378|consen 14 TKLSD--FSDLETKSEYVHQTAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQ 90 (673)
T ss_pred eEEee--cccccCccccccCCCCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhc
Confidence 78888 55554444444333 3488999987653 4444 56788999974322 121111111223344443333
Q ss_pred CCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC--CCee
Q psy6127 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS--GNKP 352 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~ 352 (515)
. ++.++|+..+.|+|||++...+.+.+++|.+.|+++.++....+|++++..|.|.+..+.++.....+.+. ..++
T Consensus 91 S--~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvR 168 (673)
T KOG4378|consen 91 S--LYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVR 168 (673)
T ss_pred c--eeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEE
Confidence 3 45556678999999999987788889999999999999999999999999999999999999888888655 3466
Q ss_pred EEEECCCCCE-EEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCcee
Q psy6127 353 IAAYDPEGLA-FAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCV 430 (515)
Q Consensus 353 ~~~~s~~~~~-l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~ 430 (515)
.+.++|..+. |.+++.+|.|.+||+.... ..+.....|..+...|+|+|.. ..|++.+.|..|.+||++..+..
T Consensus 169 ll~ys~skr~lL~~asd~G~VtlwDv~g~s----p~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~ 244 (673)
T KOG4378|consen 169 LLRYSPSKRFLLSIASDKGAVTLWDVQGMS----PIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAST 244 (673)
T ss_pred EeecccccceeeEeeccCCeEEEEeccCCC----cccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccc
Confidence 8999997765 5668899999999998754 2344456788889999999954 57788899999999999877666
Q ss_pred EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC-eEEEEEcCCCCCCeEEEEECCCC
Q psy6127 431 QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG-YKVCVLDGDHPSAVQSLQFNPKY 495 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~-~~~~~~~~~h~~~V~~l~~sp~~ 495 (515)
..+.. ..+...++|+++|.+|++|+..|.|..||++.. .++.++.. |...|++++|-|..
T Consensus 245 ~~l~y----~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sa-h~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 245 DRLTY----SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSA-HDASVTRVAFQPSP 305 (673)
T ss_pred ceeee----cCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeee-cccceeEEEeeecc
Confidence 65553 334789999999999999999999999999765 56666665 99999999998865
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-22 Score=195.29 Aligned_cols=123 Identities=20% Similarity=0.372 Sum_probs=105.8
Q ss_pred EeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeee------eEecCCCCceeEEEEecCCCeEEEEEee
Q psy6127 212 RVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSK------NTINSKKYGVDLIKFTHSKTTAIHASTK 284 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~s~~ 284 (515)
+.+..+.+|.+.|+.+.|+| +..+||+||.|..|+||.+..|-.. ..+.+..-.+.++.|+|..+.++..+
T Consensus 70 r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~-- 147 (1012)
T KOG1445|consen 70 RDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASG-- 147 (1012)
T ss_pred cccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEec--
Confidence 34566889999999999999 5668999999999999999854221 12334456789999999988877665
Q ss_pred CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy6127 285 VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDL 336 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~ 336 (515)
..|++++||+.+++.+..+.+|.+.|.++.|+.||..+++++.|..|+|||.
T Consensus 148 a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDP 199 (1012)
T KOG1445|consen 148 AHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDP 199 (1012)
T ss_pred cCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCC
Confidence 4899999999999999999999999999999999999999999999999997
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.7e-22 Score=197.81 Aligned_cols=243 Identities=17% Similarity=0.233 Sum_probs=202.5
Q ss_pred cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy6127 260 NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 260 ~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~ 338 (515)
..|..+-+.++|.|+|..+++++ .||.|++|+.... +...++..+...|.+++.. +.+|++|+.+++|.+|...+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcg--sdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps 85 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCG--SDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPS 85 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEec--CCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCC
Confidence 36788899999999999666554 7999999997665 4444444477888888876 55899999999999999998
Q ss_pred CCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC
Q psy6127 339 PNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS 417 (515)
Q Consensus 339 ~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg 417 (515)
++.-..+ ...-++++++++-+|+++|.|+.|-.|++.++.... ......+|..+|.++.|+|++++||+.+.||
T Consensus 86 ~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s-----~~~~lrgh~apVl~l~~~p~~~fLAvss~dG 160 (933)
T KOG1274|consen 86 GEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSS-----QEKVLRGHDAPVLQLSYDPKGNFLAVSSCDG 160 (933)
T ss_pred CCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccc-----hheeecccCCceeeeeEcCCCCEEEEEecCc
Confidence 8765443 445568999999999999999999999999988755 4444568999999999999999999999999
Q ss_pred cEEEEECCCCceeEEeeccccC-----CCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCC-CeEEEEE
Q psy6127 418 IIRLFDAFNGNCVQSLSGVLNN-----NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPS-AVQSLQF 491 (515)
Q Consensus 418 ~i~iwd~~~~~~~~~~~~~~~~-----~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~-~V~~l~~ 491 (515)
.|++||+.++.+..++.+.... ...+..++|+|+|..++..+.|+.|++|+..+++....+...+.. .+.+++|
T Consensus 161 ~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~w 240 (933)
T KOG1274|consen 161 KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQW 240 (933)
T ss_pred eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEE
Confidence 9999999999887777654332 233577899999888888889999999999999999988874443 4999999
Q ss_pred CCCCCEEEEeeC--CEEEEcCC
Q psy6127 492 NPKYHMLASACS--NMAFWIPT 511 (515)
Q Consensus 492 sp~~~~las~~~--dv~iW~~~ 511 (515)
+|.|+|||+++- .+.|||++
T Consensus 241 sPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 241 SPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred cCCCcEEeeeccCCcEEEEecc
Confidence 999999999984 49999987
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=193.99 Aligned_cols=274 Identities=19% Similarity=0.207 Sum_probs=204.6
Q ss_pred eCCCCcEEEEccceeeeeEe----eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE--ecCCCCcee
Q psy6127 194 SRSSRTITKCSENLVRSYRV----AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT--INSKKYGVD 267 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~----~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~--~~~~~~~v~ 267 (515)
-++.++.|.+.|..-..+++ +..+..|.+.|..+.|.|....|++++.|.++++||++++++... +.+|...|.
T Consensus 69 vadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~Svk 148 (720)
T KOG0321|consen 69 VADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVK 148 (720)
T ss_pred EecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccc
Confidence 56777778888744333331 345678999999999999777899999999999999999888776 899999999
Q ss_pred EEEEecCCCeEEEEEeeCCCeEEEEECCCCee---------------------------eEEecCCCCCeEE---EEEcC
Q psy6127 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKY---------------------------VRYFPGHVRKVSS---LNLSP 317 (515)
Q Consensus 268 ~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~---------------------------~~~~~~h~~~v~~---l~~~~ 317 (515)
+++|.|.+..+++ +|+.||.|.|||++-... +.....|...|.+ +.+..
T Consensus 149 S~cf~~~n~~vF~-tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fk 227 (720)
T KOG0321|consen 149 SECFMPTNPAVFC-TGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFK 227 (720)
T ss_pred hhhhccCCCccee-eccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEe
Confidence 9999999876654 557999999999864320 1112234445555 56667
Q ss_pred CCCEEEEEeC-CCcEEEEEcCCCCeEEEE--------ec----CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCC
Q psy6127 318 VDDSFISGSY-DKTVRVWDLRQPNNVGMI--------QL----SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGP 384 (515)
Q Consensus 318 ~~~~l~s~s~-dg~i~iwd~~~~~~~~~~--------~~----~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~ 384 (515)
|...||+++. |+.|++||++........ .. ...+.++..+..|.++.+.+.|+.|+.|++......+
T Consensus 228 De~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP 307 (720)
T KOG0321|consen 228 DESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISP 307 (720)
T ss_pred ccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCc
Confidence 7888999888 999999999976554332 11 1235677888888999888899999999999877665
Q ss_pred ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce-eEEeeccccCCCCCEEEEEecCC-CEEEEEeCCC
Q psy6127 385 FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC-VQSLSGVLNNNASPLEATFTPDS-QFVASGSTDG 462 (515)
Q Consensus 385 ~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg 462 (515)
...+.........+ .-..+|++.++++|+.|...++|.+.+.+. ...+.+|.. .|++++|.|.. .-++++++|.
T Consensus 308 ~~~~sg~~~~sf~v-ks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~---eVt~V~w~pS~~t~v~TcSdD~ 383 (720)
T KOG0321|consen 308 VAEFSGKLNSSFYV-KSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTR---EVTTVRWLPSATTPVATCSDDF 383 (720)
T ss_pred hhhccCcccceeee-eeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcce---EEEEEeeccccCCCceeeccCc
Confidence 55444322222222 456789999999999999999999987653 334445444 48999998853 3466779999
Q ss_pred cEEEEECCCC
Q psy6127 463 QVHIWNAERG 472 (515)
Q Consensus 463 ~I~iwd~~~~ 472 (515)
.+++|++..+
T Consensus 384 ~~kiW~l~~~ 393 (720)
T KOG0321|consen 384 RVKIWRLSNG 393 (720)
T ss_pred ceEEEeccCc
Confidence 9999999665
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-22 Score=184.54 Aligned_cols=295 Identities=18% Similarity=0.259 Sum_probs=217.9
Q ss_pred cCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccce--eeeeEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeE
Q psy6127 169 ESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENL--VRSYRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQI 245 (515)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~--~~~~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i 245 (515)
..+.-.+.++.|.|..... +.+.++..+.|.+|+-. .+...-+..+..|..+|.++.|+| +...+++.|.||+|
T Consensus 183 kv~~~Rit~l~fHPt~~~~---lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGti 259 (498)
T KOG4328|consen 183 KVTDRRITSLAFHPTENRK---LVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTI 259 (498)
T ss_pred EecccceEEEEecccCcce---EEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCcee
Confidence 3333346666666655433 55689999999999932 234455677899999999999999 55788999999999
Q ss_pred EEEECCCCeeee--EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee-eEEecCCCCCeEEEEEcCCCC-E
Q psy6127 246 IIYDCEQGTSKN--TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY-VRYFPGHVRKVSSLNLSPVDD-S 321 (515)
Q Consensus 246 ~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~-~ 321 (515)
++-|++++.... .+.........+.|+.+...++++. .=|...+||.+++.. ...+.-|...|.+++++|... +
T Consensus 260 R~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~--~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~ 337 (498)
T KOG4328|consen 260 RLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGD--NVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWF 337 (498)
T ss_pred eeeeecchhhHHHhhcCccceeeeeccccCCCccEEEee--cccceEEEEeecCCccchhhhhhhcccceeecCCCCchh
Confidence 999998764433 3333556677888888887777665 455899999988765 566677999999999999876 7
Q ss_pred EEEEeCCCcEEEEEcCCCCe-----EEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec--CCCCCceeeecCCCC
Q psy6127 322 FISGSYDKTVRVWDLRQPNN-----VGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS--YDKGPFASFKCPGER 394 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~--~~~~~~~~~~~~~~~ 394 (515)
|+++|.|++.+|||++.... +..+.+...|.+..|||.+..|++.+.|..|+|||..- ....+...+.....+
T Consensus 338 laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t 417 (498)
T KOG4328|consen 338 LATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRT 417 (498)
T ss_pred eeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcc
Confidence 99999999999999986432 45567778899999999988899999999999999841 111222223222222
Q ss_pred CcC--eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCC-EEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy6127 395 GCE--WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP-LEATFTPDSQFVASG-STDGQVHIWNAE 470 (515)
Q Consensus 395 ~~~--i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i-~~~~~sp~g~~l~sg-s~dg~I~iwd~~ 470 (515)
... .....|.|+..++++|..-..|-++|-..++.+..+...... .| .-..|+|-+..+++| +..|.|+||--+
T Consensus 418 ~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~--tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 418 GRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESS--TIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred cccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCcccc--ccccceeecccccceeccCCccceEEEEecC
Confidence 222 235789999999999999899999998888877766543321 23 335899988845554 567889988654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=203.10 Aligned_cols=232 Identities=20% Similarity=0.268 Sum_probs=190.9
Q ss_pred eeeeCCCCcEEEEccceeee---eEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCce
Q psy6127 191 LAHSRSSRTITKCSENLVRS---YRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGV 266 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~---~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v 266 (515)
+.++++..+.|.+|| +.. -+.+..|..|+..|+++.|++ ...+|++||.||+|++||++..+...++.+....|
T Consensus 102 lIAT~s~nG~i~vWd--lnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESi 179 (839)
T KOG0269|consen 102 LIATCSTNGVISVWD--LNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESI 179 (839)
T ss_pred hheeecCCCcEEEEe--cCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhh
Confidence 556888899999999 544 455678999999999999998 56789999999999999999999999999999999
Q ss_pred eEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe--EE
Q psy6127 267 DLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN--VG 343 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~--~~ 343 (515)
..+.|+|.....+++. ...|.+++||++.. ++...+..|.++|.|+.|+|++.+|||||.|++|+|||..+++. +.
T Consensus 180 RDV~fsp~~~~~F~s~-~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~ 258 (839)
T KOG0269|consen 180 RDVKFSPGYGNKFASI-HDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKH 258 (839)
T ss_pred hceeeccCCCceEEEe-cCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcccee
Confidence 9999999876655444 67999999999764 56678899999999999999999999999999999999986544 45
Q ss_pred EEecCCCeeEEEECCCCCE-EEEEE--CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcE
Q psy6127 344 MIQLSGNKPIAAYDPEGLA-FAIGV--NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSII 419 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~-l~~g~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i 419 (515)
++..-.++..+.|-|...+ |++++ .|-.|+|||++..- ........|...++.++|.. |...+.+++.||++
T Consensus 259 tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPY----IP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv 334 (839)
T KOG0269|consen 259 TINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPY----IPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTV 334 (839)
T ss_pred EEeecceeeeeeeccCccchhhhhhccccceEEEEeecccc----ccceeeeccCccccceeccCCCceeeEeecCccHH
Confidence 5566677899999997655 55554 57889999998632 34455667888899999976 45578899999988
Q ss_pred EEEECCCCce
Q psy6127 420 RLFDAFNGNC 429 (515)
Q Consensus 420 ~iwd~~~~~~ 429 (515)
..-.++++..
T Consensus 335 ~qh~~knat~ 344 (839)
T KOG0269|consen 335 LQHLFKNATT 344 (839)
T ss_pred HHhhhhcccC
Confidence 7666655543
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-22 Score=180.45 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=190.4
Q ss_pred eeccccCCcEEEEEEcCCC--CEEEEEeCCCeEEEEECCC----------------CeeeeEecCCCCceeEEEEecCCC
Q psy6127 215 KVFRENTDKINSLDYSSDG--SLLISCSDDDQIIIYDCEQ----------------GTSKNTINSKKYGVDLIKFTHSKT 276 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~--~~lasgs~dg~i~iwd~~~----------------~~~~~~~~~~~~~v~~~~~~~~~~ 276 (515)
...-+|.+.++.+.-++-+ .+.|+-+..|.|+||++.. .+++.++.+|...=..++|+|-..
T Consensus 145 ~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~ 224 (440)
T KOG0302|consen 145 MKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKT 224 (440)
T ss_pred ccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccc
Confidence 3455788888888888754 5666777889999999742 256778899999999999999443
Q ss_pred eEEEEEeeCCCeEEEEECCCCeee---EEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC---CeEEEEecCC
Q psy6127 277 TAIHASTKVDATLRYLSLHDNKYV---RYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQP---NNVGMIQLSG 349 (515)
Q Consensus 277 ~l~~~s~~~d~~v~vwd~~~~~~~---~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~ 349 (515)
. .+++|+--+.|++|...++.-. ..+.+|+..|-.++|+|..+ .|++||.||+|+|||+|.+ .++..-.+.+
T Consensus 225 g-~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~s 303 (440)
T KOG0302|consen 225 G-RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNS 303 (440)
T ss_pred c-ccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCC
Confidence 3 2345455788999999887543 34678999999999999755 8999999999999999998 4555556777
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCc
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
.++.++|+..-.+|++|+.||+++|||+|..+.. ........|..+|+++.|+|. ...|++++.|..|.+||+....
T Consensus 304 DVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~--~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~ 381 (440)
T KOG0302|consen 304 DVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG--QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEA 381 (440)
T ss_pred ceeeEEccCCcceeeecCCCceEEEEEhhhccCC--CcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccC
Confidence 8999999999889999999999999999986544 344445688999999999995 4578888999999999985321
Q ss_pred e----------------eEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEE
Q psy6127 429 C----------------VQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWN 468 (515)
Q Consensus 429 ~----------------~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd 468 (515)
- .+.+..|.+ ...+..+.|+++- .++++.+.|| +.||.
T Consensus 382 D~ee~~~~a~~~L~dlPpQLLFVHqG-Qke~KevhWH~QiPG~lvsTa~dG-fnVfk 436 (440)
T KOG0302|consen 382 DEEEIDQEAAEGLQDLPPQLLFVHQG-QKEVKEVHWHRQIPGLLVSTAIDG-FNVFK 436 (440)
T ss_pred ChhhhccccccchhcCCceeEEEecc-hhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence 1 112222322 2337788899864 4777878888 55553
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-22 Score=176.34 Aligned_cols=299 Identities=16% Similarity=0.291 Sum_probs=214.6
Q ss_pred eeeEeee-eccccCCcEEEEEEcC-----CCCEEEEEeCCCeEEEEECCCCeeeeEec-----CCCCceeEEEEecCC--
Q psy6127 209 RSYRVAK-VFRENTDKINSLDYSS-----DGSLLISCSDDDQIIIYDCEQGTSKNTIN-----SKKYGVDLIKFTHSK-- 275 (515)
Q Consensus 209 ~~~~~~~-~~~~h~~~I~~l~~sp-----d~~~lasgs~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~-- 275 (515)
+.+++.. ...+|+.+|..++|++ +-+.+|+++. +.+.+|.......++.++ .|......++|+-+-
T Consensus 25 ~~yk~t~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~ 103 (385)
T KOG1034|consen 25 RSYKYTNHLKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNT 103 (385)
T ss_pred cceEeeeehhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCC
Confidence 3455543 3457899999999996 2345666665 678999887543333332 355667788887653
Q ss_pred -CeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCeEEEE----ecCC
Q psy6127 276 -TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNNVGMI----QLSG 349 (515)
Q Consensus 276 -~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~ 349 (515)
+-+++++ +.-|.|+|.|+.++++...+.+|...|+.+.+.|+. ++++++|.|.+|++|++++..++..+ .|.+
T Consensus 104 ~~p~la~~-G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrd 182 (385)
T KOG1034|consen 104 GNPFLAAG-GYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRD 182 (385)
T ss_pred CCeeEEee-cceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccC
Confidence 3344444 489999999999999999999999999999999986 48999999999999999999999988 4556
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC----------------C-------ceeeecCCCCCcCeEEEEEcCC
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG----------------P-------FASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~----------------~-------~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
.+.++.|+++|.++++++.|.++++|++...+.. + ...+.....|...|-++.|-
T Consensus 183 eVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~-- 260 (385)
T KOG1034|consen 183 EVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF-- 260 (385)
T ss_pred cEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--
Confidence 7999999999999999999999999999842210 0 00011122344445555553
Q ss_pred CCEEEEEECCCcEEEEEC-CCCceeEE----------eeccccCCCCCEEE--EEecCCCEEEEEeCCCcEEEEECCCCe
Q psy6127 407 GKLILVSTNGSIIRLFDA-FNGNCVQS----------LSGVLNNNASPLEA--TFTPDSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 407 ~~~l~~~s~dg~i~iwd~-~~~~~~~~----------~~~~~~~~~~i~~~--~~sp~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
|+++++-+-++.|..|.. +-++.+.. +....-....++-+ +|.|-+++||.|...|.|++||++..+
T Consensus 261 gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~e 340 (385)
T KOG1034|consen 261 GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNE 340 (385)
T ss_pred hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCC
Confidence 578899888999999986 22221111 11111112224444 556678999999999999999998776
Q ss_pred EEE--EEc-CCCCCCeEEEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 474 KVC--VLD-GDHPSAVQSLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 474 ~~~--~~~-~~h~~~V~~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
+.. ++. ......|...+|+.|+.+|+....+..||.++
T Consensus 341 p~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 341 PPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWD 381 (385)
T ss_pred CccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEE
Confidence 531 111 11346799999999999999999998888765
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-19 Score=180.16 Aligned_cols=354 Identities=29% Similarity=0.438 Sum_probs=264.9
Q ss_pred hheeecccccccccccCCCCcCCCcchhhcc-ccccccCCce-eEEEEEE-eeccccceeeeeeeCCCCcEEEEccceee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLH-SLSSLESPHF-VSLFVTF-VSRVLTMAASLAHSRSSRTITKCSENLVR 209 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~-~l~~~~~~~~-~~~~~~~-~~~~~~~~~~l~~s~~~~~~i~~wd~~~~ 209 (515)
..++.+..++.+ .+|+...+. .+..+.+... .+..... .+... ..+......++.+.+|+ ..
T Consensus 78 ~~~~~~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~--~~ 142 (466)
T COG2319 78 ELLLSGSSDGTI----------KLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGN---SILLASSSLDGTVKLWD--LS 142 (466)
T ss_pred cEEEEecCCCcE----------EEEEcCCCceeEEEEeccCCCceeeEEEECCCcc---eEEeccCCCCccEEEEE--ec
Confidence 445555566777 899988887 6666666432 2222222 22221 11333455588999998 66
Q ss_pred e-eEeeeeccccCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 210 S-YRVAKVFRENTDKINSLDYSSDGSLLISCSD-DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 210 ~-~~~~~~~~~h~~~I~~l~~spd~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
. ......+.+|...|.+++|+|+++++++++. |+.+++|+...+.....+.+|...+.+++|+|++..++ ++++.|+
T Consensus 143 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~d~ 221 (466)
T COG2319 143 TPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLI-ASGSSDG 221 (466)
T ss_pred CCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEE-EEecCCC
Confidence 5 6778889999999999999999999999986 99999999999889999999999999999999887333 3345899
Q ss_pred eEEEEECCCCeeeE-EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe-EEEE-ecCCCeeEEEECCCCCEEE
Q psy6127 288 TLRYLSLHDNKYVR-YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN-VGMI-QLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 288 ~v~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~-~~~~~~~~~~~s~~~~~l~ 364 (515)
.+++||...+.... .+.+|.... ...|+|++..+++++.|+.+++||.+.... ...+ .+...+.++.|+|++..++
T Consensus 222 ~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 300 (466)
T COG2319 222 TIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLA 300 (466)
T ss_pred cEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEE
Confidence 99999998888887 688898886 448999998999999999999999997765 4333 3456688899999988888
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE-ECCCcEEEEECCCCceeEEeeccccCCCCC
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS-TNGSIIRLFDAFNGNCVQSLSGVLNNNASP 443 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 443 (515)
+++.|+.+.+||........... ...+...+..+.|.+++..++.+ ..|+.+.+|+............... +
T Consensus 301 ~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~----~ 373 (466)
T COG2319 301 SGSSDGTVRLWDLETGKLLSSLT---LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN----V 373 (466)
T ss_pred EeeCCCcEEEEEcCCCceEEEee---ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCce----E
Confidence 89889999999887654211111 23455578889994343566655 6788999999988772222222111 6
Q ss_pred EEEEEecCCCEEEE-EeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC--CEEEEcCCC
Q psy6127 444 LEATFTPDSQFVAS-GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS--NMAFWIPTL 512 (515)
Q Consensus 444 ~~~~~sp~g~~l~s-gs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--dv~iW~~~~ 512 (515)
..+.+++ ...+.. +..++.+.+|+............ +...+....+++++..+++++. .+++|+...
T Consensus 374 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 374 LSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDG-HTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred EEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccC-CCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 7888888 544444 68899999999999888887775 3378999999999999988553 499998754
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-20 Score=165.62 Aligned_cols=249 Identities=16% Similarity=0.284 Sum_probs=185.4
Q ss_pred cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC----eeeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEE
Q psy6127 260 NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN----KYVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVRV 333 (515)
Q Consensus 260 ~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~i 333 (515)
.+|..-|.++.|.+.|+++++++ .|++|+|||.+.. .+....+.|.+.|..+.|.+- |+.+++++.|+++.|
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCS--sDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCS--SDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred cCCcceeeeeeecccCceeeecc--CCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence 46778899999999999988776 6999999996543 355667889999999999653 789999999999999
Q ss_pred EEcCC-------CCeE--EEE-ecCCCeeEEEECC--CCCEEEEEECCCcEEEEEeecCCCCC----ceee----ecCCC
Q psy6127 334 WDLRQ-------PNNV--GMI-QLSGNKPIAAYDP--EGLAFAIGVNSDSIKLYDVRSYDKGP----FASF----KCPGE 393 (515)
Q Consensus 334 wd~~~-------~~~~--~~~-~~~~~~~~~~~s~--~~~~l~~g~~dg~i~i~d~~~~~~~~----~~~~----~~~~~ 393 (515)
|.-.. .+.+ .++ .....+..+.|.| -|-.+++++.||.+|||+.-...... ...+ ..+..
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 97521 1111 122 3445688999999 47889999999999999876532110 1111 12344
Q ss_pred CCcCeEEEEEcCC---CCEEEEEECC-----CcEEEEECCCCc-eeEEeeccccCCCCCEEEEEecC----CCEEEEEeC
Q psy6127 394 RGCEWTGLKFSPD---GKLILVSTNG-----SIIRLFDAFNGN-CVQSLSGVLNNNASPLEATFTPD----SQFVASGST 460 (515)
Q Consensus 394 ~~~~i~~l~~sp~---~~~l~~~s~d-----g~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~sp~----g~~l~sgs~ 460 (515)
+..+..++.|+|. ..+|++|+.+ +.++||....+. .........++..+|++++|.|+ ...||+++.
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence 5667779999984 4688888866 578899765432 33333333456677999999996 358999999
Q ss_pred CCcEEEEECCCC--------------------eEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 461 DGQVHIWNAERG--------------------YKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 461 dg~I~iwd~~~~--------------------~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
|| |+||++... +.+..+.+ |.+.|+.+.|+-.|.+|++++.| +|+|....
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~-H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany 319 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDD-HNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY 319 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccC-CCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence 99 999998731 34445555 99999999999999999998855 89997543
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=182.76 Aligned_cols=281 Identities=14% Similarity=0.144 Sum_probs=213.6
Q ss_pred CCcchhhccccccccCCce--eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEe--eeeccccCCcEEEEEEc
Q psy6127 155 GSWDFELLHSLSSLESPHF--VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRV--AKVFRENTDKINSLDYS 230 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~--~~~~~~h~~~I~~l~~s 230 (515)
++||.........+-.+.. .+..+.+..+.. . +..+.++|.++++|...-+..+. +..+.|. .-.|++..
T Consensus 15 kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-l---vvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~ 88 (673)
T KOG4378|consen 15 KLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNF-L---VVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACA 88 (673)
T ss_pred EEeecccccCccccccCCCCCcceeeeccccce-E---EEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhh
Confidence 8999988877666655533 255555554442 1 33477888999999754443323 2333333 44555555
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC-CCC
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH-VRK 309 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h-~~~ 309 (515)
....|+++|+..+.|+|||++...+.+.++.|...|+++.++....+++.++ ..|.|.+..+.++.....|... ...
T Consensus 89 s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs--~gGdiiih~~~t~~~tt~f~~~sgqs 166 (673)
T KOG4378|consen 89 SQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVS--DGGDIIIHGTKTKQKTTTFTIDSGQS 166 (673)
T ss_pred hcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEec--cCCcEEEEecccCccccceecCCCCe
Confidence 5668999999999999999997777888999999999999999988887765 6899999999998887777644 345
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCC-CEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 310 VSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 310 v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
|.-+.|+|..+ +|.+++.+|.|.+||+....+...+ .|..+...++|+|.. .+|++.+.|..|.+||.+.....
T Consensus 167 vRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~-- 244 (673)
T KOG4378|consen 167 VRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAST-- 244 (673)
T ss_pred EEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccc--
Confidence 66899999877 6778899999999999988877666 455566779999954 56788899999999999974321
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-ceeEEeeccccCCCCCEEEEEecCC
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
..+ ....+.+.++|+++|.+|+.|+..|.|..||++.. .++..+..|... |++++|-|..
T Consensus 245 ~~l----~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~s---Vt~vafq~s~ 305 (673)
T KOG4378|consen 245 DRL----TYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDAS---VTRVAFQPSP 305 (673)
T ss_pred cee----eecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccc---eeEEEeeecc
Confidence 122 23446779999999999999999999999999865 456666665444 9999998864
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=169.15 Aligned_cols=251 Identities=16% Similarity=0.252 Sum_probs=189.0
Q ss_pred ccCCcEEEEEEcCC----CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 219 ENTDKINSLDYSSD----GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 219 ~h~~~I~~l~~spd----~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
.|......++|+-| ..++|.|+.-|.|+|.|+.++++...+.+|...|+.+.|.|+...+++.. +.|.+|++||+
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~-SkD~svRlwnI 165 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSA-SKDHSVRLWNI 165 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEe-cCCceEEEEec
Confidence 47888888999764 35899999999999999999999999999999999999999987776654 68999999999
Q ss_pred CCCeeeEEe---cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC------C---C-----eeEEEE-
Q psy6127 295 HDNKYVRYF---PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS------G---N-----KPIAAY- 356 (515)
Q Consensus 295 ~~~~~~~~~---~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------~---~-----~~~~~~- 356 (515)
++..++..+ .+|.+.|.++.|+++|.+|++++.|.++++|++...+....+... . + ..--.|
T Consensus 166 ~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fs 245 (385)
T KOG1034|consen 166 QTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFS 245 (385)
T ss_pred cCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccc
Confidence 999999887 579999999999999999999999999999999854322111000 0 0 000111
Q ss_pred ----CC--------CCCEEEEEECCCcEEEEEeecCCCC------C---ceeeecCCCCCcCe--EEEEEcCCCCEEEEE
Q psy6127 357 ----DP--------EGLAFAIGVNSDSIKLYDVRSYDKG------P---FASFKCPGERGCEW--TGLKFSPDGKLILVS 413 (515)
Q Consensus 357 ----s~--------~~~~l~~g~~dg~i~i~d~~~~~~~------~---~~~~~~~~~~~~~i--~~l~~sp~~~~l~~~ 413 (515)
+. -|+++++-+.++.|..|.....+.. + ...+.......+.+ ...+|+|-++.||.|
T Consensus 246 t~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~g 325 (385)
T KOG1034|consen 246 TTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALG 325 (385)
T ss_pred ccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhc
Confidence 11 2577888888999999987322111 0 01111112223333 345667888999999
Q ss_pred ECCCcEEEEECCCCcee-EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 414 TNGSIIRLFDAFNGNCV-QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 414 s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
...|.+.+||++...+. .+-..+......|...+|+.||.+|+...+|++|.-||.-
T Consensus 326 nq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 326 NQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred cCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 99999999999887653 2222334455668999999999999999999999999863
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=179.96 Aligned_cols=239 Identities=20% Similarity=0.267 Sum_probs=184.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe---ee------------------eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGT---SK------------------NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~---~~------------------~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
-|+|+|.|+.|..|.|||+.-.. +. ..-.+|+..|..++|+..-..+ +++|+.|.+|+
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nV-LaSgsaD~TV~ 269 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNV-LASGSADKTVK 269 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccccee-EEecCCCceEE
Confidence 36899999999999999975211 00 1123688888899998876554 56668999999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCC-CeEEEEecCCCeeEEEECCCC-CEEEEEE
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQP-NNVGMIQLSGNKPIAAYDPEG-LAFAIGV 367 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~s~~~-~~l~~g~ 367 (515)
+||+.++++..++..|.+.|.++.|+|.. ..|++|+.|++|.+.|.|.. ..-..+...+.+..++|.|.. ..+++++
T Consensus 270 lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~t 349 (463)
T KOG0270|consen 270 LWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVST 349 (463)
T ss_pred EEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEec
Confidence 99999999999999999999999999975 48999999999999999953 333455777789999999965 5677888
Q ss_pred CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEE
Q psy6127 368 NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 446 (515)
.||+++-+|+|...+ .......|..+|.++++++.- ..+++++.|+.+++|++........ ..+.-.-+...|.
T Consensus 350 ddG~v~~~D~R~~~~----~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v-~~~~~~~~rl~c~ 424 (463)
T KOG0270|consen 350 DDGTVYYFDIRNPGK----PVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSV-KEHSFKLGRLHCF 424 (463)
T ss_pred CCceEEeeecCCCCC----ceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccc-ccccccccceeec
Confidence 999999999998752 444456888899999999854 4678899999999999865443211 1121122225677
Q ss_pred EEecCC-CEEEEEeCCCcEEEEECCCCeEEE
Q psy6127 447 TFTPDS-QFVASGSTDGQVHIWNAERGYKVC 476 (515)
Q Consensus 447 ~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~~ 476 (515)
++.|+- -+++.|+..+.++|||+.+...+.
T Consensus 425 ~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 425 ALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred ccCCCcceEEEecCccceEEEeecccChhHH
Confidence 777765 467788888899999998876554
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=182.61 Aligned_cols=286 Identities=12% Similarity=0.170 Sum_probs=219.5
Q ss_pred ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCC--EEEEEeCCCeE
Q psy6127 168 LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGS--LLISCSDDDQI 245 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~--~lasgs~dg~i 245 (515)
+.||...|.+++..+... ...++++|+++++|. +.+++|++++.- .+.|.|++|+|.+. .||++-.+. +
T Consensus 396 yrGHtg~Vr~iSvdp~G~-----wlasGsdDGtvriWE--i~TgRcvr~~~~-d~~I~~vaw~P~~~~~vLAvA~~~~-~ 466 (733)
T KOG0650|consen 396 YRGHTGLVRSISVDPSGE-----WLASGSDDGTVRIWE--IATGRCVRTVQF-DSEIRSVAWNPLSDLCVLAVAVGEC-V 466 (733)
T ss_pred EeccCCeEEEEEecCCcc-----eeeecCCCCcEEEEE--eecceEEEEEee-cceeEEEEecCCCCceeEEEEecCc-e
Confidence 467877788888887654 335899999999999 999999998764 45899999999664 455544333 4
Q ss_pred EEEECCCCe-------------------------------------eeeEecCCCCceeEEEEecCCCeEEEEEe-eCCC
Q psy6127 246 IIYDCEQGT-------------------------------------SKNTINSKKYGVDLIKFTHSKTTAIHAST-KVDA 287 (515)
Q Consensus 246 ~iwd~~~~~-------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~-~~d~ 287 (515)
.|-+..-|. -++..-.|...|..+.|+..|++++++.+ +...
T Consensus 467 ~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~ 546 (733)
T KOG0650|consen 467 LIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNK 546 (733)
T ss_pred EEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcc
Confidence 444322110 01223346778999999999999998864 2356
Q ss_pred eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEE
Q psy6127 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g 366 (515)
.|.|.++...+...-|....+.|.++.|+|...+|+.++. ..|++||+...+.++.+ .....+..++++|.|..++.|
T Consensus 547 ~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~g 625 (733)
T KOG0650|consen 547 SVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILG 625 (733)
T ss_pred eEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEe
Confidence 7999999887777777667788999999999988888765 78999999887766655 333447889999999999999
Q ss_pred ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC------CCCc---eeEEeeccc
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA------FNGN---CVQSLSGVL 437 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~------~~~~---~~~~~~~~~ 437 (515)
+.|+.+..||+.-.. ...+....|...+++++|++.-.++++|+.||++.|+-- -... +++.+.+|.
T Consensus 626 s~d~k~~WfDldlss----kPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~ 701 (733)
T KOG0650|consen 626 SYDKKMCWFDLDLSS----KPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHE 701 (733)
T ss_pred cCCCeeEEEEcccCc----chhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCce
Confidence 999999999998654 245556688889999999999999999999999998842 2222 334455543
Q ss_pred cC-CCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 438 NN-NASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 438 ~~-~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
.. ...|..+.|+|...+|++++.||+|++|
T Consensus 702 ~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 702 KTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eecccceEeecccCCCceEEecCCCceEEee
Confidence 32 2237888999999999999999999998
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.8e-21 Score=172.09 Aligned_cols=243 Identities=16% Similarity=0.233 Sum_probs=186.7
Q ss_pred ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC----------------CeeeEEecCCCCCeEEEEEcCCCC-E
Q psy6127 259 INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD----------------NKYVRYFPGHVRKVSSLNLSPVDD-S 321 (515)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~----------------~~~~~~~~~h~~~v~~l~~~~~~~-~ 321 (515)
...|.+.++.+.-.+-++..++++-+..|.|+|||+.. .+++.++.+|...=..++|+|-.. .
T Consensus 147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~ 226 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR 226 (440)
T ss_pred ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence 34677888888888888888888878899999999742 356788899999999999999432 5
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEE----EecCCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGM----IQLSGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
|++|..-+.|++|...++..... ..+...+..++|||. ...|++|+.||+|+|||+|...+...... ..|.+
T Consensus 227 LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~---kAh~s 303 (440)
T KOG0302|consen 227 LLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST---KAHNS 303 (440)
T ss_pred cccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe---eccCC
Confidence 88888889999999988765432 245566888999995 56789999999999999999755433333 67888
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCC---ceeEEeeccccCCCCCEEEEEecC-CCEEEEEeCCCcEEEEECCCC
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNG---NCVQSLSGVLNNNASPLEATFTPD-SQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~---~~~~~~~~~~~~~~~i~~~~~sp~-g~~l~sgs~dg~I~iwd~~~~ 472 (515)
.|+.|.|+.+..+|++|+.||+++|||+++. +++..+.. |..+|+++.|+|. ...+++++.|..|.+||+..-
T Consensus 304 DVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~---Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 304 DVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKY---HKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred ceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEe---ccCCeeEEEeccccCceEEeccCCCcEEEEEeecc
Confidence 9999999998889999999999999999864 45566665 4555999999995 467888889999999998531
Q ss_pred -------------------eEEEEEcCCCCCCeEEEEECCCC-CEEEEeeCC-EEEEc
Q psy6127 473 -------------------YKVCVLDGDHPSAVQSLQFNPKY-HMLASACSN-MAFWI 509 (515)
Q Consensus 473 -------------------~~~~~~~~~h~~~V~~l~~sp~~-~~las~~~d-v~iW~ 509 (515)
+++.... -...+..+.|++.- -++++.+.+ +.||.
T Consensus 381 ~D~ee~~~~a~~~L~dlPpQLLFVHq--GQke~KevhWH~QiPG~lvsTa~dGfnVfk 436 (440)
T KOG0302|consen 381 ADEEEIDQEAAEGLQDLPPQLLFVHQ--GQKEVKEVHWHRQIPGLLVSTAIDGFNVFK 436 (440)
T ss_pred CChhhhccccccchhcCCceeEEEec--chhHhhhheeccCCCCeEEEecccceeEEE
Confidence 1222222 23468899999943 355555544 77764
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-20 Score=167.83 Aligned_cols=298 Identities=16% Similarity=0.257 Sum_probs=207.7
Q ss_pred eEEEEEEeeccccceeeeeeeCCCCcEEEEccce-------eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENL-------VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQII 246 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~-------~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~ 246 (515)
.++.+.|.+.... ..+++++|.-|++|.-. ....+.+..+..|...|+++.|+|+|..||+|+++|.|.
T Consensus 15 pv~s~dfq~n~~~----~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~ 90 (434)
T KOG1009|consen 15 PVYSVDFQKNSLN----KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVF 90 (434)
T ss_pred ceEEEEeccCccc----ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEE
Confidence 3555566554432 23488889999999611 123345678999999999999999999999999999999
Q ss_pred EEECC--------C--------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe
Q psy6127 247 IYDCE--------Q--------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV 310 (515)
Q Consensus 247 iwd~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v 310 (515)
+|... + ....+.+.+|...+..++|+|++..+++++ .|+.+++||+..|.....+..|...+
T Consensus 91 lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s--~dns~~l~Dv~~G~l~~~~~dh~~yv 168 (434)
T KOG1009|consen 91 LWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGS--VDNSVRLWDVHAGQLLAILDDHEHYV 168 (434)
T ss_pred EEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeee--ccceEEEEEeccceeEeecccccccc
Confidence 99765 2 233456788999999999999998887765 69999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec
Q psy6127 311 SSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC 390 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~ 390 (515)
..++|.|-++++++-+.|...+.+++...+.+....... ...-++.+. .....++|.=++.
T Consensus 169 qgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~-m~~~~~~~~--------e~~s~rLfhDeTl---------- 229 (434)
T KOG1009|consen 169 QGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDI-MPAKAFNER--------EGKSTRLFHDETL---------- 229 (434)
T ss_pred ceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeE-eeecccCCC--------CcceeeeeecCch----------
Confidence 999999999999999999977777776554444332210 111111111 1122333322221
Q ss_pred CCCCCcCeEEEEEcCCCCEEEEEEC----CC-----cEEEEECCCC-ceeEEeeccccCCCCCEEEEEec----------
Q psy6127 391 PGERGCEWTGLKFSPDGKLILVSTN----GS-----IIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTP---------- 450 (515)
Q Consensus 391 ~~~~~~~i~~l~~sp~~~~l~~~s~----dg-----~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp---------- 450 (515)
..-...++|+|+|..+++.+. ++ ..++|+-... ++...+.. ...+...+.|+|
T Consensus 230 ----ksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~---~~k~~lavr~~pVy~elrp~~~ 302 (434)
T KOG1009|consen 230 ----KSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPS---PKKPALAVRFSPVYYELRPLSS 302 (434)
T ss_pred ----hhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCC---CCcceEEEEeeeeEEEeccccc
Confidence 122347899999998887542 22 2345543221 12222222 122233444443
Q ss_pred --------CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 451 --------DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 451 --------~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
-+-.+|.++ .+.|+|||.++.+++....+.|-..|++++|++||.+++..+-|
T Consensus 303 ~~~~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~D 363 (434)
T KOG1009|consen 303 EKFLFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTD 363 (434)
T ss_pred cccccccccceEEEEee-cceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccC
Confidence 223445554 55699999999999999988899999999999999999988866
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-20 Score=169.02 Aligned_cols=293 Identities=20% Similarity=0.311 Sum_probs=217.9
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------CeeeeEec-CCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ------GTSKNTIN-SKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
.+.+.+|.+.|+++.|+.++++||+|+.|..+++|+++. .+++.... .|...|.|++|......++. |..+
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~S--G~~~ 126 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYS--GERW 126 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEec--CCCc
Confidence 456789999999999999999999999999999999863 34444443 34588999999987766554 4589
Q ss_pred CeEEEEECCCCeeeEEecC--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-eEEEE---ecCCCeeEEEECCC-
Q psy6127 287 ATLRYLSLHDNKYVRYFPG--HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN-NVGMI---QLSGNKPIAAYDPE- 359 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~---~~~~~~~~~~~s~~- 359 (515)
++|...|+++.+.+..+.. ..+.|..+..+|..+.|++.+.++.|.+||.+... ....+ ........+.|+|.
T Consensus 127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~ 206 (609)
T KOG4227|consen 127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET 206 (609)
T ss_pred ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCC
Confidence 9999999999998877752 23589999999999999999999999999998765 22222 33445677889995
Q ss_pred CCEEEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
..+|++.+..+-+-+||.+.......+.-.. .......+.++.|+|+|+.+++--....-.+||+.+..+...-..|.
T Consensus 207 P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N 286 (609)
T KOG4227|consen 207 PALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHN 286 (609)
T ss_pred ceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCC
Confidence 5677888889999999999765332221111 11223345689999999999887766667788887755432222221
Q ss_pred c----CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC-----------------------eEEEEEcCCCCCCeEEEE
Q psy6127 438 N----NNASPLEATFTPDSQFVASGSTDGQVHIWNAERG-----------------------YKVCVLDGDHPSAVQSLQ 490 (515)
Q Consensus 438 ~----~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~-----------------------~~~~~~~~~h~~~V~~l~ 490 (515)
. ....+.+++|..|.. +++|+.+=.|++|.+... +.+..+.+ |..-++.+.
T Consensus 287 ~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrG-HRSv~NQVR 364 (609)
T KOG4227|consen 287 PNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRG-HRSVPNQVR 364 (609)
T ss_pred CCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEec-cccccccee
Confidence 1 122366788876654 899999989999987531 23455667 999999999
Q ss_pred ECCCCCEEEEee--CCEEEEcC
Q psy6127 491 FNPKYHMLASAC--SNMAFWIP 510 (515)
Q Consensus 491 ~sp~~~~las~~--~dv~iW~~ 510 (515)
|+|...+|++.+ ..++||..
T Consensus 365 F~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 365 FSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred ecCCcceEeccchhhheecccc
Confidence 999988888877 33999964
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-20 Score=179.61 Aligned_cols=268 Identities=15% Similarity=0.319 Sum_probs=212.5
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~ 302 (515)
.|..++|-|||..|+.+.. ..+.+||...|..+.++++|.+.|.+++|+.+|+.++.+ +.|..|.+|+..-...++
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG--~aDK~VI~W~~klEG~Lk- 89 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASG--SADKSVIIWTSKLEGILK- 89 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccC--CCceeEEEecccccceee-
Confidence 8999999999998887754 579999999999999999999999999999999976644 579999999865443333
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCC
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDK 382 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~ 382 (515)
+ .|.+.|.|+.|+|-...|++++- ...-+|....... ........+.+++|..||.+++.|-.+|+|.+-+-..
T Consensus 90 Y-SH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V-~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~g--- 163 (1081)
T KOG1538|consen 90 Y-SHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKSV-SKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNG--- 163 (1081)
T ss_pred e-ccCCeeeEeecCchHHHhhhcch-hhccccChhhhhH-HhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCC---
Confidence 3 49999999999999999998876 3456887765432 2333444578899999999999999999999875433
Q ss_pred CCceeeecCCCCCcCeEEEEEcCCC-----CEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 383 GPFASFKCPGERGCEWTGLKFSPDG-----KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~l~~sp~~-----~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
.+...+..+++.+++|.+++|+|.. ..+++.....++.+|.+. |+.+..-. .-.....|+.+.|+|.++..
T Consensus 164 Eek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r---~L~FdP~CisYf~NGEy~Li 239 (1081)
T KOG1538|consen 164 EEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDR---ALNFDPCCISYFTNGEYILL 239 (1081)
T ss_pred CcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccc---cCCCCchhheeccCCcEEEE
Confidence 2334556678889999999999963 467777778888888764 44332211 12223678999999999999
Q ss_pred EeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEE
Q psy6127 458 GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMA 506 (515)
Q Consensus 458 gs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~ 506 (515)
|+.|+.+.+|-. .|-.+.++-. ....|+.++..|+++.++.|+.|+.
T Consensus 240 GGsdk~L~~fTR-~GvrLGTvg~-~D~WIWtV~~~PNsQ~v~~GCqDGT 286 (1081)
T KOG1538|consen 240 GGSDKQLSLFTR-DGVRLGTVGE-QDSWIWTVQAKPNSQYVVVGCQDGT 286 (1081)
T ss_pred ccCCCceEEEee-cCeEEeeccc-cceeEEEEEEccCCceEEEEEccCe
Confidence 999999999974 5778887765 7889999999999999999986643
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-19 Score=160.17 Aligned_cols=289 Identities=15% Similarity=0.225 Sum_probs=197.2
Q ss_pred ccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEee--eeccc--cCCcEEEEEEcCCCCEEEEE-e
Q psy6127 166 SSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVA--KVFRE--NTDKINSLDYSSDGSLLISC-S 240 (515)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~--~~~~~--h~~~I~~l~~spd~~~lasg-s 240 (515)
.++++|...+..+.|...... |+ +.++|+.|++|+ ++.+... +.++. .-+.-+.+.|+||-+-++.. -
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~----la-t~~~Dr~Ir~w~--~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~ 152 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKK----LA-TISGDRSIRLWD--VRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVK 152 (420)
T ss_pred hhhhccCCceeeeEEcCCCce----eE-EEeCCceEEEEe--cchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEc
Confidence 357888776666666544321 44 788899999999 6664321 11110 12356889999998755544 4
Q ss_pred CCCeEEEEECCC---CeeeeEe---------cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC
Q psy6127 241 DDDQIIIYDCEQ---GTSKNTI---------NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR 308 (515)
Q Consensus 241 ~dg~i~iwd~~~---~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~ 308 (515)
...++++|.... |.....+ +.|.-.+..+-....+.+++ +++.|..|.+|+++ |+.+........
T Consensus 153 ~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~im--sas~dt~i~lw~lk-Gq~L~~idtnq~ 229 (420)
T KOG2096|consen 153 RGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIM--SASLDTKICLWDLK-GQLLQSIDTNQS 229 (420)
T ss_pred cCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEE--EecCCCcEEEEecC-Cceeeeeccccc
Confidence 556899997653 2211111 12334455554444454444 44589999999998 888888877777
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcC---CCC---eEEEE---ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 309 KVSSLNLSPVDDSFISGSYDKTVRVWDLR---QPN---NVGMI---QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s~dg~i~iwd~~---~~~---~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
.-+..+.+|+|+++++++..-.|++|.+- .|+ ..+.+ .+...+..++|+++...+++.+.||++++||.+-
T Consensus 230 ~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 230 SNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred cccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc
Confidence 77889999999999999999999999863 221 12222 4455688999999999999999999999999864
Q ss_pred CCC--C---Cceeeec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 380 YDK--G---PFASFKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 380 ~~~--~---~~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
.-. + ..+.... .....+....++++|+|+.|+.+. ...+++|..++|+....++.. +...|.+++|+++|+
T Consensus 310 rY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~--h~~~Is~is~~~~g~ 386 (420)
T KOG2096|consen 310 RYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDI--HSTTISSISYSSDGK 386 (420)
T ss_pred eEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHh--hcCceeeEEecCCCc
Confidence 210 0 0111101 112223334899999999887654 457999999999877666543 444599999999999
Q ss_pred EEEEEeCCCcEEEEE
Q psy6127 454 FVASGSTDGQVHIWN 468 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd 468 (515)
++++++ |..+++..
T Consensus 387 ~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 387 YIATCG-DRYVRVIR 400 (420)
T ss_pred EEeeec-ceeeeeec
Confidence 999986 66788876
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-20 Score=168.95 Aligned_cols=232 Identities=16% Similarity=0.248 Sum_probs=177.7
Q ss_pred eeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-------eeeeEecCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 215 KVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQG-------TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
-.+.||+++|..++|+| +...+||||.|.+|.||.+..+ +++..+.+|...|..++|+|....+++.+ +.|
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsa-g~D 153 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSA-GSD 153 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhc-cCC
Confidence 45789999999999999 6678999999999999998754 45677889999999999999887766555 469
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCC-CeeEEEECCCCCEEE
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSG-NKPIAAYDPEGLAFA 364 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~-~~~~~~~s~~~~~l~ 364 (515)
.+|.+||+.+|+.+.++. |.+.|.++.|+.||.+|++++.|..|+|||.++++.+..-. +.+ ...-+.|-.+|..+.
T Consensus 154 n~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~t 232 (472)
T KOG0303|consen 154 NTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFT 232 (472)
T ss_pred ceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceee
Confidence 999999999999998887 99999999999999999999999999999999999988763 222 344567778888666
Q ss_pred EEE---CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCC
Q psy6127 365 IGV---NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 365 ~g~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
+|. .+..+.+||..+.+.. . .+... .....|.---|.||.+.++.++ .|+.|+.|.+.+..+...+.......
T Consensus 233 TGfsr~seRq~aLwdp~nl~eP-~-~~~el-DtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~ 309 (472)
T KOG0303|consen 233 TGFSRMSERQIALWDPNNLEEP-I-ALQEL-DTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSK 309 (472)
T ss_pred eccccccccceeccCcccccCc-c-eeEEe-ccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccC
Confidence 664 4778999998875533 1 12212 2334455566788888877655 79999999987765432222222223
Q ss_pred CCCEEEEEecC
Q psy6127 441 ASPLEATFTPD 451 (515)
Q Consensus 441 ~~i~~~~~sp~ 451 (515)
.+-..+.|-|.
T Consensus 310 epQRG~g~mPK 320 (472)
T KOG0303|consen 310 EPQRGMGFMPK 320 (472)
T ss_pred Ccccccccccc
Confidence 33455666664
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-18 Score=170.22 Aligned_cols=289 Identities=29% Similarity=0.519 Sum_probs=227.2
Q ss_pred eccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-eeeEecCCCC-ceeEEEE-ecCCCeEEEEEeeCCCeEEEE
Q psy6127 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-SKNTINSKKY-GVDLIKF-THSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-~~~~~~~~~~-~v~~~~~-~~~~~~l~~~s~~~d~~v~vw 292 (515)
.+.+|...+.++.|.+.+..++.++.|+.+.+|+...+. ....+..... .+..+.+ .+++...+...+..|+.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 567899999999999999999999999999999998876 6666766443 6777777 777774555544569999999
Q ss_pred ECCC-CeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCC-EEEEEEC
Q psy6127 293 SLHD-NKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGL-AFAIGVN 368 (515)
Q Consensus 293 d~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~-~l~~g~~ 368 (515)
|... ......+..|...|..++|+|++..+++++. |+.+++|++..+.....+. +...+.+++|+|++. .+++++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 219 (466)
T COG2319 140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSS 219 (466)
T ss_pred EecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecC
Confidence 9998 7888889999999999999999998888886 9999999999987777775 466799999999998 5555589
Q ss_pred CCcEEEEEeecCCCCCceeee-cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce-eEEeeccccCCCCCEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFK-CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC-VQSLSGVLNNNASPLEA 446 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~-~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~ 446 (515)
|+.+++||..... ... ....|.... ...|+|++.++++++.|+.+++|+...... ...+. .+...+.++
T Consensus 220 d~~i~~wd~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~~~~v~~~ 290 (466)
T COG2319 220 DGTIRLWDLSTGK-----LLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLS---GHSSSVLSV 290 (466)
T ss_pred CCcEEEEECCCCc-----EEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEe---cCCccEEEE
Confidence 9999999877432 222 233444443 228999998999999999999999987765 44442 235568999
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc-CCCCCCeEEEEECCCCCEEEEe-eC--CEEEEcCCCC
Q psy6127 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD-GDHPSAVQSLQFNPKYHMLASA-CS--NMAFWIPTLS 513 (515)
Q Consensus 447 ~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~las~-~~--dv~iW~~~~~ 513 (515)
.|+|++..+++++.|+.+.+|+..+........ ..|...+..+.|.+++..++.+ .. .+.+|+....
T Consensus 291 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 361 (466)
T COG2319 291 AFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG 361 (466)
T ss_pred EECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCC
Confidence 999988888889989999999998887776665 2287789999994342455555 33 3777887643
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-21 Score=197.63 Aligned_cols=279 Identities=16% Similarity=0.285 Sum_probs=205.4
Q ss_pred EEEEcCCCC-EEEEE----------eCCCeEEEEECCCCe------eeeEecCCCCceeEEEEecCCCeE--EEEEeeCC
Q psy6127 226 SLDYSSDGS-LLISC----------SDDDQIIIYDCEQGT------SKNTINSKKYGVDLIKFTHSKTTA--IHASTKVD 286 (515)
Q Consensus 226 ~l~~spd~~-~lasg----------s~dg~i~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l--~~~s~~~d 286 (515)
.++|+|++. ++|+| +.+.++-||.+.... .+..+. .....+.++|.+.+... ++++|..|
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~ed 89 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLED 89 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccC
Confidence 467888775 55544 334556666554222 222222 23567889999887763 45556799
Q ss_pred CeEEEEECCCC------eeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEE---ecCCCeeEEEE
Q psy6127 287 ATLRYLSLHDN------KYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMI---QLSGNKPIAAY 356 (515)
Q Consensus 287 ~~v~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~ 356 (515)
|.|.+||...- ..+.++..|++.|..+.|++... .|++|+.||.|.|||+...+.-... ...+.+.+++|
T Consensus 90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsW 169 (1049)
T KOG0307|consen 90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSW 169 (1049)
T ss_pred CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEecc
Confidence 99999997652 23566788999999999999866 9999999999999999986554443 23456889999
Q ss_pred CCC-CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC-EEEEEECCC---cEEEEECCCC-cee
Q psy6127 357 DPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK-LILVSTNGS---IIRLFDAFNG-NCV 430 (515)
Q Consensus 357 s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~s~dg---~i~iwd~~~~-~~~ 430 (515)
+.. .+.|++++.+|.+.|||++..+ ++..+.. ......+..++|+|+.. .+++++.|. .|.+||++.. .++
T Consensus 170 NrkvqhILAS~s~sg~~~iWDlr~~~--pii~ls~-~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~ 246 (1049)
T KOG0307|consen 170 NRKVSHILASGSPSGRAVIWDLRKKK--PIIKLSD-TPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPL 246 (1049)
T ss_pred chhhhHHhhccCCCCCceeccccCCC--ccccccc-CCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCch
Confidence 874 4668889999999999999853 2222222 12225678999999764 566666543 6999998865 455
Q ss_pred EEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee--CCEE
Q psy6127 431 QSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC--SNMA 506 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~--~dv~ 506 (515)
+.+.+|. ..|.++.|++.+ .+|++++.|+.|.+|+.++++.+..+.. ..+.+..+.|+|... .++.++ +.+.
T Consensus 247 k~~~~H~---~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~-~~nW~fdv~w~pr~P~~~A~asfdgkI~ 322 (1049)
T KOG0307|consen 247 KILEGHQ---RGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA-QGNWCFDVQWCPRNPSVMAAASFDGKIS 322 (1049)
T ss_pred hhhcccc---cceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC-CCcceeeeeecCCCcchhhhheecccee
Confidence 6665544 449999999976 8999999999999999999999999987 889999999999665 555555 5688
Q ss_pred EEcCCC
Q psy6127 507 FWIPTL 512 (515)
Q Consensus 507 iW~~~~ 512 (515)
|+.+..
T Consensus 323 I~sl~~ 328 (1049)
T KOG0307|consen 323 IYSLQG 328 (1049)
T ss_pred eeeeec
Confidence 887653
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=179.89 Aligned_cols=266 Identities=18% Similarity=0.257 Sum_probs=198.5
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------CeeeeEecCCCCceeEEEEecCCCeEEE
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ--------GTSKNTINSKKYGVDLIKFTHSKTTAIH 280 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 280 (515)
+.|.+..+++.|.+.|+.++|.|....|++|+.||++++|+++. -+++.++.+|.++|.|+++.+.+...+.
T Consensus 282 k~w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ys 361 (577)
T KOG0642|consen 282 KKWNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYS 361 (577)
T ss_pred eecceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEe
Confidence 34566668999999999999999999999999999999999932 2567889999999999999999998876
Q ss_pred EEeeCCCeEEEEECCCC----------eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE---ec
Q psy6127 281 ASTKVDATLRYLSLHDN----------KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI---QL 347 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~----------~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~ 347 (515)
++ .||+|+.|++... .....+.||.+.|+.+++++....|++++.||+++.|+...... .++ .-
T Consensus 362 gg--~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e 438 (577)
T KOG0642|consen 362 GG--IDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKE 438 (577)
T ss_pred ec--cCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccc
Confidence 65 7999999965421 12356789999999999999999999999999999999877666 223 12
Q ss_pred CCCeeEEEECCCC-CEEEEEECCCcEEEEEeecCCCCCceeeecC--CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 348 SGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPFASFKCP--GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 348 ~~~~~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
.+-..++.+-... ...++...-+.-.++++.......+...... ......+..+.++|.+...+++..|+.|+++|.
T Consensus 439 ~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn 518 (577)
T KOG0642|consen 439 HGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDN 518 (577)
T ss_pred cCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccc
Confidence 2223344443322 1222222223333333333221111111100 011235668899999999999999999999999
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
.+++.+.....|... ++++++.|+|.+|++++.||.+++|.+....++.....
T Consensus 519 ~~~~~l~s~~a~~~s---vtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~ 571 (577)
T KOG0642|consen 519 KTGKILHSMVAHKDS---VTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTA 571 (577)
T ss_pred cccccchheeeccce---ecceeecCCCceEEeecCCceeehhhccchheeecccc
Confidence 999998888776554 89999999999999999999999999988777765554
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=162.34 Aligned_cols=290 Identities=13% Similarity=0.148 Sum_probs=198.9
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec-CCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN-SKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+..++++|.+.|+++.|..+++ |.+|..-|.|++|++.+......++ .+...|+.+.-.|++. +.+- +.|..+.
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~-l~tq--gRd~~L~ 80 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDS-LDTQ--GRDPLLI 80 (323)
T ss_pred CCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcc-hhhc--CCCceEE
Confidence 45567889999999999998775 8899999999999999998888888 6678899998888743 3333 4899999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcC-----CCC----EEEEEeCCCc-EEEEEcCCCCeEEEEe-----cCCCeeEEE
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSP-----VDD----SFISGSYDKT-VRVWDLRQPNNVGMIQ-----LSGNKPIAA 355 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~~----~l~s~s~dg~-i~iwd~~~~~~~~~~~-----~~~~~~~~~ 355 (515)
+|++.-+..+.. |.-.++++-|.+ .++ .++.-++... +.+-|......+.... ..+.+.+..
T Consensus 81 lw~ia~s~~i~i---~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~ 157 (323)
T KOG0322|consen 81 LWTIAYSAFISI---HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQD 157 (323)
T ss_pred EEEccCcceEEE---eeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeee
Confidence 999987655433 333444444433 111 1111111100 1122222211121111 112244444
Q ss_pred ECC-CCC--EEEEEECCCcEEEEEeecCCCCC-----ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy6127 356 YDP-EGL--AFAIGVNSDSIKLYDVRSYDKGP-----FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 356 ~s~-~~~--~l~~g~~dg~i~i~d~~~~~~~~-----~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~ 427 (515)
+.. ++. ++++|.++|.+.+||+.++.... .........|..++.++.+.+.-..=++|+.+..+..|++...
T Consensus 158 ~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s 237 (323)
T KOG0322|consen 158 KDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHS 237 (323)
T ss_pred ccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccc
Confidence 322 232 46778899999999999863211 0111123467789999999887666678888888889987533
Q ss_pred --ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC-
Q psy6127 428 --NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN- 504 (515)
Q Consensus 428 --~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d- 504 (515)
.+..... +.-....+..+..-||++.+|+++.|+.||||+.++..++..+.. |.+.|++++|+|+..++|+++.|
T Consensus 238 ~gslq~~~e-~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLky-Hsagvn~vAfspd~~lmAaaskD~ 315 (323)
T KOG0322|consen 238 TGSLQIRKE-ITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKY-HSAGVNAVAFSPDCELMAAASKDA 315 (323)
T ss_pred cCcccccce-EEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhh-hhcceeEEEeCCCCchhhhccCCc
Confidence 2211111 111122378899999999999999999999999999999999998 99999999999999999999987
Q ss_pred -EEEEcC
Q psy6127 505 -MAFWIP 510 (515)
Q Consensus 505 -v~iW~~ 510 (515)
+.+|++
T Consensus 316 rISLWkL 322 (323)
T KOG0322|consen 316 RISLWKL 322 (323)
T ss_pred eEEeeec
Confidence 888975
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-17 Score=162.30 Aligned_cols=269 Identities=10% Similarity=0.163 Sum_probs=180.5
Q ss_pred CCCcEEEEccceee---eeEeeeeccccCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECC-CCee--eeEecCCCCceeE
Q psy6127 196 SSRTITKCSENLVR---SYRVAKVFRENTDKINSLDYSSDGSLLISCS-DDDQIIIYDCE-QGTS--KNTINSKKYGVDL 268 (515)
Q Consensus 196 ~~~~~i~~wd~~~~---~~~~~~~~~~h~~~I~~l~~spd~~~lasgs-~dg~i~iwd~~-~~~~--~~~~~~~~~~v~~ 268 (515)
..++.|.+|+ +. ..+.++++.. .+....++++|++++|++++ .++.|.+|++. +++. ..... .......
T Consensus 9 ~~~~~I~~~~--~~~~g~l~~~~~~~~-~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~ 84 (330)
T PRK11028 9 PESQQIHVWN--LNHEGALTLLQVVDV-PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTH 84 (330)
T ss_pred CCCCCEEEEE--ECCCCceeeeeEEec-CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceE
Confidence 4456678887 42 2345555543 45677899999999987765 57889999986 3332 22222 2235678
Q ss_pred EEEecCCCeEEEEEeeCCCeEEEEECCCCe----eeEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEE
Q psy6127 269 IKFTHSKTTAIHASTKVDATLRYLSLHDNK----YVRYFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 269 ~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~ 343 (515)
++|+|+++.++++. ..++.|.+|++++.. .+..+. +......++++|+++++++++ .++.|.+||+++...+.
T Consensus 85 i~~~~~g~~l~v~~-~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~ 162 (330)
T PRK11028 85 ISTDHQGRFLFSAS-YNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLV 162 (330)
T ss_pred EEECCCCCEEEEEE-cCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccc
Confidence 99999999888876 358999999997432 223332 334567889999999876554 56999999998643221
Q ss_pred -------EEecCCCeeEEEECCCCCEEEEEEC-CCcEEEEEeecCCC--CCceeeecC-C--CCCcCeEEEEEcCCCCEE
Q psy6127 344 -------MIQLSGNKPIAAYDPEGLAFAIGVN-SDSIKLYDVRSYDK--GPFASFKCP-G--ERGCEWTGLKFSPDGKLI 410 (515)
Q Consensus 344 -------~~~~~~~~~~~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~--~~~~~~~~~-~--~~~~~i~~l~~sp~~~~l 410 (515)
..........+.|+|+|++++++.. ++.|.+|++..... .....+... . ........+.++|+++++
T Consensus 163 ~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~l 242 (330)
T PRK11028 163 AQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHL 242 (330)
T ss_pred ccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEE
Confidence 1223344678999999999988876 89999999984211 111111111 1 111223468999999999
Q ss_pred EEEEC-CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC-CCcEEEEECC
Q psy6127 411 LVSTN-GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST-DGQVHIWNAE 470 (515)
Q Consensus 411 ~~~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~-dg~I~iwd~~ 470 (515)
+++.. ++.|.+|++........+..+......+..+.++|+|++|+++.. +++|.+|+++
T Consensus 243 yv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 243 YACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 98864 789999998654322222222222223678999999999998775 8899999874
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.3e-18 Score=164.38 Aligned_cols=269 Identities=13% Similarity=0.177 Sum_probs=181.4
Q ss_pred EEEeCCCeEEEEECCC-Ce--eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC-Cee--eEEecCCCCCe
Q psy6127 237 ISCSDDDQIIIYDCEQ-GT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD-NKY--VRYFPGHVRKV 310 (515)
Q Consensus 237 asgs~dg~i~iwd~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-~~~--~~~~~~h~~~v 310 (515)
++...++.|.+|++.+ ++ .+..+.. .+....++++|+++.+++++. .++.|.+|+++. ++. +.... ..+..
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~~-~~~~~~l~~spd~~~lyv~~~-~~~~i~~~~~~~~g~l~~~~~~~-~~~~p 82 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVDV-PGQVQPMVISPDKRHLYVGVR-PEFRVLSYRIADDGALTFAAESP-LPGSP 82 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEec-CCCCccEEECCCCCEEEEEEC-CCCcEEEEEECCCCceEEeeeec-CCCCc
Confidence 3446789999999964 33 4444543 356778999999998887763 588999999873 332 22222 33456
Q ss_pred EEEEEcCCCCEEEEEeC-CCcEEEEEcCCC----CeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCC
Q psy6127 311 SSLNLSPVDDSFISGSY-DKTVRVWDLRQP----NNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGP 384 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~ 384 (515)
..++++|+++++++++. ++.|.+||+++. +....+........++++|++++++++. .++.|.+||+.......
T Consensus 83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~ 162 (330)
T PRK11028 83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLV 162 (330)
T ss_pred eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccc
Confidence 78999999998888764 889999999743 2223333333467788999999886554 56999999997632110
Q ss_pred c---eeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECCC--Cc--eeEEeecccc---CCCCCEEEEEecCCC
Q psy6127 385 F---ASFKCPGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAFN--GN--CVQSLSGVLN---NNASPLEATFTPDSQ 453 (515)
Q Consensus 385 ~---~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~~--~~--~~~~~~~~~~---~~~~i~~~~~sp~g~ 453 (515)
. ..... ........++|+|+|++++++.. ++.|.+|++.. ++ .+..+..... .......+.++|+|+
T Consensus 163 ~~~~~~~~~--~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~ 240 (330)
T PRK11028 163 AQEPAEVTT--VEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGR 240 (330)
T ss_pred ccCCCceec--CCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCC
Confidence 0 01111 12234568999999999988876 89999999973 32 2333322111 112234688999999
Q ss_pred EEEEEeC-CCcEEEEECCCCe----EEEEEcCCCCCCeEEEEECCCCCEEEEeeC---CEEEEcCCC
Q psy6127 454 FVASGST-DGQVHIWNAERGY----KVCVLDGDHPSAVQSLQFNPKYHMLASACS---NMAFWIPTL 512 (515)
Q Consensus 454 ~l~sgs~-dg~I~iwd~~~~~----~~~~~~~~h~~~V~~l~~sp~~~~las~~~---dv~iW~~~~ 512 (515)
+++++.. ++.|.+|++.... .+..... ......++++|+|++|+++.. .+.+|+++.
T Consensus 241 ~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~--~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 241 HLYACDRTASLISVFSVSEDGSVLSFEGHQPT--ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred EEEEecCCCCeEEEEEEeCCCCeEEEeEEEec--cccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence 9998854 6899999985432 2333322 124568999999999998763 499998753
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-21 Score=191.59 Aligned_cols=278 Identities=18% Similarity=0.236 Sum_probs=217.0
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
..+.++.+.||.+.|+|+.|...|.++++|+.|..++||..+++.+....++|.+.++.++.+.....++.+ +.|..|
T Consensus 179 kmk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaa--S~D~vI 256 (1113)
T KOG0644|consen 179 KMKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAA--SNDKVI 256 (1113)
T ss_pred HHHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhc--ccCceE
Confidence 334456788999999999999999999999999999999999999999999999999999998776555444 589999
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE------EecCCCeeEEEECCCCCEE
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM------IQLSGNKPIAAYDPEGLAF 363 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~------~~~~~~~~~~~~s~~~~~l 363 (515)
++|-+.++.++..+.+|++.|++++|+|-. +.+.||++++||.+- ..... +.....+.++.|...+..+
T Consensus 257 rvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~-~~~~y~prp~~~~~~~~~~s~~~~~~~~~f 331 (1113)
T KOG0644|consen 257 RVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARL-EPRIYVPRPLKFTEKDLVDSILFENNGDRF 331 (1113)
T ss_pred EEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccc-cccccCCCCCCcccccceeeeecccccccc
Confidence 999999999999999999999999999943 788999999999981 11111 1222335667788888899
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeeccccCCCC
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
++|+.|+.-..|.+..... +...+.-+.++.+- .+.+++-.+-.+++|++.+|.....+.+|...
T Consensus 332 ~Tgs~d~ea~n~e~~~l~~-----------~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~--- 397 (1113)
T KOG0644|consen 332 LTGSRDGEARNHEFEQLAW-----------RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDE--- 397 (1113)
T ss_pred ccccCCcccccchhhHhhh-----------hccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccc---
Confidence 9999999988887654221 11111112222222 45666777888999999999988888876554
Q ss_pred CEEEEEecCCC-EEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEc
Q psy6127 443 PLEATFTPDSQ-FVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWI 509 (515)
Q Consensus 443 i~~~~~sp~g~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~ 509 (515)
+..+.++|-+. ...+++.||...|||+-.|.+++....+| +.+.+-+||+||..++..+.-..++-
T Consensus 398 ~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh-~kl~d~kFSqdgts~~lsd~hgql~i 464 (1113)
T KOG0644|consen 398 VYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGH-GKLVDGKFSQDGTSIALSDDHGQLYI 464 (1113)
T ss_pred eeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeeccc-ceeeccccCCCCceEecCCCCCceEE
Confidence 78899999665 45578899999999999998887776534 56778899999998887765444443
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-19 Score=169.77 Aligned_cols=221 Identities=25% Similarity=0.365 Sum_probs=167.2
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
++.....+.+.||++.|+|+.|+.||.+|++||+|-.+.|||.-..+.+..+ .+|...|.++.|-|..+.-++++|..|
T Consensus 37 lrrL~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgD 116 (758)
T KOG1310|consen 37 LRRLDLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGD 116 (758)
T ss_pred HhhcchhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCc
Confidence 4445666789999999999999999999999999999999999988887776 589999999999998766666777789
Q ss_pred CeEEEEECCC----------CeeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCeE-EE------E---
Q psy6127 287 ATLRYLSLHD----------NKYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNNV-GM------I--- 345 (515)
Q Consensus 287 ~~v~vwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~-~~------~--- 345 (515)
..|+++|+.. ......+..|...|..++..|++ ..+.+++.||+++-+|++....- .. +
T Consensus 117 k~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny 196 (758)
T KOG1310|consen 117 KLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNY 196 (758)
T ss_pred ceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHh
Confidence 9999999974 23445567899999999999998 58999999999999999874211 10 0
Q ss_pred -ecCCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCC----------Cc---eee--ecCCC-------CCc---Ce
Q psy6127 346 -QLSGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKG----------PF---ASF--KCPGE-------RGC---EW 398 (515)
Q Consensus 346 -~~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~----------~~---~~~--~~~~~-------~~~---~i 398 (515)
..--...++.++|. ..+|++|+.|-..++||.+...+. +. .+. ..+.+ ... .+
T Consensus 197 ~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~ 276 (758)
T KOG1310|consen 197 NPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCC 276 (758)
T ss_pred chhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeee
Confidence 00123567889985 567999999999999995432110 00 000 00111 011 14
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy6127 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 399 ~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
+-+.|+|+|.-+++.-..-.|+++|+..++
T Consensus 277 t~vtfnpNGtElLvs~~gEhVYlfdvn~~~ 306 (758)
T KOG1310|consen 277 TYVTFNPNGTELLVSWGGEHVYLFDVNEDK 306 (758)
T ss_pred EEEEECCCCcEEEEeeCCeEEEEEeecCCC
Confidence 568899999988887777789999987654
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-18 Score=169.25 Aligned_cols=289 Identities=13% Similarity=0.149 Sum_probs=208.0
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ----GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
|+..++|.++||.++++|+|..||.|.+|.--. ......+.=|..+|.+++|+++|.+++.+ +..+.+.+|.+.
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSG--G~E~VLv~Wq~~ 281 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSG--GREGVLVLWQLE 281 (792)
T ss_pred hcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeec--ccceEEEEEeec
Confidence 556688999999999999999999999996432 12345567788999999999999988865 489999999999
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec------------CCCeeEEEECCCCCEE
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL------------SGNKPIAAYDPEGLAF 363 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------------~~~~~~~~~s~~~~~l 363 (515)
+++ .+-++.-.++|..+.++||+.+.+....|+.|.+....+.+....+.. .+-...++++|..+.+
T Consensus 282 T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~ 360 (792)
T KOG1963|consen 282 TGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSL 360 (792)
T ss_pred CCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCce
Confidence 998 556677789999999999999999999999999998765544433321 1224568899988888
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCC------CCCcCeEEEEEcCCCCEEEEEE--------CC--CcEEEEECCCC
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPG------ERGCEWTGLKFSPDGKLILVST--------NG--SIIRLFDAFNG 427 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~~~i~~l~~sp~~~~l~~~s--------~d--g~i~iwd~~~~ 427 (515)
+..+..|.|.+||+.+............. .+...+++++.+-.|.++++.- .| -.+++|-....
T Consensus 361 vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~ 440 (792)
T KOG1963|consen 361 VLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPN 440 (792)
T ss_pred eecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCC
Confidence 88889999999999875432111111111 2233567888888899998864 22 24788875543
Q ss_pred ceeEEee---ccccCCCCCEEEEEecCCC-EEEEEeCCCcEEEEECCCC----------eEEEEEcCCCCCCeEEEEECC
Q psy6127 428 NCVQSLS---GVLNNNASPLEATFTPDSQ-FVASGSTDGQVHIWNAERG----------YKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 428 ~~~~~~~---~~~~~~~~i~~~~~sp~g~-~l~sgs~dg~I~iwd~~~~----------~~~~~~~~~h~~~V~~l~~sp 493 (515)
..-..+. ..+.....+..+..+|... ..++++.||.++||-+... .+...-.- |..++++++|+.
T Consensus 441 ~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy-~k~~i~a~~fs~ 519 (792)
T KOG1963|consen 441 SKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSY-HKTPITALCFSQ 519 (792)
T ss_pred cceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeecc-ccCcccchhhcC
Confidence 3222221 1111222233334444443 8899999999999988322 23332223 788999999999
Q ss_pred CCCEEEEeeCC-EEEEcCCC
Q psy6127 494 KYHMLASACSN-MAFWIPTL 512 (515)
Q Consensus 494 ~~~~las~~~d-v~iW~~~~ 512 (515)
||..|+.+-++ +.+||...
T Consensus 520 dGslla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 520 DGSLLAVSFDDTITIWDYDT 539 (792)
T ss_pred CCcEEEEecCCEEEEecCCC
Confidence 99999988765 99999876
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-20 Score=173.73 Aligned_cols=302 Identities=26% Similarity=0.403 Sum_probs=232.8
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
++...+...|.+|.+.|..+.|+..|..|++||.|..|.+||+..++....+ .+|...|..-.|.|...-.-+++++.|
T Consensus 129 vqr~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~d 208 (559)
T KOG1334|consen 129 VQRLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRD 208 (559)
T ss_pred HHHhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceecccc
Confidence 4556667789999999999999999999999999999999999998877666 478788888888886554444455689
Q ss_pred CeEEEEECCCCee---eEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEe---cCC----CeeEEE
Q psy6127 287 ATLRYLSLHDNKY---VRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQ---LSG----NKPIAA 355 (515)
Q Consensus 287 ~~v~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~----~~~~~~ 355 (515)
|.|++=.+..... ...+..|.++|.-++.-|+.. .|.+++.|+.+.-+|++.+.....+. ... ....++
T Consensus 209 gqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia 288 (559)
T KOG1334|consen 209 GQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIA 288 (559)
T ss_pred CceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEe
Confidence 9999877644332 345567999999999999876 69999999999999999876654442 111 245688
Q ss_pred ECCCCC-EEEEEECCCcEEEEEeecCCCCCcee-------eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-
Q psy6127 356 YDPEGL-AFAIGVNSDSIKLYDVRSYDKGPFAS-------FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN- 426 (515)
Q Consensus 356 ~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~~-------~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~- 426 (515)
.+|... .+++|+.|..+++||.+......... -.......-.|++++|+.++.-++++..|-.|+++.-..
T Consensus 289 ~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~ 368 (559)
T KOG1334|consen 289 VDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMG 368 (559)
T ss_pred cCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccc
Confidence 888654 89999999999999998755331111 111123345689999998888888888888999995432
Q ss_pred -C----------ceeE-EeeccccCCCCCEEEEE-ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 427 -G----------NCVQ-SLSGVLNNNASPLEATF-TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 427 -~----------~~~~-~~~~~~~~~~~i~~~~~-sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
| ..++ .+++|.+... |..+-| -|...|+++|++=|.|.||+-.+++.+..+.+.+ .-|+|+.-+|
T Consensus 369 ~G~~p~~~s~~~~~~k~vYKGHrN~~T-VKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr-~VVNCLEpHP 446 (559)
T KOG1334|consen 369 DGSEPDPSSPREQYVKRVYKGHRNSRT-VKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDR-HVVNCLEPHP 446 (559)
T ss_pred cCCCCCCCcchhhccchhhcccccccc-cceeeeccCccceEEecCccceEEEEecchhHHHHHhhccc-ceEeccCCCC
Confidence 2 1222 2667766544 666654 5778999999999999999999999999998844 4899999999
Q ss_pred CCCEEEEee--CCEEEEcCC
Q psy6127 494 KYHMLASAC--SNMAFWIPT 511 (515)
Q Consensus 494 ~~~~las~~--~dv~iW~~~ 511 (515)
--.+||+++ .||+||.+-
T Consensus 447 ~~PvLAsSGid~DVKIWTP~ 466 (559)
T KOG1334|consen 447 HLPVLASSGIDHDVKIWTPL 466 (559)
T ss_pred CCchhhccCCccceeeecCC
Confidence 999999987 569999873
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-19 Score=158.90 Aligned_cols=274 Identities=14% Similarity=0.215 Sum_probs=200.1
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecC-CCeEEEEEeeCCCeEEEEECCCCeeeE--EecCCC-CC
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS-KTTAIHASTKVDATLRYLSLHDNKYVR--YFPGHV-RK 309 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~~~d~~v~vwd~~~~~~~~--~~~~h~-~~ 309 (515)
..+|++-..|.|++||..+++.+..++++...++.+.|..+ +...+. +++.||+|++||+++..... .+.++. .+
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~-s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~ 119 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVI-SCSSDGTVRLWDIRSQAESARISWTQQSGTP 119 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeE-EeccCCeEEEEEeecchhhhheeccCCCCCc
Confidence 56888888999999999999999999999999999999885 333333 33579999999998876543 344555 56
Q ss_pred eEEEEEcCCCCEEEEEeC----CCcEEEEEcCCCCe-EEEE--ecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCC
Q psy6127 310 VSSLNLSPVDDSFISGSY----DKTVRVWDLRQPNN-VGMI--QLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~----dg~i~iwd~~~~~~-~~~~--~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
..+++.+..++.+++|.. |-.|.+||+|..+. +..+ .|...++++.|+| +.++|++|+.||.+.+||+....
T Consensus 120 f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~ 199 (376)
T KOG1188|consen 120 FICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN 199 (376)
T ss_pred ceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence 788888777888888753 67899999998776 5555 5667799999999 56899999999999999998753
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeecccc---------CCCCCEEEEEecC
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLN---------NNASPLEATFTPD 451 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~i~~~~~sp~ 451 (515)
... .+...-.+...|..+.|..++ +.|.+-+...+..+|+++.+.+...+....- ....+...-...+
T Consensus 200 EeD--aL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~ 277 (376)
T KOG1188|consen 200 EED--ALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGD 277 (376)
T ss_pred chh--hHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCC
Confidence 211 122223566778899998876 4688888889999999998886554443210 0111222222224
Q ss_pred CCEEEEEeC-CCcEEEEECC------CCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 452 SQFVASGST-DGQVHIWNAE------RGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 452 g~~l~sgs~-dg~I~iwd~~------~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
+...+.++. -|+..++-+. ..+.+..+.++|..-|.++.|...+.++.+|+.| +.+|..
T Consensus 278 ~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 278 KDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred cceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence 445555544 4555555432 2456667777788889999999999999999977 889984
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=165.64 Aligned_cols=277 Identities=17% Similarity=0.246 Sum_probs=195.4
Q ss_pred eccCCCCceeeeeeccce--EEeCCcceeeeehhhhHhhhh-hh-hhhhhheeecccccccccccCCCCcCCCcchhhcc
Q psy6127 88 SCFPNISSLEIKRIDTEE--IVLNPSCLIKLKEIKCMLAQK-AV-PKILKIVAKSENMCNLTKLDLPYNKLGSWDFELLH 163 (515)
Q Consensus 88 ~~~~~~~~l~i~~~~~~~--~~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~ 163 (515)
..+-|.+.|.+|-....+ +.+|.--.-.+.-+|-.+.+. .. +.--+++|.|..+..| .+||+.-..
T Consensus 144 r~eddvs~LEvYVyn~~e~nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~I----------eIWDLDI~d 213 (463)
T KOG0270|consen 144 RNEDDVSYLEVYVYNEEEENLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEI----------EIWDLDIVD 213 (463)
T ss_pred eccCCceEEEEEEEcCCCcceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCcee----------EEecccccc
Confidence 346788888887666655 232222211111122222222 10 1123799999999999 999964221
Q ss_pred cc---cc------------------ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCC
Q psy6127 164 SL---SS------------------LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTD 222 (515)
Q Consensus 164 ~l---~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~ 222 (515)
.+ .+ -.+|...|.+++++..... +.+|++-|.++++|| +..++|..++..|.+
T Consensus 214 ~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~n----VLaSgsaD~TV~lWD--~~~g~p~~s~~~~~k 287 (463)
T KOG0270|consen 214 AVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRN----VLASGSADKTVKLWD--VDTGKPKSSITHHGK 287 (463)
T ss_pred ccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccce----eEEecCCCceEEEEE--cCCCCcceehhhcCC
Confidence 11 11 1244444566666544322 445999999999999 999999999999999
Q ss_pred cEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eee
Q psy6127 223 KINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYV 300 (515)
Q Consensus 223 ~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~ 300 (515)
.|.+++|+| ...+|++||.|++|.+.|.+........-.-.+.|..++|.|.....++++ ..||+|+-+|++.. +++
T Consensus 288 ~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~-tddG~v~~~D~R~~~~~v 366 (463)
T KOG0270|consen 288 KVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVS-TDDGTVYYFDIRNPGKPV 366 (463)
T ss_pred ceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEe-cCCceEEeeecCCCCCce
Confidence 999999999 568999999999999999984322222122346799999999988877777 47999999999875 899
Q ss_pred EEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecC---CCeeEEEECCCC-CEEEEEECCCcEEEE
Q psy6127 301 RYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLS---GNKPIAAYDPEG-LAFAIGVNSDSIKLY 375 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~s~~~-~~l~~g~~dg~i~i~ 375 (515)
.+++.|.++|.++++++.-+ ++++++.|+.|++|++..-.......+. +...|.++.|+- -.++.|+..+.+++|
T Consensus 367 wt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vw 446 (463)
T KOG0270|consen 367 WTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVW 446 (463)
T ss_pred eEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEe
Confidence 99999999999999998654 7899999999999998755443222111 124566677754 457778888899999
Q ss_pred EeecCC
Q psy6127 376 DVRSYD 381 (515)
Q Consensus 376 d~~~~~ 381 (515)
|+.+..
T Consensus 447 d~~~~~ 452 (463)
T KOG0270|consen 447 DIFTNS 452 (463)
T ss_pred ecccCh
Confidence 998743
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-18 Score=166.39 Aligned_cols=172 Identities=16% Similarity=0.263 Sum_probs=127.9
Q ss_pred CCcEEEEEcCCCCe-----EEEEecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCCCC--ceeeecCCCCCcCeE
Q psy6127 328 DKTVRVWDLRQPNN-----VGMIQLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGP--FASFKCPGERGCEWT 399 (515)
Q Consensus 328 dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~~i~ 399 (515)
.|.|-||+++.... +-.+.....++.+.|+| |...|++++.||.|++|.+..+.... .........|...|+
T Consensus 602 gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~ 681 (1012)
T KOG1445|consen 602 GGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKIT 681 (1012)
T ss_pred CceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEE
Confidence 45555555544221 11222334477888998 77889999999999999998754221 112233457888999
Q ss_pred EEEEcC-CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe-EEEE
Q psy6127 400 GLKFSP-DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY-KVCV 477 (515)
Q Consensus 400 ~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~-~~~~ 477 (515)
++.|+| -...|++++.|-+|++||+.+++....+.+|.+. |..++|||+|+.+|+.+.||+|++|+..+++ ++..
T Consensus 682 slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdq---If~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~E 758 (1012)
T KOG1445|consen 682 SLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQ---IFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYE 758 (1012)
T ss_pred EEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCc---eeEEEECCCCcceeeeecCceEEEeCCCCCCCcccc
Confidence 999999 4568899999999999999999988888887665 9999999999999999999999999988764 3333
Q ss_pred EcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 478 LDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 478 ~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
-.+.-...--.+.|.-||++++..+
T Consensus 759 g~gpvgtRgARi~wacdgr~viv~G 783 (1012)
T KOG1445|consen 759 GKGPVGTRGARILWACDGRIVIVVG 783 (1012)
T ss_pred CCCCccCcceeEEEEecCcEEEEec
Confidence 3332223344678888999888776
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-18 Score=173.84 Aligned_cols=291 Identities=16% Similarity=0.237 Sum_probs=209.3
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCC---CceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKK---YGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
+...+-..+.|+|-...++++...-.|++||.+.++....+..+. ..|+.+.+....+.-+..+++.||.|+||+--
T Consensus 1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y 1141 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDY 1141 (1387)
T ss_pred cCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccc
Confidence 334456778899988899999877899999999999888776543 56888888766554444444679999999742
Q ss_pred -----CCeeeEEecC-------CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECC---CC
Q psy6127 296 -----DNKYVRYFPG-------HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP---EG 360 (515)
Q Consensus 296 -----~~~~~~~~~~-------h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~---~~ 360 (515)
+.+.+..+.+ ..+.-.-++|.....+|+++|.-..|+|||.........+........-+.++ .|
T Consensus 1142 ~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~g 1221 (1387)
T KOG1517|consen 1142 ADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHG 1221 (1387)
T ss_pred ccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCC
Confidence 2233333221 12222446788777788888878999999999998888876654333333333 57
Q ss_pred CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC--eEEEEEcCCCC-EEEEEECCCcEEEEECCCCceeEEe--ec
Q psy6127 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE--WTGLKFSPDGK-LILVSTNGSIIRLFDAFNGNCVQSL--SG 435 (515)
Q Consensus 361 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~~~~~~~~--~~ 435 (515)
+.+++|..||.+++||.+...... .......|... |..+.+.+.|- .|++|+.+|.|++||++.......+ ..
T Consensus 1222 n~i~AGfaDGsvRvyD~R~a~~ds--~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~ 1299 (1387)
T KOG1517|consen 1222 NIIAAGFADGSVRVYDRRMAPPDS--LVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVA 1299 (1387)
T ss_pred ceEEEeecCCceEEeecccCCccc--cceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeee
Confidence 999999999999999999855432 22223445444 88999998765 4999999999999999985322222 22
Q ss_pred cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC------CCCCCeEEEEECCCCCEEEEeeCC--EEE
Q psy6127 436 VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG------DHPSAVQSLQFNPKYHMLASACSN--MAF 507 (515)
Q Consensus 436 ~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~------~h~~~V~~l~~sp~~~~las~~~d--v~i 507 (515)
+....+..+++..+++...+|+|+. +.|+||++. |+.+..+.. ...+.+.+++|+|...++|+|..| |.|
T Consensus 1300 ~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~i 1377 (1387)
T KOG1517|consen 1300 HWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSI 1377 (1387)
T ss_pred ccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEE
Confidence 2222334899999999999999988 999999985 444444332 234678999999999999998766 888
Q ss_pred EcCCCC
Q psy6127 508 WIPTLS 513 (515)
Q Consensus 508 W~~~~~ 513 (515)
|..+.+
T Consensus 1378 Ys~~k~ 1383 (1387)
T KOG1517|consen 1378 YSCEKP 1383 (1387)
T ss_pred eecCCc
Confidence 877644
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=169.04 Aligned_cols=251 Identities=14% Similarity=0.219 Sum_probs=194.0
Q ss_pred EEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEE
Q psy6127 201 TKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIH 280 (515)
Q Consensus 201 i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 280 (515)
+-++| ...+..+++++||.+.|+|++|+.||+.+|+|+.|..|.+|+.+-...++ -.|.+.|.|+.|+|-...+++
T Consensus 35 lliyD--~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~Lk--YSH~D~IQCMsFNP~~h~Las 110 (1081)
T KOG1538|consen 35 LLVYD--TSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILK--YSHNDAIQCMSFNPITHQLAS 110 (1081)
T ss_pred EEEEe--CCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceee--eccCCeeeEeecCchHHHhhh
Confidence 44566 77789999999999999999999999999999999999999865332222 358899999999999888877
Q ss_pred EEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe---cCCCeeEEEEC
Q psy6127 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ---LSGNKPIAAYD 357 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~s 357 (515)
++ -...-+|..+..... ..+ ....+.+.+|..||++++.|-.||+|.+-+-...+....-. ..+++.+++|+
T Consensus 111 Cs---LsdFglWS~~qK~V~-K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~ 185 (1081)
T KOG1538|consen 111 CS---LSDFGLWSPEQKSVS-KHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWN 185 (1081)
T ss_pred cc---hhhccccChhhhhHH-hhh-hheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEec
Confidence 65 456678876543322 222 34678899999999999999999999998754444443333 34568899999
Q ss_pred CCC-----CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE
Q psy6127 358 PEG-----LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 358 ~~~-----~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
|.. ..+++...+.++..|.+....... ...-.-...++.+-|+|.+++.|+.|+.+++|. +.|-.+-+
T Consensus 186 p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk------~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGT 258 (1081)
T KOG1538|consen 186 PSSGEGRNDILAVADWGQTLSFYQLSGKQIGK------DRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGT 258 (1081)
T ss_pred CCCCCCccceEEEEeccceeEEEEecceeecc------cccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEee
Confidence 953 568888888999999887632111 111222334899999999999999999999997 56666666
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
+.. ....|+.++..|++++++.|+.||+|..|++-
T Consensus 259 vg~---~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 259 VGE---QDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred ccc---cceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence 554 34459999999999999999999999999874
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=186.55 Aligned_cols=245 Identities=19% Similarity=0.275 Sum_probs=194.6
Q ss_pred CCcEEEEEEcCCCCE----EEEEeCCCeEEEEECCC---C---eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 221 TDKINSLDYSSDGSL----LISCSDDDQIIIYDCEQ---G---TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 221 ~~~I~~l~~spd~~~----lasgs~dg~i~iwd~~~---~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
....+.++|.+.|.. +|.|..||.|.+||... + ..+.+...|++.|..+.|++....++ ++|+.||.|.
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlL-ASGa~~geI~ 142 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLL-ASGADDGEIL 142 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCcee-eccCCCCcEE
Confidence 456788999886655 88899999999999865 2 33566788999999999999887554 4556899999
Q ss_pred EEECCCCeeeEEe--cCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecCCC---eeEEEECCCCC-EE
Q psy6127 291 YLSLHDNKYVRYF--PGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLSGN---KPIAAYDPEGL-AF 363 (515)
Q Consensus 291 vwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~s~~~~-~l 363 (515)
|||+..-+....+ ....+.|.+++|+..-. .|++++.+|.+.|||++..+.+-.+..... ...++|+|+.. .+
T Consensus 143 iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql 222 (1049)
T KOG0307|consen 143 IWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQL 222 (1049)
T ss_pred EeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceee
Confidence 9999875544444 22457899999987544 688899999999999999987776644433 66899999864 46
Q ss_pred EEEECCC---cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeeccccC
Q psy6127 364 AIGVNSD---SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN 439 (515)
Q Consensus 364 ~~g~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~ 439 (515)
++++.|. .|.+||+|... ...+....|...|.++.|++.+ .++++++.|+.|.+|+.++++.+..+...
T Consensus 223 ~~As~dd~~PviqlWDlR~as----sP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~--- 295 (1049)
T KOG0307|consen 223 LVASGDDSAPVIQLWDLRFAS----SPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQ--- 295 (1049)
T ss_pred eeecCCCCCceeEeecccccC----CchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCC---
Confidence 6666543 69999998754 2444456888899999999966 78899999999999999999999888763
Q ss_pred CCCCEEEEEecCCC-EEEEEeCCCcEEEEECCCCe
Q psy6127 440 NASPLEATFTPDSQ-FVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 440 ~~~i~~~~~sp~g~-~l~sgs~dg~I~iwd~~~~~ 473 (515)
...+..+.|+|... .+++++-||.|.||.+....
T Consensus 296 ~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 296 GNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred CcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 33489999999776 88888999999999987653
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-16 Score=142.93 Aligned_cols=239 Identities=19% Similarity=0.294 Sum_probs=181.5
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
....+..+.|+.|...|..|+.|| .++|+.+....... ...+.+.-+...-....+++++...-..+++.+++.+..
T Consensus 4 ~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~--~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ 80 (391)
T KOG2110|consen 4 KKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFS--KDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTT 80 (391)
T ss_pred CCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhc--ccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCce
Confidence 345677788999999999999998 68888776444222 223344444444445667777654445699999988887
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC--C--CeeEEEECCCCCEEEEEE--CCCcEE
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS--G--NKPIAAYDPEGLAFAIGV--NSDSIK 373 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~--~~~~~~~s~~~~~l~~g~--~dg~i~ 373 (515)
+..+. ...+|.++.++ .+.|+.+-.+ .|.|||+++.+.+.++... . .+..+++++.+.+++.-+ ..|.|.
T Consensus 81 ICe~~-fpt~IL~VrmN--r~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~ 156 (391)
T KOG2110|consen 81 ICEIF-FPTSILAVRMN--RKRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVV 156 (391)
T ss_pred EEEEe-cCCceEEEEEc--cceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEE
Confidence 77665 55779999998 4556665554 4999999999998887433 2 234445555566888743 468999
Q ss_pred EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCc-EEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 374 LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI-IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
+||..+.+ .......|.+.+.+++|+|+|.+||++++.|+ |||+.+.+|+.+.++..... ...|.+++|+|++
T Consensus 157 l~d~~nl~-----~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~-~~~IySL~Fs~ds 230 (391)
T KOG2110|consen 157 LFDTINLQ-----PVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY-PVSIYSLSFSPDS 230 (391)
T ss_pred EEEcccce-----eeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce-eeEEEEEEECCCC
Confidence 99998854 44444589999999999999999999999886 69999999999999986544 4458999999999
Q ss_pred CEEEEEeCCCcEEEEECCC
Q psy6127 453 QFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~ 471 (515)
++|++.++.++|+++.++.
T Consensus 231 ~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 231 QFLAASSNTETVHIFKLEK 249 (391)
T ss_pred CeEEEecCCCeEEEEEecc
Confidence 9999999999999998764
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-17 Score=167.65 Aligned_cols=235 Identities=16% Similarity=0.189 Sum_probs=171.1
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCee--eEEecCCCCCeEEEEEcCC
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKY--VRYFPGHVRKVSSLNLSPV 318 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~ 318 (515)
+..|.+||.... ....+..+...+...+|+|+|+.+++++.. .+..|++||+.+++. +..+.+| ...++|+||
T Consensus 183 ~~~i~i~d~dg~-~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVADYDGF-NQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPD 258 (429)
T ss_pred eEEEEEECCCCC-CceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCC
Confidence 478999998644 456677788889999999999999887632 234799999988754 3334444 346899999
Q ss_pred CCEEEEEe-CCCcEEEE--EcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCC
Q psy6127 319 DDSFISGS-YDKTVRVW--DLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGER 394 (515)
Q Consensus 319 ~~~l~s~s-~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~ 394 (515)
|+.|+.++ .+|.+.+| |+.+++...............|+|||+.++..+ .+|...+|++....... ... .+
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~-~~l----~~ 333 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA-SLV----GG 333 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe-EEe----cC
Confidence 99888764 67876555 666666554444445567899999999887665 57889999887533221 111 11
Q ss_pred CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC--CCC
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA--ERG 472 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~--~~~ 472 (515)
.. ....|+|+|+++++.+.++ +.+||+.+++........ . ...+.|+|||++|+.++.+|.+.+|++ .+|
T Consensus 334 ~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~---~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G 405 (429)
T PRK01742 334 RG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--L---DESPSISPNGIMIIYSSTQGLGKVLQLVSADG 405 (429)
T ss_pred CC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--C---CCCceECCCCCEEEEEEcCCCceEEEEEECCC
Confidence 12 3578999999998887765 666999888754322221 1 346789999999999999998888875 368
Q ss_pred eEEEEEcCCCCCCeEEEEECCC
Q psy6127 473 YKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 473 ~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
+....+.. |.+.+...+|+|-
T Consensus 406 ~~~~~l~~-~~g~~~~p~wsp~ 426 (429)
T PRK01742 406 RFKARLPG-SDGQVKFPAWSPY 426 (429)
T ss_pred CceEEccC-CCCCCCCcccCCC
Confidence 88888876 8888999999984
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=146.30 Aligned_cols=257 Identities=18% Similarity=0.271 Sum_probs=184.1
Q ss_pred CCeEEEEECCCCee---eeEecCCCCceeEEEEecCCCeEEEEEee---CC---CeEEEEECCCCe---------eeEEe
Q psy6127 242 DDQIIIYDCEQGTS---KNTINSKKYGVDLIKFTHSKTTAIHASTK---VD---ATLRYLSLHDNK---------YVRYF 303 (515)
Q Consensus 242 dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~s~~---~d---~~v~vwd~~~~~---------~~~~~ 303 (515)
|+.|.+.+++.+.. .+.+..|.+.|+.++-+|....++..... .. ..+.+|.+.... ++..+
T Consensus 39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L 118 (370)
T KOG1007|consen 39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL 118 (370)
T ss_pred cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence 56677766654322 23456677889999999987776544321 11 347899886432 23334
Q ss_pred c-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe-EEEEe------cCCCeeEEEECC--CCCEEEEEECCCcEE
Q psy6127 304 P-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN-VGMIQ------LSGNKPIAAYDP--EGLAFAIGVNSDSIK 373 (515)
Q Consensus 304 ~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~------~~~~~~~~~~s~--~~~~l~~g~~dg~i~ 373 (515)
. .+-+.|.|+.|.|++..+++-. |..|.+|++..+.. +..+. +.....+-+|+| +|+.+++. .|+++.
T Consensus 119 dteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~ 196 (370)
T KOG1007|consen 119 DTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQ 196 (370)
T ss_pred CHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEE
Confidence 3 4556899999999999998876 89999999988766 33332 223356678888 77777775 689999
Q ss_pred EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC-EEEEEECCCcEEEEECCCC-ceeEEeeccccCCCCCEEEEEecC
Q psy6127 374 LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK-LILVSTNGSIIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
.||+++... .......|...++.+.|+|+-+ +|++++.||.|++||.+.. .+++.+.+|. ..++++.|+|.
T Consensus 197 ~~D~RT~~~----~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~Hs---HWvW~VRfn~~ 269 (370)
T KOG1007|consen 197 FWDLRTMKK----NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHS---HWVWAVRFNPE 269 (370)
T ss_pred EEEccchhh----hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCc---eEEEEEEecCc
Confidence 999998652 4444678888999999999866 5778889999999999865 4566666654 44999999995
Q ss_pred -CCEEEEEeCCCcEEEEECCCC-----------------------------eEEEEEcCCCCCCeEEEEECCCCC-EEEE
Q psy6127 452 -SQFVASGSTDGQVHIWNAERG-----------------------------YKVCVLDGDHPSAVQSLQFNPKYH-MLAS 500 (515)
Q Consensus 452 -g~~l~sgs~dg~I~iwd~~~~-----------------------------~~~~~~~~~h~~~V~~l~~sp~~~-~las 500 (515)
.+++.+|+.|..|.+|...+- -.+.++.. |.+.|.+++|+.-.. ++|+
T Consensus 270 hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyde-hEDSVY~~aWSsadPWiFAS 348 (370)
T KOG1007|consen 270 HDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDE-HEDSVYALAWSSADPWIFAS 348 (370)
T ss_pred cceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccc-cccceEEEeeccCCCeeEEE
Confidence 578899999999999965321 12234444 999999999998555 5566
Q ss_pred eeCCEEEE
Q psy6127 501 ACSNMAFW 508 (515)
Q Consensus 501 ~~~dv~iW 508 (515)
-+-|+|+-
T Consensus 349 LSYDGRvi 356 (370)
T KOG1007|consen 349 LSYDGRVI 356 (370)
T ss_pred eccCceEE
Confidence 67676654
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=149.65 Aligned_cols=233 Identities=15% Similarity=0.278 Sum_probs=178.5
Q ss_pred CcEEEEEEc-------CCCCEEEEEeCCCeEEEEECCCCeeeeEecCCC-----CceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 222 DKINSLDYS-------SDGSLLISCSDDDQIIIYDCEQGTSKNTINSKK-----YGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 222 ~~I~~l~~s-------pd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
..|...+|- |+..++|+.+.|.-|++||.-+|+....+++-. ....+++|+|||..++.+ ....|
T Consensus 105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG---ykrci 181 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG---YKRCI 181 (406)
T ss_pred CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec---ccceE
Confidence 345565654 677899999999999999999999988776432 346789999999998765 59999
Q ss_pred EEEEC-CCCeeeEEe-------cCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCC
Q psy6127 290 RYLSL-HDNKYVRYF-------PGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPE 359 (515)
Q Consensus 290 ~vwd~-~~~~~~~~~-------~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~ 359 (515)
+++|+ +.|+.-..+ .+..+-+.+++|+|... .++.|+....+-||.-..+.+...+ .+.+.++.+.|.++
T Consensus 182 rvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~ed 261 (406)
T KOG2919|consen 182 RVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCED 261 (406)
T ss_pred EEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccC
Confidence 99998 555432111 23467899999999765 8999999999999998888888877 55677999999999
Q ss_pred CCEEEEEEC-CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CceeEEeeccc
Q psy6127 360 GLAFAIGVN-SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-GNCVQSLSGVL 437 (515)
Q Consensus 360 ~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-~~~~~~~~~~~ 437 (515)
|+.|.+|.. +..|..||+|................+..| -....|++++|++|+.||.|++||+++ |..+..+..+.
T Consensus 262 Gn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~s 340 (406)
T KOG2919|consen 262 GNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRI-LFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYS 340 (406)
T ss_pred cCeecccccCCCeEEEEeehhccchhhhhhhhccCccceE-EEecCCCCceeeccCCCccEEEEecCCCCCccccccccc
Confidence 999999874 789999999986533222222222233333 455678999999999999999999988 66555555544
Q ss_pred cCCCCCEEEEEecCCCEEEEEeCC
Q psy6127 438 NNNASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~d 461 (515)
.. ++.++++|--.++|+++..
T Consensus 341 d~---vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 341 DT---VNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred cc---ccceecCcccceeeeccCc
Confidence 33 8899999998888887643
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.4e-17 Score=161.86 Aligned_cols=264 Identities=13% Similarity=0.144 Sum_probs=191.2
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee--eEE----ecCCCCCeEEEEEc
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY--VRY----FPGHVRKVSSLNLS 316 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~--~~~----~~~h~~~v~~l~~~ 316 (515)
+.+.+|+++........-.....|.++.|+|....+++++ ..+|.|.+||++.+.. ... ...|..+++.+.|.
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG-~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~ 300 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGG-CYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL 300 (555)
T ss_pred ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEee-ccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence 4799999987633333333457899999999988887666 5899999999987765 222 24688999999997
Q ss_pred CCCC--EEEEEeCCCcEEEEEcCCCCeEEE-------------EecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecC
Q psy6127 317 PVDD--SFISGSYDKTVRVWDLRQPNNVGM-------------IQLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSY 380 (515)
Q Consensus 317 ~~~~--~l~s~s~dg~i~iwd~~~~~~~~~-------------~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~ 380 (515)
.+-. -+++++.||.|..|+++.-..... ......+.++.|.+ +...+++|+.+|.|.--+-...
T Consensus 301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~ 380 (555)
T KOG1587|consen 301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY 380 (555)
T ss_pred ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence 7544 499999999999998875432111 11223467788887 5677999999999877444333
Q ss_pred CCCC---ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC-CCceeEEeeccccCCCCCEEEEEecCCC-EE
Q psy6127 381 DKGP---FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF-NGNCVQSLSGVLNNNASPLEATFTPDSQ-FV 455 (515)
Q Consensus 381 ~~~~---~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l 455 (515)
.... .........|.++|.++.++|-+..++..+.|.++++|.-. ...++..+..+ ...+++++|||-.. .+
T Consensus 381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~---~~~v~~vaWSptrpavF 457 (555)
T KOG1587|consen 381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSS---PDYVTDVAWSPTRPAVF 457 (555)
T ss_pred cccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhc---cceeeeeEEcCcCceEE
Confidence 2222 11233456788899999999987766666669999999977 55555555543 33389999999764 66
Q ss_pred EEEeCCCcEEEEECCCC--eEEEEEcCCCCCCeEEEEECCCCCEEEEee--CCEEEEcCC
Q psy6127 456 ASGSTDGQVHIWNAERG--YKVCVLDGDHPSAVQSLQFNPKYHMLASAC--SNMAFWIPT 511 (515)
Q Consensus 456 ~sgs~dg~I~iwd~~~~--~~~~~~~~~h~~~V~~l~~sp~~~~las~~--~dv~iW~~~ 511 (515)
+++..||.+.+||+... .++.+... +....+.+.|++.|++++.|+ |++.+|++.
T Consensus 458 ~~~d~~G~l~iWDLl~~~~~Pv~s~~~-~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 458 ATVDGDGNLDIWDLLQDDEEPVLSQKV-CSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred EEEcCCCceehhhhhccccCCcccccc-cccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 77788999999998654 45555554 456677889999999999998 457888774
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-17 Score=146.88 Aligned_cols=274 Identities=18% Similarity=0.292 Sum_probs=198.4
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC
Q psy6127 226 SLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 226 ~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~ 305 (515)
-.+|||+|+++|+++.- .+.|-|.++-+..+.+.. -..|..+.|..+..+++++. ..++.|.+|++...+-...+..
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~-yk~~~vqvwsl~Qpew~ckIde 89 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKADSCHILCVA-YKDPKVQVWSLVQPEWYCKIDE 89 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeeccceeeeeee-eccceEEEEEeecceeEEEecc
Confidence 35799999999999865 788888887665444332 35677889998888877766 5899999999999988888888
Q ss_pred CCCCeEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCC--------------
Q psy6127 306 HVRKVSSLNLSPVDDS-FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD-------------- 370 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-------------- 370 (515)
...++.+++|+|||+. |.+..-|-.|.+|.+.+.+....-.....+..++|+|+|++.+..+...
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ 169 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWI 169 (447)
T ss_pred CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHH
Confidence 8899999999999974 5566678999999999988776665556678899999999887765422
Q ss_pred ----------------------cEEEEEeecCCCCCceeeec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy6127 371 ----------------------SIKLYDVRSYDKGPFASFKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 371 ----------------------~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~ 427 (515)
.+.+||--- ..+. ..+..-.+..++|+|.++++++|+.|+.+|+.+--+.
T Consensus 170 ll~~f~~dT~DltgieWsPdg~~laVwd~~L-------eykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tW 242 (447)
T KOG4497|consen 170 LLKEFKLDTIDLTGIEWSPDGNWLAVWDNVL-------EYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTW 242 (447)
T ss_pred HHHhcCCCcccccCceECCCCcEEEEecchh-------hheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeee
Confidence 223333211 0110 1122345778999999999999999999887653322
Q ss_pred ceeEEe------------------------------------------------------------e---ccccCCCCCE
Q psy6127 428 NCVQSL------------------------------------------------------------S---GVLNNNASPL 444 (515)
Q Consensus 428 ~~~~~~------------------------------------------------------------~---~~~~~~~~i~ 444 (515)
+....+ + ...+....+.
T Consensus 243 k~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g 322 (447)
T KOG4497|consen 243 KPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAG 322 (447)
T ss_pred eehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccc
Confidence 111100 0 0011122456
Q ss_pred EEEEecCCCEEEEEeCC--CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 445 EATFTPDSQFVASGSTD--GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~d--g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
-++|++|..++++-.+. +.+.+||++..+.-..+. ...+|....|+|....|+.+.+. +.+|.+.
T Consensus 323 ~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi--Qk~piraf~WdP~~prL~vctg~srLY~W~ps 391 (447)
T KOG4497|consen 323 KLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI--QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPS 391 (447)
T ss_pred eeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh--hccceeEEEeCCCCceEEEEcCCceEEEEcCC
Confidence 78999999999987543 679999999887777776 56689999999987777766655 6666654
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.6e-18 Score=159.08 Aligned_cols=260 Identities=13% Similarity=0.158 Sum_probs=182.0
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEE-ec-------CCCeEEEEEeeCCCeEE
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKF-TH-------SKTTAIHASTKVDATLR 290 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~-------~~~~l~~~s~~~d~~v~ 290 (515)
-|...|.|+.|+.....+.+++++..++-||+. ......+......+....+ -+ ..+.++++ +.||.+.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~-~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~--s~DGkf~ 88 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVS-RDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLIC--SNDGRFV 88 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeeccc-chhhhhhhCCcccCCccccccccccCCCCCcceEEEE--cCCceEE
Confidence 466777899999887777666554444444544 3332222222221211111 11 12234444 3699999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECC
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
+.+ +.++..+....|.+.+.+-.|+|||.-|++++.||.|++|.- +|-...++ +...++.|++|.|+.+.++.+ ..
T Consensus 89 il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c-~g 165 (737)
T KOG1524|consen 89 ILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFC-QG 165 (737)
T ss_pred Eec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEe-cC
Confidence 887 556777778899999999999999999999999999999984 44333333 556679999999998887776 45
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
+.+.|=.+.... .......|.+-|.++.|+|..+.+++|++|-..++||. .|..+..-.. +..+|++++|.
T Consensus 166 ~h~~IKpL~~n~-----k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~---~ey~ITSva~n 236 (737)
T KOG1524|consen 166 GHISIKPLAANS-----KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAA---EEYAITSVAFN 236 (737)
T ss_pred CeEEEeeccccc-----ceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCCh---hccceeeeeec
Confidence 666666555432 22234688999999999999999999999999999995 4555544433 55669999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEE
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAF 507 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~i 507 (515)
|+ +.++.++. ++.+ +.....+.|..++|||||..++.|.+.+.+
T Consensus 237 pd-~~~~v~S~-nt~R------------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v 280 (737)
T KOG1524|consen 237 PE-KDYLLWSY-NTAR------------FSSPRVGSIFNLSWSADGTQATCGTSTGQL 280 (737)
T ss_pred cc-cceeeeee-eeee------------ecCCCccceEEEEEcCCCceeeccccCceE
Confidence 99 55665553 3344 333367899999999999999998876443
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-17 Score=150.19 Aligned_cols=299 Identities=16% Similarity=0.179 Sum_probs=193.6
Q ss_pred heeecccccccccccCCCCcCCCcchhhcc---------ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEc
Q psy6127 134 IVAKSENMCNLTKLDLPYNKLGSWDFELLH---------SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCS 204 (515)
Q Consensus 134 ~la~~~~~~~i~~~~~~~n~~~~wd~~~~~---------~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~w 204 (515)
.+|+|..+-.| ++|.++.++ .+..+..|+-.+..+.|++... +..|+++++.+.+|
T Consensus 28 ~laT~G~D~~i----------riW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge-----lLASg~D~g~v~lW 92 (434)
T KOG1009|consen 28 KLATAGGDKDI----------RIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE-----LLASGGDGGEVFLW 92 (434)
T ss_pred ceecccCccce----------eeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC-----eeeecCCCceEEEE
Confidence 68888888888 888876543 3456777766666666666533 34489999999999
Q ss_pred cce--------------eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEE
Q psy6127 205 ENL--------------VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 205 d~~--------------~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 270 (515)
-.. .+.|...+.+++|...|..++|+||+.++++++.|+.+++||+..|.....+..|...+..++
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgva 172 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVA 172 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceee
Confidence 754 344888899999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCC
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGN 350 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 350 (515)
|.|-+++++.-+ .|...+.+.+...+.+.... + .....-++++.. ....+++.-++.+ .-
T Consensus 173 wDpl~qyv~s~s--~dr~~~~~~~~~~~~~~~~~-~-~~m~~~~~~~~e--------~~s~rLfhDeTlk--------sF 232 (434)
T KOG1009|consen 173 WDPLNQYVASKS--SDRHPEGFSAKLKQVIKRHG-L-DIMPAKAFNERE--------GKSTRLFHDETLK--------SF 232 (434)
T ss_pred cchhhhhhhhhc--cCcccceeeeeeeeeeeeee-e-eEeeecccCCCC--------cceeeeeecCchh--------hh
Confidence 999999888776 46656666554433322211 0 001111111110 1112222211111 11
Q ss_pred eeEEEECCCCCEEEEEEC----CC-----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC----------------
Q psy6127 351 KPIAAYDPEGLAFAIGVN----SD-----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP---------------- 405 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~----dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp---------------- 405 (515)
...++|+|+|.++++... .+ +.++|+-... ..+...+. ....+...+.|+|
T Consensus 233 FrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l-~rP~~~lp---~~~k~~lavr~~pVy~elrp~~~~~~~~~ 308 (434)
T KOG1009|consen 233 FRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDL-KRPAARLP---SPKKPALAVRFSPVYYELRPLSSEKFLFV 308 (434)
T ss_pred hhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccc-cCceeecC---CCCcceEEEEeeeeEEEeccccccccccc
Confidence 334566777777666431 11 2233332221 11111111 1122222333333
Q ss_pred --CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 406 --DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 406 --~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
-+-.++.++. +.+++||..+..++...... |-..++.++|++||..|+..+.||...+--++..++
T Consensus 309 lpyrlvfaiAt~-~svyvydtq~~~P~~~v~ni--hy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 309 LPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNI--HYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred cccceEEEEeec-ceEEEeccccccceEEEeee--eeeeecceeecCCCcEEEEeccCCceEEEEEcchhc
Confidence 2334555554 57999999888777666543 334599999999999999999999988877765543
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=157.24 Aligned_cols=276 Identities=17% Similarity=0.209 Sum_probs=192.8
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
+.++..+....|.+.|.|-.|+|||.-|++++.||.|++|.- +|-...++.....+|.|++|.|+.+.++++. .+.
T Consensus 92 k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~---g~h 167 (737)
T KOG1524|consen 92 KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQ---GGH 167 (737)
T ss_pred ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEec---CCe
Confidence 456777788999999999999999999999999999999985 5766667777788999999999999888775 567
Q ss_pred EEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC
Q psy6127 289 LRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
+.+=.+.-...+-..+.|++-|.++.|+|.++.+++|+.|-..++||.........-.+..++++++|.|+ ..++.++.
T Consensus 168 ~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~ 246 (737)
T KOG1524|consen 168 ISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLLWSY 246 (737)
T ss_pred EEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccc-cceeeeee
Confidence 77777777777778899999999999999999999999999999999766555555567788999999999 66666653
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC-C------CCcee----EEeeccc
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA-F------NGNCV----QSLSGVL 437 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~-~------~~~~~----~~~~~~~ 437 (515)
+ +++ ......+.|..++|||||..+++|+..|.+.+=-+ + .++.. +.+..+.
T Consensus 247 n-t~R----------------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~~ieq~l~~~n~~~t~~~r~~I~vrd 309 (737)
T KOG1524|consen 247 N-TAR----------------FSSPRVGSIFNLSWSADGTQATCGTSTGQLIVAYAIEQQLVSGNLKATSKSRKSITVRD 309 (737)
T ss_pred e-eee----------------ecCCCccceEEEEEcCCCceeeccccCceEEEeeeehhhhhhccceeEeeccceEEeeh
Confidence 2 222 23455677889999999999999998887654221 1 11110 0111000
Q ss_pred ---------cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEE
Q psy6127 438 ---------NNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508 (515)
Q Consensus 438 ---------~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW 508 (515)
.....+.. ++-...+|+++. ...|++|.-+.......+.+ ....+.-+.-. ...+++.-+..+.++
T Consensus 310 V~~~v~d~LE~p~rv~k--~sL~Y~hLvvaT-s~qvyiys~knwntpiiidg-re~tr~lieq~-ek~fli~dgsSi~ly 384 (737)
T KOG1524|consen 310 VATGVQDILEFPQRVVK--FSLGYGHLVVAT-SLQVYIYSEKNWNTPIIIDG-REDTRNLIEQG-EKYFLILDGSSIWLY 384 (737)
T ss_pred hhhhHHHHhhCccceee--eeeceeEEEEEe-ccEEEEEecCCccCcEEEec-cccchhHhhhh-hhheEEecCcEEEEE
Confidence 01112333 333344555553 44688888766555555555 44443323222 223444434446666
Q ss_pred cCC
Q psy6127 509 IPT 511 (515)
Q Consensus 509 ~~~ 511 (515)
.++
T Consensus 385 tye 387 (737)
T KOG1524|consen 385 TYE 387 (737)
T ss_pred Eec
Confidence 554
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-17 Score=143.11 Aligned_cols=248 Identities=18% Similarity=0.226 Sum_probs=185.0
Q ss_pred eeccccCCcEEEEEEcC-CCCEEEEEeCC-------CeEEEEECCCC---------eeeeEec-CCCCceeEEEEecCCC
Q psy6127 215 KVFRENTDKINSLDYSS-DGSLLISCSDD-------DQIIIYDCEQG---------TSKNTIN-SKKYGVDLIKFTHSKT 276 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~sp-d~~~lasgs~d-------g~i~iwd~~~~---------~~~~~~~-~~~~~v~~~~~~~~~~ 276 (515)
++|..|.+.|+.++-+| |.+.|+|+..+ ..+.||.+... +++..+. .+-+.+.|+.|.|++.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~ 136 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD 136 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence 56788999999999999 66777777653 24779988643 2233333 3446899999999999
Q ss_pred eEEEEEeeCCCeEEEEECCCCee-eEEe-----cCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCCeEEEE--e
Q psy6127 277 TAIHASTKVDATLRYLSLHDNKY-VRYF-----PGHVRKVSSLNLSP--VDDSFISGSYDKTVRVWDLRQPNNVGMI--Q 346 (515)
Q Consensus 277 ~l~~~s~~~d~~v~vwd~~~~~~-~~~~-----~~h~~~v~~l~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~ 346 (515)
.++... |..|.+|+++.+.. +..+ .+|....++-+|+| +++.+++. .|+++..||+++.++...+ .
T Consensus 137 klasm~---dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dA 212 (370)
T KOG1007|consen 137 KLASMD---DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDA 212 (370)
T ss_pred eeEEec---cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhh
Confidence 988775 99999999988765 3332 23567788899999 56666665 5799999999998877766 3
Q ss_pred cCCCeeEEEECCCCC-EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEEC
Q psy6127 347 LSGNKPIAAYDPEGL-AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 347 ~~~~~~~~~~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~ 424 (515)
+...+..+.|+|+.. +|++++.||.|++||.+..+ ..+....+|...+.++.|+|. .+.+++++.|..|.+|..
T Consensus 213 Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk----~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 213 HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK----FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred hcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC----ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 444588899999865 57888999999999999855 244556788899999999994 567889999999999975
Q ss_pred CCCc---------------------eeE-----EeeccccCCCCCEEEEEecCCCE-EEEEeCCCcEEEEECC
Q psy6127 425 FNGN---------------------CVQ-----SLSGVLNNNASPLEATFTPDSQF-VASGSTDGQVHIWNAE 470 (515)
Q Consensus 425 ~~~~---------------------~~~-----~~~~~~~~~~~i~~~~~sp~g~~-l~sgs~dg~I~iwd~~ 470 (515)
..-. ..+ .+.....+...|.+++||.-..+ +|+-+.||.+.|=.+.
T Consensus 289 ~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 289 SSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred cccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 3211 000 11223345566999999986664 5677899999886664
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-15 Score=135.84 Aligned_cols=240 Identities=15% Similarity=0.247 Sum_probs=176.0
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC-----CCeEEEEECCCC
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV-----DATLRYLSLHDN 297 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~-----d~~v~vwd~~~~ 297 (515)
...+++|+.|...++.|.++| .+||+.+.-+.......+.....-+...-..+++++++|+. -+.|.|||-...
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~ 85 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE 85 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence 345599999999999998777 89999886544433333333344444444556777776543 357999997777
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCCeEEEEecC---CCeeEEEECCCCCEEEE-EECCCcE
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR-QPNNVGMIQLS---GNKPIAAYDPEGLAFAI-GVNSDSI 372 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~---~~~~~~~~s~~~~~l~~-g~~dg~i 372 (515)
+++..+. ...+|.++.+.++ .|+.. ..+.|.+|... ..+.+..+... ....+++-..+...||. |..-|.|
T Consensus 86 ~~i~el~-f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~Gqv 161 (346)
T KOG2111|consen 86 RCIIELS-FNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQV 161 (346)
T ss_pred cEEEEEE-eccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceE
Confidence 7887776 6788999999964 45544 45889999987 45555555332 22333333334445555 4467999
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCc-EEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI-IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
++-|+......+ ......|.+.|.+++.+-+|..+|+++..|+ |||||..+|+.+.++..... ...+.+++|||+
T Consensus 162 Qi~dL~~~~~~~---p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d-~A~iy~iaFSp~ 237 (346)
T KOG2111|consen 162 QIVDLASTKPNA---PSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVD-RADIYCIAFSPN 237 (346)
T ss_pred EEEEhhhcCcCC---ceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCc-hheEEEEEeCCC
Confidence 999998765431 1223578999999999999999999999887 79999999999999876543 344999999999
Q ss_pred CCEEEEEeCCCcEEEEECCC
Q psy6127 452 SQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~ 471 (515)
..+||++|+.|+++|+.++.
T Consensus 238 ~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 238 SSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred ccEEEEEcCCCeEEEEEeec
Confidence 99999999999999998765
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=172.94 Aligned_cols=290 Identities=15% Similarity=0.161 Sum_probs=222.8
Q ss_pred hhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEE
Q psy6127 159 FELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLIS 238 (515)
Q Consensus 159 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~las 238 (515)
++..+.+..+.||.+.|+|..|+.... ..+++++|..+++|. ..+..|+..++||.+.|+.++.+.+..++|+
T Consensus 177 vqkmk~ikrLlgH~naVyca~fDrtg~-----~Iitgsdd~lvKiwS--~et~~~lAs~rGhs~ditdlavs~~n~~iaa 249 (1113)
T KOG0644|consen 177 VQKMKNIKRLLGHRNAVYCAIFDRTGR-----YIITGSDDRLVKIWS--METARCLASCRGHSGDITDLAVSSNNTMIAA 249 (1113)
T ss_pred HHHHHHHHHHHhhhhheeeeeeccccc-----eEeecCccceeeeee--ccchhhhccCCCCccccchhccchhhhhhhh
Confidence 355677778889988788877774443 335899999999999 8899999999999999999999999999999
Q ss_pred EeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe----c-CCCCCeEEE
Q psy6127 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF----P-GHVRKVSSL 313 (515)
Q Consensus 239 gs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~----~-~h~~~v~~l 313 (515)
+|.|..|++|.+.++.++..+.+|++.|++++|+|-. +.+.||++++||.+- .+.... . ....-+.++
T Consensus 250 aS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~------sss~dgt~~~wd~r~-~~~~y~prp~~~~~~~~~~s~ 322 (1113)
T KOG0644|consen 250 ASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA------SSSDDGTCRIWDARL-EPRIYVPRPLKFTEKDLVDSI 322 (1113)
T ss_pred cccCceEEEEecCCCchHHHHhccccceeeeccCccc------cCCCCCceEeccccc-cccccCCCCCCcccccceeee
Confidence 9999999999999999999999999999999999976 335799999999871 111111 1 123557778
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCCCceeeecCC
Q psy6127 314 NLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 314 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
.|...+..+++++.|+.-..|......+.... ..-+..+.+ ..+.+++-.+-.+.+|++.++. ......
T Consensus 323 ~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~-----lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~-----l~H~l~ 392 (1113)
T KOG0644|consen 323 LFENNGDRFLTGSRDGEARNHEFEQLAWRSNL-----LIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQ-----LLHNLM 392 (1113)
T ss_pred eccccccccccccCCcccccchhhHhhhhccc-----eEEEeccccccccceeeeeeeEeeeeecccch-----hhhhhc
Confidence 88888889999999999888876532211100 000111111 1445556667788899998875 555567
Q ss_pred CCCcCeEEEEEcCCCCE-EEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 393 ERGCEWTGLKFSPDGKL-ILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~-l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
.|...+..+.++|-... ..+++.||...|||+-.|.+++..... ...+...+||+||..++....-|.++|.....
T Consensus 393 ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g---h~kl~d~kFSqdgts~~lsd~hgql~i~g~gq 469 (1113)
T KOG0644|consen 393 GHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG---HGKLVDGKFSQDGTSIALSDDHGQLYILGTGQ 469 (1113)
T ss_pred ccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecc---cceeeccccCCCCceEecCCCCCceEEeccCC
Confidence 78888899999996554 457889999999999999888777632 34478899999999999888889999988766
Q ss_pred CeEE
Q psy6127 472 GYKV 475 (515)
Q Consensus 472 ~~~~ 475 (515)
++..
T Consensus 470 s~s~ 473 (1113)
T KOG0644|consen 470 SKSQ 473 (1113)
T ss_pred Cccc
Confidence 5443
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.6e-18 Score=160.71 Aligned_cols=249 Identities=17% Similarity=0.211 Sum_probs=186.0
Q ss_pred eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC--------CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC
Q psy6127 257 NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD--------NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD 328 (515)
Q Consensus 257 ~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~--------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d 328 (515)
.++..|...++.++|.|....++.++ .||.+.+|+++. -+++.+|.+|.++|.|+++.+++..+++|+.|
T Consensus 288 ~tl~s~~d~ir~l~~~~sep~lit~s--ed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D 365 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEPVLITAS--EDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID 365 (577)
T ss_pred eeeecchhhhhhhhcCCCCCeEEEec--cccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence 45677888999999999998888775 899999999932 25678999999999999999999999999999
Q ss_pred CcEEEEEcCCC------C---e-EEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 329 KTVRVWDLRQP------N---N-VGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 329 g~i~iwd~~~~------~---~-~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
|+|+.|++... . . ...+ .+.+.++.+++|+....|++++.||+++.|+...... ..+.....+. .
T Consensus 366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~---~~f~~~~e~g-~ 441 (577)
T KOG0642|consen 366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP---CTFGEPKEHG-Y 441 (577)
T ss_pred ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc---cccCCccccC-C
Confidence 99999965421 1 1 1122 4556688999999999999999999999999876442 1122222232 2
Q ss_pred eEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeecccc----CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 398 WTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLN----NNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 398 i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
..++.+-... ...++...-+.-.+++...+..+..+..... ....+..+.++|.+.+.+++..|+.|+++|..++
T Consensus 442 Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~ 521 (577)
T KOG0642|consen 442 PLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTG 521 (577)
T ss_pred cceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccc
Confidence 2355554332 2222333333344445555544444432211 1123778899999999999999999999999999
Q ss_pred eEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 473 YKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 473 ~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
+++..... |...++++++.|+|.+|++++.+ +++|.++.
T Consensus 522 ~~l~s~~a-~~~svtslai~~ng~~l~s~s~d~sv~l~kld~ 562 (577)
T KOG0642|consen 522 KILHSMVA-HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDV 562 (577)
T ss_pred ccchheee-ccceecceeecCCCceEEeecCCceeehhhccc
Confidence 99999988 99999999999999999999876 88888754
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-16 Score=158.63 Aligned_cols=323 Identities=15% Similarity=0.206 Sum_probs=222.2
Q ss_pred EEEEEEeeccccceeeeeeeCCCCcEEEEcccee--eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy6127 175 SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV--RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ 252 (515)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~--~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~ 252 (515)
+.+++++++. ++ +++.+|-|.+|.+.- ..-...+.+.-|.++|++++|++||.+|++|+..|.+.+|.+.+
T Consensus 210 ~~~~spn~~~------~A-a~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 210 CVALSPNERY------LA-AGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred eEEeccccce------EE-EeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 4566666665 44 677778899997543 12233467889999999999999999999999999999999999
Q ss_pred CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC-----------CCCCeEEEEEcCCCCE
Q psy6127 253 GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG-----------HVRKVSSLNLSPVDDS 321 (515)
Q Consensus 253 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~-----------h~~~v~~l~~~~~~~~ 321 (515)
++ .+-++.-.++|..+.++||++...+.. .|+.|.+....+.....+..+ ..+-.+.++++|.-+.
T Consensus 283 ~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~--~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~ 359 (792)
T KOG1963|consen 283 GK-KQFLPRLGSPILHIVVSPDSDLYSLVL--EDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNS 359 (792)
T ss_pred CC-cccccccCCeeEEEEEcCCCCeEEEEe--cCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCc
Confidence 88 555677788999999999999877776 599999998765544333322 2345678899997778
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEEec------CC------CeeEEEECCCCCEEEEEE--------CCC--cEEEEEeec
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMIQL------SG------NKPIAAYDPEGLAFAIGV--------NSD--SIKLYDVRS 379 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~~~------~~------~~~~~~~s~~~~~l~~g~--------~dg--~i~i~d~~~ 379 (515)
++-.+..|.|.+||+-+.+.+..+.. .+ .+..++.+..|.++++.- .|| .+++|-...
T Consensus 360 ~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~ 439 (792)
T KOG1963|consen 360 LVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNP 439 (792)
T ss_pred eeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcC
Confidence 88888999999999988777655521 11 244566677799998864 233 578887776
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcC-CCC-EEEEEECCCcEEEEECCCCce--------eEEeeccccCCCCCEEEEEe
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSP-DGK-LILVSTNGSIIRLFDAFNGNC--------VQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~-~l~~~s~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~i~~~~~s 449 (515)
..+..........+|...+...++.+ ... ..++++.||.+++|-+...+. .....++ -+..++.+++|+
T Consensus 440 ~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~s-y~k~~i~a~~fs 518 (792)
T KOG1963|consen 440 NSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGS-YHKTPITALCFS 518 (792)
T ss_pred CcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeec-cccCcccchhhc
Confidence 55444444444556665555555544 333 788999999999998732211 1111222 245668999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCC-CeEEEEEcCCCCCCeEEEEECC----CCCEEEEeeCCEEEEcC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAER-GYKVCVLDGDHPSAVQSLQFNP----KYHMLASACSNMAFWIP 510 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp----~~~~las~~~dv~iW~~ 510 (515)
.||..|+.+ .|++|.+||..+ .+....... -..++..+.+.. ++...........+|++
T Consensus 519 ~dGslla~s-~~~~Itiwd~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNl 582 (792)
T KOG1963|consen 519 QDGSLLAVS-FDDTITIWDYDTKNELLCTEGS-RNWPIAELLFTAQTQNDGALVHATQQRLSVWNL 582 (792)
T ss_pred CCCcEEEEe-cCCEEEEecCCChhhhhccccc-cccchHhHhhhcccccccceeeccCceEehHhh
Confidence 999777655 688999999988 333333222 333444444333 44444444445777775
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=167.45 Aligned_cols=281 Identities=16% Similarity=0.191 Sum_probs=201.3
Q ss_pred hhheeecccccccccccCCCCcCCCcchhhccccccccCCcee---EEEEEEeeccccceeeeeeeCCCCcEEEEcccee
Q psy6127 132 LKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFV---SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV 208 (515)
Q Consensus 132 ~~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~ 208 (515)
...+++.++...| .+||.+.++.+..|..+... |..+.+. +.....|...++.|+.|++|+...
T Consensus 1076 ~p~i~~ad~r~~i----------~vwd~e~~~~l~~F~n~~~~~t~Vs~l~li---Ne~D~aLlLtas~dGvIRIwk~y~ 1142 (1387)
T KOG1517|consen 1076 EPQIAAADDRERI----------RVWDWEKGRLLNGFDNGAFPDTRVSDLELI---NEQDDALLLTASSDGVIRIWKDYA 1142 (1387)
T ss_pred CceeEEcCCcceE----------EEEecccCceeccccCCCCCCCccceeeee---cccchhheeeeccCceEEEecccc
Confidence 3556666777777 99999999999988877543 4444444 333444667899999999998654
Q ss_pred ee---eEeeeec---ccc----CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCC-CCceeEEEEecCCCe
Q psy6127 209 RS---YRVAKVF---REN----TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK-KYGVDLIKFTHSKTT 277 (515)
Q Consensus 209 ~~---~~~~~~~---~~h----~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~ 277 (515)
.. .+++..+ .++ .+.=.-++|.....+|+++|+-..|+|||.+.......+... ...++++.-...+..
T Consensus 1143 ~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn 1222 (1387)
T KOG1517|consen 1143 DKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGN 1222 (1387)
T ss_pred cccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCc
Confidence 43 2333222 222 111144678776667777777899999999988887777544 455777766555433
Q ss_pred EEEEEeeCCCeEEEEECCCCe---eeEEecCCCCC--eEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEE--e---
Q psy6127 278 AIHASTKVDATLRYLSLHDNK---YVRYFPGHVRK--VSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMI--Q--- 346 (515)
Q Consensus 278 l~~~s~~~d~~v~vwd~~~~~---~~~~~~~h~~~--v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~--~--- 346 (515)
+++++ ..||.|++||.+... .+..++.|.+. |..+.+.+.|- .|++|+.||.|++||++.......+ .
T Consensus 1223 ~i~AG-faDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~ 1301 (1387)
T KOG1517|consen 1223 IIAAG-FADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHW 1301 (1387)
T ss_pred eEEEe-ecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecc
Confidence 44443 479999999987543 46778889887 99999998775 5999999999999999985332222 1
Q ss_pred -cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeee-cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 347 -LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK-CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 347 -~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
..+..+++..++....+|+|+. +.|+||++........+... ..+...+.+.+++|+|..-.+++|+.|.+|.+|..
T Consensus 1302 ~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1302 EYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred ccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence 1334889999999999999988 99999999875433322211 12344556789999999999999999999999987
Q ss_pred CCC
Q psy6127 425 FNG 427 (515)
Q Consensus 425 ~~~ 427 (515)
..+
T Consensus 1381 ~k~ 1383 (1387)
T KOG1517|consen 1381 EKP 1383 (1387)
T ss_pred CCc
Confidence 654
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-16 Score=162.41 Aligned_cols=256 Identities=16% Similarity=0.210 Sum_probs=183.1
Q ss_pred eeEeeeeccccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-------eeeeEecCCCCceeEEEEecCCCeEEEE
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQG-------TSKNTINSKKYGVDLIKFTHSKTTAIHA 281 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 281 (515)
.+..+..+..|...|..++.+++. .+++|||.||+|++||...- +...++......+.++.+.+.++.++++
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence 367788899999999999998854 99999999999999998641 2233444456789999999999998887
Q ss_pred EeeCCCeEEEEECCCC--e-----eeEEecCC-CCCeEEE-EEcCC-CC-EEEEEeCCCcEEEEEcCCCCeEEEE---ec
Q psy6127 282 STKVDATLRYLSLHDN--K-----YVRYFPGH-VRKVSSL-NLSPV-DD-SFISGSYDKTVRVWDLRQPNNVGMI---QL 347 (515)
Q Consensus 282 s~~~d~~v~vwd~~~~--~-----~~~~~~~h-~~~v~~l-~~~~~-~~-~l~s~s~dg~i~iwd~~~~~~~~~~---~~ 347 (515)
+ .||.|.+.+++.. + ..+....+ .+.+.++ +|... +. .++.+..-+.|..||++.......+ ..
T Consensus 1117 t--~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~ 1194 (1431)
T KOG1240|consen 1117 T--KDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR 1194 (1431)
T ss_pred c--CCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcc
Confidence 5 7999999998762 1 11222222 2333333 34332 33 6788888899999999987765554 23
Q ss_pred CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC---CEEEEEE--CCCcEEEE
Q psy6127 348 SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG---KLILVST--NGSIIRLF 422 (515)
Q Consensus 348 ~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~---~~l~~~s--~dg~i~iw 422 (515)
++.+++++.+|.+++++.|+..|.+.+||+|-.. +. .....++..+++.+..+|-. ...++++ ..+.+.+|
T Consensus 1195 hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~--~i--~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w 1270 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRV--PI--LSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTW 1270 (1431)
T ss_pred ccceeEEEecCCceEEEEecCCceEEEEEeecCc--ee--ecccCcccCCcceEEeeccCCCCceEEEecccCCCceeee
Confidence 4569999999999999999999999999999743 21 22233455778888887733 4555444 56789999
Q ss_pred ECCCCceeEEeecccc----------------CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 423 DAFNGNCVQSLSGVLN----------------NNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 423 d~~~~~~~~~~~~~~~----------------~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
++.+|.+...+..... ..-....+.+...+.++.+|+.|..|+.||...
T Consensus 1271 n~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1271 NMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred ecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence 9999987776654311 011123344444567899999999999999754
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.6e-17 Score=161.91 Aligned_cols=235 Identities=15% Similarity=0.184 Sum_probs=163.1
Q ss_pred CcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeeEecCCCCceeEEEEecC
Q psy6127 198 RTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD---DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 274 (515)
+..+++|| ..... .+.+..|...+.+.+|||||+.|+.++.+ ..|++||+.+++... +....+....++|+|+
T Consensus 183 ~~~i~i~d--~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-l~~~~g~~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVAD--YDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-VASFRGHNGAPAFSPD 258 (429)
T ss_pred eEEEEEEC--CCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE-EecCCCccCceeECCC
Confidence 45688887 33222 45677888899999999999999988754 479999998875432 2222223446899999
Q ss_pred CCeEEEEEeeCCCeE--EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCC-CeEEEEecCCC
Q psy6127 275 KTTAIHASTKVDATL--RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQP-NNVGMIQLSGN 350 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v--~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~-~~~~~~~~~~~ 350 (515)
|+.+++++ +.+|.+ ++||+.+++. ..+..+...+....|+|||+.|+.++ .++...+|++... .....+....
T Consensus 259 G~~La~~~-~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~- 335 (429)
T PRK01742 259 GSRLAFAS-SKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRG- 335 (429)
T ss_pred CCEEEEEE-ecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCC-
Confidence 99988875 356655 4557666654 45566777788999999999777655 5788888876542 2222332222
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC--CCCc
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA--FNGN 428 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~--~~~~ 428 (515)
....|+|+|+.+++.+.++ +.+||+.++... .+. ... ....+.|+|+|++|+.++.++...+|++ .+|+
T Consensus 336 -~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~---~lt--~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~ 406 (429)
T PRK01742 336 -YSAQISADGKTLVMINGDN-VVKQDLTSGSTE---VLS--STF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGR 406 (429)
T ss_pred -CCccCCCCCCEEEEEcCCC-EEEEECCCCCeE---Eec--CCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence 4578999999999887755 556898775421 111 111 1246789999999999999998888875 3677
Q ss_pred eeEEeeccccCCCCCEEEEEecC
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
..+.+..+.. .+...+|+|-
T Consensus 407 ~~~~l~~~~g---~~~~p~wsp~ 426 (429)
T PRK01742 407 FKARLPGSDG---QVKFPAWSPY 426 (429)
T ss_pred ceEEccCCCC---CCCCcccCCC
Confidence 7777765443 3677889874
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-16 Score=137.34 Aligned_cols=274 Identities=15% Similarity=0.196 Sum_probs=194.5
Q ss_pred CcEEEEEEcC--C-CCEEEEEeC----CCeEEEEECC--CCeeeeEe-cCCCCceeEEEEecCCCe---EEEEEeeCCCe
Q psy6127 222 DKINSLDYSS--D-GSLLISCSD----DDQIIIYDCE--QGTSKNTI-NSKKYGVDLIKFTHSKTT---AIHASTKVDAT 288 (515)
Q Consensus 222 ~~I~~l~~sp--d-~~~lasgs~----dg~i~iwd~~--~~~~~~~~-~~~~~~v~~~~~~~~~~~---l~~~s~~~d~~ 288 (515)
-.+.++.|+. + +.+||.||. .+.|.|-.+. +++.+..- ..|..+++.+.|.|+... -++++ .+..
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLAT--s~D~ 122 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLAT--SSDF 122 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhc--ccCe
Confidence 4577888873 2 347888874 3667766544 34433222 357889999999998742 12333 3678
Q ss_pred EEEEECCCCe--e--eEE-----ecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCe----EEEEecCCCeeEE
Q psy6127 289 LRYLSLHDNK--Y--VRY-----FPGHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLRQPNN----VGMIQLSGNKPIA 354 (515)
Q Consensus 289 v~vwd~~~~~--~--~~~-----~~~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~~~~ 354 (515)
+++|.+...+ . ... -..+..++++..|+.- -+++.++|-|-++.|||++++.. .+.+.|...+..+
T Consensus 123 LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DI 202 (364)
T KOG0290|consen 123 LRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDI 202 (364)
T ss_pred EEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEE
Confidence 9999987422 1 111 1346789999999874 45899999999999999999733 3445778889999
Q ss_pred EECCCC-CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEE-CCCcEEEEECCCC-cee
Q psy6127 355 AYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVST-NGSIIRLFDAFNG-NCV 430 (515)
Q Consensus 355 ~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s-~dg~i~iwd~~~~-~~~ 430 (515)
+|...+ +.||+.+.||.+|+||+|..+.. ..+........+...++|+++ -+++|+-. ....|.+.|++.. .++
T Consensus 203 af~~~s~~~FASvgaDGSvRmFDLR~leHS--TIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpv 280 (364)
T KOG0290|consen 203 AFLKGSRDVFASVGADGSVRMFDLRSLEHS--TIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPV 280 (364)
T ss_pred EeccCccceEEEecCCCcEEEEEecccccc--eEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcce
Confidence 999865 56889999999999999986532 122222232567789999985 45677654 4467999999864 566
Q ss_pred EEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeE------EEEEcCCCCCCeEEEEECC-CCCEEEEee
Q psy6127 431 QSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYK------VCVLDGDHPSAVQSLQFNP-KYHMLASAC 502 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~------~~~~~~~h~~~V~~l~~sp-~~~~las~~ 502 (515)
..+.+|.. .|+.++|.|.. ..++++++|..+.+||+.+--. +.... -.+.|+.+.|+| .+.+++.+.
T Consensus 281 a~L~~H~a---~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~--a~~EVNqi~Ws~~~~Dwiai~~ 355 (364)
T KOG0290|consen 281 ARLRNHQA---SVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT--AGGEVNQIQWSSSQPDWIAICF 355 (364)
T ss_pred ehhhcCcc---cccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh--ccceeeeeeecccCCCEEEEEe
Confidence 77777554 49999999964 6899999999999999975322 21222 457899999997 678898887
Q ss_pred CC
Q psy6127 503 SN 504 (515)
Q Consensus 503 ~d 504 (515)
++
T Consensus 356 ~k 357 (364)
T KOG0290|consen 356 GK 357 (364)
T ss_pred cC
Confidence 65
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=146.41 Aligned_cols=229 Identities=16% Similarity=0.212 Sum_probs=173.0
Q ss_pred EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-------eeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCC
Q psy6127 258 TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-------KYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDK 329 (515)
Q Consensus 258 ~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg 329 (515)
.+.+|+++|..++|+|.++.. +++|+.|.+|.||.+..+ +++..+.+|...|-.++|+|.- +.|++++.|.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~v-IASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCV-IASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CccCccccccccccCccCCce-eecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 467899999999999988765 466789999999998654 4567789999999999999975 4899999999
Q ss_pred cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-CCCCCcCeEEEEEcCCCC
Q psy6127 330 TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-PGERGCEWTGLKFSPDGK 408 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp~~~ 408 (515)
+|.+||+.+++.+-.+.|...+.+++|+.+|.++++.+.|..|+|||.+.+.. ... ..+....-..+.|-.+|.
T Consensus 155 ~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~-----v~e~~~heG~k~~Raifl~~g~ 229 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV-----VSEGVAHEGAKPARAIFLASGK 229 (472)
T ss_pred eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE-----eeecccccCCCcceeEEeccCc
Confidence 99999999999999999888899999999999999999999999999998652 221 222333445677888888
Q ss_pred EEEEEE---CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCCCeEE----EEEcC
Q psy6127 409 LILVST---NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIWNAERGYKV----CVLDG 480 (515)
Q Consensus 409 ~l~~~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~~~~~----~~~~~ 480 (515)
.+-+|- .+..+-+||..+-+..-.+.... ....|.---|.||.+.++.++ .|+.||.|.+....+. .++.
T Consensus 230 i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~- 307 (472)
T KOG0303|consen 230 IFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFS- 307 (472)
T ss_pred eeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccc-
Confidence 544443 56789999976654333332222 223366677888888776554 7899999999776532 2222
Q ss_pred CCCCCeEEEEECCCC
Q psy6127 481 DHPSAVQSLQFNPKY 495 (515)
Q Consensus 481 ~h~~~V~~l~~sp~~ 495 (515)
...+-..+.|-|..
T Consensus 308 -S~epQRG~g~mPKR 321 (472)
T KOG0303|consen 308 -SKEPQRGMGFMPKR 321 (472)
T ss_pred -cCCccccccccccc
Confidence 23445566776643
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-17 Score=141.80 Aligned_cols=285 Identities=16% Similarity=0.158 Sum_probs=193.7
Q ss_pred cccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeecc-ccCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy6127 167 SLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFR-ENTDKINSLDYSSDGSLLISCSDDDQI 245 (515)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~-~h~~~I~~l~~spd~~~lasgs~dg~i 245 (515)
.+.+|...+.++.|..+.. .+++...+++++|. ..+.+..-.++ .|...|+.+.--|+ ..|.+-+.|+.+
T Consensus 9 vLRp~~~~v~s~~fqa~~r------L~sg~~~G~V~~w~--lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L 79 (323)
T KOG0322|consen 9 VLRPHSSSVTSVLFQANER------LMSGLSVGIVKMWV--LQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLL 79 (323)
T ss_pred Eeccccchheehhhccchh------hhcccccceEEEEE--eecCccchhhhhhccceeeceeecCC-cchhhcCCCceE
Confidence 3445655555555554442 24889999999999 88888777888 67889999999987 467888999999
Q ss_pred EEEECCCCeeeeEecCCCCceeEEEEecCC-----C---eEEEE-EeeCCCeEEEEECCCCeeeEEe----cCCCCCeEE
Q psy6127 246 IIYDCEQGTSKNTINSKKYGVDLIKFTHSK-----T---TAIHA-STKVDATLRYLSLHDNKYVRYF----PGHVRKVSS 312 (515)
Q Consensus 246 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-----~---~l~~~-s~~~d~~v~vwd~~~~~~~~~~----~~h~~~v~~ 312 (515)
.+|++.-+..+.. |.-.++++.|.+.. + .+... +-+.|. +.+-|......+... .+..+.+.+
T Consensus 80 ~lw~ia~s~~i~i---~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde-~h~~D~g~~tqv~i~dd~~~~Klgsvmc 155 (323)
T KOG0322|consen 80 ILWTIAYSAFISI---HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDE-THKQDGGDTTQVQIADDSERSKLGSVMC 155 (323)
T ss_pred EEEEccCcceEEE---eeeeccccccccceeccCCCcchhheecCCcccch-hhhhccCccceeEccCchhccccCceee
Confidence 9999986543322 23334444443321 1 01111 000011 222222211122221 134466777
Q ss_pred EEEcCC-CC--EEEEEeCCCcEEEEEcCCCCeEEEE-----------ecCCCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 313 LNLSPV-DD--SFISGSYDKTVRVWDLRQPNNVGMI-----------QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 313 l~~~~~-~~--~l~s~s~dg~i~iwd~~~~~~~~~~-----------~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
..+..+ +. ++++|-.+|.+.+||+.++..+-.+ .+..++.++.+.+.-..=++|+.+..+..|+++
T Consensus 156 ~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~ 235 (323)
T KOG0322|consen 156 QDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLN 235 (323)
T ss_pred eeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeec
Confidence 775433 33 5677888999999999997443332 345667888888776666778888899999887
Q ss_pred cCCCC-CceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 379 SYDKG-PFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 379 ~~~~~-~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
..... +..... .-.+..+..+..-||++.+++++-|+.||+|..++.+++..+.-|... |.+++|+|+...+|+
T Consensus 236 ~s~gslq~~~e~--~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsag---vn~vAfspd~~lmAa 310 (323)
T KOG0322|consen 236 HSTGSLQIRKEI--TLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAG---VNAVAFSPDCELMAA 310 (323)
T ss_pred cccCcccccceE--EecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcc---eeEEEeCCCCchhhh
Confidence 54211 111111 122335678999999999999999999999999999999999886644 999999999999999
Q ss_pred EeCCCcEEEEEC
Q psy6127 458 GSTDGQVHIWNA 469 (515)
Q Consensus 458 gs~dg~I~iwd~ 469 (515)
++.|++|.+|++
T Consensus 311 askD~rISLWkL 322 (323)
T KOG0322|consen 311 ASKDARISLWKL 322 (323)
T ss_pred ccCCceEEeeec
Confidence 999999999986
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-15 Score=136.96 Aligned_cols=288 Identities=15% Similarity=0.161 Sum_probs=205.3
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCCEEEE-EeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLIS-CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~~las-gs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
..+.+..+.|.. -+.|.-+.|..|..++++ ...|+.|.+|++...+-...+.....++..++|+|+|..++..+ ..+
T Consensus 36 ~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~ts-eF~ 113 (447)
T KOG4497|consen 36 SETLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTS-EFD 113 (447)
T ss_pred cchhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeee-cce
Confidence 334444444333 467888899998876554 46788999999998888888888889999999999999888777 689
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC------------------------------------CCc
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY------------------------------------DKT 330 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~------------------------------------dg~ 330 (515)
-.|.+|.+.+.+.... +-....+..++|+|||++.+.+++ +..
T Consensus 114 lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~ 192 (447)
T KOG4497|consen 114 LRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNW 192 (447)
T ss_pred eEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcE
Confidence 9999999988765432 223345688999999987766553 223
Q ss_pred EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCC-----------------------------
Q psy6127 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD----------------------------- 381 (515)
Q Consensus 331 i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~----------------------------- 381 (515)
+.+||.--.-.+..+...-.+..++|+|.++++++|+.|+.+|+.+--+.+
T Consensus 193 laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql 272 (447)
T KOG4497|consen 193 LAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQL 272 (447)
T ss_pred EEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhh
Confidence 455554333333334444558889999999999999999999876532100
Q ss_pred -------------------C-------CCceeee------cCCCCCcCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCC
Q psy6127 382 -------------------K-------GPFASFK------CPGERGCEWTGLKFSPDGKLILVSTN--GSIIRLFDAFNG 427 (515)
Q Consensus 382 -------------------~-------~~~~~~~------~~~~~~~~i~~l~~sp~~~~l~~~s~--dg~i~iwd~~~~ 427 (515)
. .....+. -.......+.-++|++|..|+++-.. -+.+.+||++..
T Consensus 273 ~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l 352 (447)
T KOG4497|consen 273 LHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNL 352 (447)
T ss_pred cccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhh
Confidence 0 0000000 01122345667999999999887653 357999999887
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
+....+.. ..+|....|+|....|+.+.....+++|...-...+..- . ..-.|..+.|.-+|..++-.+.|
T Consensus 353 ~l~avLiQ----k~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP-~-~GF~i~~l~W~~~g~~i~l~~kD 423 (447)
T KOG4497|consen 353 KLHAVLIQ----KHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVP-K-KGFNIQKLQWLQPGEFIVLCGKD 423 (447)
T ss_pred hhhhhhhh----ccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecC-C-CCceeeeEEecCCCcEEEEEcCC
Confidence 66554442 334899999999988888888888999998654444433 3 44679999999999999999987
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-15 Score=152.07 Aligned_cols=239 Identities=13% Similarity=0.150 Sum_probs=164.9
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe-eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST-KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~-~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
..|.+||..... .+.+..+...+...+|+|||+.+++++. +.+..+.+||+.+++.... ....+.+...+|+|||+.
T Consensus 179 ~~l~~~d~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~ 256 (429)
T PRK03629 179 YELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSK 256 (429)
T ss_pred eeEEEEcCCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCE
Confidence 378899987443 3445556678999999999999987753 2245799999988864332 223333556899999998
Q ss_pred EEEE-eCCC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC-CcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 322 FISG-SYDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS-DSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 322 l~s~-s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
|+.. +.+| .|.+||+++++...............|+|+|+.|+..+.+ +...+|.+...... ...+.. ....
T Consensus 257 La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~-~~~lt~---~~~~ 332 (429)
T PRK03629 257 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA-PQRITW---EGSQ 332 (429)
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC-eEEeec---CCCC
Confidence 8765 4454 5889999988776655555557789999999999887754 45566644322111 112211 2223
Q ss_pred eEEEEEcCCCCEEEEEECC---CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCc---EEEEECCC
Q psy6127 398 WTGLKFSPDGKLILVSTNG---SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ---VHIWNAER 471 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~---I~iwd~~~ 471 (515)
.....|+|||++++..+.+ ..|.+||+.+++.. .+.... ......|+|||++|+.++.++. +.++++ +
T Consensus 333 ~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~----~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~ 406 (429)
T PRK03629 333 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTF----LDETPSIAPNGTMVIYSSSQGMGSVLNLVST-D 406 (429)
T ss_pred ccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCC----CCCCceECCCCCEEEEEEcCCCceEEEEEEC-C
Confidence 4578999999999876643 35888999888643 333211 1346789999999999887764 677787 4
Q ss_pred CeEEEEEcCCCCCCeEEEEECCC
Q psy6127 472 GYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 472 ~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
|.....+.. |.+.+...+|+|-
T Consensus 407 G~~~~~l~~-~~~~~~~p~Wsp~ 428 (429)
T PRK03629 407 GRFKARLPA-TDGQVKFPAWSPY 428 (429)
T ss_pred CCCeEECcc-CCCCcCCcccCCC
Confidence 666666776 8888999999983
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-15 Score=130.93 Aligned_cols=236 Identities=18% Similarity=0.267 Sum_probs=166.7
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee------eeEe--cCC-----CCceeEEEEecCCCeEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS------KNTI--NSK-----KYGVDLIKFTHSKTTAIH 280 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~------~~~~--~~~-----~~~v~~~~~~~~~~~l~~ 280 (515)
+-.+++|.++|+.++|. ..+|++|+ ||.|+-|....... .... +.+ -..|+++...|..+.+++
T Consensus 55 iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~ 131 (325)
T KOG0649|consen 55 IVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILF 131 (325)
T ss_pred eeeccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEE
Confidence 34458999999999998 34777776 59999998764322 1111 111 246889999999999988
Q ss_pred EEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC---------Ce
Q psy6127 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG---------NK 351 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---------~~ 351 (515)
++ .|+.++-||+++|+..+.++||++.|.++.--.....+++|+.||++++||.++++++.++.... ..
T Consensus 132 Ag--GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~ 209 (325)
T KOG0649|consen 132 AG--GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGK 209 (325)
T ss_pred ec--CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCc
Confidence 87 49999999999999999999999999999986667789999999999999999999998874322 12
Q ss_pred eEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE
Q psy6127 352 PIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ 431 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~ 431 (515)
...++.-+..++++|+ ...+.+|.++..+.. ..+. ....+..+.|.. +.+++++..+.+.-|.+. |....
T Consensus 210 wigala~~edWlvCGg-Gp~lslwhLrsse~t--~vfp----ipa~v~~v~F~~--d~vl~~G~g~~v~~~~l~-Gvl~a 279 (325)
T KOG0649|consen 210 WIGALAVNEDWLVCGG-GPKLSLWHLRSSEST--CVFP----IPARVHLVDFVD--DCVLIGGEGNHVQSYTLN-GVLQA 279 (325)
T ss_pred eeEEEeccCceEEecC-CCceeEEeccCCCce--EEEe----cccceeEeeeec--ceEEEeccccceeeeeec-cEEEE
Confidence 3356666778888874 568999999985532 2222 223455677754 477888888889888763 43333
Q ss_pred EeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEE
Q psy6127 432 SLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIW 467 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iw 467 (515)
..+... ....+..|+... +++-.++..+.+.|+
T Consensus 280 ~ip~~s---~~c~s~s~~~~p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 280 NIPVES---TACYSASWQTSPIKFISIAGFSNKLHIL 313 (325)
T ss_pred eccCCc---cceeeecccCCceEEEEecccceeeeee
Confidence 333211 114445554333 455555666666665
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=7e-17 Score=149.71 Aligned_cols=195 Identities=17% Similarity=0.139 Sum_probs=156.6
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec
Q psy6127 225 NSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 225 ~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~ 304 (515)
.+++|+++|..|++|+.||++|+|+..+...+.....|...|.++.|+||++.+++.+ .| ..+||+.+++.++....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig--~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIG--AD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEec--CC-ceEEEEeccCchhhhcC
Confidence 7899999999999999999999999988888888888999999999999999998887 36 99999999997776654
Q ss_pred --CCCCCeEEEEEcCCC---C--EEEEEeCCCcEEEEEcCCCCe------EEEEecCCCeeEEEECCCCCEEEEEECCCc
Q psy6127 305 --GHVRKVSSLNLSPVD---D--SFISGSYDKTVRVWDLRQPNN------VGMIQLSGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 305 --~h~~~v~~l~~~~~~---~--~l~s~s~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
..+.....+.|+.|+ . .++....-+.|+.||+..... .+.......+.+++++++|++++.|+.||.
T Consensus 225 ~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGs 304 (398)
T KOG0771|consen 225 PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGS 304 (398)
T ss_pred CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCc
Confidence 233456778888877 3 333334456677776643222 122233446999999999999999999999
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~ 426 (515)
|.+++..+.+ .....+..|...|+.+.|+|+.+++++.+.+..+.+..+.-
T Consensus 305 Vai~~~~~lq----~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 305 VAIYDAKSLQ----RLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEEEeceee----eeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 9999998765 23344678889999999999999999999998888877643
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-15 Score=131.06 Aligned_cols=242 Identities=14% Similarity=0.166 Sum_probs=161.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
..|.+-+++|.+++|+.|+.+|+|.+..+++-.. .+ + -| .....+.
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s------~s------a-~~---------------------~gk~~iv 56 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDS------GS------A-EP---------------------PGKLKIV 56 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhc------cc------c-CC---------------------CCCccee
Confidence 3466678999999999999999999998763110 00 0 00 0111122
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC---------------eEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN---------------NVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~---------------~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
..++|.++|..++|. ..+|++|+ ||.|+-|..+... .......+ .++.+.+.|..+-++++
T Consensus 57 ~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evP-eINam~ldP~enSi~~A 132 (325)
T KOG0649|consen 57 PEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVP-EINAMWLDPSENSILFA 132 (325)
T ss_pred eccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCC-ccceeEeccCCCcEEEe
Confidence 234566666666665 33444443 3666555443221 11111222 37788899988888887
Q ss_pred ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCC-----
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA----- 441 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~----- 441 (515)
+.|+.++-||+++++ ......+|...+.++.--.....+++|++||++++||.++++++..+........
T Consensus 133 gGD~~~y~~dlE~G~-----i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~ 207 (325)
T KOG0649|consen 133 GGDGVIYQVDLEDGR-----IQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDW 207 (325)
T ss_pred cCCeEEEEEEecCCE-----EEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCccc
Confidence 899999999999876 5555678888998988855556788999999999999999999988875543211
Q ss_pred CCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC-CEEEEcC
Q psy6127 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS-NMAFWIP 510 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~-dv~iW~~ 510 (515)
.-+-.+..-+..++++|+ ...+.+|+++..++...++ ..++|..+.|..| .+++.|-+ .+.-|.+
T Consensus 208 g~wigala~~edWlvCGg-Gp~lslwhLrsse~t~vfp--ipa~v~~v~F~~d-~vl~~G~g~~v~~~~l 273 (325)
T KOG0649|consen 208 GKWIGALAVNEDWLVCGG-GPKLSLWHLRSSESTCVFP--IPARVHLVDFVDD-CVLIGGEGNHVQSYTL 273 (325)
T ss_pred CceeEEEeccCceEEecC-CCceeEEeccCCCceEEEe--cccceeEeeeecc-eEEEeccccceeeeee
Confidence 112244445677888775 4569999999999998887 5678888988876 34444423 3666654
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-15 Score=136.57 Aligned_cols=236 Identities=14% Similarity=0.208 Sum_probs=180.8
Q ss_pred ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe---eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy6127 259 INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK---YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335 (515)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd 335 (515)
+..-..+|+|.+|++|+..+++.. ....|.||.....+ ..+++..|...|+.++|+|..+.|++++.|..-++|.
T Consensus 6 ~~~~~~pitchAwn~drt~iAv~~--~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~ 83 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRTQIAVSP--NNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT 83 (361)
T ss_pred eeeccCceeeeeecCCCceEEecc--CCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence 333457899999999999888765 57789999876654 6788999999999999999999999999999999999
Q ss_pred c-CCCCeEE---EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 336 L-RQPNNVG---MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 336 ~-~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
. ..++... .+.++....++.|+|.++.|++|+....|.+|-++..+ .-...........+.|+++.|+|++-.++
T Consensus 84 ~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~EN-dWWVsKhikkPirStv~sldWhpnnVLla 162 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEN-DWWVSKHIKKPIRSTVTSLDWHPNNVLLA 162 (361)
T ss_pred cCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEeccc-ceehhhhhCCccccceeeeeccCCcceec
Confidence 8 4444333 34777889999999999999999999999999887633 11111223345677899999999999999
Q ss_pred EEECCCcEEEEECC-----C-------------CceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy6127 412 VSTNGSIIRLFDAF-----N-------------GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 412 ~~s~dg~i~iwd~~-----~-------------~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
+|+.|+..+++..- . |+.+.++. ...+.+..+.|+|+|..|+-.+.|+.+.+-|.....
T Consensus 163 aGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~---~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 163 AGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS---SSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred ccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc---cCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 99999999999742 1 11111221 234568999999999999999999999999987664
Q ss_pred -EEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 474 -KVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 474 -~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
.+..... ..-+..++.|-.+...++.|
T Consensus 240 ~~v~~~~~-~~lP~ls~~~ise~~vv~ag 267 (361)
T KOG1523|consen 240 ERVQSVAT-AQLPLLSVSWISENSVVAAG 267 (361)
T ss_pred hhccchhh-ccCCceeeEeecCCceeecC
Confidence 3333433 23677788887765555544
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.9e-16 Score=135.53 Aligned_cols=235 Identities=14% Similarity=0.162 Sum_probs=171.8
Q ss_pred cccCCcEEEEEEcCCC-----CEEEEEeCCCeEEEEECCCCeee----eEe-----cCCCCceeEEEEecCCCeEEEEEe
Q psy6127 218 RENTDKINSLDYSSDG-----SLLISCSDDDQIIIYDCEQGTSK----NTI-----NSKKYGVDLIKFTHSKTTAIHAST 283 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~-----~~lasgs~dg~i~iwd~~~~~~~----~~~-----~~~~~~v~~~~~~~~~~~l~~~s~ 283 (515)
..|.-+++.+.|.|+. ++|||++ ..+|+|.+...+.. ..+ ..+..++++..|+.-...++..+
T Consensus 93 fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtS- 169 (364)
T KOG0290|consen 93 FDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTS- 169 (364)
T ss_pred CCCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEee-
Confidence 4788999999999976 3577665 37999998742211 111 23457899999998777666555
Q ss_pred eCCCeEEEEECCCCee---eEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEec----CCCeeEEE
Q psy6127 284 KVDATLRYLSLHDNKY---VRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQL----SGNKPIAA 355 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~ 355 (515)
+-|-+..|||++++.. ...+..|..+|..++|...+. .|++.|.||.||+||++..+-...+-. +.+...++
T Consensus 170 SiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLs 249 (364)
T KOG0290|consen 170 SIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLS 249 (364)
T ss_pred cccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeec
Confidence 6899999999998733 566788999999999998654 899999999999999998776554421 23345677
Q ss_pred ECC-CCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCce--e
Q psy6127 356 YDP-EGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGNC--V 430 (515)
Q Consensus 356 ~s~-~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~~~~--~ 430 (515)
|++ |.+++|+-. ....|.+.|+|... ..+.....|...|++++|.|. ...|.+++.|..+.+||+...-. .
T Consensus 250 wnkqDpnymATf~~dS~~V~iLDiR~P~----tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~ 325 (364)
T KOG0290|consen 250 WNKQDPNYMATFAMDSNKVVILDIRVPC----TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENG 325 (364)
T ss_pred cCcCCchHHhhhhcCCceEEEEEecCCC----cceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCC
Confidence 777 446666644 45679999999854 344556789999999999995 46899999999999999875322 1
Q ss_pred -EEeeccccCCCCCEEEEEec-CCCEEEEEeC
Q psy6127 431 -QSLSGVLNNNASPLEATFTP-DSQFVASGST 460 (515)
Q Consensus 431 -~~~~~~~~~~~~i~~~~~sp-~g~~l~sgs~ 460 (515)
..+.... ....|..+.|+| .+.+++.+..
T Consensus 326 ~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 326 EDPILAYT-AGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred CCchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence 1111111 344589999996 4678887753
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-16 Score=142.02 Aligned_cols=276 Identities=12% Similarity=0.132 Sum_probs=196.7
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
..+|++-..|.| +++|..+++.+..++++...+..+.|....... ...+++.|+.|++|| ++...
T Consensus 41 ~~vav~lSngsv----------~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h---~v~s~ssDG~Vr~wD--~Rs~~ 105 (376)
T KOG1188|consen 41 TAVAVSLSNGSV----------RLYDKGTGQLLEEFKGPPATTNGVRFISCDSPH---GVISCSSDGTVRLWD--IRSQA 105 (376)
T ss_pred eeEEEEecCCeE----------EEEeccchhhhheecCCCCcccceEEecCCCCC---eeEEeccCCeEEEEE--eecch
Confidence 468888888888 999999999999999986644444444322111 345899999999999 55543
Q ss_pred --eeeeccccC-CcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCee-eeE-ecCCCCceeEEEEecCCCeEEEEEe
Q psy6127 213 --VAKVFRENT-DKINSLDYSSDGSLLISCSD----DDQIIIYDCEQGTS-KNT-INSKKYGVDLIKFTHSKTTAIHAST 283 (515)
Q Consensus 213 --~~~~~~~h~-~~I~~l~~spd~~~lasgs~----dg~i~iwd~~~~~~-~~~-~~~~~~~v~~~~~~~~~~~l~~~s~ 283 (515)
....+.+|. .+..|++.+-.++.+++|.. |-.|.+||++..+. +.. ...|...|+++.|+|....+++ +|
T Consensus 106 e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLl-SG 184 (376)
T KOG1188|consen 106 ESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLL-SG 184 (376)
T ss_pred hhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEE-ee
Confidence 445566776 67788888878888888863 57899999997665 443 4689999999999999877665 44
Q ss_pred eCCCeEEEEECCCCee---eEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCeEEEEecCCC---------
Q psy6127 284 KVDATLRYLSLHDNKY---VRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNNVGMIQLSGN--------- 350 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--------- 350 (515)
+.||-|.++|+..... +.....|...|.++.|..++ +.|.+-+..++..+|+++.+.+...+..+.-
T Consensus 185 SvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~ 264 (376)
T KOG1188|consen 185 SVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKED 264 (376)
T ss_pred cccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhh
Confidence 7899999999875432 22233477889999999876 3688889999999999999886655533210
Q ss_pred --eeEE-EECC-CCCEEEEEEC-CCcEEEEEeecCCC--CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 351 --KPIA-AYDP-EGLAFAIGVN-SDSIKLYDVRSYDK--GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 351 --~~~~-~~s~-~~~~l~~g~~-dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
-..+ +.+| +...++.++. .+...++-+..... .........++|...|+++.|...+..+++|++||.+.+|.
T Consensus 265 ~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk 344 (376)
T KOG1188|consen 265 NCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK 344 (376)
T ss_pred hhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence 0011 2234 3344444443 67777776653211 11122233456777889999999999999999999999998
Q ss_pred C
Q psy6127 424 A 424 (515)
Q Consensus 424 ~ 424 (515)
.
T Consensus 345 ~ 345 (376)
T KOG1188|consen 345 V 345 (376)
T ss_pred c
Confidence 5
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-14 Score=132.64 Aligned_cols=237 Identities=15% Similarity=0.209 Sum_probs=169.9
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCCe
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK--TVRVWDLRQPNN 341 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg--~i~iwd~~~~~~ 341 (515)
..+..+.|+.+...+.+++ .|| .++++.+..............|..+-|+ ..++|..+.+. .+++++.+.+..
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs--~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~ 80 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGS--KDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTT 80 (391)
T ss_pred cceeeeeeccceeEEEccC--CCc-eeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCce
Confidence 4456666777665444443 444 5677665543322222223345666676 55666655543 499999999999
Q ss_pred EEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE--CCCcE
Q psy6127 342 VGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST--NGSII 419 (515)
Q Consensus 342 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s--~dg~i 419 (515)
+..+..+.++-++.++. +.|+++-.+ .|+|||+++.+ ....+.....+...+.++++++.+.|++.-+ ..|.|
T Consensus 81 ICe~~fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~Mk--lLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV 155 (391)
T KOG2110|consen 81 ICEIFFPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMK--LLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDV 155 (391)
T ss_pred EEEEecCCceEEEEEcc--ceEEEEEcc-cEEEEecccce--eehhhhccCCCccceEeeccCCCCceEEecCCCCCceE
Confidence 99888888888888854 456655444 49999999854 2222222333444566666677777888643 56899
Q ss_pred EEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCc-EEEEECCCCeEEEEEcCC-CCCCeEEEEECCCCCE
Q psy6127 420 RLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ-VHIWNAERGYKVCVLDGD-HPSAVQSLQFNPKYHM 497 (515)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~ 497 (515)
.+||..+-+....+..|.+. +.+++|+++|.+||++++.|+ |||+.+.+|+.+..++.+ -...|.+++|+|++++
T Consensus 156 ~l~d~~nl~~v~~I~aH~~~---lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~ 232 (391)
T KOG2110|consen 156 VLFDTINLQPVNTINAHKGP---LAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQF 232 (391)
T ss_pred EEEEcccceeeeEEEecCCc---eeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCe
Confidence 99999999999999876554 999999999999999999997 799999999999999862 2346889999999999
Q ss_pred EEEeeCC--EEEEcCCCC
Q psy6127 498 LASACSN--MAFWIPTLS 513 (515)
Q Consensus 498 las~~~d--v~iW~~~~~ 513 (515)
|++.+.+ |.|+.++..
T Consensus 233 L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 233 LAASSNTETVHIFKLEKV 250 (391)
T ss_pred EEEecCCCeEEEEEeccc
Confidence 9988754 999988653
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.6e-15 Score=132.88 Aligned_cols=210 Identities=16% Similarity=0.234 Sum_probs=168.3
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG---TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
+.--..+|+|.+|++|+..+|.+.....|.||..... +..+++..|...|++++|+|..+.++.++ .|..-++|.
T Consensus 6 ~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs--~drnayVw~ 83 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCS--HDRNAYVWT 83 (361)
T ss_pred eeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEcc--CCCCccccc
Confidence 3334678999999999999999999999999988754 46788999999999999999999998776 799999999
Q ss_pred C-CCCe--eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE-----EEecCCCeeEEEECCCCCEEEE
Q psy6127 294 L-HDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG-----MIQLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 294 ~-~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~s~~~~~l~~ 365 (515)
. ..++ +.-.+..++...+++.|+|.++.|++||....|.+|-.+..+.-- ..+....+.++.|+|++-++++
T Consensus 84 ~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa 163 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA 163 (361)
T ss_pred cCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence 8 4443 344556789999999999999999999999999999887655431 1244556899999999999999
Q ss_pred EECCCcEEEEEeecCC------------CCCceeeec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy6127 366 GVNSDSIKLYDVRSYD------------KGPFASFKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~------------~~~~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
|+.|+..++|..--.. +.++-.+.. .....+.+..+.|+|+|..|+-.+.|..+.+-|.....
T Consensus 164 Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 164 GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 9999999999753211 111111111 12556788999999999999999999999999876553
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-15 Score=152.05 Aligned_cols=260 Identities=14% Similarity=0.185 Sum_probs=182.1
Q ss_pred EEEEccceeeee-EeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCee--eeE----ecCCCCceeEEEE
Q psy6127 200 ITKCSENLVRSY-RVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTS--KNT----INSKKYGVDLIKF 271 (515)
Q Consensus 200 ~i~~wd~~~~~~-~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~--~~~----~~~~~~~v~~~~~ 271 (515)
.+-+|+ ++.- .+...+. -...|+|++|+| +..++|.|..+|.|.+||+..+.. ... ...|..++..+.|
T Consensus 223 ~~~vW~--~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW 299 (555)
T KOG1587|consen 223 VLLVWS--LKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW 299 (555)
T ss_pred eEEEEe--cCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence 566777 3322 3333333 367899999999 677888999999999999987655 222 3467889999999
Q ss_pred ecCCCe--EEEEEeeCCCeEEEEECCCCeee------EEec------CCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEc
Q psy6127 272 THSKTT--AIHASTKVDATLRYLSLHDNKYV------RYFP------GHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDL 336 (515)
Q Consensus 272 ~~~~~~--l~~~s~~~d~~v~vwd~~~~~~~------~~~~------~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~ 336 (515)
..+... ++.++ .||.|..|+++.-... .... .-...+++++|.+... .++.|+.+|.|.-=+-
T Consensus 300 ~~~~~~~~f~s~s--sDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r 377 (555)
T KOG1587|consen 300 LQNEHNTEFFSLS--SDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCR 377 (555)
T ss_pred eccCCCCceEEEe--cCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEec
Confidence 876555 55554 6999999987643321 1111 1234688999988654 7899999998876332
Q ss_pred ---CCCC-----eE-EEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC
Q psy6127 337 ---RQPN-----NV-GMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG 407 (515)
Q Consensus 337 ---~~~~-----~~-~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~ 407 (515)
+... .. ....+.+.+.++.++|-+..++..+.|.+++||....... .+.....+...+++++|||..
T Consensus 378 ~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~----Pl~~~~~~~~~v~~vaWSptr 453 (555)
T KOG1587|consen 378 KGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIAS----PLLSLDSSPDYVTDVAWSPTR 453 (555)
T ss_pred cCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCC----cchhhhhccceeeeeEEcCcC
Confidence 2222 11 1224556789999999877766666699999999873221 222233445569999999975
Q ss_pred C-EEEEEECCCcEEEEECCCCc--eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 408 K-LILVSTNGSIIRLFDAFNGN--CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 408 ~-~l~~~s~dg~i~iwd~~~~~--~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
. .++++..||.+.+||+.... ++...... ....+.+.|++.|+.|++|...|.+.+|++..
T Consensus 454 pavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~---~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 454 PAVFATVDGDGNLDIWDLLQDDEEPVLSQKVC---SPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred ceEEEEEcCCCceehhhhhccccCCccccccc---ccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 4 66777789999999987543 33333222 33467888999999999999999999999864
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-14 Score=140.53 Aligned_cols=307 Identities=15% Similarity=0.180 Sum_probs=196.2
Q ss_pred CCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCC
Q psy6127 196 SSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 275 (515)
.+++.+.+.| ..+.+.+.++......-..+.|+|||+++++++.||.|.++|+.+++.+.+++... ....++++++|
T Consensus 13 ~~~~~v~viD--~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG 89 (369)
T PF02239_consen 13 RGSGSVAVID--GATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDG 89 (369)
T ss_dssp GGGTEEEEEE--TTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TT
T ss_pred cCCCEEEEEE--CCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCC
Confidence 3445566666 55677777777655554567899999999999999999999999999999998754 46889999999
Q ss_pred CeEEEEEeeCCCeEEEEECCCCeeeEEecC-------CCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeE--EEE
Q psy6127 276 TTAIHASTKVDATLRYLSLHDNKYVRYFPG-------HVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNV--GMI 345 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~-------h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~--~~~ 345 (515)
++++++. ...+.+.++|.++.+.++.+.. ....+..+..+|....++..-. .+.|.+.|....+.. ..+
T Consensus 90 ~~~~v~n-~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i 168 (369)
T PF02239_consen 90 KYVYVAN-YEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTI 168 (369)
T ss_dssp TEEEEEE-EETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEE
T ss_pred CEEEEEe-cCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeee
Confidence 9988776 4699999999999998887643 2346788888898886665555 488888898776544 344
Q ss_pred ecCCCeeEEEECCCCCEEEEE-ECCCcEEEEEeecCCCCCceeeec-CCCCCcCeEEE-------EEcC--CCCEEEEEE
Q psy6127 346 QLSGNKPIAAYDPEGLAFAIG-VNSDSIKLYDVRSYDKGPFASFKC-PGERGCEWTGL-------KFSP--DGKLILVST 414 (515)
Q Consensus 346 ~~~~~~~~~~~s~~~~~l~~g-~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l-------~~sp--~~~~l~~~s 414 (515)
..........|+|++++++++ ..++.+.++|..+... ...+.. ...|..+...+ .|.. .+...++.-
T Consensus 169 ~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~--v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~i 246 (369)
T PF02239_consen 169 KVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKL--VALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLI 246 (369)
T ss_dssp E--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEE--EEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEE
T ss_pred cccccccccccCcccceeeecccccceeEEEeeccceE--EEEeeccccccccccccccCCCcceEEeeccccceecccc
Confidence 556667889999999988775 4567888898776431 111111 11222222221 1211 122222222
Q ss_pred CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE----eCCCcEEEEECCCCeEEEEEcCCCCCCeEEEE
Q psy6127 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG----STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQ 490 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg----s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 490 (515)
....+.+||..+.+.++.+..... ...+..+|+++++++. ...+.|.++|.++.+.+..+.......+..+.
T Consensus 247 g~~~v~v~d~~~wkvv~~I~~~G~----glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~e 322 (369)
T PF02239_consen 247 GTDPVSVHDDYAWKVVKTIPTQGG----GLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHME 322 (369)
T ss_dssp E--TTT-STTTBTSEEEEEE-SSS----S--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEE
T ss_pred cCCccccchhhcCeEEEEEECCCC----cceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccE
Confidence 233566788889999999886432 3678889999999988 44589999999999888887642233599999
Q ss_pred ECCCCCEEEEee--C--CEEEEcCCC
Q psy6127 491 FNPKYHMLASAC--S--NMAFWIPTL 512 (515)
Q Consensus 491 ~sp~~~~las~~--~--dv~iW~~~~ 512 (515)
|+++|+.+..+. + .+.++|..+
T Consensus 323 f~~dG~~v~vS~~~~~~~i~v~D~~T 348 (369)
T PF02239_consen 323 FNPDGKEVWVSVWDGNGAIVVYDAKT 348 (369)
T ss_dssp E-TTSSEEEEEEE--TTEEEEEETTT
T ss_pred ECCCCCEEEEEEecCCCEEEEEECCC
Confidence 999999776654 2 388887654
|
... |
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.3e-16 Score=145.29 Aligned_cols=200 Identities=19% Similarity=0.225 Sum_probs=158.0
Q ss_pred eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe
Q psy6127 267 DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ 346 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 346 (515)
.+++|+++|..+.++. .||++|+|++.+...+.....|.+.|.++.|+|||++|++-+.| ..+||+.+++..+....
T Consensus 148 k~vaf~~~gs~latgg--~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGG--TDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeecc--ccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 7899999998777654 79999999988888888888899999999999999999999999 99999999997766654
Q ss_pred cC---CCeeEEEECCCC---C--EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCc
Q psy6127 347 LS---GNKPIAAYDPEG---L--AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418 (515)
Q Consensus 347 ~~---~~~~~~~~s~~~---~--~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~ 418 (515)
.. .....+.|+.++ . .++.....+.|+.||+....................|++++.+++|++++.|+.||.
T Consensus 225 ~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGs 304 (398)
T KOG0771|consen 225 PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGS 304 (398)
T ss_pred CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCc
Confidence 22 224456777766 2 333334567788888877654322233333334457899999999999999999999
Q ss_pred EEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 419 IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 419 i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
|.+++..+.++++..+. .|...|+.+.|+||.+++++.+.|....+..+.-
T Consensus 305 Vai~~~~~lq~~~~vk~--aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 305 VAIYDAKSLQRLQYVKE--AHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEEEeceeeeeEeehh--hheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 99999988887766653 3445699999999999999999999888877654
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-14 Score=132.36 Aligned_cols=271 Identities=16% Similarity=0.251 Sum_probs=180.5
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC--
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-- 297 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-- 297 (515)
+-.+..++|++.-..+|++..|-.|++||-.. ++...++. ....|+|++|-|.+...+.+++ .+.|.+|.....
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgC--r~gIciW~~s~tln 174 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGC--RAGICIWSDSRTLN 174 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeee--cceeEEEEcCcccc
Confidence 34567888998777789999999999999776 55445543 3467999999998766555443 778999986432
Q ss_pred --ee----------eEEecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEE
Q psy6127 298 --KY----------VRYFPGHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAF 363 (515)
Q Consensus 298 --~~----------~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l 363 (515)
+. +...++| .+|++++|++||..+++++. |..|.|||..++..+... ...+.+.-+.|||||.++
T Consensus 175 ~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~l 253 (445)
T KOG2139|consen 175 ANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVL 253 (445)
T ss_pred cccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEE
Confidence 11 1223455 68999999999999999885 678999999999887766 344557889999999999
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-Cce-------------
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-GNC------------- 429 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-~~~------------- 429 (515)
.+++-|+..++|+....-. ..+.. ...+.|...+|+|+|++|+.+... .-++|.+.- +++
T Consensus 254 faAt~davfrlw~e~q~wt----~erw~-lgsgrvqtacWspcGsfLLf~~sg-sp~lysl~f~~~~~~~~~~~~~k~~l 327 (445)
T KOG2139|consen 254 FAATCDAVFRLWQENQSWT----KERWI-LGSGRVQTACWSPCGSFLLFACSG-SPRLYSLTFDGEDSVFLRPQSIKRVL 327 (445)
T ss_pred EEecccceeeeehhcccce----eccee-ccCCceeeeeecCCCCEEEEEEcC-CceEEEEeecCCCccccCcccceeee
Confidence 9999999999996543210 11111 123378899999999987765432 233444321 000
Q ss_pred -eEEee------ccccCCCCCEEEEEecCCCEEEEEeCCC--------cEEEEECCCCeEEEEE-----cCCCCCCeEEE
Q psy6127 430 -VQSLS------GVLNNNASPLEATFTPDSQFVASGSTDG--------QVHIWNAERGYKVCVL-----DGDHPSAVQSL 489 (515)
Q Consensus 430 -~~~~~------~~~~~~~~i~~~~~sp~g~~l~sgs~dg--------~I~iwd~~~~~~~~~~-----~~~h~~~V~~l 489 (515)
+..+. +..-..+++.+++|.|.|.+||+.-..+ .|.+||....-.+.-. .+.| -..+
T Consensus 328 liaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~---P~~I 404 (445)
T KOG2139|consen 328 LIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEY---PAYI 404 (445)
T ss_pred eeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCC---CceE
Confidence 00110 1111234578999999999999875443 3667877654333222 2222 3456
Q ss_pred EECC---CCCEEEEeeCC
Q psy6127 490 QFNP---KYHMLASACSN 504 (515)
Q Consensus 490 ~~sp---~~~~las~~~d 504 (515)
+|+| ++.+|..+=.+
T Consensus 405 sF~pl~n~g~lLsiaWsT 422 (445)
T KOG2139|consen 405 SFGPLKNEGRLLSIAWST 422 (445)
T ss_pred EeeecccCCcEEEEEecc
Confidence 6666 56666555333
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-14 Score=130.31 Aligned_cols=269 Identities=16% Similarity=0.217 Sum_probs=183.0
Q ss_pred eCCCCcEEEEccceeeeeEeeeecc-ccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCC----ee----------ee
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFR-ENTDKINSLDYSSD-GSLLISCSDDDQIIIYDCEQG----TS----------KN 257 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~-~h~~~I~~l~~spd-~~~lasgs~dg~i~iwd~~~~----~~----------~~ 257 (515)
.+..|-+|++.+... ++...++ .....|+|++|-|. ++-|+.|+..| |.+|..... .. +.
T Consensus 115 va~nddvVriy~kss---t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl 190 (445)
T KOG2139|consen 115 VATNDDVVRIYDKSS---TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVL 190 (445)
T ss_pred hhccCcEEEEeccCC---CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhhe
Confidence 344556688876332 4444443 34678999999994 46788888755 999976531 11 11
Q ss_pred EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc-
Q psy6127 258 TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDL- 336 (515)
Q Consensus 258 ~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~- 336 (515)
.-.+| .+|++++|++||..++.++- .|..|.+||.+++..+......-+.++-+.|+||+.+|+++.-|+..++|+.
T Consensus 191 ~~pgh-~pVtsmqwn~dgt~l~tAS~-gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 191 QDPGH-NPVTSMQWNEDGTILVTASF-GSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred eCCCC-ceeeEEEEcCCCCEEeeccc-CcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 12344 78999999999999998874 5899999999999877665555678999999999999999999999999954
Q ss_pred CCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCcee-------e---------ec---CCCCCcC
Q psy6127 337 RQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFAS-------F---------KC---PGERGCE 397 (515)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~-------~---------~~---~~~~~~~ 397 (515)
++..+.+-.-..+.+...+|+|+|++|+... .|.-++|.+....+..... . .. ...-.++
T Consensus 269 q~wt~erw~lgsgrvqtacWspcGsfLLf~~-sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cge 347 (445)
T KOG2139|consen 269 QSWTKERWILGSGRVQTACWSPCGSFLLFAC-SGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGE 347 (445)
T ss_pred ccceecceeccCCceeeeeecCCCCEEEEEE-cCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCc
Confidence 4444444445556799999999999887764 3445566655432211100 0 00 0112456
Q ss_pred eEEEEEcCCCCEEEEEECCC--------cEEEEECCCCceeEEee-ccccCCCCCEEEEEec---CCCEEEEEeCCCcEE
Q psy6127 398 WTGLKFSPDGKLILVSTNGS--------IIRLFDAFNGNCVQSLS-GVLNNNASPLEATFTP---DSQFVASGSTDGQVH 465 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg--------~i~iwd~~~~~~~~~~~-~~~~~~~~i~~~~~sp---~g~~l~sgs~dg~I~ 465 (515)
..+++|+|.|.++++.-..+ .|.+||.+..-.+.... +..... ....++|+| +|.+|..+-..|.+.
T Consensus 348 aq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge-~P~~IsF~pl~n~g~lLsiaWsTGriq 426 (445)
T KOG2139|consen 348 AQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGE-YPAYISFGPLKNEGRLLSIAWSTGRIQ 426 (445)
T ss_pred cceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCC-CCceEEeeecccCCcEEEEEeccCceE
Confidence 77999999999999876544 36778876554433322 222222 256677777 567888887888888
Q ss_pred EEECC
Q psy6127 466 IWNAE 470 (515)
Q Consensus 466 iwd~~ 470 (515)
-|++.
T Consensus 427 ~ypl~ 431 (445)
T KOG2139|consen 427 RYPLT 431 (445)
T ss_pred eeeeE
Confidence 77763
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=139.30 Aligned_cols=252 Identities=17% Similarity=0.208 Sum_probs=187.8
Q ss_pred eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC------CeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCC
Q psy6127 257 NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD------NKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDK 329 (515)
Q Consensus 257 ~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~------~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg 329 (515)
+.+.+|.+.|.++.|+.++..++ +|+.|..+++|+++. .+++.... .|.+.|.|++|...+.++++|+.++
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~--SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~ 127 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLA--SGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG 127 (609)
T ss_pred hhhhhhccccceeeeccCCeEEe--ecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence 44678999999999999987655 445899999999853 35555443 3568999999999999999999999
Q ss_pred cEEEEEcCCCCeEEEEecCC---CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC
Q psy6127 330 TVRVWDLRQPNNVGMIQLSG---NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~~~---~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
+|...|+++.+.+..+.+.. .+..+..+|..+.+++.+.++.|.+||.+..... ....++.........+.|+|.
T Consensus 128 ~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~--~~~~~~AN~~~~F~t~~F~P~ 205 (609)
T KOG4227|consen 128 TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNP--ISLVLPANSGKNFYTAEFHPE 205 (609)
T ss_pred eeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCC--CceeeecCCCccceeeeecCC
Confidence 99999999999998886654 6889999999999999999999999999875421 233344555667788999996
Q ss_pred C-CEEEEEECCCcEEEEECCCCce-eEEee---ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE-EEEcC
Q psy6127 407 G-KLILVSTNGSIIRLFDAFNGNC-VQSLS---GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV-CVLDG 480 (515)
Q Consensus 407 ~-~~l~~~s~dg~i~iwd~~~~~~-~~~~~---~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~-~~~~~ 480 (515)
. .+|++.+..+-+.+||.+.... +.... +.......-..+.|+|.|..+.+--....-.+||+.+..+. ..+.
T Consensus 206 ~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D- 284 (609)
T KOG4227|consen 206 TPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSD- 284 (609)
T ss_pred CceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEecc-
Confidence 5 5677888888999999886542 21111 11111222357889999998887765555667888764433 3333
Q ss_pred CCC-------CCeEEEEECCCCCEEEEeeCC--EEEEcCCCCCC
Q psy6127 481 DHP-------SAVQSLQFNPKYHMLASACSN--MAFWIPTLSAD 515 (515)
Q Consensus 481 ~h~-------~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~d 515 (515)
|. ..+.+++|..|.. +++|+.+ +.+|.++...|
T Consensus 285 -~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~d 326 (609)
T KOG4227|consen 285 -HNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRAND 326 (609)
T ss_pred -CCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCcc
Confidence 32 2467888888765 7788765 99999886543
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.3e-17 Score=150.82 Aligned_cols=263 Identities=14% Similarity=0.198 Sum_probs=207.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
..-..+.|+.+|+.|+.|+..|.+-.+|+.+++....+... ..|..+.|..+.++++++ ....++||| ..|..++
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~-Etv~Dv~~LHneq~~AVA---QK~y~yvYD-~~GtElH 204 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVM-ETVRDVTFLHNEQFFAVA---QKKYVYVYD-NNGTELH 204 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeehh-hhhhhhhhhcchHHHHhh---hhceEEEec-CCCcEEe
Confidence 34578899999999999999999999999999988887654 568999999998887776 488999999 5577777
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEECCCcEEEEEeecC
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSY 380 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~ 380 (515)
.++.| ..|..+.|.|..-+|++++..|.++--|+.+|+.+..+.. .+....++-+|-+..+-+|...|+|.+|.....
T Consensus 205 Clk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk 283 (545)
T KOG1272|consen 205 CLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK 283 (545)
T ss_pred ehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCc
Confidence 77755 5689999999888999999999999999999999988744 455778899999999999999999999998774
Q ss_pred CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC
Q psy6127 381 DKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
+ .+...-.|.++|.++++.++|+|+++++.|..++|||+++...+.++... .+...+++|..| +| +.+.
T Consensus 284 e-----PLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp----~~a~~ls~Sqkg-lL-A~~~ 352 (545)
T KOG1272|consen 284 E-----PLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTP----HPASNLSLSQKG-LL-ALSY 352 (545)
T ss_pred c-----hHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecC----CCcccccccccc-ce-eeec
Confidence 4 33334568889999999999999999999999999999998866666542 225678888655 33 3445
Q ss_pred CCcEEEEEC-CCCe--EEEE-EcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 461 DGQVHIWNA-ERGY--KVCV-LDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 461 dg~I~iwd~-~~~~--~~~~-~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
...|.||.= -.+. .-.. +.....++|.++.|.|-..+|..|
T Consensus 353 G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIG 397 (545)
T KOG1272|consen 353 GDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIG 397 (545)
T ss_pred CCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeecc
Confidence 667999952 2211 1111 111134689999999965555544
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-14 Score=144.43 Aligned_cols=234 Identities=13% Similarity=0.133 Sum_probs=157.3
Q ss_pred EEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCC
Q psy6127 200 ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD---DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKT 276 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~---dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 276 (515)
.++++| ..... .+.+..+...+.+.+|||||+.|+..+. +..+.+|++.+++... +......+...+|+|||+
T Consensus 180 ~l~~~d--~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~ 255 (429)
T PRK03629 180 ELRVSD--YDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGS 255 (429)
T ss_pred eEEEEc--CCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCC
Confidence 466666 32222 2334556778999999999999987653 4579999998875433 222333455789999999
Q ss_pred eEEEEEeeCCC--eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC-Cc--EEEEEcCCCCeEEEEecCCCe
Q psy6127 277 TAIHASTKVDA--TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD-KT--VRVWDLRQPNNVGMIQLSGNK 351 (515)
Q Consensus 277 ~l~~~s~~~d~--~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-g~--i~iwd~~~~~~~~~~~~~~~~ 351 (515)
.+++... .++ .|++||+++++.... ..+...+....|+|||+.|+..+.+ +. |.++|+.+++...........
T Consensus 256 ~La~~~~-~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~ 333 (429)
T PRK03629 256 KLAFALS-KTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQN 333 (429)
T ss_pred EEEEEEc-CCCCcEEEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCc
Confidence 9887652 343 699999988876544 3445567889999999988777654 44 555577776654433333335
Q ss_pred eEEEECCCCCEEEEEECC---CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCc---EEEEECC
Q psy6127 352 PIAAYDPEGLAFAIGVNS---DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI---IRLFDAF 425 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~---i~iwd~~ 425 (515)
....|+|+|+.++..+.+ ..+.+||+.++.. ..+. ... ......|+|||++|+.++.++. +.++++
T Consensus 334 ~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~---~~Lt--~~~--~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~- 405 (429)
T PRK03629 334 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV---QVLT--DTF--LDETPSIAPNGTMVIYSSSQGMGSVLNLVST- 405 (429)
T ss_pred cCEEECCCCCEEEEEEccCCCceEEEEECCCCCe---EEeC--CCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC-
Confidence 578999999999887643 3578888876542 1221 111 1236789999999999887764 667776
Q ss_pred CCceeEEeeccccCCCCCEEEEEec
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
+|.....+..+.. .+...+|+|
T Consensus 406 ~G~~~~~l~~~~~---~~~~p~Wsp 427 (429)
T PRK03629 406 DGRFKARLPATDG---QVKFPAWSP 427 (429)
T ss_pred CCCCeEECccCCC---CcCCcccCC
Confidence 5555566655333 367788876
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-14 Score=145.43 Aligned_cols=239 Identities=15% Similarity=0.183 Sum_probs=160.1
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
..|.++|.. +.....+..+...+...+|+|+++.+++.+.. ....|++||+.+++... +....+.+...+|+|||+.
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~ 253 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRT 253 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCE
Confidence 467777764 55555666677889999999999998887632 23469999999887543 3334455678999999998
Q ss_pred EE-EEeCCCcEEEEE--cCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 322 FI-SGSYDKTVRVWD--LRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 322 l~-s~s~dg~i~iwd--~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
|+ +.+.+|...+|. +.++................|+|||+.++..+. +|...+|.+...... ...+.... ..
T Consensus 254 la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~-~~~lt~~g---~~ 329 (427)
T PRK02889 254 LAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA-AQRVTFTG---SY 329 (427)
T ss_pred EEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc-eEEEecCC---CC
Confidence 76 567788766664 555543332233333456889999999887664 467777776532211 11222111 22
Q ss_pred eEEEEEcCCCCEEEEEECCC---cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC---cEEEEECCC
Q psy6127 398 WTGLKFSPDGKLILVSTNGS---IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG---QVHIWNAER 471 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg---~I~iwd~~~ 471 (515)
....+|+|||++++..+.++ .|.+||+.+++... +... . ......|+|||+.|+.++.++ .+++.+. +
T Consensus 330 ~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~---~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~ 403 (427)
T PRK02889 330 NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-T---RDESPSFAPNGRYILYATQQGGRSVLAAVSS-D 403 (427)
T ss_pred cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-C---CccCceECCCCCEEEEEEecCCCEEEEEEEC-C
Confidence 33678999999998877554 59999998886543 3221 1 135679999999888877543 3566666 4
Q ss_pred CeEEEEEcCCCCCCeEEEEECCC
Q psy6127 472 GYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 472 ~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
|.....+.. +.+.+...+|+|-
T Consensus 404 g~~~~~l~~-~~g~~~~p~wsp~ 425 (427)
T PRK02889 404 GRIKQRLSV-QGGDVREPSWGPF 425 (427)
T ss_pred CCceEEeec-CCCCCCCCccCCC
Confidence 666666655 6677888899884
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=5e-15 Score=141.06 Aligned_cols=246 Identities=18% Similarity=0.294 Sum_probs=162.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee----eeEecCCCCceeEEEEe-----cCCCeEEEEEeeCCCeEEEEE
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS----KNTINSKKYGVDLIKFT-----HSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~-----~~~~~l~~~s~~~d~~v~vwd 293 (515)
.++...++-.|++|+-.-. ..+.+|+...+.. +....-......|-+|+ +.+-.++++- ..|.|.+.|
T Consensus 125 ~~~~~~~~~~gd~lcFnvg-~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf--~tGqvq~id 201 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFNVG-RELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGF--TTGQVQLID 201 (636)
T ss_pred ceeeccccCCCCEEEEecC-CeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEee--ccCceEEec
Confidence 3444455556666665433 4588888764322 11111111223444443 3444455544 478888888
Q ss_pred CCCCeeeEEec----CCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC
Q psy6127 294 LHDNKYVRYFP----GHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 294 ~~~~~~~~~~~----~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
....+..+.+. -....|+++.|-|.+. .++.+-.+|.+.+||.. +.......+....+++..+.....
T Consensus 202 p~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~-------~~~~~t~p~~~~~k~~~~f~i~t~ 274 (636)
T KOG2394|consen 202 PINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKE-------IVCGATAPSYQALKDGDQFAILTS 274 (636)
T ss_pred chhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecc-------ccccCCCCcccccCCCCeeEEeee
Confidence 76633222221 1347899999999665 66777789999999872 112222333444456666655422
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
-+. .. ..+...... ....|..++|+|||++||+.+.||.++|||..+.+.+..++...+. ..|++|
T Consensus 275 ksk-------~~-rNPv~~w~~---~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGG---LLCvcW 340 (636)
T KOG2394|consen 275 KSK-------KT-RNPVARWHI---GEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGG---LLCVCW 340 (636)
T ss_pred ecc-------cc-CCccceeEe---ccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccc---eEEEEE
Confidence 111 00 112222222 2237889999999999999999999999999988777666655544 899999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
||||++|++|++|-.|.||.+..++.+..-++ |..+|..|+|.|
T Consensus 341 SPDGKyIvtGGEDDLVtVwSf~erRVVARGqG-HkSWVs~VaFDp 384 (636)
T KOG2394|consen 341 SPDGKYIVTGGEDDLVTVWSFEERRVVARGQG-HKSWVSVVAFDP 384 (636)
T ss_pred cCCccEEEecCCcceEEEEEeccceEEEeccc-cccceeeEeecc
Confidence 99999999999999999999999999999998 999999999984
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-14 Score=138.25 Aligned_cols=276 Identities=16% Similarity=0.162 Sum_probs=196.6
Q ss_pred ccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 219 ENTDKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~l-asgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
+|...-+.|..+|||+|+ |+|...-.|++||+.+-.....-......|.-.-.+.|-...++.. .|.+|.+.... |
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~--~DR~IefHak~-G 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQ--NDRTIEFHAKY-G 125 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEee--cCceeeehhhc-C
Confidence 577788999999999985 5666788999999986555433333334455555555555555554 47777654422 2
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
..... . -...-.+++++.-.--|+.++....|.-++++.|..+..+... +.++++..++...+|++|+.+|.+..||
T Consensus 126 ~hy~~-R-IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwD 203 (703)
T KOG2321|consen 126 RHYRT-R-IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWD 203 (703)
T ss_pred eeeee-e-cCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEec
Confidence 21111 1 1123345566544444666667778999999999998888655 6689999999999999999999999999
Q ss_pred eecCCCCCceeeec-CC-----CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 377 VRSYDKGPFASFKC-PG-----ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 377 ~~~~~~~~~~~~~~-~~-----~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
.+............ .. .....|+++.|+.+|-.+++|+.+|.+.|||+++.+++..-. | ....+|..+.|.+
T Consensus 204 pR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd-h-~~e~pi~~l~~~~ 281 (703)
T KOG2321|consen 204 PRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD-H-GYELPIKKLDWQD 281 (703)
T ss_pred chhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc-c-CCccceeeecccc
Confidence 98754221111111 11 122348999999999999999999999999999988765433 2 3445688999977
Q ss_pred C--CCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 451 D--SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 451 ~--g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
. +..+++. +...++|||-.+|+....+.. ...++.+++-|++-++.++-.+
T Consensus 282 ~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp--t~~lND~C~~p~sGm~f~Ane~ 334 (703)
T KOG2321|consen 282 TDQQNKVVSM-DKRILKIWDECTGKPMASIEP--TSDLNDFCFVPGSGMFFTANES 334 (703)
T ss_pred cCCCceEEec-chHHhhhcccccCCceeeccc--cCCcCceeeecCCceEEEecCC
Confidence 5 4456554 457799999999999999985 4559999999998888888654
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.3e-14 Score=143.13 Aligned_cols=236 Identities=14% Similarity=0.168 Sum_probs=163.0
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
..|.+||.. +...+.+..+...+...+|+|||+.+++++.. .+..|++||+.+++.. .+..+.+.+...+|+|||+.
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~ 259 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRK 259 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCE
Confidence 478888875 55556677788899999999999998887631 3568999999888654 34456667888999999997
Q ss_pred EE-EEeCCCc--EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CC--cEEEEEeecCCCCCceeeecCCCCC
Q psy6127 322 FI-SGSYDKT--VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SD--SIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 322 l~-s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
|+ +.+.++. |.+||+.+++...............|+|||+.++..+. +| .|.++|+..... ..+.. ..
T Consensus 260 la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~---~~lt~---~~ 333 (435)
T PRK05137 260 VVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP---RRISF---GG 333 (435)
T ss_pred EEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe---EEeec---CC
Confidence 65 5555555 77779988876554444444567899999999988774 33 577777655331 12211 12
Q ss_pred cCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC------CcEEE
Q psy6127 396 CEWTGLKFSPDGKLILVSTNG---SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD------GQVHI 466 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d------g~I~i 466 (515)
..+....|+|+|++|+..+.+ ..|.+||...+. .+.+... ..+....|+|||+.|+..+.+ ..+++
T Consensus 334 ~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~----~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~ 408 (435)
T PRK05137 334 GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTSG----FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYT 408 (435)
T ss_pred CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccCC----CCCCCCeECCCCCEEEEEEccCCCCCcceEEE
Confidence 345568899999999887643 368888875554 3333221 125678999999988765543 25888
Q ss_pred EECCCCeEEEEEcCCCCCCeEEEEECCC
Q psy6127 467 WNAERGYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 467 wd~~~~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
+|+..+.. ..+. ..+.+...+|+|-
T Consensus 409 ~dl~g~~~-~~l~--~~~~~~~p~Wsp~ 433 (435)
T PRK05137 409 VDLTGRNE-REVP--TPGDASDPAWSPL 433 (435)
T ss_pred EECCCCce-EEcc--CCCCccCcccCCC
Confidence 88866554 3444 3445778888873
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-14 Score=145.61 Aligned_cols=236 Identities=15% Similarity=0.152 Sum_probs=161.4
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
.+|.+||.. +...+.+..+...+...+|+|+++.+++++.. .+..|++||+.+++... +..+.+...+.+|+|||+.
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~ 261 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRR 261 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCE
Confidence 468999986 44555666677789999999999998887621 23579999998876543 3334455668899999997
Q ss_pred EE-EEeCCC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CCc--EEEEEeecCCCCCceeeecCCCCC
Q psy6127 322 FI-SGSYDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SDS--IKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 322 l~-s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
++ +.+.+| .|.+||+.+++..............+|+|||+.++..+. +|. +.++|+.++. ...+.. ..
T Consensus 262 l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~---~~~lt~---~g 335 (433)
T PRK04922 262 LALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS---AERLTF---QG 335 (433)
T ss_pred EEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC---eEEeec---CC
Confidence 65 445555 599999998876554444333467899999999988764 455 4455554432 112221 11
Q ss_pred cCeEEEEEcCCCCEEEEEECCC---cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC---CcEEEEEC
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGS---IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD---GQVHIWNA 469 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d---g~I~iwd~ 469 (515)
......+|+|+|++++..+.++ .|.+||+.+++.. .+... . ......|+|||++++..+.+ +.+++++.
T Consensus 336 ~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~-~---~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~ 410 (433)
T PRK04922 336 NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPG-S---LDESPSFAPNGSMVLYATREGGRGVLAAVST 410 (433)
T ss_pred CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCC-C---CCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 2234689999999998776443 6999999887654 33211 1 13457899999988776653 45888888
Q ss_pred CCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 470 ERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 470 ~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
. +.....+.. +.+.+...+|+|
T Consensus 411 ~-g~~~~~l~~-~~g~~~~p~wsp 432 (433)
T PRK04922 411 D-GRVRQRLVS-ADGEVREPAWSP 432 (433)
T ss_pred C-CCceEEccc-CCCCCCCCccCC
Confidence 5 445555554 567788888987
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-14 Score=144.44 Aligned_cols=235 Identities=15% Similarity=0.131 Sum_probs=158.2
Q ss_pred cEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeeEecCCCCceeEEEEecCC
Q psy6127 199 TITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD---DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275 (515)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 275 (515)
..+++|| .. +...+.+..|...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+.....+|+|+|
T Consensus 184 ~~l~i~D--~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG 259 (433)
T PRK04922 184 YALQVAD--SD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDG 259 (433)
T ss_pred EEEEEEC--CC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCC
Confidence 4577777 32 33345566778889999999999999988743 479999998776533 33344455678999999
Q ss_pred CeEEEEEeeCCC--eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-CCc--EEEEEcCCCCeEEEEecCCC
Q psy6127 276 TTAIHASTKVDA--TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-DKT--VRVWDLRQPNNVGMIQLSGN 350 (515)
Q Consensus 276 ~~l~~~s~~~d~--~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg~--i~iwd~~~~~~~~~~~~~~~ 350 (515)
+.+++... .++ .|++||+.+++.. .+..+.......+|+|||+.|+.++. +|. |.++|+.+++..........
T Consensus 260 ~~l~~~~s-~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~ 337 (433)
T PRK04922 260 RRLALTLS-RDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNY 337 (433)
T ss_pred CEEEEEEe-CCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCC
Confidence 98876542 344 6999999887754 45556556678899999998887764 444 66677777765443322233
Q ss_pred eeEEEECCCCCEEEEEECCC---cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC---CcEEEEEC
Q psy6127 351 KPIAAYDPEGLAFAIGVNSD---SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG---SIIRLFDA 424 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d---g~i~iwd~ 424 (515)
....+|+|+|+.++..+.++ .|.+||+.+++. ...... .......|+|||++++..+.+ +.+.+++.
T Consensus 338 ~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~-----~~Lt~~--~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~ 410 (433)
T PRK04922 338 NARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV-----RTLTPG--SLDESPSFAPNGSMVLYATREGGRGVLAAVST 410 (433)
T ss_pred ccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe-----EECCCC--CCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 44689999999998876443 588999876542 111111 123367899999998877653 35778887
Q ss_pred CCCceeEEeeccccCCCCCEEEEEec
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
. +.....+..+. ..+...+|+|
T Consensus 411 ~-g~~~~~l~~~~---g~~~~p~wsp 432 (433)
T PRK04922 411 D-GRVRQRLVSAD---GEVREPAWSP 432 (433)
T ss_pred C-CCceEEcccCC---CCCCCCccCC
Confidence 4 44444444322 2255667776
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.3e-14 Score=141.47 Aligned_cols=234 Identities=11% Similarity=0.116 Sum_probs=160.5
Q ss_pred cEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeeeeEecCCCCceeEEEEecCC
Q psy6127 199 TITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD---DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275 (515)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~---dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 275 (515)
..+.++| .. +...+.+..|...+.+.+|+|||+.|+..+. +..|.+||+.+++.. .+..+.+.+...+|+|+|
T Consensus 182 ~~l~~~d--~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG 257 (435)
T PRK05137 182 KRLAIMD--QD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDG 257 (435)
T ss_pred eEEEEEC--CC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCC
Confidence 3466666 32 3344556788889999999999999988764 468999999887653 455556677889999999
Q ss_pred CeEEEEEeeCCC--eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEEcCCCCeEEEEecCCC
Q psy6127 276 TTAIHASTKVDA--TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-DK--TVRVWDLRQPNNVGMIQLSGN 350 (515)
Q Consensus 276 ~~l~~~s~~~d~--~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~ 350 (515)
+.+++.. +.++ .|++||+.+++. ..+..+........|+|||+.|+..+. +| .|.++|+.+++..........
T Consensus 258 ~~la~~~-~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~ 335 (435)
T PRK05137 258 RKVVMSL-SQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGR 335 (435)
T ss_pred CEEEEEE-ecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCc
Confidence 9887665 3444 588889988765 445556666778999999998887764 33 588889877765544443444
Q ss_pred eeEEEECCCCCEEEEEECC---CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC------CcEEE
Q psy6127 351 KPIAAYDPEGLAFAIGVNS---DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG------SIIRL 421 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d------g~i~i 421 (515)
.....|+|+|+.++....+ ..|.+||+..... ..+. .. ..+..+.|+|||+.|+..+.+ ..+++
T Consensus 336 ~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~---~~lt--~~--~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~ 408 (435)
T PRK05137 336 YSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE---RILT--SG--FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYT 408 (435)
T ss_pred ccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce---Eecc--CC--CCCCCCeECCCCCEEEEEEccCCCCCcceEEE
Confidence 6668899999999887643 2577777654321 1111 11 235578999999998876543 25778
Q ss_pred EECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 422 FDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 422 wd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
+|+..+.. ..+.. . ..+...+|+|
T Consensus 409 ~dl~g~~~-~~l~~-~---~~~~~p~Wsp 432 (435)
T PRK05137 409 VDLTGRNE-REVPT-P---GDASDPAWSP 432 (435)
T ss_pred EECCCCce-EEccC-C---CCccCcccCC
Confidence 88765544 33332 1 1245667766
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7e-14 Score=140.97 Aligned_cols=236 Identities=15% Similarity=0.135 Sum_probs=153.8
Q ss_pred cEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeeEecCCCCceeEEEEecCC
Q psy6127 199 TITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD---DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275 (515)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 275 (515)
.-++++| . .+...+.+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+.....+|+|++
T Consensus 176 ~~L~~~D--~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG 251 (427)
T PRK02889 176 YQLQISD--A-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDG 251 (427)
T ss_pred cEEEEEC--C-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC
Confidence 3466666 2 233344556778899999999999999988753 469999999886543 33334556789999999
Q ss_pred CeEEEEEeeCCCeEEEE--ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEc--CCCCeEEEEecCCC
Q psy6127 276 TTAIHASTKVDATLRYL--SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDL--RQPNNVGMIQLSGN 350 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vw--d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~--~~~~~~~~~~~~~~ 350 (515)
+.+++.. +.++...+| |..++. ...+..+........|+|||+.|+..+. +|...+|.+ .+++..........
T Consensus 252 ~~la~~~-~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~ 329 (427)
T PRK02889 252 RTLAVAL-SRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSY 329 (427)
T ss_pred CEEEEEE-ccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCC
Confidence 9988765 356665555 555444 4455556666678899999998876654 466666654 45543333222222
Q ss_pred eeEEEECCCCCEEEEEECCC---cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC---cEEEEEC
Q psy6127 351 KPIAAYDPEGLAFAIGVNSD---SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS---IIRLFDA 424 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg---~i~iwd~ 424 (515)
.....|+|+|++++..+.++ .|.+||+.++... .+ ... .......|+|||++|+.++.++ .+.+.+.
T Consensus 330 ~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~---~l--t~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~ 402 (427)
T PRK02889 330 NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT---AL--TDT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSS 402 (427)
T ss_pred cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE---Ec--cCC--CCccCceECCCCCEEEEEEecCCCEEEEEEEC
Confidence 44578999999999877654 5899998775421 11 111 1234789999999998877543 3555565
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
++.....+..+.+ .+...+|+|-
T Consensus 403 -~g~~~~~l~~~~g---~~~~p~wsp~ 425 (427)
T PRK02889 403 -DGRIKQRLSVQGG---DVREPSWGPF 425 (427)
T ss_pred -CCCceEEeecCCC---CCCCCccCCC
Confidence 4555555543222 2566677763
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=142.41 Aligned_cols=299 Identities=16% Similarity=0.182 Sum_probs=220.1
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeee-ccccCCcEEEEEEcC--CCCEEEEE
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKV-FRENTDKINSLDYSS--DGSLLISC 239 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~-~~~h~~~I~~l~~sp--d~~~lasg 239 (515)
.....|..|...+-.+.|+.... ...|+++|..+.+|| ....+.... -.||...|..-.|-| +.+.++++
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd-----~l~SgSDD~~vv~Wd--W~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~ 205 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGD-----VLASGSDDLQVVVWD--WVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTS 205 (559)
T ss_pred hhhhcccCCCCccceeeecccCc-----eeeccCccceEEeeh--hhccCcccccccccccchhhhhccCCCCCcCceec
Confidence 34456677777777778876653 334899999999999 444444444 458999999999998 45789999
Q ss_pred eCCCeEEEEECCC-Cee--eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe---cCCCC---Ce
Q psy6127 240 SDDDQIIIYDCEQ-GTS--KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF---PGHVR---KV 310 (515)
Q Consensus 240 s~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~---~~h~~---~v 310 (515)
+.||.|++=.+.. +.+ ...+..|.++|..++.-|+..+.+..+ +.|+.+.-+|++.+.+...+ ..+.. ..
T Consensus 206 s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~-geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L 284 (559)
T KOG1334|consen 206 SRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSC-GEDAVVFHIDLRQDVPAEKFVCREADEKERVGL 284 (559)
T ss_pred cccCceeeeeeccccceecceecccccCccceeeecCCCCCccccc-ccccceeeeeeccCCccceeeeeccCCccceee
Confidence 9999999877653 322 345678999999999999988877665 47999999999887654333 22333 56
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeE------EEE-------ecCCCeeEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 311 SSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNV------GMI-------QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 311 ~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~------~~~-------~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
..++..|.+. .+++|+.|..+++||.+.-... ..+ ...-.+++++++.++.-+.+...|-.|++|.
T Consensus 285 ~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~ 364 (559)
T KOG1334|consen 285 YTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFN 364 (559)
T ss_pred eeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEec
Confidence 7889999776 8999999999999998753222 222 1223488999998888888888999999995
Q ss_pred eecCCC------CCc-eeeec-CCCC--CcCeEEEEE-cCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 377 VRSYDK------GPF-ASFKC-PGER--GCEWTGLKF-SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 377 ~~~~~~------~~~-~~~~~-~~~~--~~~i~~l~~-sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
-..+.. .+. ...+. ..+| ...|.++-| -|...|+++|+.-|.|.||+-.+++.++.+.+... -|+|
T Consensus 365 ~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~---VVNC 441 (559)
T KOG1334|consen 365 KSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH---VVNC 441 (559)
T ss_pred cccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccc---eEec
Confidence 433222 000 01111 2233 224666654 67889999999999999999999998888877544 3899
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 446 ATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 446 ~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
+.-+|--..||+.+-|..|+||-..+.
T Consensus 442 LEpHP~~PvLAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 442 LEPHPHLPVLASSGIDHDVKIWTPLTA 468 (559)
T ss_pred cCCCCCCchhhccCCccceeeecCCcc
Confidence 999999999999999999999987544
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-15 Score=142.03 Aligned_cols=236 Identities=12% Similarity=0.164 Sum_probs=193.2
Q ss_pred ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy6127 259 INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~ 338 (515)
+.-...+...+.++.+|.++++++ ..|.+..+|..+++....+. -...|.++.|..+.+++|.+ ....+.||| +.
T Consensus 125 L~l~eFGPY~~~ytrnGrhlllgG--rKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD-~~ 199 (545)
T KOG1272|consen 125 LSLPEFGPYHLDYTRNGRHLLLGG--RKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVYD-NN 199 (545)
T ss_pred ccccccCCeeeeecCCccEEEecC--Cccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhh-hhceEEEec-CC
Confidence 334456678899999999988765 79999999999998887765 35678999999877777766 457899999 56
Q ss_pred CCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCc
Q psy6127 339 PNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418 (515)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~ 418 (515)
|..+..+.....+..+.|-|.--+|++++..|.++.-|+..++ .........+.+..++-+|-+..+-+|...|+
T Consensus 200 GtElHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gk-----lVa~~~t~~G~~~vm~qNP~NaVih~GhsnGt 274 (545)
T KOG1272|consen 200 GTELHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGK-----LVASIRTGAGRTDVMKQNPYNAVIHLGHSNGT 274 (545)
T ss_pred CcEEeehhhcCchhhhcccchhheeeecccCCceEEEeechhh-----hhHHHHccCCccchhhcCCccceEEEcCCCce
Confidence 7777788777779999999999999999999999999999876 33333445566778899998889999999999
Q ss_pred EEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEE
Q psy6127 419 IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHML 498 (515)
Q Consensus 419 i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 498 (515)
|.+|.....+++..+..|.+ +|.++++.++|.|+++.+.|..++|||++.-..+.+... .-+...+++|..|.+.
T Consensus 275 VSlWSP~skePLvKiLcH~g---~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t--p~~a~~ls~SqkglLA 349 (545)
T KOG1272|consen 275 VSLWSPNSKEPLVKILCHRG---PVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT--PHPASNLSLSQKGLLA 349 (545)
T ss_pred EEecCCCCcchHHHHHhcCC---CcceEEECCCCcEEeecccccceeEeeeccccccceeec--CCCcccccccccccee
Confidence 99999998888877777554 499999999999999999999999999998887776654 3456789999887655
Q ss_pred EEeeCCEEEEc
Q psy6127 499 ASACSNMAFWI 509 (515)
Q Consensus 499 as~~~dv~iW~ 509 (515)
++-+..+.||.
T Consensus 350 ~~~G~~v~iw~ 360 (545)
T KOG1272|consen 350 LSYGDHVQIWK 360 (545)
T ss_pred eecCCeeeeeh
Confidence 55455599995
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.2e-12 Score=123.19 Aligned_cols=269 Identities=16% Similarity=0.190 Sum_probs=176.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCC--e--eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 221 TDKINSLDYSSDGSLLISCSD----DDQIIIYDCEQG--T--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~----dg~i~iwd~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
......++++|++++|++... ++.|..|++... + .+............++++|+++.++++. ..+|.|.++
T Consensus 36 ~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~van-y~~g~v~v~ 114 (345)
T PF10282_consen 36 GENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVAN-YGGGSVSVF 114 (345)
T ss_dssp SSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEE-TTTTEEEEE
T ss_pred CCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEE-ccCCeEEEE
Confidence 344567889999999999877 478999988764 2 3334443445567899999999999887 469999999
Q ss_pred ECCC-CeeeEE---ec----------CCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCC--eEE----EEecCCCe
Q psy6127 293 SLHD-NKYVRY---FP----------GHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQPN--NVG----MIQLSGNK 351 (515)
Q Consensus 293 d~~~-~~~~~~---~~----------~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~--~~~----~~~~~~~~ 351 (515)
++.. +..... +. .......++.++|+++++++... ...|.+|++.... ... .+......
T Consensus 115 ~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GP 194 (345)
T PF10282_consen 115 PLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGP 194 (345)
T ss_dssp EECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSE
T ss_pred EccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCC
Confidence 9987 433222 11 12345789999999998877653 4579999997765 322 22444568
Q ss_pred eEEEECCCCCEEEEEE-CCCcEEEEEeecCCC--CCceeeecC-C--CCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEEC
Q psy6127 352 PIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDK--GPFASFKCP-G--ERGCEWTGLKFSPDGKLILVST-NGSIIRLFDA 424 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~--~~~~~~~~~-~--~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~ 424 (515)
+.+.|+|+++++.+.. .++.|.+|++..... ......... . ........++++|||++|+++. ..+.|.+|++
T Consensus 195 Rh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~ 274 (345)
T PF10282_consen 195 RHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDL 274 (345)
T ss_dssp EEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEE
T ss_pred cEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEE
Confidence 8999999999887665 578899999983221 111122221 1 1122567899999999998876 4678999998
Q ss_pred C--CCceeEEeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEEEC--CCCeEEEEEcCCCCCCeEEEEE
Q psy6127 425 F--NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIWNA--ERGYKVCVLDGDHPSAVQSLQF 491 (515)
Q Consensus 425 ~--~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~--~~~~~~~~~~~~h~~~V~~l~~ 491 (515)
. +++. ..+.........++.++++|+|++|+++. .++.|.+|++ ++|.+...-....-....||.|
T Consensus 275 d~~~g~l-~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 275 DPATGTL-TLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp CTTTTTE-EEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred ecCCCce-EEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 3 3433 22222222233379999999999999887 5578999866 5776655432112345667765
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.4e-12 Score=121.93 Aligned_cols=275 Identities=15% Similarity=0.218 Sum_probs=179.8
Q ss_pred EEEEeCC----CeEEEEEC--CCCeeeeEe-cCCCCceeEEEEecCCCeEEEEEee--CCCeEEEEECCCC--e--eeEE
Q psy6127 236 LISCSDD----DQIIIYDC--EQGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTK--VDATLRYLSLHDN--K--YVRY 302 (515)
Q Consensus 236 lasgs~d----g~i~iwd~--~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~--~d~~v~vwd~~~~--~--~~~~ 302 (515)
++.|+.. +.|.+|++ ++++....- .........++++|+++.++++... .++.|..|++... + .+..
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~ 81 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS 81 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence 4556555 68888877 444432211 1233556778999999999888743 4789999988764 3 3333
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCC-CeEEE---Ee-----------cCCCeeEEEECCCCCEEEEE
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQP-NNVGM---IQ-----------LSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~-~~~~~---~~-----------~~~~~~~~~~s~~~~~l~~g 366 (515)
..........++++|++++|+++.. +|.|.++++... ..... +. ......++.++|+++++++.
T Consensus 82 ~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~ 161 (345)
T PF10282_consen 82 VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP 161 (345)
T ss_dssp EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE
T ss_pred eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE
Confidence 3323455678999999999888874 899999999874 33222 21 12336689999999988876
Q ss_pred E-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECC--CCce--eEEeeccc---
Q psy6127 367 V-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAF--NGNC--VQSLSGVL--- 437 (515)
Q Consensus 367 ~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~--~~~~--~~~~~~~~--- 437 (515)
. ....|.+|++.....................+.++|+|+++++++.. .++.|.++++. ++.. +..+....
T Consensus 162 dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 241 (345)
T PF10282_consen 162 DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGF 241 (345)
T ss_dssp ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTS
T ss_pred ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccc
Confidence 5 35689999998754222121222234555678999999999987776 47789999987 4432 22222211
Q ss_pred cCCCCCEEEEEecCCCEEEEEe-CCCcEEEEECC--CC--eEEEEEcCCCCCCeEEEEECCCCCEEEEeeC---CEEEEc
Q psy6127 438 NNNASPLEATFTPDSQFVASGS-TDGQVHIWNAE--RG--YKVCVLDGDHPSAVQSLQFNPKYHMLASACS---NMAFWI 509 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~--~~--~~~~~~~~~h~~~V~~l~~sp~~~~las~~~---dv~iW~ 509 (515)
........++++|||++|+++. ..+.|.+|++. ++ +.+..+.. .....+.++++|+|++|+++.. .+.+|+
T Consensus 242 ~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~-~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~ 320 (345)
T PF10282_consen 242 TGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPT-GGKFPRHFAFSPDGRYLYVANQDSNTVSVFD 320 (345)
T ss_dssp CSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEE-SSSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred cccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCeEEEEE
Confidence 1112468899999999988876 45789999983 34 33344433 3345899999999999998873 388887
Q ss_pred CC
Q psy6127 510 PT 511 (515)
Q Consensus 510 ~~ 511 (515)
++
T Consensus 321 ~d 322 (345)
T PF10282_consen 321 ID 322 (345)
T ss_dssp EE
T ss_pred Ee
Confidence 75
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.5e-14 Score=127.14 Aligned_cols=250 Identities=17% Similarity=0.324 Sum_probs=174.0
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----eeeEecCCC------------CceeEEEEecCCCeEEEEEe
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-----SKNTINSKK------------YGVDLIKFTHSKTTAIHAST 283 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~~l~~~s~ 283 (515)
.+-|.++.|...|.+||+|..+|.|.++.-.... ....++.|+ ..|..+.|.++++...+...
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4678999999999999999999999999754322 223344442 45889999998776444333
Q ss_pred eCCCeEEEEECCCCee-----------------------------------eEEe-cCCCCCeEEEEEcCCCCEEEEEeC
Q psy6127 284 KVDATLRYLSLHDNKY-----------------------------------VRYF-PGHVRKVSSLNLSPVDDSFISGSY 327 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~-----------------------------------~~~~-~~h~~~v~~l~~~~~~~~l~s~s~ 327 (515)
..|.+|++|.+..... .+.+ .+|+-.|+++.++.|+..++++ .
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-D 183 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-D 183 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-c
Confidence 5799999998754321 1111 3578889999999999988876 4
Q ss_pred CCcEEEEEcCCCC-eEEEEec--------CCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCC--Cceeeec-----
Q psy6127 328 DKTVRVWDLRQPN-NVGMIQL--------SGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKG--PFASFKC----- 390 (515)
Q Consensus 328 dg~i~iwd~~~~~-~~~~~~~--------~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~--~~~~~~~----- 390 (515)
|=.|.+|+++-.. +...... ..-+++..|+|. .+.++..+..|+|++-|++..... ....+..
T Consensus 184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~ 263 (433)
T KOG1354|consen 184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS 263 (433)
T ss_pred ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc
Confidence 6789999987432 2222211 123667889994 577888899999999999942210 0001111
Q ss_pred ----CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC-CCCceeEEeeccccC------------CCCCEEEEEecCCC
Q psy6127 391 ----PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA-FNGNCVQSLSGVLNN------------NASPLEATFTPDSQ 453 (515)
Q Consensus 391 ----~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~-~~~~~~~~~~~~~~~------------~~~i~~~~~sp~g~ 453 (515)
...--..|..+.|+++|+|+++-.. -+|++||+ ...+++.+++.|... ...-..++|+.++.
T Consensus 264 ~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~ 342 (433)
T KOG1354|consen 264 SRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDS 342 (433)
T ss_pred chhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcc
Confidence 1112245778999999999987543 58999999 456667776655321 11236689999999
Q ss_pred EEEEEeCCCcEEEEECCCC
Q psy6127 454 FVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~~~ 472 (515)
++++|+..+.+++++...|
T Consensus 343 ~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 343 YVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred eEecccccceEEEecCCCC
Confidence 9999999999999996554
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-13 Score=122.15 Aligned_cols=151 Identities=12% Similarity=0.272 Sum_probs=116.5
Q ss_pred EEEEEcCCCCEEEEEeC----------CCeEEEEECC-CCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 225 NSLDYSSDGSLLISCSD----------DDQIIIYDCE-QGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 225 ~~l~~spd~~~lasgs~----------dg~i~iwd~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
..+.|+|+|++|+.-.. -+...+|.++ .+.....+.. ..++|.+++|+|+++.++++.|..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 35678999987765433 1345555553 2344444443 3457999999999999988887778899999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD---KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN- 368 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~- 368 (515)
|++ ++.+..+. ...+..+.|+|+|+++++++.+ |.+.+||.++.+.+....+.. ...++|+|+|++++++..
T Consensus 89 d~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 89 DVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-ATDVEWSPDGRYLATATTS 164 (194)
T ss_pred cCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCc-EEEEEEcCCCCEEEEEEec
Confidence 996 66666664 5678899999999999998754 679999999988888877665 789999999999999874
Q ss_pred -----CCcEEEEEeec
Q psy6127 369 -----SDSIKLYDVRS 379 (515)
Q Consensus 369 -----dg~i~i~d~~~ 379 (515)
|..++||+...
T Consensus 165 ~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 165 PRLRVDNGFKIWSFQG 180 (194)
T ss_pred cceeccccEEEEEecC
Confidence 67889999864
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=5e-14 Score=134.33 Aligned_cols=169 Identities=15% Similarity=0.172 Sum_probs=129.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeeeeEec----CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC---------
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQGTSKNTIN----SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN--------- 297 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~--------- 297 (515)
|++--|..|-.-|.|.+.|....+..+.+. .....|+|+.|-|.++.+++++ -.+|.++++|.+-.
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a-~~sGnlyly~~~~~~~~t~p~~~ 261 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVA-HASGNLYLYDKEIVCGATAPSYQ 261 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEE-EecCceEEeeccccccCCCCccc
Confidence 456567778888999999876533222221 2347899999999998888887 47999999975311
Q ss_pred -----e--------------eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEEC
Q psy6127 298 -----K--------------YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYD 357 (515)
Q Consensus 298 -----~--------------~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s 357 (515)
. ++..+.--.+.|...+|+|||++||+.+.||.+||+|..+.+.+..+ ..-+...|++||
T Consensus 262 ~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWS 341 (636)
T KOG2394|consen 262 ALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWS 341 (636)
T ss_pred ccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEc
Confidence 0 11111123457889999999999999999999999999988776555 233558999999
Q ss_pred CCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC
Q psy6127 358 PEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP 405 (515)
Q Consensus 358 ~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp 405 (515)
|||++|++|++|.-|.||.+...+ .+..-.+|.+.|+.++|+|
T Consensus 342 PDGKyIvtGGEDDLVtVwSf~erR-----VVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 342 PDGKYIVTGGEDDLVTVWSFEERR-----VVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred CCccEEEecCCcceEEEEEeccce-----EEEeccccccceeeEeecc
Confidence 999999999999999999998754 5555678999999999997
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.2e-11 Score=115.39 Aligned_cols=264 Identities=11% Similarity=0.067 Sum_probs=176.8
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee--------CCCeEEEEECCCCeeeEEecCCC-------
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK--------VDATLRYLSLHDNKYVRYFPGHV------- 307 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~--------~d~~v~vwd~~~~~~~~~~~~h~------- 307 (515)
++|.+.|..+++.+.++.....+-. + ++|+++.++++... .+..|.+||..+.+.+..+.-..
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 8999999999999988876554443 4 99999999988731 58899999999999998876322
Q ss_pred CCeEEEEEcCCCCEEEEEe-C-CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 308 RKVSSLNLSPVDDSFISGS-Y-DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 308 ~~v~~l~~~~~~~~l~s~s-~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
.....++++|||++++... . +..|.+.|+.+++.+..+...+.......+++...+.+ .||......+....+...
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~--~Dg~~~~v~~d~~g~~~~ 182 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHC--RDGSLAKVGYGTKGNPKI 182 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEe--ecCceEEEEecCCCceEE
Confidence 2334789999999888766 3 78999999999999999877664444444444433322 355544443333221111
Q ss_pred eeeecCCCCCcCe-EEEEEcC-CCCEEEEEECCCcEEEEECCCC-----ceeEEeeccc----cCCCCCEEEEEecCCCE
Q psy6127 386 ASFKCPGERGCEW-TGLKFSP-DGKLILVSTNGSIIRLFDAFNG-----NCVQSLSGVL----NNNASPLEATFTPDSQF 454 (515)
Q Consensus 386 ~~~~~~~~~~~~i-~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~-----~~~~~~~~~~----~~~~~i~~~~~sp~g~~ 454 (515)
...........++ ..-.|.+ +|+++++..+ |.|.+.|+... .....+.... -......-++++|+++.
T Consensus 183 ~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~ 261 (352)
T TIGR02658 183 KPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDR 261 (352)
T ss_pred eeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCE
Confidence 1111100100000 0114455 8888887777 99999996443 2222221110 01222345999999998
Q ss_pred EEEEe----------CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee---CCEEEEcCCCC
Q psy6127 455 VASGS----------TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC---SNMAFWIPTLS 513 (515)
Q Consensus 455 l~sgs----------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~---~dv~iW~~~~~ 513 (515)
+++.. ..+.|.++|..+++.+..+.. ...+..++++||++ +|.+.. +++.+.|....
T Consensus 262 lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v--G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 262 IYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL--GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred EEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC--CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence 88743 225799999999999999984 45799999999999 776654 45999887643
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.6e-13 Score=124.88 Aligned_cols=260 Identities=18% Similarity=0.224 Sum_probs=182.4
Q ss_pred CCcEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCeeeeEe------cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 221 TDKINSLDYSSDG--SLLISCSDDDQIIIYDCEQGTSKNTI------NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 221 ~~~I~~l~~spd~--~~lasgs~dg~i~iwd~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
...|..++|.-|+ ..+...+.|..+..+..........+ .....+|..++.. + ..++++. .+|.+.+|
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-d-g~Litc~--~sG~l~~~ 130 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-D-GTLITCV--SSGNLQVR 130 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-C-CEEEEEe--cCCcEEEE
Confidence 4566777776554 34555556667777776655444332 3344555555443 2 3444444 59999999
Q ss_pred ECCCCe----eeEEecCCCCCeEEEEEcCCCC-EEEEEeCC--CcEEEEEcCCCCeEEEEec----------CCCeeEEE
Q psy6127 293 SLHDNK----YVRYFPGHVRKVSSLNLSPVDD-SFISGSYD--KTVRVWDLRQPNNVGMIQL----------SGNKPIAA 355 (515)
Q Consensus 293 d~~~~~----~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~d--g~i~iwd~~~~~~~~~~~~----------~~~~~~~~ 355 (515)
..+.+. ....+..+ ..+..+.-+|..+ .+++|+.. ..+++||++..+.+..-.. +--++.+.
T Consensus 131 ~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~ 209 (412)
T KOG3881|consen 131 HDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIR 209 (412)
T ss_pred eccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccce
Confidence 988443 22333323 4466666666655 45558888 8899999998754433211 11134577
Q ss_pred ECCC--CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE-
Q psy6127 356 YDPE--GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS- 432 (515)
Q Consensus 356 ~s~~--~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~- 432 (515)
|-+. ...|++++.-+.+++||.+.++ .|+..+ .....+++++...|+++++++|...+.+..||++.++....
T Consensus 210 Fl~g~~~~~fat~T~~hqvR~YDt~~qR-RPV~~f---d~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~ 285 (412)
T KOG3881|consen 210 FLEGSPNYKFATITRYHQVRLYDTRHQR-RPVAQF---DFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCG 285 (412)
T ss_pred ecCCCCCceEEEEecceeEEEecCcccC-cceeEe---ccccCcceeeeecCCCcEEEEecccchhheecccCceeeccc
Confidence 7777 8899999999999999999654 333333 34466889999999999999999999999999999987766
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCC
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
+.+..+ .++++..+|.++++++++-|..|||+|+++.+++.... -....+++.+.++
T Consensus 286 ~kg~tG---sirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY--vKs~lt~il~~~~ 342 (412)
T KOG3881|consen 286 LKGITG---SIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY--VKSRLTFILLRDD 342 (412)
T ss_pred cCCccC---CcceEEEcCCCceEEeeccceeEEEeecccchhhhhhh--hhccccEEEecCC
Confidence 555444 48999999999999999999999999999987776654 3456777777664
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-12 Score=128.62 Aligned_cols=307 Identities=14% Similarity=0.141 Sum_probs=188.3
Q ss_pred CCcchhhccccccccCCce--eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCC
Q psy6127 155 GSWDFELLHSLSSLESPHF--VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSD 232 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd 232 (515)
.+.|..+.+.+.+++.+.. ....++++++.. +. .+.++.+.++| ..+.+.+.+++.... ..++++|+|
T Consensus 19 ~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~-----yv--~~rdg~vsviD--~~~~~~v~~i~~G~~-~~~i~~s~D 88 (369)
T PF02239_consen 19 AVIDGATNKVVARIPTGGAPHAGLKFSPDGRYL-----YV--ANRDGTVSVID--LATGKVVATIKVGGN-PRGIAVSPD 88 (369)
T ss_dssp EEEETTT-SEEEEEE-STTEEEEEE-TT-SSEE-----EE--EETTSEEEEEE--TTSSSEEEEEE-SSE-EEEEEE--T
T ss_pred EEEECCCCeEEEEEcCCCCceeEEEecCCCCEE-----EE--EcCCCeEEEEE--CCcccEEEEEecCCC-cceEEEcCC
Confidence 8889999999998886533 234445555541 22 23467888988 777888888876544 578999999
Q ss_pred CCEEEEEe-CCCeEEEEECCCCeeeeEecCC-------CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE-Ee
Q psy6127 233 GSLLISCS-DDDQIIIYDCEQGTSKNTINSK-------KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR-YF 303 (515)
Q Consensus 233 ~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~-~~ 303 (515)
|++++++. .++.+.++|.++.+.++.+... ...+..+..+|.....++.- ...+.|.+.|....+.+. ..
T Consensus 89 G~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~l-kd~~~I~vVdy~d~~~~~~~~ 167 (369)
T PF02239_consen 89 GKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNL-KDTGEIWVVDYSDPKNLKVTT 167 (369)
T ss_dssp TTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEE-TTTTEEEEEETTTSSCEEEEE
T ss_pred CCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEE-ccCCeEEEEEeccccccceee
Confidence 99998776 5799999999999998887543 34677888888888666655 345888888977654332 22
Q ss_pred cCCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCCeEEEEecCCCe---eEE-EECCCC----------CEEEEEEC
Q psy6127 304 PGHVRKVSSLNLSPVDDSFISG-SYDKTVRVWDLRQPNNVGMIQLSGNK---PIA-AYDPEG----------LAFAIGVN 368 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~---~~~-~~s~~~----------~~l~~g~~ 368 (515)
...........|+|++++++.+ ..++.|-++|.++++.+..+...... ... -.+|.. ...++.-.
T Consensus 168 i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig 247 (369)
T PF02239_consen 168 IKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIG 247 (369)
T ss_dssp EE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE
T ss_pred ecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceeccccc
Confidence 2344567889999999987664 55778999999998887766432211 111 123322 22212222
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE----ECCCcEEEEECCCCceeEEeeccccCCCCCE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS----TNGSIIRLFDAFNGNCVQSLSGVLNNNASPL 444 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~----s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~ 444 (515)
.+.+.+||....+ ..+.+. ....+ .-+.-+|+++++.+. ...+.|.++|.++.+....+....+ ..+.
T Consensus 248 ~~~v~v~d~~~wk--vv~~I~---~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~--~~~~ 319 (369)
T PF02239_consen 248 TDPVSVHDDYAWK--VVKTIP---TQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPG--KRVV 319 (369)
T ss_dssp --TTT-STTTBTS--EEEEEE----SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT----EE
T ss_pred CCccccchhhcCe--EEEEEE---CCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCC--CcEe
Confidence 2334445544432 222222 22333 468889999999988 3458999999999987777653332 2278
Q ss_pred EEEEecCCCEEEEEeCC--CcEEEEECCCCeEEEEEcC
Q psy6127 445 EATFTPDSQFVASGSTD--GQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~d--g~I~iwd~~~~~~~~~~~~ 480 (515)
.+.|+++|+.+..+..+ +.|.+||..+.+.+.+++.
T Consensus 320 h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~~ 357 (369)
T PF02239_consen 320 HMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIPV 357 (369)
T ss_dssp EEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE-
T ss_pred ccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEEe
Confidence 89999999977665543 3799999999999998873
|
... |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.1e-13 Score=127.95 Aligned_cols=284 Identities=14% Similarity=0.229 Sum_probs=200.9
Q ss_pred ccccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeecccc--CCcEEEEEEcCCCCEEEEEe
Q psy6127 164 SLSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFREN--TDKINSLDYSSDGSLLISCS 240 (515)
Q Consensus 164 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h--~~~I~~l~~spd~~~lasgs 240 (515)
.++.|+.+.. .-..++++++. +..++--..-|+++| +....+ .|.-| ...|.-.-.+.|-..++--.
T Consensus 44 LiQdfe~p~ast~ik~s~DGqY------~lAtG~YKP~ikvyd--lanLSL--KFERhlDae~V~feiLsDD~SK~v~L~ 113 (703)
T KOG2321|consen 44 LIQDFEMPTASTRIKVSPDGQY------LLATGTYKPQIKVYD--LANLSL--KFERHLDAEVVDFEILSDDYSKSVFLQ 113 (703)
T ss_pred HHHhcCCccccceeEecCCCcE------EEEecccCCceEEEE--ccccee--eeeecccccceeEEEeccchhhheEee
Confidence 3444554433 24555666665 444777777788887 444433 23334 33455455555656666667
Q ss_pred CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC
Q psy6127 241 DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD 320 (515)
Q Consensus 241 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 320 (515)
.|.+|.+.... |.. ..++.. ..-..++++.-..-+++++ ....|+-++++.|+.+..+....+.++++..++...
T Consensus 114 ~DR~IefHak~-G~h-y~~RIP-~~GRDm~y~~~scDly~~g--sg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hg 188 (703)
T KOG2321|consen 114 NDRTIEFHAKY-GRH-YRTRIP-KFGRDMKYHKPSCDLYLVG--SGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHG 188 (703)
T ss_pred cCceeeehhhc-Cee-eeeecC-cCCccccccCCCccEEEee--cCcceEEEEccccccccccccccccceeeeecCccc
Confidence 78888776532 221 112111 2234455554444455554 367899999999999999988889999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCCeEEEEecCCC------------eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceee
Q psy6127 321 SFISGSYDKTVRVWDLRQPNNVGMIQLSGN------------KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 321 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~------------~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~ 388 (515)
+|++|+.||.|..||.+....+..+..... ++++.|+.+|-.+++|+.+|.+.|||++.... .+
T Consensus 189 Lla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~p----l~ 264 (703)
T KOG2321|consen 189 LLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKP----LL 264 (703)
T ss_pred eEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCc----ee
Confidence 999999999999999999887777644333 78899999999999999999999999998652 22
Q ss_pred ecCCCCCcCeEEEEEcCC--CCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEE
Q psy6127 389 KCPGERGCEWTGLKFSPD--GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHI 466 (515)
Q Consensus 389 ~~~~~~~~~i~~l~~sp~--~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~i 466 (515)
........+|..+.|.+. ++.+++ .....++|||-.+|+....+.... .+..+++-|++.+++++-+++.+..
T Consensus 265 ~kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEpt~----~lND~C~~p~sGm~f~Ane~~~m~~ 339 (703)
T KOG2321|consen 265 VKDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEPTS----DLNDFCFVPGSGMFFTANESSKMHT 339 (703)
T ss_pred ecccCCccceeeecccccCCCceEEe-cchHHhhhcccccCCceeeccccC----CcCceeeecCCceEEEecCCCccee
Confidence 223455668889999875 344544 455689999999999888776432 3889999999999999998888877
Q ss_pred EECCC
Q psy6127 467 WNAER 471 (515)
Q Consensus 467 wd~~~ 471 (515)
|=+..
T Consensus 340 yyiP~ 344 (703)
T KOG2321|consen 340 YYIPS 344 (703)
T ss_pred EEccc
Confidence 76554
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-12 Score=116.81 Aligned_cols=238 Identities=12% Similarity=0.126 Sum_probs=162.3
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEE-EeCC------CcEEEEEcC
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFIS-GSYD------KTVRVWDLR 337 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~s~d------g~i~iwd~~ 337 (515)
....++|+.|...++++. |.-.++|+.+.-+.....+.+.+.+.-+..--..++++- |+.+ ..|.|||-.
T Consensus 7 ~~lsvs~NQD~ScFava~---~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~ 83 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVAT---DTGFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDL 83 (346)
T ss_pred ceeEEEEccCCceEEEEe---cCceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecc
Confidence 345589999988777765 888999998764433222222222222222222444443 3332 469999988
Q ss_pred CCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE-ECC
Q psy6127 338 QPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS-TNG 416 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~-s~d 416 (515)
...++.++....++..+.++++. +++. ..+.|.+|.....-+ ....+.......+ ..+++-+.+..+||.- -.-
T Consensus 84 k~~~i~el~f~~~I~~V~l~r~r--iVvv-l~~~I~VytF~~n~k-~l~~~et~~NPkG-lC~~~~~~~k~~LafPg~k~ 158 (346)
T KOG2111|consen 84 KERCIIELSFNSEIKAVKLRRDR--IVVV-LENKIYVYTFPDNPK-LLHVIETRSNPKG-LCSLCPTSNKSLLAFPGFKT 158 (346)
T ss_pred cCcEEEEEEeccceeeEEEcCCe--EEEE-ecCeEEEEEcCCChh-heeeeecccCCCc-eEeecCCCCceEEEcCCCcc
Confidence 88899999999999999998764 4443 467999999874321 2223332222222 2233322233455543 356
Q ss_pred CcEEEEECCCCce--eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCc-EEEEECCCCeEEEEEcC-CCCCCeEEEEEC
Q psy6127 417 SIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ-VHIWNAERGYKVCVLDG-DHPSAVQSLQFN 492 (515)
Q Consensus 417 g~i~iwd~~~~~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~-I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s 492 (515)
|.|++-|+...+. ...+..| ...|.+++.+-+|..+|++|..|+ |||||..+|+++..++. .....|.+++||
T Consensus 159 GqvQi~dL~~~~~~~p~~I~AH---~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS 235 (346)
T KOG2111|consen 159 GQVQIVDLASTKPNAPSIINAH---DSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS 235 (346)
T ss_pred ceEEEEEhhhcCcCCceEEEcc---cCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC
Confidence 8999999876654 3555554 444999999999999999999997 89999999999999875 234679999999
Q ss_pred CCCCEEEEee--CCEEEEcCCCC
Q psy6127 493 PKYHMLASAC--SNMAFWIPTLS 513 (515)
Q Consensus 493 p~~~~las~~--~dv~iW~~~~~ 513 (515)
|+..+||.+| +++.|+.+...
T Consensus 236 p~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 236 PNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred CCccEEEEEcCCCeEEEEEeecC
Confidence 9999999998 45888887653
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-12 Score=136.30 Aligned_cols=258 Identities=18% Similarity=0.192 Sum_probs=178.0
Q ss_pred EECCCCeeeeEecCCCCceeEEEEecCC-CeEEEEEeeCCCeEEEEECCCC-------eeeEEecCCCCCeEEEEEcCCC
Q psy6127 248 YDCEQGTSKNTINSKKYGVDLIKFTHSK-TTAIHASTKVDATLRYLSLHDN-------KYVRYFPGHVRKVSSLNLSPVD 319 (515)
Q Consensus 248 wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~~~d~~v~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~ 319 (515)
|+.+ |..+..+..|...+..++.++.. ..++ +|+.||+|++||.+.- +...++..-...+.++.+.+.+
T Consensus 1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~Fv--sgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~ 1110 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFV--SGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG 1110 (1431)
T ss_pred CCcc-ceEeehhhhccccccceeecCCCCceEE--EecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC
Confidence 6654 88889999999999999888776 4443 4468999999997531 2334454456789999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCCeE-------EEEec--CCCee-EEEECC-CC-CEEEEEECCCcEEEEEeecCCCCCcee
Q psy6127 320 DSFISGSYDKTVRVWDLRQPNNV-------GMIQL--SGNKP-IAAYDP-EG-LAFAIGVNSDSIKLYDVRSYDKGPFAS 387 (515)
Q Consensus 320 ~~l~s~s~dg~i~iwd~~~~~~~-------~~~~~--~~~~~-~~~~s~-~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~ 387 (515)
..+|.++.||.|.+.+++..+.. ..... .+.+. .-++.. .+ ..++.+..-+.|..||++...... .
T Consensus 1111 ~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w--~ 1188 (1431)
T KOG1240|consen 1111 DQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW--R 1188 (1431)
T ss_pred CeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH--h
Confidence 99999999999999998762211 11111 12221 222222 23 378888899999999999854211 1
Q ss_pred eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC---CEEEEEe--CCC
Q psy6127 388 FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS---QFVASGS--TDG 462 (515)
Q Consensus 388 ~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g---~~l~sgs--~dg 462 (515)
.+ .....+.|++++.+|.+++++.|+..|.+.+||++-+.++..+... ...++..+..+|-. ...++++ ..+
T Consensus 1189 lk-~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P--~~~~i~~v~~~~~~~~~S~~vs~~~~~~n 1265 (1431)
T KOG1240|consen 1189 LK-NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHP--ARAPIRHVWLCPTYPQESVSVSAGSSSNN 1265 (1431)
T ss_pred hh-cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCc--ccCCcceEEeeccCCCCceEEEecccCCC
Confidence 22 2234467999999999999999999999999999998888777532 33557777777643 4555544 568
Q ss_pred cEEEEECCCCeEEEEEcCC------------------CCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 463 QVHIWNAERGYKVCVLDGD------------------HPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 463 ~I~iwd~~~~~~~~~~~~~------------------h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
.|.+|++.+|.+...+... +.-.....++...+.++.+|+.| +|.||...+
T Consensus 1266 evs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p 1336 (1431)
T KOG1240|consen 1266 EVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRP 1336 (1431)
T ss_pred ceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCc
Confidence 8999999999776666431 11112223334445566676655 999998754
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4e-12 Score=128.97 Aligned_cols=236 Identities=12% Similarity=0.099 Sum_probs=155.6
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
.|.++|.+.+ ....+..+...+....|+|+|+.+++.+-. ....|.+||+.+++... +....+.+....|+|||+.|
T Consensus 180 ~l~~~d~~g~-~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~l 257 (430)
T PRK00178 180 TLQRSDYDGA-RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKL 257 (430)
T ss_pred EEEEECCCCC-CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEE
Confidence 4777787644 345565667788999999999999877622 12469999998886543 33334455678999999987
Q ss_pred E-EEeCCC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CC--cEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 323 I-SGSYDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SD--SIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 323 ~-s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
+ +.+.+| .|.+||+.+++...............|+|+|+.++..+. +| .|.++|+.+++. ..+.... .
T Consensus 258 a~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~---~~lt~~~---~ 331 (430)
T PRK00178 258 AFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA---ERVTFVG---N 331 (430)
T ss_pred EEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE---EEeecCC---C
Confidence 6 444455 588889998876554444444556889999998887764 33 466666655431 1221111 1
Q ss_pred CeEEEEEcCCCCEEEEEECC-C--cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC---CcEEEEECC
Q psy6127 397 EWTGLKFSPDGKLILVSTNG-S--IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD---GQVHIWNAE 470 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d---g~I~iwd~~ 470 (515)
......|+|+|++++..+.+ + .|.+||+.+++.. .+... .. .....|+|||+.++..+.+ ..+++++..
T Consensus 332 ~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~~-~~---~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 332 YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTDT-SL---DESPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccCC-CC---CCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 22357899999999877643 3 5888999887643 33221 11 2245899999988876644 347777874
Q ss_pred CCeEEEEEcCCCCCCeEEEEECCC
Q psy6127 471 RGYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 471 ~~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
|.....+.. +.+.+...+|+|-
T Consensus 407 -g~~~~~l~~-~~g~~~~p~ws~~ 428 (430)
T PRK00178 407 -GRVRLPLPT-AQGEVREPSWSPY 428 (430)
T ss_pred -CCceEECcC-CCCCcCCCccCCC
Confidence 444445554 5667888888874
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.9e-14 Score=133.60 Aligned_cols=221 Identities=19% Similarity=0.256 Sum_probs=155.9
Q ss_pred eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe-cCCCCCeEEEEEcCC--CCEEEEEeCCCcEE
Q psy6127 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF-PGHVRKVSSLNLSPV--DDSFISGSYDKTVR 332 (515)
Q Consensus 256 ~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~-~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~ 332 (515)
...+.+|++.|+|+.|+.+|..++.+ +.|-.+.|||.-..+.+..+ .+|...|.++.|-|. ++.+++|..|..|+
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SG--SDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASG--SDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhhccccceecceeecCCCCEEeec--CCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 35688999999999999999876644 58999999999887777665 689999999999985 45899999999999
Q ss_pred EEEcCCCC----------eEEEE-ecCCCeeEEEECCCC-CEEEEEECCCcEEEEEeecCCCCCcee-----eecCCCCC
Q psy6127 333 VWDLRQPN----------NVGMI-QLSGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPFAS-----FKCPGERG 395 (515)
Q Consensus 333 iwd~~~~~----------~~~~~-~~~~~~~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~-----~~~~~~~~ 395 (515)
++|+...+ ....+ .+...+.-++..|++ +.+.++++||+++-||++.....+... +......-
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l 200 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL 200 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence 99998522 11122 233446678888888 889999999999999999743211100 00011111
Q ss_pred cCeEEEEEcCC-CCEEEEEECCCcEEEEECCC--------Cc----------eeEEee-ccccC--------CCCCEEEE
Q psy6127 396 CEWTGLKFSPD-GKLILVSTNGSIIRLFDAFN--------GN----------CVQSLS-GVLNN--------NASPLEAT 447 (515)
Q Consensus 396 ~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~--------~~----------~~~~~~-~~~~~--------~~~i~~~~ 447 (515)
-...++..+|. ..+|++|+.|-..++||.+. +. +++.+. +|... ...++-++
T Consensus 201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt 280 (758)
T KOG1310|consen 201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT 280 (758)
T ss_pred heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence 24558899995 45889999999999999432 11 122221 11100 11256788
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 448 FTPDSQFVASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 448 ~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
|+|+|.-|+..-..-.|+++|+..++....+
T Consensus 281 fnpNGtElLvs~~gEhVYlfdvn~~~~~~~y 311 (758)
T KOG1310|consen 281 FNPNGTELLVSWGGEHVYLFDVNEDKSPTPY 311 (758)
T ss_pred ECCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence 9999987666555567999999887655444
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.3e-11 Score=113.85 Aligned_cols=269 Identities=15% Similarity=0.119 Sum_probs=174.5
Q ss_pred cEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCeeeeEecCCCC----
Q psy6127 199 TITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD----------DDQIIIYDCEQGTSKNTINSKKY---- 264 (515)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~----------dg~i~iwd~~~~~~~~~~~~~~~---- 264 (515)
+.+.+-| ..+++.+.++..-..+-. + +||||+.|+.+.. +..|.+||..+.+.+..+.....
T Consensus 27 ~~v~ViD--~~~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~ 102 (352)
T TIGR02658 27 TQVYTID--GEAGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL 102 (352)
T ss_pred ceEEEEE--CCCCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh
Confidence 4455555 555666666654333332 4 9999998887766 68999999999999988875432
Q ss_pred ---ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CC
Q psy6127 265 ---GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ-PN 340 (515)
Q Consensus 265 ---~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~-~~ 340 (515)
....++++|+|+.++++.-+.+..|.+.|+.+++.+....-. +...-...+++. .+ .-+.||......+.+ ++
T Consensus 103 ~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp-~~~~vy~t~e~~-~~-~~~~Dg~~~~v~~d~~g~ 179 (352)
T TIGR02658 103 VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP-DCYHIFPTANDT-FF-MHCRDGSLAKVGYGTKGN 179 (352)
T ss_pred ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC-CCcEEEEecCCc-cE-EEeecCceEEEEecCCCc
Confidence 234789999999999876445899999999999998877631 122222222211 11 223445444433322 11
Q ss_pred e-EEEEec--CCCe---eEEEECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecC-------CCCCcCeEEEEEcCC
Q psy6127 341 N-VGMIQL--SGNK---PIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP-------GERGCEWTGLKFSPD 406 (515)
Q Consensus 341 ~-~~~~~~--~~~~---~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~~i~~l~~sp~ 406 (515)
. ...... .... ..-.+.+ +|+++.+... |+|.+.|+.............. .-....+..++++|+
T Consensus 180 ~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~d 258 (352)
T TIGR02658 180 PKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRA 258 (352)
T ss_pred eEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCC
Confidence 1 111111 1000 0013455 7777776655 9999999654332211122111 112334455999999
Q ss_pred CCEEEEEE----------CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeE
Q psy6127 407 GKLILVST----------NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASGS-TDGQVHIWNAERGYK 474 (515)
Q Consensus 407 ~~~l~~~s----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs-~dg~I~iwd~~~~~~ 474 (515)
++++++.. ..+.|.++|..+++.+..+.... .+..++++|||+ +|++.. .++.|.++|..+++.
T Consensus 259 g~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~----~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~ 334 (352)
T TIGR02658 259 RDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH----EIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKE 334 (352)
T ss_pred CCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCC----ceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeE
Confidence 99988853 22579999999999998887532 378999999999 887666 578899999999999
Q ss_pred EEEEc
Q psy6127 475 VCVLD 479 (515)
Q Consensus 475 ~~~~~ 479 (515)
+..+.
T Consensus 335 i~~i~ 339 (352)
T TIGR02658 335 LSSVN 339 (352)
T ss_pred Eeeec
Confidence 99884
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-12 Score=115.98 Aligned_cols=157 Identities=15% Similarity=0.251 Sum_probs=110.2
Q ss_pred eEEEEecCCCeEEEEEee--------CCCeEEEEECCC-CeeeEEecC-CCCCeEEEEEcCCCCEEEEE--eCCCcEEEE
Q psy6127 267 DLIKFTHSKTTAIHASTK--------VDATLRYLSLHD-NKYVRYFPG-HVRKVSSLNLSPVDDSFISG--SYDKTVRVW 334 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~--------~d~~v~vwd~~~-~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~--s~dg~i~iw 334 (515)
..+.|+|+|+++++.+.. .-+...+|.++. +..+..+.- ..++|.+++|+|+|+.|+.. ..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 457899999988776641 113344555422 233333332 34579999999999976544 467899999
Q ss_pred EcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC---CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 335 DLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN---SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 335 d~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
|++ ++.+..+.. .....+.|+|+|+++++++. .|.+.+||+++.+ .+... .+ ..++.++|+|+|++++
T Consensus 89 d~~-~~~i~~~~~-~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~-----~i~~~-~~-~~~t~~~WsPdGr~~~ 159 (194)
T PF08662_consen 89 DVK-GKKIFSFGT-QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK-----KISTF-EH-SDATDVEWSPDGRYLA 159 (194)
T ss_pred cCc-ccEeEeecC-CCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE-----Eeecc-cc-CcEEEEEEcCCCCEEE
Confidence 997 666666653 44788999999999999874 4679999999643 33322 22 2467999999999999
Q ss_pred EEEC------CCcEEEEECCCCceeEEe
Q psy6127 412 VSTN------GSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 412 ~~s~------dg~i~iwd~~~~~~~~~~ 433 (515)
+++. |+.++||+. +|+.+...
T Consensus 160 ta~t~~r~~~dng~~Iw~~-~G~~l~~~ 186 (194)
T PF08662_consen 160 TATTSPRLRVDNGFKIWSF-QGRLLYKK 186 (194)
T ss_pred EEEeccceeccccEEEEEe-cCeEeEec
Confidence 8874 678999997 46655443
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.6e-12 Score=128.21 Aligned_cols=235 Identities=16% Similarity=0.177 Sum_probs=155.5
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
..|.++|.. +...+.+..+...+...+|+|+++.+++++.. ....|++||+.+++.... ..+...+.+++|+|||+.
T Consensus 170 ~~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~spDg~~ 247 (417)
T TIGR02800 170 YELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFSPDGSK 247 (417)
T ss_pred ceEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEECCCCCE
Confidence 467888875 34445565666678899999999998887621 125799999998865433 335566778999999997
Q ss_pred EEE-EeCCC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CC--cEEEEEeecCCCCCceeeecCCCCC
Q psy6127 322 FIS-GSYDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SD--SIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 322 l~s-~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
|+. .+.++ .|.+||+.++................|+|+|+.++..+. ++ .|.++|+.+.+. ..+. .+.
T Consensus 248 l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~---~~l~---~~~ 321 (417)
T TIGR02800 248 LAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV---RRLT---FRG 321 (417)
T ss_pred EEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE---EEee---cCC
Confidence 764 44444 588899988765544444333456789999999887664 33 466666654331 1111 123
Q ss_pred cCeEEEEEcCCCCEEEEEECCC---cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC---cEEEEEC
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGS---IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG---QVHIWNA 469 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg---~I~iwd~ 469 (515)
.....+.|+|+|++++.++.++ .|.+||+.++... .+.... . .....|+|+|++|+..+.++ .+++.+.
T Consensus 322 ~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~-~---~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 322 GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDTG-L---DESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCCC-C---CCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 3455789999999999888765 7899998876542 232211 1 34568999999888877654 3556564
Q ss_pred CCCeEEEEEcCCCCCCeEEEEEC
Q psy6127 470 ERGYKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 470 ~~~~~~~~~~~~h~~~V~~l~~s 492 (515)
+++....+.. +.+.+..++|+
T Consensus 397 -~g~~~~~~~~-~~g~~~~~~ws 417 (417)
T TIGR02800 397 -DGRFRARLPL-GNGDVREPAWS 417 (417)
T ss_pred -CCceeeECCC-CCCCcCCCCCC
Confidence 4555555554 45556555553
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.7e-12 Score=119.80 Aligned_cols=270 Identities=16% Similarity=0.283 Sum_probs=186.3
Q ss_pred cEEEEEEcCCCCEEEEE-----eCC-----CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 223 KINSLDYSSDGSLLISC-----SDD-----DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 223 ~I~~l~~spd~~~lasg-----s~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
.++++.|+|-|.+|.+= ..+ -.+++|+++++.....+......-++..|+.|....+-.. .+.+.+|
T Consensus 75 ~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv---~nev~f~ 151 (566)
T KOG2315|consen 75 KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLV---SNEVQFY 151 (566)
T ss_pred eeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhhhh---cceEEEE
Confidence 78999999999998752 122 3577999999766665554433337899999987655443 7889999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCC--EEEE-----EeCCCcEEEEEcCCCCeEE-----EEecCCCeeEEEECCCC
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDD--SFIS-----GSYDKTVRVWDLRQPNNVG-----MIQLSGNKPIAAYDPEG 360 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s-----~s~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~s~~~ 360 (515)
+..+.+.+. -.-|...|+.+.++|.+. .+++ .|.-+.|++|.......-. .+-. ..-..+.|++-|
T Consensus 152 ~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFk-adkvqm~WN~~g 229 (566)
T KOG2315|consen 152 DLGSFKTIQ-HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFK-ADKVQMKWNKLG 229 (566)
T ss_pred ecCCcccee-eeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccc-cceeEEEeccCC
Confidence 987744332 223678899999999743 4443 3445679999876322211 1111 123457788776
Q ss_pred CEEEE-EE-----------CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEE--EECCCcEEEEECCC
Q psy6127 361 LAFAI-GV-----------NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILV--STNGSIIRLFDAFN 426 (515)
Q Consensus 361 ~~l~~-g~-----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~--~s~dg~i~iwd~~~ 426 (515)
.-|++ .+ .+.+++++++.. . .........++|.++.|+|+++-+++ |-+-..+.+||++
T Consensus 230 t~LLvLastdVDktn~SYYGEq~Lyll~t~g-~-----s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr- 302 (566)
T KOG2315|consen 230 TALLVLASTDVDKTNASYYGEQTLYLLATQG-E-----SVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR- 302 (566)
T ss_pred ceEEEEEEEeecCCCccccccceEEEEEecC-c-----eEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-
Confidence 54332 22 134677777772 2 33333456789999999999987765 4466789999974
Q ss_pred CceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC---CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-
Q psy6127 427 GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD---GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC- 502 (515)
Q Consensus 427 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~- 502 (515)
++++..+.. ++-+++-|+|.|++++.++-+ |.+-|||+.+.+++..+.. ..-+-+.|+|||.+++++.
T Consensus 303 ~~~v~df~e-----gpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a---~~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 303 GKPVFDFPE-----GPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA---ANTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred CCEeEeCCC-----CCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc---CCceEEEEcCCCcEEEEEec
Confidence 555555432 224689999999999888754 7899999999999988875 3345689999999999886
Q ss_pred -------CCEEEEcCCC
Q psy6127 503 -------SNMAFWIPTL 512 (515)
Q Consensus 503 -------~dv~iW~~~~ 512 (515)
..++||.+.-
T Consensus 375 aPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 375 APRLRVDNGIKIWHYTG 391 (566)
T ss_pred cccEEecCCeEEEEecC
Confidence 2389998864
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.2e-12 Score=127.84 Aligned_cols=236 Identities=14% Similarity=0.112 Sum_probs=152.7
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC-CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV-DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~-d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
.+.++|..... .+.+..+...+....|+|||+.+++++... ...|++||+.+++.... ....+.....+|+|||+.|
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~l-t~~~g~~~~~~wSPDG~~L 276 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKV-TSFPGINGAPRFSPDGKKL 276 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEe-cCCCCCcCCeeECCCCCEE
Confidence 67777865433 345556667889999999999998876321 23689999988765332 2223334578999999977
Q ss_pred EE-EeCCCc--EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CCc--EEEEEeecCCCCCceeeecCCCCCc
Q psy6127 323 IS-GSYDKT--VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SDS--IKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 323 ~s-~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
+. .+.++. |.++|+.+++..............+|+|||+.++..+. ++. |.++|+.+++. ..+.. .. .
T Consensus 277 a~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~---~~Lt~-~g--~ 350 (448)
T PRK04792 277 ALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV---SRLTF-EG--E 350 (448)
T ss_pred EEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE---EEEec-CC--C
Confidence 65 556665 77889888876544444444567899999999887664 344 55555554331 12211 11 1
Q ss_pred CeEEEEEcCCCCEEEEEEC-CC--cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-C--cEEEEECC
Q psy6127 397 EWTGLKFSPDGKLILVSTN-GS--IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-G--QVHIWNAE 470 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-g--~I~iwd~~ 470 (515)
.....+|+|||++++..+. ++ .|.++|+.+++.. .+.... . .....|+|||+.|+..+.+ | .+++++.
T Consensus 351 ~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~-~---d~~ps~spdG~~I~~~~~~~g~~~l~~~~~- 424 (448)
T PRK04792 351 QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR-L---DESPSVAPNGTMVIYSTTYQGKQVLAAVSI- 424 (448)
T ss_pred CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCCC-C---CCCceECCCCCEEEEEEecCCceEEEEEEC-
Confidence 2235789999999887664 33 4566788777643 232211 1 2245799999988766543 3 3777786
Q ss_pred CCeEEEEEcCCCCCCeEEEEECCC
Q psy6127 471 RGYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 471 ~~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
+|.....+.. +.+.+...+|+|-
T Consensus 425 ~G~~~~~l~~-~~g~~~~p~Wsp~ 447 (448)
T PRK04792 425 DGRFKARLPA-GQGEVKSPAWSPF 447 (448)
T ss_pred CCCceEECcC-CCCCcCCCccCCC
Confidence 5666666765 5667888899883
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=8e-12 Score=126.76 Aligned_cols=222 Identities=10% Similarity=0.112 Sum_probs=146.8
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC--eE
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDD---DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA--TL 289 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~--~v 289 (515)
+.+..+...+...+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+....|+|+|+.+++... .++ .|
T Consensus 192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~-~~g~~~I 269 (430)
T PRK00178 192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLS-KDGNPEI 269 (430)
T ss_pred eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEc-cCCCceE
Confidence 4455677889999999999999887644 468999998876543 3333344567899999998886552 333 68
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-DK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
++||+.+++.. .+..+........|+|||+.++..+. ++ .|.++|+.+++...............|+|+|+.++..
T Consensus 270 y~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~ 348 (430)
T PRK00178 270 YVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMV 348 (430)
T ss_pred EEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEE
Confidence 89999887654 35556666777899999998776654 33 5777888887754433222223457899999999887
Q ss_pred ECC-C--cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCceeEEeeccccCC
Q psy6127 367 VNS-D--SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG---SIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 367 ~~d-g--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
+.+ + .|.++|+.++.. ..+.. .. ......|+|||++++..+.+ ..+.+++.. +.....+... .
T Consensus 349 ~~~~~~~~l~~~dl~tg~~---~~lt~-~~---~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~---~ 417 (430)
T PRK00178 349 HRQDGNFHVAAQDLQRGSV---RILTD-TS---LDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTA---Q 417 (430)
T ss_pred EccCCceEEEEEECCCCCE---EEccC-CC---CCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCC---C
Confidence 653 3 477888876542 11211 11 11256899999999877643 346677764 4333344322 2
Q ss_pred CCCEEEEEec
Q psy6127 441 ASPLEATFTP 450 (515)
Q Consensus 441 ~~i~~~~~sp 450 (515)
..+...+|+|
T Consensus 418 g~~~~p~ws~ 427 (430)
T PRK00178 418 GEVREPSWSP 427 (430)
T ss_pred CCcCCCccCC
Confidence 2255566765
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.3e-12 Score=118.76 Aligned_cols=242 Identities=15% Similarity=0.170 Sum_probs=179.3
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE------ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY------FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDL 336 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~------~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~ 336 (515)
...+..++|.-+++.-++...+.+..+..+.+....+... ......+|..++.. +..|++|-.+|.+.+|..
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~~ 132 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVRHD 132 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEEec
Confidence 3567778888777776666655677777777766554433 23455677777665 557888899999999998
Q ss_pred CCCC----eEEEEecCCCeeEEEECCCC-CEEEEEECC--CcEEEEEeecCCCCCceeeecCC------CCCcCeEEEEE
Q psy6127 337 RQPN----NVGMIQLSGNKPIAAYDPEG-LAFAIGVNS--DSIKLYDVRSYDKGPFASFKCPG------ERGCEWTGLKF 403 (515)
Q Consensus 337 ~~~~----~~~~~~~~~~~~~~~~s~~~-~~l~~g~~d--g~i~i~d~~~~~~~~~~~~~~~~------~~~~~i~~l~~ 403 (515)
+.+. ....+.....+..+.-++.. ..+++|+.. ..+.+||+.... + +..-+... ...-.++.+.|
T Consensus 133 k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~-q-iw~aKNvpnD~L~LrVPvW~tdi~F 210 (412)
T KOG3881|consen 133 KSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSK-Q-IWSAKNVPNDRLGLRVPVWITDIRF 210 (412)
T ss_pred cCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccce-e-eeeccCCCCccccceeeeeecccee
Confidence 8543 33444555556667666654 455668888 889999998752 1 11111111 11235678899
Q ss_pred cCC--CCEEEEEECCCcEEEEECCCCc-eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE-Ec
Q psy6127 404 SPD--GKLILVSTNGSIIRLFDAFNGN-CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV-LD 479 (515)
Q Consensus 404 sp~--~~~l~~~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~-~~ 479 (515)
-|. ...|++++.-+.+++||.+.++ ++..+.. ...++.++...|+|+++++|..-|.+..+|.+.++.... +.
T Consensus 211 l~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~---~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~k 287 (412)
T KOG3881|consen 211 LEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDF---LENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLK 287 (412)
T ss_pred cCCCCCceEEEEecceeEEEecCcccCcceeEecc---ccCcceeeeecCCCcEEEEecccchhheecccCceeeccccC
Confidence 887 7899999999999999998764 4444443 344599999999999999999999999999999999887 55
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 480 GDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 480 ~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
+ ..+.|+++..+|.++++|+++=| +||+|++.
T Consensus 288 g-~tGsirsih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 288 G-ITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred C-ccCCcceEEEcCCCceEEeeccceeEEEeeccc
Confidence 5 89999999999999999999866 99999876
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.3e-11 Score=122.18 Aligned_cols=242 Identities=11% Similarity=0.054 Sum_probs=152.3
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEE--EEe-eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCC
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIH--AST-KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD 319 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~s~-~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 319 (515)
..|.+.|...+ ..+.+.........-+|+|||+.+.+ .+. .....|.+.++.+++..... ...+.....+|+|||
T Consensus 165 ~~l~~~d~dG~-~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt-~~~g~~~~p~wSPDG 242 (428)
T PRK01029 165 GELWSVDYDGQ-NLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL-ALQGNQLMPTFSPRK 242 (428)
T ss_pred ceEEEEcCCCC-CceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee-cCCCCccceEECCCC
Confidence 36777777644 33445555566778899999987433 331 11346888899877644332 234445678999999
Q ss_pred CEEEEEeC-----CCcEEEEEcCCC---CeEEEEecC-CCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCC-CCCceee
Q psy6127 320 DSFISGSY-----DKTVRVWDLRQP---NNVGMIQLS-GNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYD-KGPFASF 388 (515)
Q Consensus 320 ~~l~s~s~-----dg~i~iwd~~~~---~~~~~~~~~-~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~-~~~~~~~ 388 (515)
+.|+..+. |-.+..|++..+ +........ ......+|+|||+.|+..+ .+|...+|.+.... ......+
T Consensus 243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~l 322 (428)
T PRK01029 243 KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLL 322 (428)
T ss_pred CEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEe
Confidence 98876553 223455777653 333333222 2345689999999888776 46666666554211 1111111
Q ss_pred ecCCCCCcCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC---CC
Q psy6127 389 KCPGERGCEWTGLKFSPDGKLILVSTNG---SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST---DG 462 (515)
Q Consensus 389 ~~~~~~~~~i~~l~~sp~~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~---dg 462 (515)
. .....+....|+|||++|+..+.+ ..|.+||+.+++....... ...+....|+|||+.|+.... ..
T Consensus 323 t---~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~----~~~~~~p~wSpDG~~L~f~~~~~g~~ 395 (428)
T PRK01029 323 T---KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS----PENKESPSWAIDSLHLVYSAGNSNES 395 (428)
T ss_pred c---cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC----CCCccceEECCCCCEEEEEECCCCCc
Confidence 1 222345678999999999876643 4699999988876433222 122567899999998875433 35
Q ss_pred cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCC
Q psy6127 463 QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKY 495 (515)
Q Consensus 463 ~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~ 495 (515)
.|+++|+..++...... ..+.+...+|+|-.
T Consensus 396 ~L~~vdl~~g~~~~Lt~--~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 396 ELYLISLITKKTRKIVI--GSGEKRFPSWGAFP 426 (428)
T ss_pred eEEEEECCCCCEEEeec--CCCcccCceecCCC
Confidence 68899998877655443 44567788998853
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.8e-12 Score=126.99 Aligned_cols=224 Identities=15% Similarity=0.168 Sum_probs=149.6
Q ss_pred CcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeeEecCCCCceeEEEEecC
Q psy6127 198 RTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD---DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 274 (515)
...+.++| .. +...+.+..+...+.+.+|+|||++|+.++.+ ..|++||+.+++... +..+...+.+++|+|+
T Consensus 169 ~~~l~~~d--~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spD 244 (417)
T TIGR02800 169 RYELQVAD--YD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPD 244 (417)
T ss_pred cceEEEEc--CC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCC
Confidence 33455555 22 22234455677789999999999999988754 489999998876543 3344556677999999
Q ss_pred CCeEEEEEe-eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC-C--cEEEEEcCCCCeEEEEecCCC
Q psy6127 275 KTTAIHAST-KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD-K--TVRVWDLRQPNNVGMIQLSGN 350 (515)
Q Consensus 275 ~~~l~~~s~-~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-g--~i~iwd~~~~~~~~~~~~~~~ 350 (515)
++.+++... ..+..|++||+.+++.. .+..+........|+|||+.|+..+.. + .|.++|+.+++..........
T Consensus 245 g~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~ 323 (417)
T TIGR02800 245 GSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGY 323 (417)
T ss_pred CCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCC
Confidence 998876642 12346999999877543 344455555678999999988766543 3 588888887765544434444
Q ss_pred eeEEEECCCCCEEEEEECCC---cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC---cEEEEEC
Q psy6127 351 KPIAAYDPEGLAFAIGVNSD---SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS---IIRLFDA 424 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg---~i~iwd~ 424 (515)
.....|+|+|++++.++.++ .|.+||+.+... ..+. .. .......|+|+|++|+..+.++ .+++.+.
T Consensus 324 ~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~---~~l~--~~--~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 324 NASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE---RVLT--DT--GLDESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred ccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe---EEcc--CC--CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 66789999999999988765 788888876331 1111 11 1123568999999988877654 3455553
Q ss_pred CCCceeEEee
Q psy6127 425 FNGNCVQSLS 434 (515)
Q Consensus 425 ~~~~~~~~~~ 434 (515)
+++....+.
T Consensus 397 -~g~~~~~~~ 405 (417)
T TIGR02800 397 -DGRFRARLP 405 (417)
T ss_pred -CCceeeECC
Confidence 344444443
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.9e-12 Score=126.12 Aligned_cols=222 Identities=13% Similarity=0.133 Sum_probs=142.9
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC--eE
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDD---DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA--TL 289 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~--~v 289 (515)
+.+..+...+.+..|+|||+.|+..+.+ ..|.+||+.+++... +..........+|+|+++.++++. +.++ .|
T Consensus 211 ~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~-~~~g~~~I 288 (448)
T PRK04792 211 QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVL-SKDGQPEI 288 (448)
T ss_pred eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEE-eCCCCeEE
Confidence 3445567788899999999999877643 368889998776533 322233445789999999988765 3455 48
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-DK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
+++|+.+++.. .+..+.......+|+|||+.|+..+. ++ .|.++|+.+++..............+|+|+|++++..
T Consensus 289 y~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~ 367 (448)
T PRK04792 289 YVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMV 367 (448)
T ss_pred EEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEE
Confidence 88898877654 44445566778899999998776554 33 4666788777754433222223457899999998886
Q ss_pred EC-CCc--EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-C--cEEEEECCCCceeEEeeccccCC
Q psy6127 367 VN-SDS--IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-S--IIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 367 ~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-g--~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
+. ++. |.++|+.++.. ..+. ... ......|+|||++|+..+.+ + .+++++. +|.....+....+
T Consensus 368 ~~~~g~~~I~~~dl~~g~~---~~lt--~~~--~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g-- 437 (448)
T PRK04792 368 NRTNGKFNIARQDLETGAM---QVLT--STR--LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQG-- 437 (448)
T ss_pred EecCCceEEEEEECCCCCe---EEcc--CCC--CCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCC--
Confidence 65 344 44456555431 1111 111 11245799999988876643 3 3677776 5655555544322
Q ss_pred CCCEEEEEec
Q psy6127 441 ASPLEATFTP 450 (515)
Q Consensus 441 ~~i~~~~~sp 450 (515)
.+...+|+|
T Consensus 438 -~~~~p~Wsp 446 (448)
T PRK04792 438 -EVKSPAWSP 446 (448)
T ss_pred -CcCCCccCC
Confidence 256677776
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5e-11 Score=113.60 Aligned_cols=325 Identities=13% Similarity=0.186 Sum_probs=219.7
Q ss_pred CCcchhhccccccccCCceeEE--EEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCC
Q psy6127 155 GSWDFELLHSLSSLESPHFVSL--FVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSD 232 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd 232 (515)
..|+..+...-..++...+.+. +.++++.. |+ +....+ |.+|.. ..+..+..+. ...|.-+.|+|.
T Consensus 15 ~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~------l~-~~~~~~-V~~~~g--~~~~~l~~~~--~~~V~~~~fSP~ 82 (561)
T COG5354 15 VFWNSQSEVIHTRFESENWPVAYVSESPLGTY------LF-SEHAAG-VECWGG--PSKAKLVRFR--HPDVKYLDFSPN 82 (561)
T ss_pred EeecCccccccccccccCcchhheeecCcchh------ee-hhhccc-eEEccc--cchhheeeee--cCCceecccCcc
Confidence 4577776666666665666544 44444444 22 333333 888883 3333222222 356899999999
Q ss_pred CCEEEEEeCCC---------------eEEEEECCCCeeeeEecCCCCc--ee-EEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 233 GSLLISCSDDD---------------QIIIYDCEQGTSKNTINSKKYG--VD-LIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 233 ~~~lasgs~dg---------------~i~iwd~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
++||.+=+..+ .+.+||+.+|..+..+.....+ .+ -+.|+-+..+.+-.. ...+.++++
T Consensus 83 ~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv---~~sl~i~e~ 159 (561)
T COG5354 83 EKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVV---GSSLYIHEI 159 (561)
T ss_pred cceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhc---cCeEEEEec
Confidence 99999876543 4999999999999998877665 55 788999888776664 568999997
Q ss_pred CCCeee----EEecCCCCCeEEEEEcCCCC--EEEE-----EeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCE
Q psy6127 295 HDNKYV----RYFPGHVRKVSSLNLSPVDD--SFIS-----GSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLA 362 (515)
Q Consensus 295 ~~~~~~----~~~~~h~~~v~~l~~~~~~~--~l~s-----~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~ 362 (515)
++... ..++ ...|....|+|.++ .|+. .+.++++++|.+..+..+..-..- -....+.|.+.|++
T Consensus 160 -t~n~~~~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ 236 (561)
T COG5354 160 -TDNIEEHPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKY 236 (561)
T ss_pred -CCccccCchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCce
Confidence 33221 1221 35688889999744 3443 456789999999877766554322 22456889999988
Q ss_pred EEEEE-----------CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE--CCCcEEEEECCCCce
Q psy6127 363 FAIGV-----------NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST--NGSIIRLFDAFNGNC 429 (515)
Q Consensus 363 l~~g~-----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s--~dg~i~iwd~~~~~~ 429 (515)
+++-. ....+++++++.. .+.......++|...+|.|.++.+++.+ .+..+.++|++.. .
T Consensus 237 ll~l~~t~~ksnKsyfgesnLyl~~~~e~------~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l 309 (561)
T COG5354 237 LLVLVMTHTKSNKSYFGESNLYLLRITER------SIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-L 309 (561)
T ss_pred EEEEEEEeeecccceeccceEEEEeeccc------ccceeccccccceeeeecccCCceeEEecccccceeecccccc-e
Confidence 76532 2356788888742 2332235567899999999998777654 7888999998765 3
Q ss_pred eEEeeccccCCCCCEEEEEecCCCEEEEEeCC---CcEEEEECCCCeEEE-EEcCCCCCCeEEEEECCCCCEEEEee---
Q psy6127 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTD---GQVHIWNAERGYKVC-VLDGDHPSAVQSLQFNPKYHMLASAC--- 502 (515)
Q Consensus 430 ~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d---g~I~iwd~~~~~~~~-~~~~~h~~~V~~l~~sp~~~~las~~--- 502 (515)
...+.. ..-..+.|+|.+++++.++-| |.+-+||......+. .+.+ ....-+.|+||+.++.++.
T Consensus 310 ~~~~Pe-----~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~---~n~s~~~wspd~qF~~~~~ts~ 381 (561)
T COG5354 310 RFYFPE-----QKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG---LNTSYCDWSPDGQFYDTDTTSE 381 (561)
T ss_pred EEecCC-----cccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec---CCceEeeccCCceEEEecCCCc
Confidence 333221 123568899999999988765 679999998776555 6654 3345678999999887763
Q ss_pred -----CCEEEEcCCC
Q psy6127 503 -----SNMAFWIPTL 512 (515)
Q Consensus 503 -----~dv~iW~~~~ 512 (515)
..++||++.-
T Consensus 382 k~~~Dn~i~l~~v~g 396 (561)
T COG5354 382 KLRVDNSIKLWDVYG 396 (561)
T ss_pred ccccCcceEEEEecC
Confidence 1289999753
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.5e-12 Score=119.87 Aligned_cols=319 Identities=13% Similarity=0.182 Sum_probs=199.2
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCC---cEEEEccceeeeeEeeeeccccCCcEEEEEEcC
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSR---TITKCSENLVRSYRVAKVFRENTDKINSLDYSS 231 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~---~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~sp 231 (515)
.+.+..++..+.+....+..-+-+++.+....+....+...++. .-+.+|+ +.+......+..-...=++..|++
T Consensus 58 ~i~~~~~~~~~lt~~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~--vet~~~~s~~q~k~Q~~W~~qfs~ 135 (566)
T KOG2315|consen 58 KVFEIATLKVVLCVELKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYN--VETGVQRSQIQKKMQNGWVPQFSI 135 (566)
T ss_pred EEEEccCCcEEEEeccceeeeeeecccccccccccccccccCCCCCCCceeeee--eccceehhheehhhhcCccccccc
Confidence 66666666544444433333444444444433322222222222 2256677 555433333333222226899999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEE-----eeCCCeEEEEECCCCeeeEEe---
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAS-----TKVDATLRYLSLHDNKYVRYF--- 303 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s-----~~~d~~v~vwd~~~~~~~~~~--- 303 (515)
|..+.|-- ..+.+.+|+..+.+.+ .-.-|...++.+.++|.+....++. .+.-..|++|..........+
T Consensus 136 dEsl~arl-v~nev~f~~~~~f~~~-~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~k 213 (566)
T KOG2315|consen 136 DESLAARL-VSNEVQFYDLGSFKTI-QHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANK 213 (566)
T ss_pred chhhhhhh-hcceEEEEecCCccce-eeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhc
Confidence 88654322 3467999998763322 2233567799999998754333332 234567999987633221111
Q ss_pred cCCCCCeEEEEEcCCCC-EEEEE--eCC---------CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEE--EECC
Q psy6127 304 PGHVRKVSSLNLSPVDD-SFISG--SYD---------KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAI--GVNS 369 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~~-~l~s~--s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~--g~~d 369 (515)
.-....=..+.|++-|. +|+.+ .-| .++.+.++....+...+...++|.++.|+|+++.+++ |..-
T Consensus 214 sFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMP 293 (566)
T KOG2315|consen 214 SFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMP 293 (566)
T ss_pred cccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEeccc
Confidence 01122234577888777 33333 223 3688888886666666777889999999999987765 5567
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCceeEEeeccccCCCCCEEE
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN---GSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 446 (515)
..+.+||++..- .+.. ..++-+++-|+|.|++++.++- .|.+.+||+.+.+++..+.... .+-+
T Consensus 294 Akvtifnlr~~~-----v~df---~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~-----tt~~ 360 (566)
T KOG2315|consen 294 AKVTIFNLRGKP-----VFDF---PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN-----TTVF 360 (566)
T ss_pred ceEEEEcCCCCE-----eEeC---CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC-----ceEE
Confidence 889999998632 2222 2334458999999999998874 4789999999988887776432 4678
Q ss_pred EEecCCCEEEEEeC------CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 447 TFTPDSQFVASGST------DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 447 ~~sp~g~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
.|+|||+++++++. |+.++||++ +|..+.... .....+.+.|-|
T Consensus 361 eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~~~--f~sEL~qv~W~P 410 (566)
T KOG2315|consen 361 EWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHEKM--FKSELLQVEWRP 410 (566)
T ss_pred EEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeehhh--hhHhHhheeeee
Confidence 99999999998863 678999997 576665443 222577788876
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-10 Score=119.57 Aligned_cols=179 Identities=19% Similarity=0.159 Sum_probs=130.9
Q ss_pred CCcCCCcchhhccccccccCCceeEEE-EEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEE
Q psy6127 151 YNKLGSWDFELLHSLSSLESPHFVSLF-VTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDY 229 (515)
Q Consensus 151 ~n~~~~wd~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~ 229 (515)
+|.+-+||.+.+..+.......-..+. ...........+ .+ +++--+-+.+|+.. ..-++ ..+.||.+.|.++.|
T Consensus 108 ~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~-i~-~gsv~~~iivW~~~-~dn~p-~~l~GHeG~iF~i~~ 183 (967)
T KOG0974|consen 108 RNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELY-IA-SGSVFGEIIVWKPH-EDNKP-IRLKGHEGSIFSIVT 183 (967)
T ss_pred CceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEE-EE-eccccccEEEEecc-ccCCc-ceecccCCceEEEEE
Confidence 344488999888888777666443222 222222211111 11 23333335556532 11122 268899999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeee-EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC-
Q psy6127 230 SSDGSLLISCSDDDQIIIYDCEQGTSKN-TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV- 307 (515)
Q Consensus 230 spd~~~lasgs~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~- 307 (515)
+-||+++++.|+|.++|+|++++.+... +.-+|+..+..+.|.|. .++++ +.|.+.++|+.+ +..+..+.+|.
T Consensus 184 s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~--gedctcrvW~~~-~~~l~~y~~h~g 258 (967)
T KOG0974|consen 184 SLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITV--GEDCTCRVWGVN-GTQLEVYDEHSG 258 (967)
T ss_pred ccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEe--ccceEEEEEecc-cceehhhhhhhh
Confidence 9999999999999999999999988776 77789999999999998 55555 489999999755 45555787776
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy6127 308 RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 308 ~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~ 338 (515)
..++.++..++....++++.|+.+++||+..
T Consensus 259 ~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 259 KGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred cceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 4699999999999999999999999999853
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.4e-10 Score=102.48 Aligned_cols=268 Identities=12% Similarity=0.199 Sum_probs=180.4
Q ss_pred CCeEEEEECCCCeee---eEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCC--Ceee--EEecCCCCCeEEE
Q psy6127 242 DDQIIIYDCEQGTSK---NTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHD--NKYV--RYFPGHVRKVSSL 313 (515)
Q Consensus 242 dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~--~~~~--~~~~~h~~~v~~l 313 (515)
+.-|.+|++.+.+-. ..+-......+-++|+|+.+.++++... .+|.|..|.++. |+.. ........+-..+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 456999998743211 1223455778899999999998887642 367788777764 4432 2222223344889
Q ss_pred EEcCCCCEEEEEeC-CCcEEEEEcCC-CCe---EEEEecCCC----------eeEEEECCCCCEEEEEE-CCCcEEEEEe
Q psy6127 314 NLSPVDDSFISGSY-DKTVRVWDLRQ-PNN---VGMIQLSGN----------KPIAAYDPEGLAFAIGV-NSDSIKLYDV 377 (515)
Q Consensus 314 ~~~~~~~~l~s~s~-dg~i~iwd~~~-~~~---~~~~~~~~~----------~~~~~~s~~~~~l~~g~-~dg~i~i~d~ 377 (515)
+++++|++++++.. -|.|.++-++. |.. +....+.+. +....+.|+++++++.. ....|.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 99999999888875 57899998865 322 233333333 66789999999998876 3458999999
Q ss_pred ecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCC-ceeEEeec------cccCCCCCEEEEEe
Q psy6127 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAFNG-NCVQSLSG------VLNNNASPLEATFT 449 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~~~-~~~~~~~~------~~~~~~~i~~~~~s 449 (515)
..+...+...... ......+.|.|+|++++.++.++ +++|.+|..... ..+..++. ..........+..+
T Consensus 175 ~dg~L~~~~~~~v--~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis 252 (346)
T COG2706 175 DDGKLTPADPAEV--KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHIS 252 (346)
T ss_pred ccCcccccccccc--CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEEC
Confidence 9765444333333 44455679999999999887764 889999998763 22222222 12223346788999
Q ss_pred cCCCEEEEEeC-CCcEEEEECCC--CeEE--EEEcCCCCCCeEEEEECCCCCEEEEeeCC---EEEEcCCC
Q psy6127 450 PDSQFVASGST-DGQVHIWNAER--GYKV--CVLDGDHPSAVQSLQFNPKYHMLASACSN---MAFWIPTL 512 (515)
Q Consensus 450 p~g~~l~sgs~-dg~I~iwd~~~--~~~~--~~~~~~h~~~V~~l~~sp~~~~las~~~d---v~iW~~~~ 512 (515)
|||++|+++.. ...|.+|.+.. +++. ..... +...-.++.|+|++++|+++..+ +.++..+-
T Consensus 253 ~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~t-eg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~ 322 (346)
T COG2706 253 PDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPT-EGQFPRDFNINPSGRFLIAANQKSDNITVFERDK 322 (346)
T ss_pred CCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEecc-CCcCCccceeCCCCCEEEEEccCCCcEEEEEEcC
Confidence 99999998753 24688887653 3322 22222 44457899999999999998743 88887653
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=5e-11 Score=114.56 Aligned_cols=290 Identities=13% Similarity=0.226 Sum_probs=192.9
Q ss_pred CCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC-----------CeEEEEECCCCeeeeEecCCC
Q psy6127 195 RSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD-----------DQIIIYDCEQGTSKNTINSKK 263 (515)
Q Consensus 195 ~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d-----------g~i~iwd~~~~~~~~~~~~~~ 263 (515)
-...+ |.+|. -+.+..++.|. |. .|.-+.|||..+||+|-|.. ..++|||+.+|...+.+....
T Consensus 228 ~Hk~G-I~lWG--G~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~ 302 (698)
T KOG2314|consen 228 FHKQG-IALWG--GESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIK 302 (698)
T ss_pred Eeccc-eeeec--CccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccC
Confidence 33444 67777 44555555443 43 48889999999999987642 579999999999988886632
Q ss_pred --Cc-eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEE
Q psy6127 264 --YG-VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD-----KTVRVWD 335 (515)
Q Consensus 264 --~~-v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd 335 (515)
.. -.-..||.|+++++-.+ ..+|.|++..+...+..-.-.-..|....|+|.++.||-=... ..+.+-.
T Consensus 303 ~~~~~WP~frWS~DdKy~Arm~---~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~e 379 (698)
T KOG2314|consen 303 SPYLKWPIFRWSHDDKYFARMT---GNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLME 379 (698)
T ss_pred CCccccceEEeccCCceeEEec---cceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEe
Confidence 22 33578999999988876 4789999877654443322334678889999998877754321 3466667
Q ss_pred cCCCCeEEEEecCCC-eeEEEECCCCCEEEEEEC----------CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEc
Q psy6127 336 LRQPNNVGMIQLSGN-KPIAAYDPEGLAFAIGVN----------SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFS 404 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~-~~~~~~s~~~~~l~~g~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~s 404 (515)
+.+++.+++-....- -..+-|-.+|.+|+.--. -..+.|+.++..+. +...+ .-...|...+|-
T Consensus 380 vPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdI-pve~v----elke~vi~FaWE 454 (698)
T KOG2314|consen 380 VPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDI-PVEVV----ELKESVIAFAWE 454 (698)
T ss_pred cCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCC-Cceee----ecchheeeeeec
Confidence 777776666544331 233677788888876321 12356666665331 11111 223467789999
Q ss_pred CCCCEEEEEEC---CCcEEEEECCC-Cc---eeEEeeccccCCCCCEEEEEecCCCEEEEEe---CCCcEEEEECCCCeE
Q psy6127 405 PDGKLILVSTN---GSIIRLFDAFN-GN---CVQSLSGVLNNNASPLEATFTPDSQFVASGS---TDGQVHIWNAERGYK 474 (515)
Q Consensus 405 p~~~~l~~~s~---dg~i~iwd~~~-~~---~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs---~dg~I~iwd~~~~~~ 474 (515)
|.|+.+++-+. ..++.+|.+++ .. .+..+.. ...+.+.|+|.|++++.+. ..|.+.++|..-..+
T Consensus 455 P~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk-----~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~ 529 (698)
T KOG2314|consen 455 PHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK-----KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADL 529 (698)
T ss_pred cCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-----cccceEEEcCCCcEEEEEEecccccceEEEecchhhh
Confidence 99998876553 35788888773 22 2222222 2267899999999988764 578899999875333
Q ss_pred EEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 475 VCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 475 ~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
...-...|. ..+.+.|.|.|+|+++++.
T Consensus 530 k~~~~~eh~-~at~veWDPtGRYvvT~ss 557 (698)
T KOG2314|consen 530 KDTASPEHF-AATEVEWDPTGRYVVTSSS 557 (698)
T ss_pred hhccCcccc-ccccceECCCCCEEEEeee
Confidence 333323253 4678999999999999873
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-09 Score=101.06 Aligned_cols=274 Identities=11% Similarity=0.135 Sum_probs=184.6
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCC--Ceee--eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDD---DQIIIYDCEQ--GTSK--NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~d---g~i~iwd~~~--~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
-.+.+.++-++|+|+++.|.++-.+ |.|..|.++. |+.. ........+...+++++++++++++. -..|.|.
T Consensus 36 v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~An-Y~~g~v~ 114 (346)
T COG2706 36 VAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVAN-YHSGSVS 114 (346)
T ss_pred ccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEE-ccCceEE
Confidence 3567788999999999999988654 7788777764 4332 22223334458899999999999887 4579999
Q ss_pred EEECCC-Ceee--EEecCCCCC----------eEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeEEE----EecCCCee
Q psy6127 291 YLSLHD-NKYV--RYFPGHVRK----------VSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNVGM----IQLSGNKP 352 (515)
Q Consensus 291 vwd~~~-~~~~--~~~~~h~~~----------v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~----~~~~~~~~ 352 (515)
++-++. |... .....|.+. +....+.|++++|++.+- --.|.+|++..+..... +......+
T Consensus 115 v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPR 194 (346)
T COG2706 115 VYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPR 194 (346)
T ss_pred EEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcc
Confidence 999865 3322 122235544 889999999999888764 24689999997764332 24455688
Q ss_pred EEEECCCCCEEEEEE-CCCcEEEEEeecC--CCCCceeeec---CCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECC
Q psy6127 353 IAAYDPEGLAFAIGV-NSDSIKLYDVRSY--DKGPFASFKC---PGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAF 425 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~-~dg~i~i~d~~~~--~~~~~~~~~~---~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~ 425 (515)
.+.|+|++++..+.. -+++|.+|..... +....+.... ..........|..+|||++|+++.. ...|.+|.+.
T Consensus 195 Hi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~ 274 (346)
T COG2706 195 HIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVD 274 (346)
T ss_pred eEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 999999999977765 4899999998874 1111111111 1123345568999999999988764 3468888775
Q ss_pred CC-ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-CcEEEEEC--CCCeEEEEEcCCCCCCeEEEEEC
Q psy6127 426 NG-NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-GQVHIWNA--ERGYKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 426 ~~-~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-g~I~iwd~--~~~~~~~~~~~~h~~~V~~l~~s 492 (515)
.. ..+........+....+...|+|+|++|+++..+ ..|.+|.+ ++|++-............|+.|.
T Consensus 275 ~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 275 PDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred CCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 43 3333333333334447899999999999998865 45888765 45655444332244445577664
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-10 Score=117.32 Aligned_cols=218 Identities=13% Similarity=0.152 Sum_probs=137.3
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE--E-EEEeCCC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCC
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS--F-ISGSYDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGL 361 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~--l-~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~ 361 (515)
..|.+.|.+.+... .+........+-+|+|||+. + ++...+| .|.+.++.+++........+......|+|||+
T Consensus 165 ~~l~~~d~dG~~~~-~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~ 243 (428)
T PRK01029 165 GELWSVDYDGQNLR-PLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKK 243 (428)
T ss_pred ceEEEEcCCCCCce-EcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCC
Confidence 46778887655443 34445566778899999975 3 2444443 57888998887766665566566789999999
Q ss_pred EEEEEEC-CC----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEE--ECCC-CceeEE
Q psy6127 362 AFAIGVN-SD----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLF--DAFN-GNCVQS 432 (515)
Q Consensus 362 ~l~~g~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iw--d~~~-~~~~~~ 432 (515)
.|+..+. +| .+..|++..+.......+. ..........+|+|||+.|+..+ .+|...+| ++.. +.....
T Consensus 244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt--~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~ 321 (428)
T PRK01029 244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLL--NEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRL 321 (428)
T ss_pred EEEEEECCCCCcceeEEEeecccCCCCcceEee--cCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEE
Confidence 9887653 23 3344666543211111121 11222334689999999888766 45654555 4432 222333
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCC---CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-----CC
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTD---GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-----SN 504 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-----~d 504 (515)
+.... ..+....|+|||+.|+..+.+ ..|++||+.+++...... ....+....|+|||+.|+... ..
T Consensus 322 lt~~~---~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~--~~~~~~~p~wSpDG~~L~f~~~~~g~~~ 396 (428)
T PRK01029 322 LTKKY---RNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT--SPENKESPSWAIDSLHLVYSAGNSNESE 396 (428)
T ss_pred eccCC---CCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC--CCCCccceEECCCCCEEEEEECCCCCce
Confidence 33222 235678999999988876543 369999999887654332 334577899999999887543 22
Q ss_pred EEEEcCCC
Q psy6127 505 MAFWIPTL 512 (515)
Q Consensus 505 v~iW~~~~ 512 (515)
+.+|+++.
T Consensus 397 L~~vdl~~ 404 (428)
T PRK01029 397 LYLISLIT 404 (428)
T ss_pred EEEEECCC
Confidence 66666654
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-11 Score=110.61 Aligned_cols=250 Identities=15% Similarity=0.202 Sum_probs=182.1
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE-QGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
.+++.++||.+.|++...-|...-+++.+.|.++|||--. .++.-..+ .....+++++.+.+....++++- ..|++
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~--~ngtv 92 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQ--DNGTV 92 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEE--ecceE
Confidence 4457789999999999999988889999999999999543 34433322 23357789999999887777665 68888
Q ss_pred EEEECC----CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEE
Q psy6127 290 RYLSLH----DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 290 ~vwd~~----~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 365 (515)
.-+.+. .....+.+..|...+..+-|+.....+++.+.|..+.---.+.+..+..+..........++-. +...
T Consensus 93 tefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~fv 170 (404)
T KOG1409|consen 93 TEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL--YAFV 170 (404)
T ss_pred EEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE--EEEe
Confidence 877653 3455667788999999999999889999999998876555666655544433322222222222 5556
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcee-EEeeccccCCCCCE
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV-QSLSGVLNNNASPL 444 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~i~ 444 (515)
|...|.+..-.+...... .+....+|...+++++|.|....+++|..|..+.+||+.-.+-. ..+.+|.. .+.
T Consensus 171 Gd~~gqvt~lr~~~~~~~---~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~---kV~ 244 (404)
T KOG1409|consen 171 GDHSGQITMLKLEQNGCQ---LITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHND---KVQ 244 (404)
T ss_pred cccccceEEEEEeecCCc---eEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchh---hhh
Confidence 667777777666543332 34445688899999999999999999999999999998654432 33444333 367
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 445 EATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
.+..-+--+.+.+++.||.|.+|+.+.
T Consensus 245 ~l~~~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 245 ALSYAQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred hhhhhhhheeeeeccCCCeEEEEeccc
Confidence 777777778899999999999999763
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-11 Score=121.66 Aligned_cols=274 Identities=12% Similarity=0.102 Sum_probs=197.1
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---------------eeeEecCCCCceeEEEEecCCCeEEEEEee
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT---------------SKNTINSKKYGVDLIKFTHSKTTAIHASTK 284 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~ 284 (515)
......|++|+....++|+|+.||.+++-.+.+.. .-+++.+|...|..+.|+...+.+-+. +
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtS--D 90 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTS--D 90 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccccccc--C
Confidence 34567899999999999999999999999876432 224578999999999999887766433 5
Q ss_pred CCCeEEEEECCCCeeeEEe--cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCE
Q psy6127 285 VDATLRYLSLHDNKYVRYF--PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~ 362 (515)
.+|-|.+|-+-.|.-...+ ....+.|.+++|+.||..+...-.||.|.+=.++..+....--.......+.|++|.+.
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~ 170 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQ 170 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecccHHH
Confidence 7999999998877654332 23557799999999999999999999988877665433222111112457899999999
Q ss_pred EEEEECCCcEEEEEeecCCCCC--cee-ee---cCCCCCcCeEEEEEc--------CCCCEEEEEECCCcEEEEECCCCc
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGP--FAS-FK---CPGERGCEWTGLKFS--------PDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~--~~~-~~---~~~~~~~~i~~l~~s--------p~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
+..+-.+|.+.+||.+..-... ..+ .. ........+..+.|. |+...++++...|.+.+..-.+..
T Consensus 171 ~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~ 250 (1189)
T KOG2041|consen 171 ALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDP 250 (1189)
T ss_pred HHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCC
Confidence 9999899999999976532110 001 11 011222235556663 577899999999999887655544
Q ss_pred eeEEeeccccCCCCCEEEEEecCCCEEEEEeCC---------CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEE
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTD---------GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLA 499 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d---------g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~la 499 (515)
....+.. ...+....|+++|..||.++.+ +.|.+|.. -|+.+.+++. ....|++++|-..|..+|
T Consensus 251 ~Pvv~dt----gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkv-pg~~It~lsWEg~gLriA 324 (1189)
T KOG2041|consen 251 EPVVVDT----GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKV-PGSCITGLSWEGTGLRIA 324 (1189)
T ss_pred CCeEEec----ccEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEec-CCceeeeeEEcCCceEEE
Confidence 3333332 2337889999999999998754 35777764 5788888877 678899999998887666
Q ss_pred Ee
Q psy6127 500 SA 501 (515)
Q Consensus 500 s~ 501 (515)
.+
T Consensus 325 ~A 326 (1189)
T KOG2041|consen 325 IA 326 (1189)
T ss_pred EE
Confidence 54
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.1e-11 Score=116.36 Aligned_cols=188 Identities=15% Similarity=0.183 Sum_probs=149.9
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCCeEEEEec----CCCeeEEEE------C--------------CCCCEEEEEECCCcE
Q psy6127 317 PVDDSFISGSYDKTVRVWDLRQPNNVGMIQL----SGNKPIAAY------D--------------PEGLAFAIGVNSDSI 372 (515)
Q Consensus 317 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~------s--------------~~~~~l~~g~~dg~i 372 (515)
|...++|....||.+++||...++....+.. .+...+..| + .+-..++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 4456899999999999999999887776632 222233332 2 234568889999999
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
.+|++..++. ........|.+.|.++.++.+-..|.+++.|+.+..|+...++.++.+...... +.+++.+|||
T Consensus 83 ~~ys~~~g~i---t~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~---~~sl~is~D~ 156 (541)
T KOG4547|consen 83 LLYSVAGGEI---TAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL---VSSLCISPDG 156 (541)
T ss_pred EEEEecCCeE---EEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc---cceEEEcCCC
Confidence 9999987652 122224688889999999999999999999999999999999988888775444 7899999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCC-----CCEEEEee---CCEEEEcCCCC
Q psy6127 453 QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK-----YHMLASAC---SNMAFWIPTLS 513 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~-----~~~las~~---~dv~iW~~~~~ 513 (515)
+.+++++ +.|++||+++++.+..|.+ |.++|.+++|..+ |.++.++. ..+.+|-.+..
T Consensus 157 ~~l~~as--~~ik~~~~~~kevv~~ftg-h~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 157 KILLTAS--RQIKVLDIETKEVVITFTG-HGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred CEEEecc--ceEEEEEccCceEEEEecC-CCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence 9999885 6899999999999999999 9999999999876 67776654 23888877653
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.2e-10 Score=106.81 Aligned_cols=322 Identities=14% Similarity=0.179 Sum_probs=210.0
Q ss_pred CCcchhhccccccccCCceeEEEEEEeecccccee--ee-----eeeCCC-CcEEEEccceeeeeEeeeeccccCCc--E
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAA--SL-----AHSRSS-RTITKCSENLVRSYRVAKVFRENTDK--I 224 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~l-----~~s~~~-~~~i~~wd~~~~~~~~~~~~~~h~~~--I 224 (515)
.+|....+..+..+..+...-+.+++.+.+..+-. .. -.++.. +..+.+|| ..++..+..+.+-..+ .
T Consensus 56 ~~~~g~~~~~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd--~~sg~iv~sf~~~~q~~~~ 133 (561)
T COG5354 56 ECWGGPSKAKLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWD--IASGMIVFSFNGISQPYLG 133 (561)
T ss_pred EEccccchhheeeeecCCceecccCcccceeeeeccCCccChhhccCCccccCceeEEe--ccCceeEeeccccCCcccc
Confidence 88999888888777766555566666665533210 00 001111 12478899 8899999999887776 6
Q ss_pred E-EEEEcCCCCEEEEEeCCCeEEEEECCCCee-eeEecC-CCCceeEEEEecCCCeEE--EEE---eeCCCeEEEEECCC
Q psy6127 225 N-SLDYSSDGSLLISCSDDDQIIIYDCEQGTS-KNTINS-KKYGVDLIKFTHSKTTAI--HAS---TKVDATLRYLSLHD 296 (515)
Q Consensus 225 ~-~l~~spd~~~lasgs~dg~i~iwd~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~--~~s---~~~d~~v~vwd~~~ 296 (515)
+ -+.|+-+.+++|--. ...+.|+++ ++.. ...+.. ....+....|+|.++.-. +.+ ....+.+++|.+..
T Consensus 134 Wp~~k~s~~D~y~ARvv-~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~ 211 (561)
T COG5354 134 WPVLKFSIDDKYVARVV-GSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPK 211 (561)
T ss_pred cceeeeeecchhhhhhc-cCeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccC
Confidence 6 788999888877553 356999996 3221 111111 135688888998755433 222 23578999999987
Q ss_pred CeeeEEecCCCCCeEEEEEcCCCCEEEEEe-----------CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEE
Q psy6127 297 NKYVRYFPGHVRKVSSLNLSPVDDSFISGS-----------YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 297 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s-----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 365 (515)
+..+.+-.-....=..+.|++.|+++..-- ....+.++++....+.......+++...+|.|.++.+++
T Consensus 212 ~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~v 291 (561)
T COG5354 212 NSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAV 291 (561)
T ss_pred CCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeE
Confidence 776655433333345688899888654321 135688888885555444466788999999999988776
Q ss_pred EE--CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCceeE-EeeccccC
Q psy6127 366 GV--NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG---SIIRLFDAFNGNCVQ-SLSGVLNN 439 (515)
Q Consensus 366 g~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d---g~i~iwd~~~~~~~~-~~~~~~~~ 439 (515)
.+ .+..+.++|++..- ....+.. .=..+.|+|.+++++.++-| |.+-+||........ .+.+..
T Consensus 292 i~g~~pa~~s~~~lr~Nl-----~~~~Pe~---~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n-- 361 (561)
T COG5354 292 ISGYMPASVSVFDLRGNL-----RFYFPEQ---KRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN-- 361 (561)
T ss_pred Eecccccceeecccccce-----EEecCCc---ccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCC--
Confidence 54 67889999998731 2222222 22368899999999998754 679999976654433 444321
Q ss_pred CCCCEEEEEecCCCEEEEEe------CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 440 NASPLEATFTPDSQFVASGS------TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 440 ~~~i~~~~~sp~g~~l~sgs------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
..-+.|+||++++.+.. .|..|.|||+.... .. ..+.+.|.|.+++..+.+
T Consensus 362 ---~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~-~f--------el~~~~W~p~~~~~ttsS 418 (561)
T COG5354 362 ---TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK-VF--------ELTNITWDPSGQYVTTSS 418 (561)
T ss_pred ---ceEeeccCCceEEEecCCCcccccCcceEEEEecCch-hh--------hhhhccccCCcccceeec
Confidence 46788999999988764 47789999986432 21 344566666655554443
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-10 Score=108.42 Aligned_cols=317 Identities=13% Similarity=0.184 Sum_probs=203.3
Q ss_pred CcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeee----CCCCcEEEEccceeeeeEeeeecccc--CCcE-
Q psy6127 152 NKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHS----RSSRTITKCSENLVRSYRVAKVFREN--TDKI- 224 (515)
Q Consensus 152 n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s----~~~~~~i~~wd~~~~~~~~~~~~~~h--~~~I- 224 (515)
..+.+|--++...++.+.++..--..++++++........-.+ ......+.+|| ++++...+.|..- ...+
T Consensus 231 ~GI~lWGG~~f~r~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWD--I~tG~lkrsF~~~~~~~~~W 308 (698)
T KOG2314|consen 231 QGIALWGGESFDRIQRFYHPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWD--IATGLLKRSFPVIKSPYLKW 308 (698)
T ss_pred cceeeecCccHHHHHhccCCCceeeecCCccceEEEecCCccccCcccCCCceEEEEE--ccccchhcceeccCCCcccc
Confidence 3347899888888888865544455566666654321111111 11234588999 9999888887662 2223
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC---CeEEEEECCCCeeeE
Q psy6127 225 NSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD---ATLRYLSLHDNKYVR 301 (515)
Q Consensus 225 ~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d---~~v~vwd~~~~~~~~ 301 (515)
.-+.||.|++|+|--.. ..|.||+..+-.++..-...-.+|....|+|.++.++.-+-..+ ..+.+..+.+++.++
T Consensus 309 P~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iR 387 (698)
T KOG2314|consen 309 PIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIR 387 (698)
T ss_pred ceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceee
Confidence 34689999999998776 46999998764444333334567889999999888877653222 357788888888877
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCC-eEEEEecCCCeeEEEECCCCCEEEEEEC--
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGS----------YDKTVRVWDLRQPN-NVGMIQLSGNKPIAAYDPEGLAFAIGVN-- 368 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s----------~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~-- 368 (515)
+-.-|.-.=..+.|..+|.+|+.-- .-..+.|+.++... ++........+-..+|.|.|+.+++-+.
T Consensus 388 t~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~ 467 (698)
T KOG2314|consen 388 TKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNT 467 (698)
T ss_pred eccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccc
Confidence 7665544444566777788776421 11235566666544 3455567777888999999999887653
Q ss_pred -CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE---CCCcEEEEECCCCceeEEeeccccCCCCCE
Q psy6127 369 -SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST---NGSIIRLFDAFNGNCVQSLSGVLNNNASPL 444 (515)
Q Consensus 369 -dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~ 444 (515)
..++.+|.+++....+....... ....+.+.|+|.|++++++. ..|.+.++|+....+...- +..|. ..+
T Consensus 468 ~k~tvsfY~~e~~~~~~~lVk~~d---k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~--~~eh~-~at 541 (698)
T KOG2314|consen 468 VKNTVSFYAVETNIKKPSLVKELD---KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTA--SPEHF-AAT 541 (698)
T ss_pred cccceeEEEeecCCCchhhhhhhc---ccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhcc--Ccccc-ccc
Confidence 45789999885332222111111 23456899999999998765 5788999998743322111 11121 257
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 445 EATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
.+.|.|.|+|+++++.-...+ ++.|-.+.++.|
T Consensus 542 ~veWDPtGRYvvT~ss~wrhk---~d~GYri~tfqG 574 (698)
T KOG2314|consen 542 EVEWDPTGRYVVTSSSSWRHK---VDNGYRIFTFQG 574 (698)
T ss_pred cceECCCCCEEEEeeehhhhc---cccceEEEEeec
Confidence 899999999999997544322 244444554443
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-09 Score=106.40 Aligned_cols=287 Identities=13% Similarity=0.118 Sum_probs=173.0
Q ss_pred CCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecC
Q psy6127 195 RSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 195 ~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 274 (515)
++.++.+..+| ..+++.+..+.-.......... ++..++.++.+|.+..+|..+|+.+........ +.+.... .
T Consensus 71 ~~~~g~v~a~d--~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~p~v-~ 144 (377)
T TIGR03300 71 ADADGTVVALD--AETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSE-VLSPPLV-A 144 (377)
T ss_pred ECCCCeEEEEE--ccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccCce-eecCCEE-E
Confidence 44455566666 4556655444333221112222 567788888999999999999998877654322 2211111 2
Q ss_pred CCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeE-----EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC
Q psy6127 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS-----SLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~-----~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 349 (515)
+..+++.+ .++.++.||.++|+.+..+......+. +.... +..++.+..++.+..+|.++|+.+.......
T Consensus 145 ~~~v~v~~--~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~ 220 (377)
T TIGR03300 145 NGLVVVRT--NDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVAL 220 (377)
T ss_pred CCEEEEEC--CCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeecccc
Confidence 34555543 589999999999998877654322111 11122 3467888889999999999998765543211
Q ss_pred Ce--------eEEEECC--CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcE
Q psy6127 350 NK--------PIAAYDP--EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSII 419 (515)
Q Consensus 350 ~~--------~~~~~s~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i 419 (515)
.. ..+.-+| .+..+++++.+|.+..||.++++. ..... .. ...... ..+..+++++.+|.+
T Consensus 221 ~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~----~W~~~--~~-~~~~p~--~~~~~vyv~~~~G~l 291 (377)
T TIGR03300 221 PKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRV----LWKRD--AS-SYQGPA--VDDNRLYVTDADGVV 291 (377)
T ss_pred CCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcE----EEeec--cC-CccCce--EeCCEEEEECCCCeE
Confidence 10 0000111 356778888899999999987652 11111 11 111222 246688888899999
Q ss_pred EEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCe-EEEEECCCCCEE
Q psy6127 420 RLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAV-QSLQFNPKYHML 498 (515)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V-~~l~~sp~~~~l 498 (515)
..+|..+|+.+.......... ...... .+..+++++.+|.++++|..+|+.+.++.. +...+ ...++..+ + |
T Consensus 292 ~~~d~~tG~~~W~~~~~~~~~--~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~-~~~~~~~sp~~~~~-~-l 364 (377)
T TIGR03300 292 VALDRRSGSELWKNDELKYRQ--LTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKT-DGSGIASPPVVVGD-G-L 364 (377)
T ss_pred EEEECCCCcEEEccccccCCc--cccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEc-CCCccccCCEEECC-E-E
Confidence 999999998765543211111 122222 367889999999999999999999998875 44333 23333333 3 4
Q ss_pred EEeeCCEEE
Q psy6127 499 ASACSNMAF 507 (515)
Q Consensus 499 as~~~dv~i 507 (515)
..++.+.+|
T Consensus 365 ~v~~~dG~l 373 (377)
T TIGR03300 365 LVQTRDGDL 373 (377)
T ss_pred EEEeCCceE
Confidence 444444443
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.3e-10 Score=107.12 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=149.5
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeeeEecCC---CCceeEEEEe------c------------CCCeEEEEEeeCCCe
Q psy6127 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK---KYGVDLIKFT------H------------SKTTAIHASTKVDAT 288 (515)
Q Consensus 230 spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~---~~~v~~~~~~------~------------~~~~l~~~s~~~d~~ 288 (515)
.|-..++|....||.+|+||..+++....+... ++...+..|. | .++..+++-|...|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 345679999999999999999998877666432 3445555553 1 122333333347999
Q ss_pred EEEEECCCCeeeEEec--CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEE
Q psy6127 289 LRYLSLHDNKYVRYFP--GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~ 365 (515)
|.+|++..++....+. .|.+.|.++.++.+-..|.+++.|+.+..|+......++..... ..+.+++++|||..+++
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~ 161 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT 161 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEe
Confidence 9999999999888775 69999999999999999999999999999999999988887443 44788999999999998
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-----CCEEEEEE-CCCcEEEEECCC
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-----GKLILVST-NGSIIRLFDAFN 426 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-----~~~l~~~s-~dg~i~iwd~~~ 426 (515)
++ +.|++||+++.+ .+....+|.++|+++.|-.+ |.+++++. .+..+.+|-+..
T Consensus 162 as--~~ik~~~~~~ke-----vv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 162 AS--RQIKVLDIETKE-----VVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred cc--ceEEEEEccCce-----EEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 74 689999999876 66777899999999999876 77777654 455677776544
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-08 Score=110.78 Aligned_cols=287 Identities=17% Similarity=0.260 Sum_probs=185.2
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEE----ECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIY----DCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iw----d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
...+.|.++.|-++...++.+..+|.|.+. +..+.. +...-.-..+|.+++|+||+..++++++ ++++.+.+-
T Consensus 73 ~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~--~~~l~~mt~ 149 (928)
T PF04762_consen 73 DPNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTG--EGNLLLMTR 149 (928)
T ss_pred CCCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeC--CCEEEEEec
Confidence 346789999999999999999999999999 544322 2222334578999999999999999984 777766532
Q ss_pred C---------------CCeee--------EEecC------------------------CCCCeEEEEEcCCCCEEEEEeC
Q psy6127 295 H---------------DNKYV--------RYFPG------------------------HVRKVSSLNLSPVDDSFISGSY 327 (515)
Q Consensus 295 ~---------------~~~~~--------~~~~~------------------------h~~~v~~l~~~~~~~~l~s~s~ 327 (515)
. ..+.+ ..|.| +.+.-..++|-.||.++|+.+.
T Consensus 150 ~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~ 229 (928)
T PF04762_consen 150 DFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSV 229 (928)
T ss_pred cceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEE
Confidence 1 00111 11111 2234567889999999998874
Q ss_pred ---C---CcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEEC---CCcEEEEEeecCCCCCceeeecC-CCCCc
Q psy6127 328 ---D---KTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVN---SDSIKLYDVRSYDKGPFASFKCP-GERGC 396 (515)
Q Consensus 328 ---d---g~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~---dg~i~i~d~~~~~~~~~~~~~~~-~~~~~ 396 (515)
. +.+++|+-+ |....+- ...+--..++|.|.|+++|+... ...|.+|.-+..+.. .+... .....
T Consensus 230 ~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhg---eF~l~~~~~~~ 305 (928)
T PF04762_consen 230 EPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHG---EFTLRFDPEEE 305 (928)
T ss_pred EcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEee---eEecCCCCCCc
Confidence 2 579999965 5433332 22333457999999999998764 345666665443322 22222 24456
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEEC----CC
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNA----ER 471 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~----~~ 471 (515)
.+..+.|++|+..|++...|. |.+|-..+........-.......+..+.|+|.. ..|...+.+|.+..++. ..
T Consensus 306 ~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~ 384 (928)
T PF04762_consen 306 KVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSR 384 (928)
T ss_pred eeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEe
Confidence 788999999999999977665 9999988876433333222233335559999964 45666666566655432 21
Q ss_pred C--------eEEEEEcC----------------------CCCCCeEEEEECCCCCEEE--EeeCCEEEEcCCCC
Q psy6127 472 G--------YKVCVLDG----------------------DHPSAVQSLQFNPKYHMLA--SACSNMAFWIPTLS 513 (515)
Q Consensus 472 ~--------~~~~~~~~----------------------~h~~~V~~l~~sp~~~~la--s~~~dv~iW~~~~~ 513 (515)
+ -.+..+.| .-..+|.+++|++++..+| +.++.+.+|.++..
T Consensus 385 s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~ 458 (928)
T PF04762_consen 385 SPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLK 458 (928)
T ss_pred cCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCC
Confidence 1 11222211 1357899999999885444 44566888886543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-10 Score=120.50 Aligned_cols=199 Identities=15% Similarity=0.137 Sum_probs=155.0
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCc--eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG--VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~ 298 (515)
.+.|....+.-+.+.++.+..++.+.+||...+.....+...+.. ..++-+--....+.+++|+--+.|.+|+.....
T Consensus 87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn 166 (967)
T KOG0974|consen 87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN 166 (967)
T ss_pred cccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccC
Confidence 344444566667888999999999999999877766666544322 122333334455666676789999999987544
Q ss_pred eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE--EEecCCCeeEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 299 YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG--MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 299 ~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
....+.+|.+.|.++.++.||.++++.|.|.++++|++++.+... .+.|...+..+++.|+ .+++++.|-+.++|+
T Consensus 167 ~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~ 244 (967)
T KOG0974|consen 167 KPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWG 244 (967)
T ss_pred CcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEe
Confidence 444688999999999999999999999999999999999988765 4567777889999998 999999999999997
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~ 426 (515)
....... ....+....+..++..++....++++.|+.+++|+...
T Consensus 245 ~~~~~l~-----~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 245 VNGTQLE-----VYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred cccceeh-----hhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 6653211 23345566788999999999999999999999999653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-09 Score=96.07 Aligned_cols=236 Identities=14% Similarity=0.071 Sum_probs=158.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeee-eEecCCCCceeEEEEecCCCe-EEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSK-NTINSKKYGVDLIKFTHSKTT-AIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV 310 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~-l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v 310 (515)
..+||.|+.-|...+|...+.+.. .....+...|+-+.-.-+... +..+ +.|.++++.+++.+..........-.+
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~--sndht~k~~~~~~~s~~~~~h~~~~~~ 161 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIA--SNDHTGKTMVVSGDSNKFAVHNQNLTQ 161 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeec--cCCcceeEEEEecCcccceeeccccce
Confidence 358999999999999999865443 333444444443332223222 3334 368888888876554332221111238
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCC-CeEEE-E--ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce
Q psy6127 311 SSLNLSPVDDSFISGSYDKTVRVWDLRQP-NNVGM-I--QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~-~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 386 (515)
.++++++|++++++.+....|..|.+... +.+.. . ......-+.+|+.....+|+++.||++.|||++........
T Consensus 162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~ 241 (344)
T KOG4532|consen 162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAE 241 (344)
T ss_pred eeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhh
Confidence 89999999999999999999999988653 22222 2 33445678899999999999999999999999986544333
Q ss_pred eeecCCCCCcCeEEEEEcCCCC--EEEEEECCCcEEEEECCCCceeEEeeccccC-----CCCCEEEEEecCCCEEEEEe
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGK--LILVSTNGSIIRLFDAFNGNCVQSLSGVLNN-----NASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~--~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~i~~~~~sp~g~~l~sgs 459 (515)
.......|.+.++.+.|+|.|. +|+..-.-+.+.+.|+++++..+.+...... ...+....|+.++.-+.+.+
T Consensus 242 ~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~ 321 (344)
T KOG4532|consen 242 ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKN 321 (344)
T ss_pred hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCccccccc
Confidence 3344557899999999998664 4555555678999999998765554432211 12266677777776666665
Q ss_pred CCCcEEEEECCC
Q psy6127 460 TDGQVHIWNAER 471 (515)
Q Consensus 460 ~dg~I~iwd~~~ 471 (515)
++. +.=|++.+
T Consensus 322 e~~-~ae~ni~s 332 (344)
T KOG4532|consen 322 ELQ-GAEYNILS 332 (344)
T ss_pred chh-hheeeccc
Confidence 443 44566544
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.5e-09 Score=114.97 Aligned_cols=247 Identities=13% Similarity=0.169 Sum_probs=164.1
Q ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEECCCCeeeeEecC-C-------------CCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 225 NSLDYSSD-GSLLISCSDDDQIIIYDCEQGTSKNTINS-K-------------KYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 225 ~~l~~spd-~~~lasgs~dg~i~iwd~~~~~~~~~~~~-~-------------~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
..++++++ ++.+++-+.++.|++||.. ++.+..+.+ . -.....+++.++++.++++. ...+.|
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaD-t~n~~I 648 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVAD-TENHAL 648 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEe-CCCceE
Confidence 46788874 5677777778999999976 444444332 1 12357899999888777765 356889
Q ss_pred EEEECCCCeeeEEecCC-----------------CCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCeEEEEe-----
Q psy6127 290 RYLSLHDNKYVRYFPGH-----------------VRKVSSLNLSPV-DDSFISGSYDKTVRVWDLRQPNNVGMIQ----- 346 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h-----------------~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~----- 346 (515)
+++|..++.. .++.+- -.....++++|+ +..+++.+.++.|++||..++.......
T Consensus 649 r~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~ 727 (1057)
T PLN02919 649 REIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYER 727 (1057)
T ss_pred EEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccc
Confidence 9999877653 333110 123468999994 5566777788999999998765432110
Q ss_pred ----------cCCCeeEEEECCCCCEE-EEEECCCcEEEEEeecCCCCCce--------eeecCCC--------CCcCeE
Q psy6127 347 ----------LSGNKPIAAYDPEGLAF-AIGVNSDSIKLYDVRSYDKGPFA--------SFKCPGE--------RGCEWT 399 (515)
Q Consensus 347 ----------~~~~~~~~~~s~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~--------~~~~~~~--------~~~~i~ 399 (515)
.-.....++++|+++.+ ++-+.++.|++||+.++...... ....... ......
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~ 807 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL 807 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence 01124568999999854 45556789999998764311000 0000000 011235
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc----------ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV----------LNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
+++++|+|+.+++-+.++.|++||..++......... ...-..+..++++++|+++++-+.++.|++||+
T Consensus 808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~ 887 (1057)
T PLN02919 808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDL 887 (1057)
T ss_pred eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 8999999998888888999999999877654332110 001124688999999998888889999999999
Q ss_pred CCCeE
Q psy6127 470 ERGYK 474 (515)
Q Consensus 470 ~~~~~ 474 (515)
.+++.
T Consensus 888 ~~~~~ 892 (1057)
T PLN02919 888 NKGEA 892 (1057)
T ss_pred CCCcc
Confidence 88764
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.3e-10 Score=112.26 Aligned_cols=361 Identities=12% Similarity=0.087 Sum_probs=234.1
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccc-eeeeeeeCCCCcEEEEccceeeee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTM-AASLAHSRSSRTITKCSENLVRSY 211 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~l~~s~~~~~~i~~wd~~~~~~ 211 (515)
-+||.+|..|.| .+||...+-.+..++.|...+..+.+.+....- ..-++.. +...+.+|+ ..++
T Consensus 80 lliAsaD~~GrI----------il~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh--~ss~lvLwn--tdtG 145 (1062)
T KOG1912|consen 80 LLIASADISGRI----------ILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIH--GSSTLVLWN--TDTG 145 (1062)
T ss_pred eeEEeccccCcE----------EEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEec--CCcEEEEEE--ccCC
Confidence 479999999999 999999999998888887666666665444332 2223333 345577886 5566
Q ss_pred EeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-------CeeeeEecCCCC----------------c--
Q psy6127 212 RVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQ-------GTSKNTINSKKY----------------G-- 265 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~-------~~~~~~~~~~~~----------------~-- 265 (515)
+.............|+.+.| |.+.+..-+..|.+.+-+.-. ++....-..|.. .
T Consensus 146 ~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~ 225 (1062)
T KOG1912|consen 146 EKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPA 225 (1062)
T ss_pred ceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCc
Confidence 66666666667778899999 666666666677777665421 222222112111 0
Q ss_pred -------eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEEc
Q psy6127 266 -------VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD--SFISGSYDKTVRVWDL 336 (515)
Q Consensus 266 -------v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~s~dg~i~iwd~ 336 (515)
....+|+|.-+.+++++ ....+.++|++-..++....-..+.+.-+.+-|+++ .|++.-.||.+.+|-.
T Consensus 226 sa~fity~a~faf~p~~rn~lfi~--~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvr 303 (1062)
T KOG1912|consen 226 SAYFITYCAQFAFSPHWRNILFIT--FPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVR 303 (1062)
T ss_pred chhHHHHHHhhhcChhhhceEEEE--eccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEe
Confidence 12356788877777776 689999999998888888776777777888888765 7999999999999976
Q ss_pred CCCCeEEE-----E--ecCCCeeE-----------EEECCC-CCEEEEEECCCcEEEEEeecCCCCCc------------
Q psy6127 337 RQPNNVGM-----I--QLSGNKPI-----------AAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPF------------ 385 (515)
Q Consensus 337 ~~~~~~~~-----~--~~~~~~~~-----------~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~------------ 385 (515)
+....... + .....+.+ ....|. ...++.--.+|...+|.+++++....
T Consensus 304 k~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf 383 (1062)
T KOG1912|consen 304 KEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPF 383 (1062)
T ss_pred eccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccc
Confidence 54211111 1 11111111 222232 33444444677777887774331110
Q ss_pred --------------eeeecCCCCCcCeEEEEEcC-----------CC-------CEEEEEECCCcEEEEECCCCceeEEe
Q psy6127 386 --------------ASFKCPGERGCEWTGLKFSP-----------DG-------KLILVSTNGSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 386 --------------~~~~~~~~~~~~i~~l~~sp-----------~~-------~~l~~~s~dg~i~iwd~~~~~~~~~~ 433 (515)
..+...+.|....++....| .+ ..++.|+..|+|.++|+.++..-+.+
T Consensus 384 ~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~f 463 (1062)
T KOG1912|consen 384 DFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASF 463 (1062)
T ss_pred cccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhh
Confidence 01111223333333333322 22 25778999999999999999887777
Q ss_pred eccccCCCCCEEEEEecCCCEEEE---------EeCCCcEEEEECCCCeEE--EEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 434 SGVLNNNASPLEATFTPDSQFVAS---------GSTDGQVHIWNAERGYKV--CVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 434 ~~~~~~~~~i~~~~~sp~g~~l~s---------gs~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
..|... |.++.|-....++-. |+.-+.+.+-|+++|... +.+++....+|+.+..+.-++|++..=
T Consensus 464 svht~~---VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~F 540 (1062)
T KOG1912|consen 464 SVHTSL---VKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILF 540 (1062)
T ss_pred cccccc---eeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEe
Confidence 776554 788888765554432 233356788899998543 334555678999999999999999886
Q ss_pred CC--EEEEcCCC
Q psy6127 503 SN--MAFWIPTL 512 (515)
Q Consensus 503 ~d--v~iW~~~~ 512 (515)
.+ +.+|+++.
T Consensus 541 r~~plEiwd~kt 552 (1062)
T KOG1912|consen 541 RREPLEIWDLKT 552 (1062)
T ss_pred cccchHHHhhcc
Confidence 55 88998843
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.6e-09 Score=102.65 Aligned_cols=228 Identities=12% Similarity=0.029 Sum_probs=140.0
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCe-EEEEEee-CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTT-AIHASTK-VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD 320 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~s~~-~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 320 (515)
..|.+-|.. |...+.+.... ......|+|+++. +++.+-. .+..|+++|+.+++...... ..+......|+|||+
T Consensus 169 ~~l~~~d~d-g~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~ 245 (419)
T PRK04043 169 SNIVLADYT-LTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGS 245 (419)
T ss_pred ceEEEECCC-CCceeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCC
Confidence 345555554 33333343333 6778999999986 5544432 25679999998887655443 455667788999998
Q ss_pred EEEEE-eCC--CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CC--cEEEEEeecCCCCCceeeecCCCC
Q psy6127 321 SFISG-SYD--KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SD--SIKLYDVRSYDKGPFASFKCPGER 394 (515)
Q Consensus 321 ~l~s~-s~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~ 394 (515)
.++.. +.+ ..|.++|+.+++...............|+|||+.++..+. .+ .|.++|+.+++.. .+.. ...
T Consensus 246 ~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~---rlt~-~g~ 321 (419)
T PRK04043 246 KLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE---QVVF-HGK 321 (419)
T ss_pred EEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE---eCcc-CCC
Confidence 66543 333 4688889888875544333333445689999998888764 33 5666676654321 1111 111
Q ss_pred CcCeEEEEEcCCCCEEEEEECC---------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-C--
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNG---------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-G-- 462 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-g-- 462 (515)
. ...|+|||++++..+.. ..|.+.|+.++.. +.+.... . .....|+|||+.++..+.+ +
T Consensus 322 --~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~-~---~~~p~~SPDG~~I~f~~~~~~~~ 392 (419)
T PRK04043 322 --N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANG-V---NQFPRFSSDGGSIMFIKYLGNQS 392 (419)
T ss_pred --c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCC-C---cCCeEECCCCCEEEEEEccCCcE
Confidence 1 24899999998877643 3688889888764 3333221 1 2358899999988766543 2
Q ss_pred cEEEEECCCCeEEEEEcCCCCCCeEE
Q psy6127 463 QVHIWNAERGYKVCVLDGDHPSAVQS 488 (515)
Q Consensus 463 ~I~iwd~~~~~~~~~~~~~h~~~V~~ 488 (515)
.+.+.++.. .....+.. ..+.+..
T Consensus 393 ~L~~~~l~g-~~~~~l~~-~~g~~~~ 416 (419)
T PRK04043 393 ALGIIRLNY-NKSFLFPL-KVGKIQS 416 (419)
T ss_pred EEEEEecCC-CeeEEeec-CCCccCC
Confidence 366777754 33333433 3344443
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-08 Score=96.24 Aligned_cols=285 Identities=13% Similarity=0.114 Sum_probs=181.0
Q ss_pred CCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeeeeEecCCCC--ceeEEEE
Q psy6127 195 RSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE-QGTSKNTINSKKY--GVDLIKF 271 (515)
Q Consensus 195 ~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~-~~~~~~~~~~~~~--~v~~~~~ 271 (515)
++.++.+++....-++++-.-.+.+|-..-. .-.+ +.-.....||.=.+|.+. .|+-+ +.|+. .-.+-..
T Consensus 202 GGtrGklWis~d~g~tFeK~vdl~~~vS~Pm---IV~~-RvYFlsD~eG~GnlYSvdldGkDl---rrHTnFtdYY~R~~ 274 (668)
T COG4946 202 GGTRGKLWISSDGGKTFEKFVDLDGNVSSPM---IVGE-RVYFLSDHEGVGNLYSVDLDGKDL---RRHTNFTDYYPRNA 274 (668)
T ss_pred CCccceEEEEecCCcceeeeeecCCCcCCce---EEcc-eEEEEecccCccceEEeccCCchh---hhcCCchhcccccc
Confidence 3444445544333344555555666633222 1112 222223344444444433 23322 22321 1223334
Q ss_pred ecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC------CC-----CCeEEEE-EcC-CCCEEEEEeCCCcEEEEEcCC
Q psy6127 272 THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG------HV-----RKVSSLN-LSP-VDDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 272 ~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~------h~-----~~v~~l~-~~~-~~~~l~s~s~dg~i~iwd~~~ 338 (515)
+.||+.+++. ..|.|+++|..+.+....-.+ .. .+..-+. |++ +|.+++..|. |...+.+...
T Consensus 275 nsDGkrIvFq---~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~ 350 (668)
T COG4946 275 NSDGKRIVFQ---NAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWD 350 (668)
T ss_pred CCCCcEEEEe---cCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCC
Confidence 6788888775 478999999887654322111 00 1111111 222 4778888876 7777777666
Q ss_pred CCeEEEEecCCCeeEEEECCCCCEEEEEECCC-cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC
Q psy6127 339 PNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD-SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS 417 (515)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg 417 (515)
+-.++. ...+.+.-..+..+++-++.|..|| .+-+||.++++ .+.....-+.|.++..+|+|++++++....
T Consensus 351 ~~~iqv-~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e------~kr~e~~lg~I~av~vs~dGK~~vvaNdr~ 423 (668)
T COG4946 351 GYSIQV-GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE------VKRIEKDLGNIEAVKVSPDGKKVVVANDRF 423 (668)
T ss_pred CeeEEc-CCCCceEEEEEccCCcceEEeccCCceEEEEecCCce------EEEeeCCccceEEEEEcCCCcEEEEEcCce
Confidence 554443 3444477777888888899999999 89999998854 233344556788999999999999999999
Q ss_pred cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC----cEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 418 IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG----QVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 418 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg----~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
.+.+.|+.+|+....-+. ...-|+..+|+|+++++|-+--+| .|+++|+..++...... ..+.=.+-+|.|
T Consensus 424 el~vididngnv~~idkS---~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT--~ta~DfsPaFD~ 498 (668)
T COG4946 424 ELWVIDIDNGNVRLIDKS---EYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT--PTAYDFSPAFDP 498 (668)
T ss_pred EEEEEEecCCCeeEeccc---ccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC--CcccccCcccCC
Confidence 999999999986544333 334489999999999999887766 58999999888776554 334445788999
Q ss_pred CCCEEEEee
Q psy6127 494 KYHMLASAC 502 (515)
Q Consensus 494 ~~~~las~~ 502 (515)
|+++|.--+
T Consensus 499 d~ryLYfLs 507 (668)
T COG4946 499 DGRYLYFLS 507 (668)
T ss_pred CCcEEEEEe
Confidence 999887654
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=5e-10 Score=101.90 Aligned_cols=210 Identities=14% Similarity=0.185 Sum_probs=141.9
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeee-eccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAK-VFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~-~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
.+..++|+...+.+....+..+.. ++.+.|..+++|-+. ..++.-. ....-..+++++.+.++...|+.|-..
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~gv-----~~~s~drtvrv~lkr-ds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~n 89 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEEGV-----ISVSEDRTVRVWLKR-DSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDN 89 (404)
T ss_pred hhhhhcCchhhhhhheeccCCCCe-----EEccccceeeeEEec-cccccCchhhhhCCCCceEeeeeccceEEEEEEec
Confidence 455667775555554444444332 477888899998521 1111111 122335789999999999999999999
Q ss_pred CeEEEEECC----CCeeeeEecCCCCceeEEEEecCCCeEEEEEe-----------------------------------
Q psy6127 243 DQIIIYDCE----QGTSKNTINSKKYGVDLIKFTHSKTTAIHAST----------------------------------- 283 (515)
Q Consensus 243 g~i~iwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~----------------------------------- 283 (515)
|++.-+.+. .....+....|...+..+-|+-....+++.+-
T Consensus 90 gtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~f 169 (404)
T KOG1409|consen 90 GTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAF 169 (404)
T ss_pred ceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEE
Confidence 999888654 23444555667777777766655444443320
Q ss_pred --eCCCeEEEEE--CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE--EEecCCCeeEEEEC
Q psy6127 284 --KVDATLRYLS--LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG--MIQLSGNKPIAAYD 357 (515)
Q Consensus 284 --~~d~~v~vwd--~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~s 357 (515)
...|.|..-. ...-..+.++.+|.+.+.+++|.|....+++|..|..+.+||+..++-.. ...+.+.+..+...
T Consensus 170 vGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~ 249 (404)
T KOG1409|consen 170 VGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA 249 (404)
T ss_pred ecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence 1111111111 12223466788999999999999999999999999999999997655443 33556668888888
Q ss_pred CCCCEEEEEECCCcEEEEEeec
Q psy6127 358 PEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 358 ~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
+--+.+.+++.||.|.+|+++.
T Consensus 250 ~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 250 QHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred hhheeeeeccCCCeEEEEeccc
Confidence 8888899999999999999764
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.8e-08 Score=105.06 Aligned_cols=326 Identities=12% Similarity=0.107 Sum_probs=201.1
Q ss_pred eeEEEEEEeeccccceeeeeeeCCCCcEEEEc--cceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy6127 173 FVSLFVTFVSRVLTMAASLAHSRSSRTITKCS--ENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDC 250 (515)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~w--d~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~ 250 (515)
..++++.+....... .....+++.+..-. +......+++.. -...|.+++||||+..||....++++.+.+.
T Consensus 76 ~~ivs~~yl~d~~~l---~~~~~~Gdi~~~~~~~~~~~~~~E~VG~---vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~ 149 (928)
T PF04762_consen 76 DKIVSFQYLADSESL---CIALASGDIILVREDPDPDEDEIEIVGS---VDSGILAASWSPDEELLALVTGEGNLLLMTR 149 (928)
T ss_pred CcEEEEEeccCCCcE---EEEECCceEEEEEccCCCCCceeEEEEE---EcCcEEEEEECCCcCEEEEEeCCCEEEEEec
Confidence 347777777666544 22344555443311 211223333333 3568999999999999999999998887642
Q ss_pred CCCee------------------------eeEecC------------------------CCCceeEEEEecCCCeEEEEE
Q psy6127 251 EQGTS------------------------KNTINS------------------------KKYGVDLIKFTHSKTTAIHAS 282 (515)
Q Consensus 251 ~~~~~------------------------~~~~~~------------------------~~~~v~~~~~~~~~~~l~~~s 282 (515)
. .+. ...|+| ....-..++|-.||.++++.+
T Consensus 150 ~-fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss 228 (928)
T PF04762_consen 150 D-FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSS 228 (928)
T ss_pred c-ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEE
Confidence 1 111 111111 222455788999999988776
Q ss_pred e--eC--CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCCeEEEEec-----CCC
Q psy6127 283 T--KV--DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY---DKTVRVWDLRQPNNVGMIQL-----SGN 350 (515)
Q Consensus 283 ~--~~--d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~-----~~~ 350 (515)
. .. -..++||+-+ |....+...-.+--.+++|.|.|++||+.-. ...|.+|. ++|-.-..+.. ...
T Consensus 229 ~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~ 306 (928)
T PF04762_consen 229 VEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEK 306 (928)
T ss_pred EEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCce
Confidence 4 11 3679999954 6665555544444567899999999998865 34567776 34443333422 345
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEEC----C
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDA----F 425 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~----~ 425 (515)
+..+.|++++..||....|. |.+|-..+......+.+..... ..+..+.|+|. ...|...+.+|.+..++. .
T Consensus 307 v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~--~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~ 383 (928)
T PF04762_consen 307 VIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSS--ESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVS 383 (928)
T ss_pred eeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCC--CCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEE
Confidence 78899999999999987555 9999998876554445543322 22335999995 445666666666654442 1
Q ss_pred CCc--------eeEEeec--------------------cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE--
Q psy6127 426 NGN--------CVQSLSG--------------------VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV-- 475 (515)
Q Consensus 426 ~~~--------~~~~~~~--------------------~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~-- 475 (515)
.+. .+..+.+ .-....+|.+++|++++..+++-..||.+.+|........
T Consensus 384 ~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~ 463 (928)
T PF04762_consen 384 RSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSV 463 (928)
T ss_pred ecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccc
Confidence 110 1111111 0012346899999999988999999999999985433211
Q ss_pred ------EEEcC---------CCCCCeEEEEECCCCCEEEEeeC-----CEEEEcC
Q psy6127 476 ------CVLDG---------DHPSAVQSLQFNPKYHMLASACS-----NMAFWIP 510 (515)
Q Consensus 476 ------~~~~~---------~h~~~V~~l~~sp~~~~las~~~-----dv~iW~~ 510 (515)
..+.. .....+..++|..+..+++..+. .+.++++
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 518 (928)
T PF04762_consen 464 KPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDI 518 (928)
T ss_pred cCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEe
Confidence 11110 02345788899888776665543 2666665
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.7e-11 Score=114.03 Aligned_cols=273 Identities=12% Similarity=0.163 Sum_probs=181.6
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ-------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
..+.||+..|..++--.+.+-+++++.|++|++|.++. ..+..++..|+.+|..+.|..+..+++. -|+
T Consensus 729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S----cD~ 804 (1034)
T KOG4190|consen 729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS----CDG 804 (1034)
T ss_pred ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee----ccC
Confidence 46889999999998777788899999999999999863 2366788899999999999988776553 399
Q ss_pred eEEEEECCCCeeeEEec--CCCCCeEEEEEcCC--CCEEEEE-eCCCcEEEEEcCCCCeEEEEecC------CCeeEEEE
Q psy6127 288 TLRYLSLHDNKYVRYFP--GHVRKVSSLNLSPV--DDSFISG-SYDKTVRVWDLRQPNNVGMIQLS------GNKPIAAY 356 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~--~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~ 356 (515)
.+.+||.--++.+.... ...+.+..+..-|+ ...++.| +...+|+++|.+..+....+... .-++++++
T Consensus 805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaV 884 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAV 884 (1034)
T ss_pred cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEe
Confidence 99999987777665332 12233344444443 3344444 67899999999999877766332 33678999
Q ss_pred CCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEE-EECCCCceeEEeec
Q psy6127 357 DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRL-FDAFNGNCVQSLSG 435 (515)
Q Consensus 357 s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~i-wd~~~~~~~~~~~~ 435 (515)
.+.|++++++-.+|.|.+.|.+++. .+.....-.+....++ .|..+.++....|.++.+ |-..+|........
T Consensus 885 a~~GN~lAa~LSnGci~~LDaR~G~-----vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh~q~kp 958 (1034)
T KOG4190|consen 885 ADKGNKLAAALSNGCIAILDARNGK-----VINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQDKP 958 (1034)
T ss_pred ccCcchhhHHhcCCcEEEEecCCCc-----eeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeeccCC
Confidence 9999999999999999999999875 2222222222222222 245567777778888888 87766654443332
Q ss_pred cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC----CeEEEEEcC-CCCCCeEEEEECCCCCEEEEee
Q psy6127 436 VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER----GYKVCVLDG-DHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 436 ~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~----~~~~~~~~~-~h~~~V~~l~~sp~~~~las~~ 502 (515)
...... -.-.-|.-|+++...+.+.+|.-.. ...+..++. ...+..++++.-|-+.-+..|.
T Consensus 959 ppepah-----flqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGn 1025 (1034)
T KOG4190|consen 959 PPEPAH-----FLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGN 1025 (1034)
T ss_pred CCcchh-----hhhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccC
Confidence 221110 0112366677777777788875211 111112221 2456788888888555444444
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.6e-09 Score=108.28 Aligned_cols=246 Identities=15% Similarity=0.180 Sum_probs=181.4
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCC----------CeEEEEEeeCCCeEE
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK----------TTAIHASTKVDATLR 290 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~s~~~d~~v~ 290 (515)
...-.++.|+|.| ++|.|+. ..|.+-|..+-+.+..+..|...|+.+.|.|.. ..+++++++..|.|.
T Consensus 15 ~sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi 92 (1062)
T KOG1912|consen 15 RSNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII 92 (1062)
T ss_pred cccccccccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence 3346788999987 7787775 578999999999999999999999999998632 356778878899999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCC---C-CEEEEEeCCCcEEEEEcCCCCeEEEEecCCCe-eEEEECC-CCCEEE
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPV---D-DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK-PIAAYDP-EGLAFA 364 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~---~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~s~-~~~~l~ 364 (515)
+||...+..+..+..|.+++..++|-|. . ..|+.-....++.+|+..+|+..........+ .++.++| |.+.+.
T Consensus 93 l~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~ 172 (1062)
T KOG1912|consen 93 LVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFC 172 (1062)
T ss_pred EEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEE
Confidence 9999999999999999999999999773 3 35666677789999999999988887655544 4588888 566676
Q ss_pred EEECCCcEEEEEeecCC--CCCceeeecCCCCCc-------------------------CeEEEEEcCCCCEEEEEECCC
Q psy6127 365 IGVNSDSIKLYDVRSYD--KGPFASFKCPGERGC-------------------------EWTGLKFSPDGKLILVSTNGS 417 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~-------------------------~i~~l~~sp~~~~l~~~s~dg 417 (515)
.-+..|.+-+-+.-... ..+.+.+.....|.. ....++|+|.-+.++......
T Consensus 173 ~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~pr 252 (1062)
T KOG1912|consen 173 VLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPR 252 (1062)
T ss_pred EEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEecc
Confidence 66667766665543211 111122222111111 012467888777666667778
Q ss_pred cEEEEECCCCceeEEeeccccCCCCCEEEEEecCC--CEEEEEeCCCcEEEEECCC
Q psy6127 418 IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS--QFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 418 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g--~~l~sgs~dg~I~iwd~~~ 471 (515)
.+.++|++-..++....-..+. +.-+.+-|++ ..|+++-.||.+.+|-.+.
T Consensus 253 ellv~dle~~~~l~vvpier~~---akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 253 ELLVFDLEYECCLAVVPIERGG---AKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred ceEEEcchhhceeEEEEeccCC---cceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 8999999988888777654433 5566777765 5899999999999997654
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.5e-08 Score=101.03 Aligned_cols=265 Identities=11% Similarity=0.045 Sum_probs=160.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS 311 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~ 311 (515)
.+..+++++.+|.+..+|..+|+.+.............. .++..+++++ .++.+..+|..+|+.+....... .+.
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~--~~g~l~ald~~tG~~~W~~~~~~-~~~ 138 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGT--EKGEVIALDAEDGKELWRAKLSS-EVL 138 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEc--CCCEEEEEECCCCcEeeeeccCc-eee
Confidence 356888888999999999999999877665443222222 2455666554 68999999999999887654322 222
Q ss_pred E-EEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEE--ECC--CCCEEEEEECCCcEEEEEeecCCCCCce
Q psy6127 312 S-LNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAA--YDP--EGLAFAIGVNSDSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 312 ~-l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~s~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 386 (515)
+ ... .+..++.++.++.+..||.++++.+............. -+| .+..++.+..+|.+..+|.++++..-..
T Consensus 139 ~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~ 216 (377)
T TIGR03300 139 SPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQ 216 (377)
T ss_pred cCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeee
Confidence 2 122 24567778889999999999999877765443211110 011 2346778888899999998876522111
Q ss_pred eeecCCCCC--cCeEEEEEcC--CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 387 SFKCPGERG--CEWTGLKFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 387 ~~~~~~~~~--~~i~~l~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
......... .....+.-+| .+..+++++.+|.++.||..+|+.+...... . ..... .++..++.++.||
T Consensus 217 ~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~---~~~p~--~~~~~vyv~~~~G 289 (377)
T TIGR03300 217 RVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS--S---YQGPA--VDDNRLYVTDADG 289 (377)
T ss_pred ccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC--C---ccCce--EeCCEEEEECCCC
Confidence 111000000 0000011111 3557888889999999999999876655421 1 11222 2467788888999
Q ss_pred cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC--CEEEEcCCC
Q psy6127 463 QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS--NMAFWIPTL 512 (515)
Q Consensus 463 ~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--dv~iW~~~~ 512 (515)
.++.+|..+|+.+................ .+..++.++. .+.+++.+.
T Consensus 290 ~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~t 339 (377)
T TIGR03300 290 VVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSRED 339 (377)
T ss_pred eEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCC
Confidence 99999999998876653211111222222 2345555543 355565543
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.5e-09 Score=95.46 Aligned_cols=244 Identities=15% Similarity=0.185 Sum_probs=154.7
Q ss_pred CcEEEEEEcC---CCC-EEEEEeCCCeEEEEECCCCeeeeEecCCC------CceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 222 DKINSLDYSS---DGS-LLISCSDDDQIIIYDCEQGTSKNTINSKK------YGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 222 ~~I~~l~~sp---d~~-~lasgs~dg~i~iwd~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
..+..+.|.. +|. .++-+-.+|.|.++..........+++-. ....++.|++.+..+++. ..+|.+.+
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs--~s~G~~~~ 147 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVS--DSRGSISG 147 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEE--cCCCcEEE
Confidence 4455566653 444 46667778999999876554444444322 134578899988886554 35888886
Q ss_pred EECCCCee--eEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCC-CeEEE--EecCCCeeEEEECC-CCCEEE
Q psy6127 292 LSLHDNKY--VRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQP-NNVGM--IQLSGNKPIAAYDP-EGLAFA 364 (515)
Q Consensus 292 wd~~~~~~--~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~-~~~~~--~~~~~~~~~~~~s~-~~~~l~ 364 (515)
-+...... ++..+.|.-+.+...|+... +.+++|+.|+.+..||++.. +.+.. ..+...+.++.-+| .+.+++
T Consensus 148 v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~ 227 (339)
T KOG0280|consen 148 VYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIA 227 (339)
T ss_pred EecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEE
Confidence 66554443 34788999999999998654 48899999999999999943 33322 23444566666555 688999
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcee--EEeeccccCCC
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK-LILVSTNGSIIRLFDAFNGNCV--QSLSGVLNNNA 441 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~~~~~--~~~~~~~~~~~ 441 (515)
+|+.|..|++||.|+..+.. ......+.|..+.++|.-. .++.++.-+-.++-+...+... ..+..+..+.+
T Consensus 228 TGsYDe~i~~~DtRnm~kPl-----~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdS 302 (339)
T KOG0280|consen 228 TGSYDECIRVLDTRNMGKPL-----FKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDS 302 (339)
T ss_pred EeccccceeeeehhcccCcc-----ccCccccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeeccccccc
Confidence 99999999999999754221 1233447889999999532 3333344444677776654322 22333333433
Q ss_pred CCEEEEEecCCCEEEEEe-CCCcEE-EEECCCC
Q psy6127 442 SPLEATFTPDSQFVASGS-TDGQVH-IWNAERG 472 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs-~dg~I~-iwd~~~~ 472 (515)
-+..-.|.....++|+++ .|..++ +|-.-++
T Consensus 303 l~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 303 LCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred eeeccccccccceeeeeeccccceeeeeeeccC
Confidence 344445544445688765 566544 6654444
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.3e-10 Score=125.24 Aligned_cols=201 Identities=12% Similarity=0.233 Sum_probs=158.5
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
.+.|-..|.++.=+|...+.+||+.||.|++|....++.+..++. ....|+.+.|+.+|+..-++- .||.+.+|...
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d--~dg~l~l~q~~ 2281 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVD--GDGDLSLWQAS 2281 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeec--cCCceeecccC
Confidence 345667788888889888999999999999999998888777642 337899999999998877665 59999999987
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEe---CCCcEEEEEcCCCCe--EEEEecCCCeeEEEECCCCCEEEEEECCC
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGS---YDKTVRVWDLRQPNN--VGMIQLSGNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 370 (515)
.++....+.|....++..|-. ..+++++ .++.+.+||..-... .-...|.+.++++++.|..+.|++|+.+|
T Consensus 2282 -pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G 2358 (2439)
T KOG1064|consen 2282 -PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKG 2358 (2439)
T ss_pred -CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcC
Confidence 667777888999999999984 6677765 478899999754322 22245667799999999999999999999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
.|++||++..+.. ..++ . +. ...++++|+..|.++||++.....+..+....
T Consensus 2359 ~v~l~D~rqrql~--h~~~----------~--~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ 2410 (2439)
T KOG1064|consen 2359 EVCLFDIRQRQLR--HTFQ----------A--LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEH 2410 (2439)
T ss_pred cEEEeehHHHHHH--HHhh----------h--hh-hhheeeccCcccceEEEEccccchhhcCchhh
Confidence 9999999874311 1111 1 33 45689999999999999999887777776543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.1e-08 Score=108.71 Aligned_cols=244 Identities=11% Similarity=0.116 Sum_probs=157.2
Q ss_pred eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC--------------CCCCeEEEEEcCCCCEEEEEe-CCCcE
Q psy6127 267 DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG--------------HVRKVSSLNLSPVDDSFISGS-YDKTV 331 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~--------------h~~~v~~l~~~~~~~~l~s~s-~dg~i 331 (515)
..+++++.+..++++- ..++.|+++|... ..+..+.+ +-.....+++.++++.|+.+. ..+.|
T Consensus 571 ~gvavd~~~g~lyVaD-s~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I 648 (1057)
T PLN02919 571 GKLAIDLLNNRLFISD-SNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL 648 (1057)
T ss_pred ceEEEECCCCeEEEEE-CCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence 4678888766666665 4688999999764 44433322 112357899999888666655 45779
Q ss_pred EEEEcCCCCeEEEEec------------------CCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCCCCce----ee
Q psy6127 332 RVWDLRQPNNVGMIQL------------------SGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFA----SF 388 (515)
Q Consensus 332 ~iwd~~~~~~~~~~~~------------------~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~----~~ 388 (515)
+.+|..++... ++.. -.....++++| ++..+++.+.++.|++||..++...... ..
T Consensus 649 r~id~~~~~V~-tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~ 727 (1057)
T PLN02919 649 REIDFVNETVR-TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYER 727 (1057)
T ss_pred EEEecCCCEEE-EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccc
Confidence 99998776532 2211 11245789999 5666677778899999998654210000 00
Q ss_pred ec-----CCCCCcCeEEEEEcCCCCEEEEE-ECCCcEEEEECCCCceeEEeecc------------c------cCCCCCE
Q psy6127 389 KC-----PGERGCEWTGLKFSPDGKLILVS-TNGSIIRLFDAFNGNCVQSLSGV------------L------NNNASPL 444 (515)
Q Consensus 389 ~~-----~~~~~~~i~~l~~sp~~~~l~~~-s~dg~i~iwd~~~~~~~~~~~~~------------~------~~~~~i~ 444 (515)
.. ..........++++|++++|+++ +.++.|++||+.++.......+. . ..-....
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~ 807 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL 807 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence 00 00111234579999999866554 46789999999876532111000 0 0011256
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC------------CCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 445 EATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD------------HPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------------h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
.++++++|.++++-+.++.|++||..++........+ .-.....++++++|+++++.+++ |++|++
T Consensus 808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~ 887 (1057)
T PLN02919 808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDL 887 (1057)
T ss_pred eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 8999999998888889999999999887665433210 12356789999999987776544 999998
Q ss_pred CCC
Q psy6127 511 TLS 513 (515)
Q Consensus 511 ~~~ 513 (515)
+..
T Consensus 888 ~~~ 890 (1057)
T PLN02919 888 NKG 890 (1057)
T ss_pred CCC
Confidence 654
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-07 Score=88.93 Aligned_cols=223 Identities=16% Similarity=0.147 Sum_probs=149.0
Q ss_pred EEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec
Q psy6127 226 SLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 226 ~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~ 304 (515)
++.|.+ ++.++++--..+.|..|+..+++... +.... ...+++...+..++++. .+.+.++|..+++......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~---~~~~~~~d~~~g~~~~~~~ 77 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVAD---SGGIAVVDPDTGKVTVLAD 77 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEE---TTCEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEE---cCceEEEecCCCcEEEEee
Confidence 567888 67777776678999999998776543 33222 67777874445566554 4566667999886543332
Q ss_pred C-----CCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEE-EEECCC
Q psy6127 305 G-----HVRKVSSLNLSPVDDSFISGSYD--------KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFA-IGVNSD 370 (515)
Q Consensus 305 ~-----h~~~v~~l~~~~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~g~~dg 370 (515)
. .....+.+++.|+|+..++.... |.|..++.. ++.......-...+.++|+|+++.|+ +-+..+
T Consensus 78 ~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~ 156 (246)
T PF08450_consen 78 LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNG 156 (246)
T ss_dssp EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTT
T ss_pred ccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccc
Confidence 2 34678899999999977766543 557777777 55444444445578899999999776 455678
Q ss_pred cEEEEEeecCCCCCc--eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 371 SIKLYDVRSYDKGPF--ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~--~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
.|..|++........ ..+..........-.+++.++|+..++....+.|.+++.. |+.+..+..... .+++++|
T Consensus 157 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~---~~t~~~f 232 (246)
T PF08450_consen 157 RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVP---RPTNCAF 232 (246)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSS---SEEEEEE
T ss_pred eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCC---CEEEEEE
Confidence 899999875432111 1121122222346789999999988887789999999976 888887776422 4899999
Q ss_pred e-cCCCEEEEEe
Q psy6127 449 T-PDSQFVASGS 459 (515)
Q Consensus 449 s-p~g~~l~sgs 459 (515)
. ++.+.|+..+
T Consensus 233 gg~~~~~L~vTt 244 (246)
T PF08450_consen 233 GGPDGKTLYVTT 244 (246)
T ss_dssp ESTTSSEEEEEE
T ss_pred ECCCCCEEEEEe
Confidence 4 6666665543
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=2e-10 Score=113.88 Aligned_cols=284 Identities=14% Similarity=0.230 Sum_probs=187.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeeeeEec-CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC--
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ-GTSKNTIN-SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD-- 296 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~-~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-- 296 (515)
.+++.++..+|.|+-+|.++.-| +.+-|+.. +.+.+-+. ...-.|..+.|+|....-+-+.......-.+|++..
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss 102 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS 102 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence 45678889999999999999877 55666654 33333332 222346778888765432222212466677888743
Q ss_pred -CeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCe-EEEE-ecCCCeeEEEECCCCCEEEEEECCCcE
Q psy6127 297 -NKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNN-VGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSI 372 (515)
Q Consensus 297 -~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~-~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i 372 (515)
......+.+|...|+.+.|+|..+ .+++++.|-.+..||+++... +... .-......+.|+-....+.+.+....|
T Consensus 103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i 182 (1081)
T KOG0309|consen 103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI 182 (1081)
T ss_pred ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence 334455689999999999999876 789999999999999998754 3332 334456778998866666666788899
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
.+||.+.+.. .+.....+...+..+.|.. ....+.+++.|++|+.||........... .....+++.-.+-|-
T Consensus 183 ~vwd~r~gs~----pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~--vtt~~piw~~r~~Pf 256 (1081)
T KOG0309|consen 183 FVWDLRKGST----PLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRT--VTTNFPIWRGRYLPF 256 (1081)
T ss_pred EEEeccCCCc----ceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccccccee--ccccCcceecccccc
Confidence 9999998652 2233345777788888865 23467889999999999986543221111 113344666677775
Q ss_pred CC--EEEEEeCCCcEEE---------EECCC-CeEEEEEcCCCCCCeEEEEECCCC----------CEEEEeeCC--EEE
Q psy6127 452 SQ--FVASGSTDGQVHI---------WNAER-GYKVCVLDGDHPSAVQSLQFNPKY----------HMLASACSN--MAF 507 (515)
Q Consensus 452 g~--~l~sgs~dg~I~i---------wd~~~-~~~~~~~~~~h~~~V~~l~~sp~~----------~~las~~~d--v~i 507 (515)
|. ++.---.+..+.+ |+..+ .+++.++.+ |.+.|..+.|-..+ ..|++=+.| +|+
T Consensus 257 g~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~G-H~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrl 335 (1081)
T KOG0309|consen 257 GEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVG-HDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRL 335 (1081)
T ss_pred CceeEeccccCCeeeeeccccchhhhhccccCCcceeeecC-cchHHHHHhhhhcccccCCCCccceeEEEeecCCceEe
Confidence 44 2221112223444 34333 468899988 99999888775422 257887765 999
Q ss_pred EcCCC
Q psy6127 508 WIPTL 512 (515)
Q Consensus 508 W~~~~ 512 (515)
|-++.
T Consensus 336 WpI~~ 340 (1081)
T KOG0309|consen 336 WPIDS 340 (1081)
T ss_pred eeccH
Confidence 98764
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.3e-08 Score=98.87 Aligned_cols=210 Identities=12% Similarity=0.074 Sum_probs=133.6
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE-EEEEeC---CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCC
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS-FISGSY---DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGL 361 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~ 361 (515)
...|.+-|.+......... .. ......|+|||+. ++..+. +..|.++|+.+++........+......|+|||+
T Consensus 168 ~~~l~~~d~dg~~~~~~~~-~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~ 245 (419)
T PRK04043 168 KSNIVLADYTLTYQKVIVK-GG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGS 245 (419)
T ss_pred cceEEEECCCCCceeEEcc-CC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCC
Confidence 3467776765444333333 33 7889999999984 654443 3568999999988776665555566788999998
Q ss_pred EEEEEE-CC--CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-C--cEEEEECCCCceeEEeec
Q psy6127 362 AFAIGV-NS--DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-S--IIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 362 ~l~~g~-~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-g--~i~iwd~~~~~~~~~~~~ 435 (515)
.++... .+ ..|.++|+..+.. ..+.. .........|+|||+.|+..+.. + .|++.|+.+++..+....
T Consensus 246 ~la~~~~~~g~~~Iy~~dl~~g~~---~~LT~---~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~ 319 (419)
T PRK04043 246 KLLLTMAPKGQPDIYLYDTNTKTL---TQITN---YPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH 319 (419)
T ss_pred EEEEEEccCCCcEEEEEECCCCcE---EEccc---CCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC
Confidence 877643 33 4577777765431 12211 11122356899999988877642 2 688888888776443321
Q ss_pred cccCCCCCEEEEEecCCCEEEEEeCC---------CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC---
Q psy6127 436 VLNNNASPLEATFTPDSQFVASGSTD---------GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS--- 503 (515)
Q Consensus 436 ~~~~~~~i~~~~~sp~g~~l~sgs~d---------g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--- 503 (515)
+. ....|+|||++++..+.. ..|.+.|+.++.... +.. . +......|+|||+.++..+.
T Consensus 320 --g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~-LT~-~-~~~~~p~~SPDG~~I~f~~~~~~ 390 (419)
T PRK04043 320 --GK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR-LTA-N-GVNQFPRFSSDGGSIMFIKYLGN 390 (419)
T ss_pred --CC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE-CCC-C-CCcCCeEECCCCCEEEEEEccCC
Confidence 11 124899999988776543 368888998886543 332 2 23346899999998877652
Q ss_pred CEEEEcCCC
Q psy6127 504 NMAFWIPTL 512 (515)
Q Consensus 504 dv~iW~~~~ 512 (515)
...+|-++.
T Consensus 391 ~~~L~~~~l 399 (419)
T PRK04043 391 QSALGIIRL 399 (419)
T ss_pred cEEEEEEec
Confidence 244554443
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=110.85 Aligned_cols=286 Identities=11% Similarity=0.117 Sum_probs=180.8
Q ss_pred cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccc-----eeeeeEeeeeccccCCcEEEEEEcCCCCEEEEE
Q psy6127 165 LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSEN-----LVRSYRVAKVFRENTDKINSLDYSSDGSLLISC 239 (515)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~-----~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasg 239 (515)
+..+.||...+.++....+.+. ..|.+.|.++++|.- .+.+-.|..+++.|+.+|.++.|-.+-++++++
T Consensus 728 L~nf~GH~~~iRai~AidNENS-----FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc 802 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENS-----FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC 802 (1034)
T ss_pred eecccCcHHHhHHHHhcccccc-----eeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec
Confidence 3345566555555544444332 247889999999971 123445788999999999999999999888876
Q ss_pred eCCCeEEEEECCCCeeeeEec--CCCCceeEEEEecC-CCeEEEEEeeCCCeEEEEECCCCeeeEEe-----cCCCCCeE
Q psy6127 240 SDDDQIIIYDCEQGTSKNTIN--SKKYGVDLIKFTHS-KTTAIHASTKVDATLRYLSLHDNKYVRYF-----PGHVRKVS 311 (515)
Q Consensus 240 s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~s~~~d~~v~vwd~~~~~~~~~~-----~~h~~~v~ 311 (515)
||-|.+||.--++.+.... ...+.+..+...++ ...++++.++...+|+++|.+..+....+ .+..+-+.
T Consensus 803 --D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R 880 (1034)
T KOG4190|consen 803 --DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTR 880 (1034)
T ss_pred --cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhee
Confidence 7889999988777665332 22344555555555 55667777678999999999988766544 34567789
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC-CeeEEEECCCCCEEEEEECCCcEEE-EEeecCCCCCceeee
Q psy6127 312 SLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG-NKPIAAYDPEGLAFAIGVNSDSIKL-YDVRSYDKGPFASFK 389 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~~g~~dg~i~i-~d~~~~~~~~~~~~~ 389 (515)
+++..|.|+.++.+-..|.|.+.|.++|+.+.....-. ....+ -.|..+.++....|.++.+ |..-.+.. .+.
T Consensus 881 ~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllql-aapsdq~L~~saldHslaVnWhaldgim----h~q 955 (1034)
T KOG4190|consen 881 AIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQL-AAPSDQALAQSALDHSLAVNWHALDGIM----HLQ 955 (1034)
T ss_pred EEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhh-cCchhHHHHhhcccceeEeeehhcCCee----eec
Confidence 99999999999999999999999999998876553211 11111 1345556666667777777 75544220 111
Q ss_pred cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-C---ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 390 CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-G---NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 390 ~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-~---~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
. .....+ .--.-.-|.-++++.....+.+|.-.. . ..+..+.. ....+..++++.-|-+.-+..|.+.|.|.
T Consensus 956 ~-kpppep--ahflqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~-d~f~G~lTala~LPLN~afLaGne~G~Ia 1031 (1034)
T KOG4190|consen 956 D-KPPPEP--AHFLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRP-DEFPGTLTALAPLPLNCAFLAGNEHGAIA 1031 (1034)
T ss_pred c-CCCCcc--hhhhhccCceeEEeccCcEEEEEecchhhhhhhhhccccc-cccCCccceeeeccccchhhccCCCCcee
Confidence 0 000000 000111345566666666777774211 0 11111111 11223367777778777677788888876
Q ss_pred E
Q psy6127 466 I 466 (515)
Q Consensus 466 i 466 (515)
+
T Consensus 1032 L 1032 (1034)
T KOG4190|consen 1032 L 1032 (1034)
T ss_pred e
Confidence 5
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.9e-11 Score=121.87 Aligned_cols=265 Identities=15% Similarity=0.220 Sum_probs=192.2
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
.++..++|+.|+...+|++|+.+.+.|+.|+-.|.|+++++.+|........|..+++.+.-+.+|...++.+++..--.
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchH
Confidence 45666789999999999999999999999999999999999999999999999999999999999999888775545578
Q ss_pred EEEECCC-CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-----ecCCCeeEEEECCCCCEE
Q psy6127 290 RYLSLHD-NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-----QLSGNKPIAAYDPEGLAF 363 (515)
Q Consensus 290 ~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~~~~~~~s~~~~~l 363 (515)
.+|++.+ +...++|. .-.++.|+.....-+.|.......+||+.++....++ .....-++..|+|+..++
T Consensus 1170 aLW~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LI 1245 (1516)
T KOG1832|consen 1170 ALWDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLI 1245 (1516)
T ss_pred HHhccccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceE
Confidence 8999854 44555554 3467888876555555666677899999999877664 122234678999999887
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCC
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP 443 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 443 (515)
. .|| .+||++..+ .+..+. .....+ .-.|+|.|..++.-+ .|||+++.+.++...... -
T Consensus 1246 l---ndG--vLWDvR~~~--aIh~FD---~ft~~~-~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld-----q 1304 (1516)
T KOG1832|consen 1246 L---NDG--VLWDVRIPE--AIHRFD---QFTDYG-GGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD-----Q 1304 (1516)
T ss_pred e---eCc--eeeeeccHH--HHhhhh---hheecc-cccccCCCceEEeec-----hhhhhHHHHHHhcCcccc-----c
Confidence 6 355 479998753 111111 111111 456999999988765 489999998887766433 2
Q ss_pred EEEEEecCCCEEEEEe--C----C-----------CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 444 LEATFTPDSQFVASGS--T----D-----------GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs--~----d-----------g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
..+.|+..|..++..- . | ...+-+|..+-+.+.+++. ..+|.+++-+|...+++.-
T Consensus 1305 c~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v--~R~~~Dlct~~~D~~l~vI 1377 (1516)
T KOG1832|consen 1305 CAVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPV--DRCLLDLCTEPTDSFLGVI 1377 (1516)
T ss_pred eEEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeec--ccchhhhhcCCccceEEEE
Confidence 5788998888766432 0 0 1234455555566677764 4567788888877777653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.4e-08 Score=86.54 Aligned_cols=261 Identities=11% Similarity=-0.053 Sum_probs=165.3
Q ss_pred CCeEEEEECCCCe--eeeEecCCCCceeEEEEecC---CCeEEEEEeeCCCeEEEEECCCCeee-EEecCCCCCeEEEEE
Q psy6127 242 DDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHS---KTTAIHASTKVDATLRYLSLHDNKYV-RYFPGHVRKVSSLNL 315 (515)
Q Consensus 242 dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~---~~~l~~~s~~~d~~v~vwd~~~~~~~-~~~~~h~~~v~~l~~ 315 (515)
...+-+|+..+.. .+... ..+.|.|. ++-..++.|+..|...+|...+.+.. .....|...|+-+.=
T Consensus 51 t~sv~i~~~y~N~~~iv~~y-------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r 123 (344)
T KOG4532|consen 51 TISVPINSHYSNPKGIVEFY-------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKR 123 (344)
T ss_pred eeeeEeccccCCchhhEEee-------ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhh
Confidence 3456777766543 12212 33445442 23334445557899999998866543 333444444433322
Q ss_pred cCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC
Q psy6127 316 SPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE 393 (515)
Q Consensus 316 ~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~ 393 (515)
..+.+ .+..++.|.++++.++..+......... -...+++++++++++++.+....|-.|.+......... ... ..
T Consensus 124 ~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~-~~~-a~ 201 (344)
T KOG4532|consen 124 YCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIEN-IYE-AP 201 (344)
T ss_pred hcccccceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeee-eEe-cc
Confidence 22222 4667788999999988766544444332 23788999999999999999999999998865433222 111 12
Q ss_pred CCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEe--eccccCCCCCEEEEEecCCC--EEEEEeCCCcEEEEEC
Q psy6127 394 RGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSL--SGVLNNNASPLEATFTPDSQ--FVASGSTDGQVHIWNA 469 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~i~~~~~sp~g~--~l~sgs~dg~I~iwd~ 469 (515)
....-.+..|+.....+|++..||++.|||++........ .....+.+.+..+.|++.|. +|+..-.-+.+.+-|+
T Consensus 202 t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~ 281 (344)
T KOG4532|consen 202 TSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDT 281 (344)
T ss_pred cCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEc
Confidence 2222247899999999999999999999999865433222 12233667799999998763 5665555678999999
Q ss_pred CCCeEEEEEcC------CCCC-CeEEEEECCCCCEEEEeeCC-EEEEcCC
Q psy6127 470 ERGYKVCVLDG------DHPS-AVQSLQFNPKYHMLASACSN-MAFWIPT 511 (515)
Q Consensus 470 ~~~~~~~~~~~------~h~~-~V~~l~~sp~~~~las~~~d-v~iW~~~ 511 (515)
++++....+.. .|.. .|..-.|+.++.-+.+.+.+ +.=|++.
T Consensus 282 R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~~ae~ni~ 331 (344)
T KOG4532|consen 282 RNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQGAEYNIL 331 (344)
T ss_pred ccCceeeEEecCccccccccccccccccccCCCcccccccchhhheeecc
Confidence 99865554432 1322 37788888877666555543 4445443
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.6e-08 Score=91.09 Aligned_cols=146 Identities=11% Similarity=0.143 Sum_probs=121.2
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDD-QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg-~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
+|.+.|.-..+..+++-++.|..|| .+-|+|..+++. +.+...-+.|.++..+++|+.++++. ....+.+.|++++
T Consensus 357 ~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaN--dr~el~vididng 433 (668)
T COG4946 357 GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVAN--DRFELWVIDIDNG 433 (668)
T ss_pred CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEc--CceEEEEEEecCC
Confidence 6778888888888888899999998 899999986654 45666668899999999999888774 5778999999999
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK----TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 367 (515)
.....-+...+-|+...|+|+++++|-+--+| .|+++|+..++..........-.+-+|+|++++|..-+
T Consensus 434 nv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 434 NVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred CeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence 87766666778899999999999999887665 58999999988777665555567789999999987765
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.7e-09 Score=94.32 Aligned_cols=247 Identities=19% Similarity=0.322 Sum_probs=164.1
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----eeeEecCCC------------CceeEEEEecCCCe-EEEE
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-----SKNTINSKK------------YGVDLIKFTHSKTT-AIHA 281 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~~-l~~~ 281 (515)
....|+++.|...|.||++|...|.|.++.-+... ....+++|+ ..|..+.|..++.+ -++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 35679999999999999999999999999865432 222345553 34778888766543 3333
Q ss_pred EeeCCCeEEEEECCCCee-------------------------------------e-----EEe-cCCCCCeEEEEEcCC
Q psy6127 282 STKVDATLRYLSLHDNKY-------------------------------------V-----RYF-PGHVRKVSSLNLSPV 318 (515)
Q Consensus 282 s~~~d~~v~vwd~~~~~~-------------------------------------~-----~~~-~~h~~~v~~l~~~~~ 318 (515)
+ ..|.+|++|.+..... + +.+ ..|.-.+.++.|+.|
T Consensus 105 s-tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD 183 (460)
T COG5170 105 S-TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSD 183 (460)
T ss_pred e-cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCc
Confidence 4 3799999998754310 0 111 357777889999998
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCeEEEE----ec-----CCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCC----CC
Q psy6127 319 DDSFISGSYDKTVRVWDLRQPNNVGMI----QL-----SGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDK----GP 384 (515)
Q Consensus 319 ~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~-----~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~----~~ 384 (515)
...++++ .|=.|.+|++.-......+ ++ ..-+++..|+|. .+.+...+..|.|++-|++.... ..
T Consensus 184 ~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k 262 (460)
T COG5170 184 KETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK 262 (460)
T ss_pred hheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence 8877775 5678999988754322221 11 123667889985 45677778899999999984221 00
Q ss_pred ceeee-------cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-ceeEEeeccccC---------CC---CCE
Q psy6127 385 FASFK-------CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-NCVQSLSGVLNN---------NA---SPL 444 (515)
Q Consensus 385 ~~~~~-------~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~---------~~---~i~ 444 (515)
..... ......+.|..+.|+|+|+++++-+. -++++||++.. .+++++..|... .. .-.
T Consensus 263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkF 341 (460)
T COG5170 263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKF 341 (460)
T ss_pred hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeE
Confidence 00000 11122346788999999999987654 58999999864 466666543221 11 125
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 445 EATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 445 ~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
.+.|+.|.+.+.+|+..+..-+|-.
T Consensus 342 eisfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 342 EISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred EEEecCCcccccccccccceeeecc
Confidence 6788989899999988777777753
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-09 Score=94.85 Aligned_cols=202 Identities=17% Similarity=0.168 Sum_probs=141.3
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC-CCeee
Q psy6127 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH-DNKYV 300 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~-~~~~~ 300 (515)
-.++.|++.+..++++-.+|.+.+-+....... +.++.|+.+.+...|+...+.++..+ +.|+.+..||++ .++.+
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytG-gDD~~l~~~D~R~p~~~i 202 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTG-GDDGSLSCWDIRIPKTFI 202 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEec-CCCceEEEEEecCCccee
Confidence 457889999999999999999986665544443 47899999999999998887666544 689999999998 44444
Q ss_pred EE-ecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcC-CCCeEEEEecCCCeeEEEECCCC--CEEEEEECCCcEEEE
Q psy6127 301 RY-FPGHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLR-QPNNVGMIQLSGNKPIAAYDPEG--LAFAIGVNSDSIKLY 375 (515)
Q Consensus 301 ~~-~~~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~s~~~--~~l~~g~~dg~i~i~ 375 (515)
.. .+-|...|.++.-+|. +.++++|+.|..|++||.+ -++++..-...+.+.-+..+|.- ..++++-.+ -.++-
T Consensus 203 ~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~-G~ki~ 281 (339)
T KOG0280|consen 203 WHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHN-GAKIL 281 (339)
T ss_pred eecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhc-CceEE
Confidence 33 4568899999998875 5599999999999999999 56777777777889999999853 334443333 34566
Q ss_pred EeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEE-EEECCCC
Q psy6127 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIR-LFDAFNG 427 (515)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~-iwd~~~~ 427 (515)
+...........+.....|.+-...-.|......+++++ .|+.++ +|-.-++
T Consensus 282 ~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 282 DSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred EecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence 655543332223344455665555555544445677765 455544 6644333
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=3e-09 Score=105.37 Aligned_cols=231 Identities=15% Similarity=0.178 Sum_probs=167.8
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee---------------eEEecCCCCCeEEEEEcCCCCEEEEEeC
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY---------------VRYFPGHVRKVSSLNLSPVDDSFISGSY 327 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~---------------~~~~~~h~~~v~~l~~~~~~~~l~s~s~ 327 (515)
.....|++|+....+++++ +.||.+++..+.+... -+++.||.+.|.-+.|+.+.+.|-+...
T Consensus 14 nvkL~c~~WNke~gyIAcg--G~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACG--GADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred CceEEEEEEcccCCeEEec--cccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 3567899999988877665 4799999998765321 2457899999999999999999999999
Q ss_pred CCcEEEEEcCCCCeEEEE---ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEc
Q psy6127 328 DKTVRVWDLRQPNNVGMI---QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFS 404 (515)
Q Consensus 328 dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~s 404 (515)
+|-|.+|-+-.+.....+ ...+.+.+++|..+|..++....||.|.+=.+...+ +-...-.......+.|+
T Consensus 92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR------IwgKeLkg~~l~hv~ws 165 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR------IWGKELKGQLLAHVLWS 165 (1189)
T ss_pred CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce------ecchhcchheccceeec
Confidence 999999998877654332 233447899999999999999999999887776532 11111122234478999
Q ss_pred CCCCEEEEEECCCcEEEEECCCC-------ceeEEeec-cccCCCCCEEEEEe--------cCCCEEEEEeCCCcEEEEE
Q psy6127 405 PDGKLILVSTNGSIIRLFDAFNG-------NCVQSLSG-VLNNNASPLEATFT--------PDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 405 p~~~~l~~~s~dg~i~iwd~~~~-------~~~~~~~~-~~~~~~~i~~~~~s--------p~g~~l~sgs~dg~I~iwd 468 (515)
||.+.++.+-..|.+.+||.... .+.....+ ..+....+..+.|. ||...++.+-.+|.+.|..
T Consensus 166 ~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR 245 (1189)
T KOG2041|consen 166 EDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMR 245 (1189)
T ss_pred ccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhh
Confidence 99999888889999999996432 12111111 11122224455554 5778999999999999887
Q ss_pred CCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 469 AERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 469 ~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
-.+......+. ..-.|....|+++|.+||.++.
T Consensus 246 ~eND~~Pvv~d--tgm~~vgakWnh~G~vLAvcG~ 278 (1189)
T KOG2041|consen 246 SENDPEPVVVD--TGMKIVGAKWNHNGAVLAVCGN 278 (1189)
T ss_pred hcCCCCCeEEe--cccEeecceecCCCcEEEEccC
Confidence 65554444444 3367899999999999999874
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.2e-09 Score=97.74 Aligned_cols=207 Identities=12% Similarity=0.184 Sum_probs=140.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe-----EEEEe-------------cCCCeeEEEECCCCC--EEEE
Q psy6127 306 HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN-----VGMIQ-------------LSGNKPIAAYDPEGL--AFAI 365 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~-----~~~~~-------------~~~~~~~~~~s~~~~--~l~~ 365 (515)
..+-|.++.|...|.+|++|..+|.|.++.-..... ...++ ...++..+.|.++++ .++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 345689999999999999999999999996543221 11221 123456678887654 5777
Q ss_pred EECCCcEEEEEeecCCCCC------------------ce-------------eeecCCCCCcCeEEEEEcCCCCEEEEEE
Q psy6127 366 GVNSDSIKLYDVRSYDKGP------------------FA-------------SFKCPGERGCEWTGLKFSPDGKLILVST 414 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~------------------~~-------------~~~~~~~~~~~i~~l~~sp~~~~l~~~s 414 (515)
.+.|.+|++|.++...... .. .......|...|.++.++.|+..++++
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA- 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA- 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-
Confidence 7899999999987643222 00 001124567788999999999888765
Q ss_pred CCCcEEEEECCCCceeEEeeccccC-----CCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeEE------EEEcC--
Q psy6127 415 NGSIIRLFDAFNGNCVQSLSGVLNN-----NASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYKV------CVLDG-- 480 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~------~~~~~-- 480 (515)
.|=.|.+|++.--.....+.....+ ..-|++..|+|.. .+++-.+..|+|++-|++...+. ...+.
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 5678999998644332222222111 1237888999964 56777788999999999843221 11110
Q ss_pred -------CCCCCeEEEEECCCCCEEEEee-CCEEEEcCCCC
Q psy6127 481 -------DHPSAVQSLQFNPKYHMLASAC-SNMAFWIPTLS 513 (515)
Q Consensus 481 -------~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~~~ 513 (515)
.--..|.++.|++.|+++++-+ -++++||+.+.
T Consensus 263 ~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme 303 (433)
T KOG1354|consen 263 SSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNME 303 (433)
T ss_pred cchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEecccc
Confidence 0234688999999999999988 56999999765
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=118.42 Aligned_cols=226 Identities=12% Similarity=0.142 Sum_probs=162.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec-CCCCCeE
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP-GHVRKVS 311 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~-~h~~~v~ 311 (515)
++.+.....++...-|..+.+... ++.+-..|.++.-+|...+.+++ +.||.|++|....++.+..++ .....|+
T Consensus 2180 s~~~~~~n~~~~~~tq~~~~~~~~--~k~~v~~v~r~~sHp~~~~Yltg--s~dgsv~~~~w~~~~~v~~~rt~g~s~vt 2255 (2439)
T KOG1064|consen 2180 SNRFTPSNLPWLGSTQTSRGASVM--IKHPVENVRRMTSHPSDPYYLTG--SQDGSVRMFEWGHGQQVVCFRTAGNSRVT 2255 (2439)
T ss_pred cccCCcccCCccccceecccceeE--eecccCceeeecCCCCCceEEec--CCCceEEEEeccCCCeEEEeeccCcchhh
Confidence 344444455555555654432221 23334567777777776655544 579999999998888876664 2348899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEE---CCCcEEEEEeecCCCCCcee
Q psy6127 312 SLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGV---NSDSIKLYDVRSYDKGPFAS 387 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~---~dg~i~i~d~~~~~~~~~~~ 387 (515)
.+.|+.+|+.+..+..||.+.+|.+. .++.... .+......+.|-. ..+++.+ .++.+.+||.........
T Consensus 2256 r~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~-- 2330 (2439)
T KOG1064|consen 2256 RSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSL-- 2330 (2439)
T ss_pred hhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccce--
Confidence 99999999999999999999999987 3333333 3333344455543 4555543 578899999765432211
Q ss_pred eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 388 FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 388 ~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
....|.+..+++++-|..+.+++|+.+|.|++||++..+.++.++. ++ ...++++|+..|.++||
T Consensus 2331 --v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~------------~~-~~~~f~~~ss~g~ikIw 2395 (2439)
T KOG1064|consen 2331 --VHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA------------LD-TREYFVTGSSEGNIKIW 2395 (2439)
T ss_pred --eeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh------------hh-hhheeeccCcccceEEE
Confidence 1267888899999999999999999999999999998887766653 33 46789999999999999
Q ss_pred ECCCCeEEEEEcCCC
Q psy6127 468 NAERGYKVCVLDGDH 482 (515)
Q Consensus 468 d~~~~~~~~~~~~~h 482 (515)
++.....+..++..|
T Consensus 2396 ~~s~~~ll~~~p~e~ 2410 (2439)
T KOG1064|consen 2396 RLSEFGLLHTFPSEH 2410 (2439)
T ss_pred EccccchhhcCchhh
Confidence 999988888887655
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.2e-07 Score=83.63 Aligned_cols=220 Identities=13% Similarity=0.103 Sum_probs=140.2
Q ss_pred eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEcCCCCeEEEE
Q psy6127 267 DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLS-PVDDSFISGSYDKTVRVWDLRQPNNVGMI 345 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 345 (515)
.++.|.+....++.+. -..+.|..|+..+++....-. .. ...+++. ++ ..++.+..++ +.++|..+++.....
T Consensus 3 Egp~~d~~~g~l~~~D-~~~~~i~~~~~~~~~~~~~~~-~~--~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g~~~~~~ 76 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVD-IPGGRIYRVDPDTGEVEVIDL-PG--PNGMAFDRPD-GRLYVADSGG-IAVVDPDTGKVTVLA 76 (246)
T ss_dssp EEEEEETTTTEEEEEE-TTTTEEEEEETTTTEEEEEES-SS--EEEEEEECTT-SEEEEEETTC-EEEEETTTTEEEEEE
T ss_pred cceEEECCCCEEEEEE-cCCCEEEEEECCCCeEEEEec-CC--CceEEEEccC-CEEEEEEcCc-eEEEecCCCcEEEEe
Confidence 3577888666676665 368999999998887644222 11 7777887 55 4555555544 556699988665544
Q ss_pred ec------CCCeeEEEECCCCCEEEEEECC--------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 346 QL------SGNKPIAAYDPEGLAFAIGVNS--------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 346 ~~------~~~~~~~~~s~~~~~l~~g~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
.. ....+.++++|+|++.++.... |.+..++.. ++ .... ...-...+.++|+|+++.|+
T Consensus 77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~---~~~~---~~~~~~pNGi~~s~dg~~ly 149 (246)
T PF08450_consen 77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GK---VTVV---ADGLGFPNGIAFSPDGKTLY 149 (246)
T ss_dssp EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SE---EEEE---EEEESSEEEEEEETTSSEEE
T ss_pred eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-Ce---EEEE---ecCcccccceEECCcchhee
Confidence 33 1235679999999977776543 334444444 11 1111 11223457999999999876
Q ss_pred E-EECCCcEEEEECCCCce----eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCe
Q psy6127 412 V-STNGSIIRLFDAFNGNC----VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAV 486 (515)
Q Consensus 412 ~-~s~dg~i~iwd~~~~~~----~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 486 (515)
+ -+..+.|..+++..... ...+.........+-.+++.++|++.++....+.|.+++.+ |+.+..+.. ....+
T Consensus 150 v~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~-p~~~~ 227 (246)
T PF08450_consen 150 VADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIEL-PVPRP 227 (246)
T ss_dssp EEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE--SSSSE
T ss_pred ecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcC-CCCCE
Confidence 5 45678899998853322 12222222222236789999999988887788999999987 998888876 34589
Q ss_pred EEEEE-CCCCCEEEEe
Q psy6127 487 QSLQF-NPKYHMLASA 501 (515)
Q Consensus 487 ~~l~~-sp~~~~las~ 501 (515)
++++| -|+.+.|...
T Consensus 228 t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 228 TNCAFGGPDGKTLYVT 243 (246)
T ss_dssp EEEEEESTTSSEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 99999 4665555443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.7e-07 Score=83.97 Aligned_cols=223 Identities=17% Similarity=0.125 Sum_probs=140.8
Q ss_pred CCCeEEEEECCCCeeeeEecCCCCceeEEE--EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCC
Q psy6127 241 DDDQIIIYDCEQGTSKNTINSKKYGVDLIK--FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPV 318 (515)
Q Consensus 241 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 318 (515)
.+|+|..||..+|+.+....... ...... ..+++..+++++ .++.+..||..+|+.+..+.. ...+.... ..+
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~--~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~ 75 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGP-GIGGPVATAVPDGGRVYVAS--GDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVD 75 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSS-SCSSEEETEEEETTEEEEEE--TTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEE
T ss_pred CCCEEEEEECCCCCEEEEEECCC-CCCCccceEEEeCCEEEEEc--CCCEEEEEECCCCCEEEEeec-ccccccee-eec
Confidence 36899999999999998876422 122222 344566676664 699999999999998877654 22211111 223
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCC----CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC
Q psy6127 319 DDSFISGSYDKTVRVWDLRQPNNVGMI-QLSG----NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE 393 (515)
Q Consensus 319 ~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~----~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~ 393 (515)
+..++.++.++.+..+|.++|+.+... .... ..........+..++++..++.+..+|.++++..- .......
T Consensus 76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w--~~~~~~~ 153 (238)
T PF13360_consen 76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLW--KYPVGEP 153 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEE--EEESSTT
T ss_pred ccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEE--EeecCCC
Confidence 566777778899999999999998874 3221 11222333348888999889999999998865211 1111111
Q ss_pred C-Cc------CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEE
Q psy6127 394 R-GC------EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHI 466 (515)
Q Consensus 394 ~-~~------~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~i 466 (515)
. .. .+..-....++ .++.++.++.+.-+|+.+++.+.... ... +.. ...+++..|+.++.++.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~---~~~-~~~~~~~~l~~~~~~~~l~~ 226 (238)
T PF13360_consen 154 RGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP--ISG---IYS-LPSVDGGTLYVTSSDGRLYA 226 (238)
T ss_dssp -SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC--SS----ECE-CEECCCTEEEEEETTTEEEE
T ss_pred CCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec--CCC---ccC-CceeeCCEEEEEeCCCEEEE
Confidence 1 11 11222222344 77777777764444999998653222 111 111 24567888888889999999
Q ss_pred EECCCCeEEEE
Q psy6127 467 WNAERGYKVCV 477 (515)
Q Consensus 467 wd~~~~~~~~~ 477 (515)
||+.+|+.+-+
T Consensus 227 ~d~~tG~~~W~ 237 (238)
T PF13360_consen 227 LDLKTGKVVWQ 237 (238)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCCEEeE
Confidence 99999987653
|
... |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-06 Score=87.86 Aligned_cols=257 Identities=16% Similarity=0.091 Sum_probs=156.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe-
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV- 310 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v- 310 (515)
++..++.++.+|.+..+|.++|+.+...+........... .+..+++.+ .++.+..+|.++|+.+..+.......
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~--~~g~l~ald~~tG~~~W~~~~~~~~~~ 194 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHT--SNGMLQALNESDGAVKWTVNLDVPSLT 194 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE--ECCEEEEEC--CCCEEEEEEccCCCEeeeecCCCCccc
Confidence 3556778888999999999999998877654321111111 134455443 58999999999999887765321111
Q ss_pred ----EEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCe--------eEEEECC--CCCEEEEEECCCcEEEEE
Q psy6127 311 ----SSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK--------PIAAYDP--EGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 311 ----~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~--------~~~~~s~--~~~~l~~g~~dg~i~i~d 376 (515)
.+.... +..++.++.+|.+..+|..+++.........+. ..+.-+| .+..+++++.+|.+..+|
T Consensus 195 ~~~~~sP~v~--~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald 272 (394)
T PRK11138 195 LRGESAPATA--FGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALD 272 (394)
T ss_pred ccCCCCCEEE--CCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEE
Confidence 111111 345777888999999999998876554322110 0111222 355677777899999999
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
..+++.. ...... ....+.. .+..++.++.+|.+..+|..+|+.+-........ ...+... .+.+++
T Consensus 273 ~~tG~~~----W~~~~~---~~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~--~~~sp~v--~~g~l~ 339 (394)
T PRK11138 273 LRSGQIV----WKREYG---SVNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHR--LLTAPVL--YNGYLV 339 (394)
T ss_pred CCCCCEE----EeecCC---CccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCC--cccCCEE--ECCEEE
Confidence 9886521 111111 1111222 4567888889999999999999765433221111 1122222 256788
Q ss_pred EEeCCCcEEEEECCCCeEEEEEcCCCCCCeEE-EEECCCCCEEEEeeCCEEEEcC
Q psy6127 457 SGSTDGQVHIWNAERGYKVCVLDGDHPSAVQS-LQFNPKYHMLASACSNMAFWIP 510 (515)
Q Consensus 457 sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~-l~~sp~~~~las~~~dv~iW~~ 510 (515)
.++.||.+++.|..+|+.+..... ....+.+ ..+. ++ .|..++.+.+++-+
T Consensus 340 v~~~~G~l~~ld~~tG~~~~~~~~-~~~~~~s~P~~~-~~-~l~v~t~~G~l~~~ 391 (394)
T PRK11138 340 VGDSEGYLHWINREDGRFVAQQKV-DSSGFLSEPVVA-DD-KLLIQARDGTVYAI 391 (394)
T ss_pred EEeCCCEEEEEECCCCCEEEEEEc-CCCcceeCCEEE-CC-EEEEEeCCceEEEE
Confidence 899999999999999999887764 2233322 2222 33 45555666555544
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-06 Score=77.25 Aligned_cols=199 Identities=15% Similarity=0.179 Sum_probs=117.7
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCC-------CCceeEEEEecCC-----C-eEEEEEee
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK-------KYGVDLIKFTHSK-----T-TAIHASTK 284 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~-----~-~l~~~s~~ 284 (515)
+.....=..++||||+.+||.+...|+|+++|+. |..+..+... ...|..+.|.+.. . .+++..
T Consensus 40 kD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~-g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~-- 116 (282)
T PF15492_consen 40 KDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM-GSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVIN-- 116 (282)
T ss_pred CCCCchheEEEECCCCcEEEEEcCCCeEEEEecc-cceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEe--
Confidence 3344455789999999999999999999999987 4444444332 2567777776543 2 233332
Q ss_pred CCCeEEEEECCCC-----eeeEEec---CCCCCeEEEEEcCCCCEEEEEeCCCc-----------EEEEEcCCCCeEEEE
Q psy6127 285 VDATLRYLSLHDN-----KYVRYFP---GHVRKVSSLNLSPVDDSFISGSYDKT-----------VRVWDLRQPNNVGMI 345 (515)
Q Consensus 285 ~d~~v~vwd~~~~-----~~~~~~~---~h~~~v~~l~~~~~~~~l~s~s~dg~-----------i~iwd~~~~~~~~~~ 345 (515)
.+|.++-|-+..+ +....+. .+...|.++.++|..++|+.||.... +..|.+-++.+-...
T Consensus 117 Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~ 196 (282)
T PF15492_consen 117 YRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQ 196 (282)
T ss_pred ccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEE
Confidence 5777776665322 2233332 24678999999999898777765322 222222221111100
Q ss_pred ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy6127 346 QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF 425 (515)
Q Consensus 346 ~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~ 425 (515)
..+.+...-......+..++..++ .+.........|..+..||||+.|++...+|.|.+|++.
T Consensus 197 ---------v~~~~~~~~~~~~~~~~~~~~~~~--------~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iP 259 (282)
T PF15492_consen 197 ---------VTSSEDDITASSKRRGLLRIPSFK--------FFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIP 259 (282)
T ss_pred ---------ccccCccccccccccceeecccee--------eeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecC
Confidence 001111111111111112211111 111123345678899999999999999999999999999
Q ss_pred CCceeEEeecc
Q psy6127 426 NGNCVQSLSGV 436 (515)
Q Consensus 426 ~~~~~~~~~~~ 436 (515)
+-+..+.+...
T Consensus 260 sL~~~~~W~~~ 270 (282)
T PF15492_consen 260 SLRLQRSWKQD 270 (282)
T ss_pred cchhhcccchh
Confidence 88777666543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.6e-06 Score=79.03 Aligned_cols=230 Identities=14% Similarity=0.138 Sum_probs=155.6
Q ss_pred EEEEEEcC-CCCEEEEEeCCC-eEEEEECCCCeeeeEecCCCCce--eEEEEecCCCeEEEEEee---CCCeEEEEECC-
Q psy6127 224 INSLDYSS-DGSLLISCSDDD-QIIIYDCEQGTSKNTINSKKYGV--DLIKFTHSKTTAIHASTK---VDATLRYLSLH- 295 (515)
Q Consensus 224 I~~l~~sp-d~~~lasgs~dg-~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~s~~---~d~~v~vwd~~- 295 (515)
...++.+| ++..++.+-.-| ...+||..+++....+....+.- -.-.|++||+.+++.-.. ..|.|-|||..
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 34677888 566777777665 46789999998887775543322 236799999988876422 36889999998
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEe------------------CCCcEEEEEcCCCCeEEEEec-----CCCee
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGS------------------YDKTVRVWDLRQPNNVGMIQL-----SGNKP 352 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s------------------~dg~i~iwd~~~~~~~~~~~~-----~~~~~ 352 (515)
+-+.+..+..|.-.-..+.+.|||+.|+.+- .+.++...|..+|+.+..... .-++.
T Consensus 87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiR 166 (305)
T PF07433_consen 87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIR 166 (305)
T ss_pred CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccccee
Confidence 6677888888887788899999998777653 234566778888888776433 23588
Q ss_pred EEEECCCCCEEEEEECCCc-------EEEEEeecCCCCCceeeec----CCCCCcCeEEEEEcCCCCEEEEEE-CCCcEE
Q psy6127 353 IAAYDPEGLAFAIGVNSDS-------IKLYDVRSYDKGPFASFKC----PGERGCEWTGLKFSPDGKLILVST-NGSIIR 420 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~~dg~-------i~i~d~~~~~~~~~~~~~~----~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~ 420 (515)
.++++++|..++..-..|. +-+++.... ...+.. ...-...+-+|++++++.++++++ ..+.+.
T Consensus 167 HLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~----~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~ 242 (305)
T PF07433_consen 167 HLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGA----LRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVA 242 (305)
T ss_pred eEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCc----ceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEE
Confidence 8999999877666543332 233332221 111111 112345678999999999887665 678899
Q ss_pred EEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcE
Q psy6127 421 LFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQV 464 (515)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I 464 (515)
+||..++..+....... +..++-.+++ ++++.+ .|.+
T Consensus 243 ~~d~~tg~~~~~~~l~D-----~cGva~~~~~-f~~ssG-~G~~ 279 (305)
T PF07433_consen 243 VWDAATGRLLGSVPLPD-----ACGVAPTDDG-FLVSSG-QGQL 279 (305)
T ss_pred EEECCCCCEeeccccCc-----eeeeeecCCc-eEEeCC-CccE
Confidence 99999999877665322 4566666666 555544 4443
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.2e-09 Score=66.60 Aligned_cols=39 Identities=36% Similarity=0.629 Sum_probs=37.5
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYD 249 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd 249 (515)
|++++++++|.+.|++++|+|++++|++|+.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 578899999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.3e-08 Score=92.25 Aligned_cols=164 Identities=15% Similarity=0.161 Sum_probs=117.1
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC----eEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 310 VSSLNLSPVDDSFISGSYDKTVRVWDLRQPN----NVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
...+..+|.++++|.+..+....+++.+... .............+.+..+......+..-|.++-+|+-+...
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~--- 141 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS--- 141 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccc---
Confidence 4455667788888888888887777765543 333344455566677777777777766666666666554221
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
......-+|-+.++.++|+||+++|+++..|..|++-.......+..+.. +|...|..++.-++ ..|++||.|++++
T Consensus 142 ~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfcl--GH~eFVS~isl~~~-~~LlS~sGD~tlr 218 (390)
T KOG3914|consen 142 GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCL--GHKEFVSTISLTDN-YLLLSGSGDKTLR 218 (390)
T ss_pred cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhcc--ccHhheeeeeeccC-ceeeecCCCCcEE
Confidence 12223347888899999999999999999999999988776655555542 24444788888764 5589999999999
Q ss_pred EEECCCCeEEEEEc
Q psy6127 466 IWNAERGYKVCVLD 479 (515)
Q Consensus 466 iwd~~~~~~~~~~~ 479 (515)
+||+.+|+++..+.
T Consensus 219 ~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 219 LWDITSGKLLDTCD 232 (390)
T ss_pred EEecccCCcccccc
Confidence 99999998887654
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.9e-08 Score=92.14 Aligned_cols=256 Identities=21% Similarity=0.215 Sum_probs=170.4
Q ss_pred eeeeCCCCcEEEEcccee-eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeeeeEecCC--CCce
Q psy6127 191 LAHSRSSRTITKCSENLV-RSYRVAKVFRENTDKINSLDYSSDGSLLISCSD-DDQIIIYDCEQGTSKNTINSK--KYGV 266 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~-~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~--~~~v 266 (515)
+..+++-|+..+-|...- ..-+.+..++.|...|.+++.+-|+..+.|.+. |..++++|+++-..+.-++.. .+.+
T Consensus 22 fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a 101 (558)
T KOG0882|consen 22 FIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFA 101 (558)
T ss_pred eEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCce
Confidence 334777888889997543 445667788999999999999999999999887 999999999876554333322 1222
Q ss_pred eEEEEecCCCeEEEEEeeCCCeEEEEECCCCe-e-eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE
Q psy6127 267 DLIKFTHSKTTAIHASTKVDATLRYLSLHDNK-Y-VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM 344 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~-~-~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 344 (515)
..+.-..+...++.++.-.++.+.++|-.... + ...-.-|..+|..+.++|.+..+++....|.|.-|.... .
T Consensus 102 ~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~-----~ 176 (558)
T KOG0882|consen 102 EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG-----P 176 (558)
T ss_pred EEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCC-----c
Confidence 22111112223444554578999999965443 2 233355999999999999999999999999999998763 0
Q ss_pred EecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 345 IQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 345 ~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
++.. -..+.|.+..... +|.. ........++.|+|+|..+.+-+.|..|++++.
T Consensus 177 ~qfP--r~~l~~~~K~eTd----------Ly~f--------------~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~ 230 (558)
T KOG0882|consen 177 FQFP--RTNLNFELKHETD----------LYGF--------------PKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVF 230 (558)
T ss_pred ccCc--cccccccccccch----------hhcc--------------cccccCccceEEccccCcccccCcccEEEEEEe
Confidence 1111 1112222211111 1111 111223457888888888888888888888888
Q ss_pred CCCceeEEeeccc------------------------------cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 425 FNGNCVQSLSGVL------------------------------NNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 425 ~~~~~~~~~~~~~------------------------------~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
++|+.++.+.... .....-+.+.|...|++|+-|+-=| |++.++.++.+
T Consensus 231 KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v 309 (558)
T KOG0882|consen 231 KTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTV 309 (558)
T ss_pred ccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeE
Confidence 8877655443210 0111235678999999999998777 99999999988
Q ss_pred EEEE
Q psy6127 475 VCVL 478 (515)
Q Consensus 475 ~~~~ 478 (515)
.+.+
T Consensus 310 ~ri~ 313 (558)
T KOG0882|consen 310 VRIL 313 (558)
T ss_pred EEEe
Confidence 7765
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.7e-09 Score=94.34 Aligned_cols=168 Identities=17% Similarity=0.206 Sum_probs=128.0
Q ss_pred EEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEE
Q psy6127 323 ISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLK 402 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~ 402 (515)
++.+.+..|-+-|+++|... .+...+.|.+..|...++++..|..+|.|..+|++............ -.|.+.|+++.
T Consensus 228 fs~G~sqqv~L~nvetg~~q-sf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r-lyh~Ssvtslq 305 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQ-SFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR-LYHDSSVTSLQ 305 (425)
T ss_pred ecccccceeEEEEeeccccc-ccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE-EEcCcchhhhh
Confidence 55667788899999887543 33455568888899899999999999999999999864333222222 24667788877
Q ss_pred EcC-CCCEEEEEECCCcEEEEECCCCce---eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 403 FSP-DGKLILVSTNGSIIRLFDAFNGNC---VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 403 ~sp-~~~~l~~~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
.-. ++++|++.+.+|+|++||.+.-++ +..+++|.+...+ .-+-..+....++++++|...|||.++.|.++.++
T Consensus 306 ~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~-l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 306 ILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAY-LPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI 384 (425)
T ss_pred hhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccc-cccccccccceEEEccCeeEEEEEecccCceeecc
Confidence 766 778999999999999999998777 8888888765543 33455677788899999999999999999999988
Q ss_pred cCC---CCCCeEEEEECC
Q psy6127 479 DGD---HPSAVQSLQFNP 493 (515)
Q Consensus 479 ~~~---h~~~V~~l~~sp 493 (515)
+-. ....+.+++|..
T Consensus 385 pf~~s~~e~d~~sv~~~s 402 (425)
T KOG2695|consen 385 PFPYSASEVDIPSVAFDS 402 (425)
T ss_pred CCCCccccccccceehhc
Confidence 742 223466677755
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.5e-06 Score=87.05 Aligned_cols=236 Identities=10% Similarity=0.022 Sum_probs=143.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCC-ce-e-----EEE--EecCCCeEEEEEeeCCCeEEEEECCCCeeeEE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY-GV-D-----LIK--FTHSKTTAIHASTKVDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~-~v-~-----~~~--~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~ 302 (515)
.+..+++++.+|.+.-+|.++|+.+........ .. . .+. -.-.+..+++++ .++.++.+|.++|+.+..
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~--~~g~l~ald~~tG~~~W~ 145 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGS--EKGQVYALNAEDGEVAWQ 145 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEc--CCCEEEEEECCCCCCccc
Confidence 355778888889999999999998877654321 00 0 000 011244555543 689999999999998877
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEE--EECC--CCCEEEEEECCCcEEEEEee
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIA--AYDP--EGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~s~--~~~~l~~g~~dg~i~i~d~~ 378 (515)
.........+.... +..++.++.++.+..+|.++|+.+.......+.... .-+| .+..++.++.+|.+..+|..
T Consensus 146 ~~~~~~~~ssP~v~--~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~ 223 (394)
T PRK11138 146 TKVAGEALSRPVVS--DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLME 223 (394)
T ss_pred ccCCCceecCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEcc
Confidence 65432211112222 456777888999999999999988777543211100 0112 23456777788999988888
Q ss_pred cCCCCCceeeecCCCCC--cCeEEEEEcC--CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCE
Q psy6127 379 SYDKGPFASFKCPGERG--CEWTGLKFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQF 454 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~--~~i~~l~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 454 (515)
+++..-........... .....+.-+| .+..+++++.+|.+..+|..+|+.+-.... .. ...+. ..+..
T Consensus 224 ~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~--~~---~~~~~--~~~~~ 296 (394)
T PRK11138 224 QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREY--GS---VNDFA--VDGGR 296 (394)
T ss_pred CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecC--CC---ccCcE--EECCE
Confidence 76532111111100000 0011111222 345677788899999999999987654431 11 11222 24667
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 455 VASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 455 l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
++.++.+|.+..+|..+|+.+-..
T Consensus 297 vy~~~~~g~l~ald~~tG~~~W~~ 320 (394)
T PRK11138 297 IYLVDQNDRVYALDTRGGVELWSQ 320 (394)
T ss_pred EEEEcCCCeEEEEECCCCcEEEcc
Confidence 888889999999999999876544
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.1e-06 Score=75.46 Aligned_cols=208 Identities=13% Similarity=0.117 Sum_probs=132.8
Q ss_pred EEEecCCCeEEEEEeeCCCeEEEEECCCC--eeeEEe---cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE
Q psy6127 269 IKFTHSKTTAIHASTKVDATLRYLSLHDN--KYVRYF---PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 269 ~~~~~~~~~l~~~s~~~d~~v~vwd~~~~--~~~~~~---~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 343 (515)
++.+.+|+.+++.. |..|.+-..+.. ..+.+. +...-.=..++|+||+..||.+...|+|+++|+...+. .
T Consensus 3 ~~~~~~Gk~lAi~q---d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l-f 78 (282)
T PF15492_consen 3 LALSSDGKLLAILQ---DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL-F 78 (282)
T ss_pred eeecCCCcEEEEEe---ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee-E
Confidence 45567777776664 777776654432 122222 22223457799999999999999999999999875433 2
Q ss_pred EEe--------cCCCeeEEEECCC------CCEEEEEECCCcEEEEEeecCCC---CCceeeecCCCCCcCeEEEEEcCC
Q psy6127 344 MIQ--------LSGNKPIAAYDPE------GLAFAIGVNSDSIKLYDVRSYDK---GPFASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 344 ~~~--------~~~~~~~~~~s~~------~~~l~~g~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
.+. ....+..+.|-+. ...|++-..+|.++-|-+..+.. .....+.........|.++.++|.
T Consensus 79 ~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~ 158 (282)
T PF15492_consen 79 VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPK 158 (282)
T ss_pred EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCC
Confidence 331 1122444444332 22466666788888887754322 222334445566778999999999
Q ss_pred CCEEEEEECC----C-------cEEEEECCCCceeEE--------------------------eeccccCCCCCEEEEEe
Q psy6127 407 GKLILVSTNG----S-------IIRLFDAFNGNCVQS--------------------------LSGVLNNNASPLEATFT 449 (515)
Q Consensus 407 ~~~l~~~s~d----g-------~i~iwd~~~~~~~~~--------------------------~~~~~~~~~~i~~~~~s 449 (515)
.+.|++|+.. + -+.-|.+-++.+-.. +.........|..+..|
T Consensus 159 h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlS 238 (282)
T PF15492_consen 159 HRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLS 238 (282)
T ss_pred CCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEEC
Confidence 8888877631 1 255666533221110 01112234458999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
|||+.||+...+|.|.+|++.+-++......
T Consensus 239 Pdg~~La~ih~sG~lsLW~iPsL~~~~~W~~ 269 (282)
T PF15492_consen 239 PDGSLLACIHFSGSLSLWEIPSLRLQRSWKQ 269 (282)
T ss_pred CCCCEEEEEEcCCeEEEEecCcchhhcccch
Confidence 9999999999999999999998877766543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-05 Score=74.58 Aligned_cols=237 Identities=13% Similarity=0.129 Sum_probs=148.9
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe--EEEEEcCCCCEEEEEeC-----CCcEEEEEcC-
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV--SSLNLSPVDDSFISGSY-----DKTVRVWDLR- 337 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v--~~l~~~~~~~~l~s~s~-----dg~i~iwd~~- 337 (515)
...++.+|.....++..---.....+||..+++....+....+.- =.-.|++||++|++.-. .|.|-|||..
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 345677886555554442233457889999998877664433222 13689999999998644 4789999999
Q ss_pred CCCeEEEEecCC-CeeEEEECCCCCEEEEEEC-------CC-----------cEEEEEeecCCCCCceeeec-CCCCCcC
Q psy6127 338 QPNNVGMIQLSG-NKPIAAYDPEGLAFAIGVN-------SD-----------SIKLYDVRSYDKGPFASFKC-PGERGCE 397 (515)
Q Consensus 338 ~~~~~~~~~~~~-~~~~~~~s~~~~~l~~g~~-------dg-----------~i~i~d~~~~~~~~~~~~~~-~~~~~~~ 397 (515)
+.+.+..+...+ ....+.+.|||+.|+++-. .| .+...|..+++. ...... ...+...
T Consensus 87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~l--l~q~~Lp~~~~~lS 164 (305)
T PF07433_consen 87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGAL--LEQVELPPDLHQLS 164 (305)
T ss_pred CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCce--eeeeecCccccccc
Confidence 556666775443 3456889999988877521 12 333444444331 111111 1446668
Q ss_pred eEEEEEcCCCCEEEEEECCCc-------EEEEECCCCceeEEeecc----ccCCCCCEEEEEecCCCEEEEEe-CCCcEE
Q psy6127 398 WTGLKFSPDGKLILVSTNGSI-------IRLFDAFNGNCVQSLSGV----LNNNASPLEATFTPDSQFVASGS-TDGQVH 465 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg~-------i~iwd~~~~~~~~~~~~~----~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~ 465 (515)
++.+++.++|..++..-..|. +.+++ .++.+..+... ..-...+-++++++++.++++.+ ..|.+.
T Consensus 165 iRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~ 242 (305)
T PF07433_consen 165 IRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVA 242 (305)
T ss_pred eeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEE
Confidence 999999999876655433332 33443 33333333221 12234588999999998886665 667899
Q ss_pred EEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 466 iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
+||..+++.+....- ..+..++-.+++ +++ +++...++.+.
T Consensus 243 ~~d~~tg~~~~~~~l---~D~cGva~~~~~-f~~-ssG~G~~~~~~ 283 (305)
T PF07433_consen 243 VWDAATGRLLGSVPL---PDACGVAPTDDG-FLV-SSGQGQLIRLS 283 (305)
T ss_pred EEECCCCCEeecccc---CceeeeeecCCc-eEE-eCCCccEEEcc
Confidence 999999999987754 457788888887 333 44444455443
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-06 Score=80.15 Aligned_cols=187 Identities=14% Similarity=0.105 Sum_probs=122.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe-cCCC---
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF-PGHV--- 307 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~-~~h~--- 307 (515)
++..+++++.++.+..||..+|+.+....... .+.... ...+..+++++ .++.++.+|..+|+.+... ....
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~-~~~~~~-~~~~~~v~v~~--~~~~l~~~d~~tG~~~W~~~~~~~~~~ 110 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPG-PISGAP-VVDGGRVYVGT--SDGSLYALDAKTGKVLWSIYLTSSPPA 110 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSS-CGGSGE-EEETTEEEEEE--TTSEEEEEETTTSCEEEEEEE-SSCTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccc-ccccee-eeccccccccc--ceeeeEecccCCcceeeeecccccccc
Confidence 56678888899999999999999988877532 222212 33455666665 5889999999999998773 3221
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCe-----------eEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 308 RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK-----------PIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 308 ~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
..........++..++.+..++.|..+|+++|+.+.......+. ..-....++ .+..+..++.+.-+|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d 189 (238)
T PF13360_consen 111 GVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVD 189 (238)
T ss_dssp STB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEE
T ss_pred ccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEE
Confidence 11222333333888899998999999999999998877553311 122222344 666666777533338
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ 431 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~ 431 (515)
+.+++. ..... . ..... ...+++..+++++.++.+..||+++|+..-
T Consensus 190 ~~tg~~----~w~~~--~-~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W 236 (238)
T PF13360_consen 190 LATGEK----LWSKP--I-SGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGKVVW 236 (238)
T ss_dssp TTTTEE----EEEEC--S-S-ECE-CEECCCTEEEEEETTTEEEEEETTTTEEEE
T ss_pred CCCCCE----EEEec--C-CCccC-CceeeCCEEEEEeCCCEEEEEECCCCCEEe
Confidence 887651 11111 1 11212 245677888888899999999999998654
|
... |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.9e-08 Score=90.16 Aligned_cols=246 Identities=16% Similarity=0.136 Sum_probs=170.2
Q ss_pred CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC---CeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcC
Q psy6127 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD---NKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLR 337 (515)
Q Consensus 262 ~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~ 337 (515)
|...|+.+.... .+.++.+ +.||.++.|.-.. -+.+..+..|-..|.+++.+-++.++.|.+. |..++++|++
T Consensus 8 hrd~i~hv~~tk-a~fiiqA--SlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvE 84 (558)
T KOG0882|consen 8 HRDVITHVFPTK-AKFIIQA--SLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVE 84 (558)
T ss_pred ccceeeeEeeeh-hheEEee--ecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEee
Confidence 555555554433 3344444 4899999998543 2445566788999999999999999999887 9999999999
Q ss_pred CCCeEEEEecCCCeeEEEECCCCC----EEEEE-ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEE
Q psy6127 338 QPNNVGMIQLSGNKPIAAYDPEGL----AFAIG-VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILV 412 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~s~~~~----~l~~g-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~ 412 (515)
+-..+..+....-...+.|..... .++++ ..++.+.++|-.....+ .....+.|..+|..+.++|.+..+++
T Consensus 85 n~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q---~~~fkklH~sPV~~i~y~qa~Ds~vS 161 (558)
T KOG0882|consen 85 NFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQ---DGYFKKLHFSPVKKIRYNQAGDSAVS 161 (558)
T ss_pred ccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCc---cceecccccCceEEEEeeccccceee
Confidence 877665554443333333332222 34433 46889999997764322 23334678889999999999999999
Q ss_pred EECCCcEEEEECCC-Ccee-----EE------eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 413 STNGSIIRLFDAFN-GNCV-----QS------LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 413 ~s~dg~i~iwd~~~-~~~~-----~~------~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
....|.|.-|.... .+.. .. +.+.........++.|+|+|..+.+-+.|..|++++.++|+.++.+..
T Consensus 162 iD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 162 IDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred ccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhc
Confidence 99999999998762 1111 11 111222334578999999999999999999999999999876654421
Q ss_pred -------------------------------CCC-CCeEEEEECCCCCEEEEeeCC-EEEEcCCCC
Q psy6127 481 -------------------------------DHP-SAVQSLQFNPKYHMLASACSN-MAFWIPTLS 513 (515)
Q Consensus 481 -------------------------------~h~-~~V~~l~~sp~~~~las~~~d-v~iW~~~~~ 513 (515)
.|. ..-+.+.|...+++|..++-- +++.+++..
T Consensus 242 ~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~gikvin~~tn 307 (558)
T KOG0882|consen 242 VLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILGIKVINLDTN 307 (558)
T ss_pred cchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecceeEEEEEeecC
Confidence 022 233567888899999888743 777766543
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.3e-06 Score=81.64 Aligned_cols=260 Identities=11% Similarity=0.094 Sum_probs=157.7
Q ss_pred EEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-EEE
Q psy6127 245 IIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFI 323 (515)
Q Consensus 245 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~ 323 (515)
++..+..+.+....+.++...|..++|+|....++... +.+..|++.|+++...+..+..| ..+++++|.-|.. +|+
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~a-sl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IY 252 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLA-SLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIY 252 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeee-ccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeE
Confidence 66777666666667788889999999999988655443 57999999999999999999888 8899999988765 788
Q ss_pred EEeCCCcEEEEEcCCCCeEEE-Eec---CCCeeEE------EECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC
Q psy6127 324 SGSYDKTVRVWDLRQPNNVGM-IQL---SGNKPIA------AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE 393 (515)
Q Consensus 324 s~s~dg~i~iwd~~~~~~~~~-~~~---~~~~~~~------~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~ 393 (515)
.|-..|.|.+||++..+.... +.. ..++..+ ...+.|.+++..+.+ ...|++.......... ....
T Consensus 253 aGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~v--lele 328 (463)
T KOG1645|consen 253 AGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCV--LELE 328 (463)
T ss_pred EeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcc--cccC
Confidence 888899999999997654322 111 1112222 223344455544332 4455554322211111 1122
Q ss_pred CCcCeEEEEEcCCCCEEEEEECCC-------cEE-EEECCCCceeEEee-ccccCC----CCCEEEEEecCCCEEEE-Ee
Q psy6127 394 RGCEWTGLKFSPDGKLILVSTNGS-------IIR-LFDAFNGNCVQSLS-GVLNNN----ASPLEATFTPDSQFVAS-GS 459 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s~dg-------~i~-iwd~~~~~~~~~~~-~~~~~~----~~i~~~~~sp~g~~l~s-gs 459 (515)
..+...++...+-.+.++...... .+- --|..+|.++.... ++.+.. ..-..+.-.++.++++. |.
T Consensus 329 ~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd 408 (463)
T KOG1645|consen 329 PPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGD 408 (463)
T ss_pred CCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecC
Confidence 334455666666555555443221 011 11223343332211 110100 00111222345555544 44
Q ss_pred CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC--CCCEEEEeeCC-EEEEcCCC
Q psy6127 460 TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP--KYHMLASACSN-MAFWIPTL 512 (515)
Q Consensus 460 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--~~~~las~~~d-v~iW~~~~ 512 (515)
..+.+.+||..+++.+.++.- ..+|.+++... .+.+|+.-..+ ++|+..+.
T Consensus 409 ~tn~lil~D~~s~evvQ~l~~--~epv~Dicp~~~n~~syLa~LTd~~v~Iyk~es 462 (463)
T KOG1645|consen 409 STNELILQDPHSFEVVQTLAL--SEPVLDICPNDTNGSSYLALLTDDRVHIYKNES 462 (463)
T ss_pred CcceeEEeccchhheeeeccc--CcceeecceeecCCcchhhheecceEEEEecCC
Confidence 567899999999999999974 57898888765 34577776665 88887654
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1e-07 Score=89.01 Aligned_cols=156 Identities=18% Similarity=0.309 Sum_probs=107.2
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC---cEEEEECCCC
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS---IIRLFDAFNG 427 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg---~i~iwd~~~~ 427 (515)
...+..++.++++|++..+....+++.+...+. .+..... .-....+++.|..+......+..-| .+.+|....+
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~-~kl~~~~-~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~ 142 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKG-AKLLDVS-CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG 142 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCc-ceeeeEe-ecccCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence 344667888999999988888888888875431 1111111 1112233555555555555554444 4455555444
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--E
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--M 505 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v 505 (515)
.+. .+-+ |..-+..++|+||+++++++..|..|+|-....-..+..+.-+|..-|..++.-++.. |++++|| +
T Consensus 143 ~~~-~~lG---hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~-LlS~sGD~tl 217 (390)
T KOG3914|consen 143 RCE-PILG---HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYL-LLSGSGDKTL 217 (390)
T ss_pred Ccc-hhhh---hhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCce-eeecCCCCcE
Confidence 433 3333 4445899999999999999999999999888777777666656999999999988755 7777766 9
Q ss_pred EEEcCCCC
Q psy6127 506 AFWIPTLS 513 (515)
Q Consensus 506 ~iW~~~~~ 513 (515)
++||+..+
T Consensus 218 r~Wd~~sg 225 (390)
T KOG3914|consen 218 RLWDITSG 225 (390)
T ss_pred EEEecccC
Confidence 99999765
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.5e-07 Score=96.14 Aligned_cols=185 Identities=18% Similarity=0.304 Sum_probs=143.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS 311 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~ 311 (515)
++..++.|+-...+..+|+.+.+..+........|.-++.+ +..++ +|+..|+|.+-|..+.+.++++..|++.|.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~N--nr~lf--~G~t~G~V~LrD~~s~~~iht~~aHs~siS 221 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYN--NRNLF--CGDTRGTVFLRDPNSFETIHTFDAHSGSIS 221 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEec--CcEEE--eecccceEEeecCCcCceeeeeecccccee
Confidence 34567778877888899999988888777666666666653 33333 335799999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeC---------CCcEEEEEcCCCCeEEEEecCCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCC
Q psy6127 312 SLNLSPVDDSFISGSY---------DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
++... |+.|+++|. |..|++||++..+.+.-++.+....-+.|.|. ...+++.+..|...+-|..+..
T Consensus 222 DfDv~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~ls 299 (1118)
T KOG1275|consen 222 DFDVQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLS 299 (1118)
T ss_pred eeecc--CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccC
Confidence 88777 899999875 66799999999887777766665677788885 4568888999999999955443
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
..+... .........+.++++|++++.++.|..+|.|.+|.
T Consensus 300 NP~~~~-~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 300 NPPAGV-KMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CCccce-eEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 322222 22233444588999999999999999999999997
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.1e-09 Score=106.12 Aligned_cols=222 Identities=15% Similarity=0.160 Sum_probs=158.2
Q ss_pred eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC--cEE
Q psy6127 255 SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK--TVR 332 (515)
Q Consensus 255 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg--~i~ 332 (515)
..++++.|....+|++|+.+.+++++++ ..|.|+++++.+|.......+|.++|+.+.-+.+|..+++.+.-. -..
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~--~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGS--HAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeee--ccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHH
Confidence 4455777888999999999999998887 699999999999999999999999999999999999766654433 467
Q ss_pred EEEcCC-CCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 333 VWDLRQ-PNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 333 iwd~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
+|++.+ +.....+ ....++.|+..-..-+.|+......+||+++....... +.-.......-+...|+|+...++
T Consensus 1171 LW~~~s~~~~~Hsf---~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ty-lt~~~~~~y~~n~a~FsP~D~LIl 1246 (1516)
T KOG1832|consen 1171 LWDASSTGGPRHSF---DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTY-LTDTVTSSYSNNLAHFSPCDTLIL 1246 (1516)
T ss_pred HhccccccCccccc---cccceeehhhhHHHHHhcccccceEEEecccCcHHHHh-cCcchhhhhhccccccCCCcceEe
Confidence 899865 2222222 23556788877666667777788999999986521110 110111111225788999988776
Q ss_pred EEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEE
Q psy6127 412 VSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQF 491 (515)
Q Consensus 412 ~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 491 (515)
.|| .+||++..+.++.+...... ..-.|+|.|.-++.-++ |||+++.+.++..+. -.-..+.|
T Consensus 1247 ---ndG--vLWDvR~~~aIh~FD~ft~~----~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~---Ldqc~VtF 1309 (1516)
T KOG1832|consen 1247 ---NDG--VLWDVRIPEAIHRFDQFTDY----GGGGFHPSGNEVIINSE-----IWDMRTFKLLHSVPS---LDQCAVTF 1309 (1516)
T ss_pred ---eCc--eeeeeccHHHHhhhhhheec----ccccccCCCceEEeech-----hhhhHHHHHHhcCcc---ccceEEEe
Confidence 455 48999988877777654432 34569999998887653 899999888776653 12346677
Q ss_pred CCCCCEEE
Q psy6127 492 NPKYHMLA 499 (515)
Q Consensus 492 sp~~~~la 499 (515)
+..|.++.
T Consensus 1310 NstG~VmY 1317 (1516)
T KOG1832|consen 1310 NSTGDVMY 1317 (1516)
T ss_pred ccCccchh
Confidence 77766544
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.9e-05 Score=74.32 Aligned_cols=247 Identities=12% Similarity=0.089 Sum_probs=157.6
Q ss_pred EEEcCCCCEEEEEeC----------CCeEEEEECCCCeeeeEecCCC-------CceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 227 LDYSSDGSLLISCSD----------DDQIIIYDCEQGTSKNTINSKK-------YGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 227 l~~spd~~~lasgs~----------dg~i~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
+..+||++.+++++. .-.|.+||.++-.....+.-.. ......+++.+++++++...+-..+|
T Consensus 41 ~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SV 120 (342)
T PF06433_consen 41 VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSV 120 (342)
T ss_dssp EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEE
T ss_pred eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeE
Confidence 567899999887542 3469999999988777553322 12345688999999998877778899
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCCeEEEE-e--cC--CC-eeEEEECCCCCE
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR-QPNNVGMI-Q--LS--GN-KPIAAYDPEGLA 362 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~-~--~~--~~-~~~~~~s~~~~~ 362 (515)
.|.|+..++.+..+.- .+ +..+--++ ++.|.+-|.||++.-..+. .|+..... . .. .+ ...-+++..+..
T Consensus 121 tVVDl~~~kvv~ei~~-PG-C~~iyP~~-~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~ 197 (342)
T PF06433_consen 121 TVVDLAAKKVVGEIDT-PG-CWLIYPSG-NRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGR 197 (342)
T ss_dssp EEEETTTTEEEEEEEG-TS-EEEEEEEE-TTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTE
T ss_pred EEEECCCCceeeeecC-CC-EEEEEecC-CCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCe
Confidence 9999999998877642 12 22222222 2468889999999999888 45544222 1 11 11 122344455666
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeecCC-------CCCcCeEEEEEcCCCCEEEEEEC---CC-------cEEEEECC
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKCPG-------ERGCEWTGLKFSPDGKLILVSTN---GS-------IIRLFDAF 425 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~-------~~~~~i~~l~~sp~~~~l~~~s~---dg-------~i~iwd~~ 425 (515)
++.-+.+|.|+-.|+............... -..+...-+++++..+.|++.-. ++ .|.++|+.
T Consensus 198 ~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~ 277 (342)
T PF06433_consen 198 LYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLK 277 (342)
T ss_dssp EEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETT
T ss_pred EEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECC
Confidence 776788999998888764422222222111 11123345888887666665331 11 48889999
Q ss_pred CCceeEEeeccccCCCCCEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeEEEEEcC
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASGS-TDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs-~dg~I~iwd~~~~~~~~~~~~ 480 (515)
+++.+..+..... +.++..+.+.+ +|++.+ .++.+.+||..+|+.+.++..
T Consensus 278 t~krv~Ri~l~~~----~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 278 THKRVARIPLEHP----IDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp TTEEEEEEEEEEE----ESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred CCeEEEEEeCCCc----cceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 9999998875332 66899998876 665544 578999999999999999875
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.3e-08 Score=98.58 Aligned_cols=210 Identities=14% Similarity=0.194 Sum_probs=142.6
Q ss_pred eeccccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCe-eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 215 KVFRENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQGT-SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
..+.||+..|+.+.|+|.. ..+|+++.|-.+..||+.+.. ++.....-......++|+.....++..+ ..+.|.+|
T Consensus 108 f~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlass--hg~~i~vw 185 (1081)
T KOG0309|consen 108 FVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASS--HGNDIFVW 185 (1081)
T ss_pred EEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhc--cCCceEEE
Confidence 4578999999999999954 689999999999999998643 4444555556678899997766655443 67889999
Q ss_pred ECCCC-eeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCe--EEEEecCCCeeEEEECCCCCEEEEEE-
Q psy6127 293 SLHDN-KYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNN--VGMIQLSGNKPIAAYDPEGLAFAIGV- 367 (515)
Q Consensus 293 d~~~~-~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~- 367 (515)
|.+.| .++..+++|...|..++|+.-. ..+.+++.|++|+.||...... ........++.--.+-|-|.-.++--
T Consensus 186 d~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~ 265 (1081)
T KOG0309|consen 186 DLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPM 265 (1081)
T ss_pred eccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccc
Confidence 99876 5678889999999999997532 3688999999999999875433 33344445555566666444333221
Q ss_pred -CCCcEEEEEeecCCCC-----CceeeecCCCCCcCeEEEEEcCC--------C--CEEEEEECCCcEEEEECCC
Q psy6127 368 -NSDSIKLYDVRSYDKG-----PFASFKCPGERGCEWTGLKFSPD--------G--KLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 368 -~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~~i~~l~~sp~--------~--~~l~~~s~dg~i~iwd~~~ 426 (515)
.+..+.+++.++.... ....+....+|...|...-|-.. . -.|++=+.|.++++|-+.+
T Consensus 266 ~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 266 VGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred cCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 2224444444332211 11234444566665554444321 1 2588999999999998754
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.9e-07 Score=80.37 Aligned_cols=195 Identities=14% Similarity=0.156 Sum_probs=110.7
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee------------eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK------------NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
|+.+.++.+ ..|+++..++.+......++.+. +.+..|.++-.+-+.+-.++.++++ ..||.+.+
T Consensus 39 ~~~~~~v~~-~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~--~~dg~~~v 115 (319)
T KOG4714|consen 39 LSKVSLSAE-YILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIG--YADGSLAV 115 (319)
T ss_pred EEEeechhh-heeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEec--CCCceEEE
Confidence 555555543 34566666655555544333222 2222333222222233334444444 47999999
Q ss_pred EECCCCeee-EEec-CCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCC-CE
Q psy6127 292 LSLHDNKYV-RYFP-GHVRKVSSLNLSPVDDSFISGSY-----DKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEG-LA 362 (515)
Q Consensus 292 wd~~~~~~~-~~~~-~h~~~v~~l~~~~~~~~l~s~s~-----dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~-~~ 362 (515)
++.+.-..+ +... .|.+. .+.+....++.+.++.. -+..+.|+++..+....- .....+.+++-+|.. +.
T Consensus 116 ~s~~~~~~~~~~i~~~~~~~-as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~ 194 (319)
T KOG4714|consen 116 FSTDKDLALMSRIPSIHSGS-ASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHL 194 (319)
T ss_pred EechHHHhhhhhcccccccc-cccceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccE
Confidence 987652111 1111 11111 11222223444444321 234556666544332211 222338888888854 56
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCC
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~ 426 (515)
+++|+.||.+.+||.+... ........|..++..+.|+| ++..|+++++||.+..||..+
T Consensus 195 v~cgt~dg~~~l~d~rn~~----~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 195 VCCGTDDGIVGLWDARNVA----MPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred EEEecCCCeEEEEEccccc----chHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 7788899999999999863 23344567888999999999 677999999999999999764
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.8e-06 Score=82.17 Aligned_cols=179 Identities=17% Similarity=0.104 Sum_probs=114.3
Q ss_pred EcCCCCEEEEE-eCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-------------------------
Q psy6127 315 LSPVDDSFISG-SYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN------------------------- 368 (515)
Q Consensus 315 ~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~------------------------- 368 (515)
+.|||+.+... -..+.+.+.|.++.+....+...+....+.++|+|+++++.+.
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~ 279 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIA 279 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchH
Confidence 34566544322 2346678889888888777777776778899999998877751
Q ss_pred ---------------CCcEEEEEeecC---CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCce
Q psy6127 369 ---------------SDSIKLYDVRSY---DKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNC 429 (515)
Q Consensus 369 ---------------dg~i~i~d~~~~---~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~ 429 (515)
++.|.+.|.++. .......+. -......+.++|||+++++++ .+.++.+.|+.+.+.
T Consensus 280 ~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIP----VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~ 355 (635)
T PRK02888 280 RIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVP----VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD 355 (635)
T ss_pred HHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEE----CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence 133555555540 001111111 122344799999999988776 488999999987552
Q ss_pred ------------eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC----------CeEEEEEcCCCCCCe-
Q psy6127 430 ------------VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER----------GYKVCVLDGDHPSAV- 486 (515)
Q Consensus 430 ------------~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~----------~~~~~~~~~~h~~~V- 486 (515)
..+.+. .......+|.++|....+-.-|..|..||+.+ ...+.++.- |-.+-
T Consensus 356 ~~~~~~~~~~~vvaevev----GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV-~y~pgh 430 (635)
T PRK02888 356 LFDGKIKPRDAVVAEPEL----GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDV-HYQPGH 430 (635)
T ss_pred hhhccCCccceEEEeecc----CCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccC-CCccce
Confidence 222222 12256789999999888888999999999876 334444443 32221
Q ss_pred ----EEEEECCCCCEEEEee
Q psy6127 487 ----QSLQFNPKYHMLASAC 502 (515)
Q Consensus 487 ----~~l~~sp~~~~las~~ 502 (515)
..=.-.|||++|++..
T Consensus 431 ~~~~~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 431 NHASMGETKEADGKWLVSLN 450 (635)
T ss_pred eeecCCCcCCCCCCEEEEcc
Confidence 1223367888888764
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-05 Score=85.77 Aligned_cols=240 Identities=16% Similarity=0.227 Sum_probs=142.4
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
..+.|.++.|-.++.-++.+..+|.|.+-|.++... .....-..+|.+++|+||+..++++++ .+++.+.+ .+..+
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~--~~tll~mT-~~f~~ 142 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITG--RQTLLFMT-KDFEP 142 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeC--CcEEEEEe-ccccc
Confidence 447899999999999999999999999998876543 223334578999999999999999983 56665543 22222
Q ss_pred eEEecCC-----CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe-EEEEecCCCeeEEEECCCCCEEEEEE-----C
Q psy6127 300 VRYFPGH-----VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN-VGMIQLSGNKPIAAYDPEGLAFAIGV-----N 368 (515)
Q Consensus 300 ~~~~~~h-----~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~g~-----~ 368 (515)
+....-+ .+..-.+-|-..... +-|+ .|..+..+....+. ......+..-+.++|--||.++++.. .
T Consensus 143 i~E~~L~~d~~~~sk~v~VGwGrkeTq-frgs-~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~ 220 (1265)
T KOG1920|consen 143 IAEKPLDADDERKSKFVNVGWGRKETQ-FRGS-EGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETG 220 (1265)
T ss_pred hhccccccccccccccceeccccccee-eecc-hhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCC
Confidence 2211111 111122222211111 1111 11111111111110 11112344467799999999999843 2
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE---CCCcEEEEECCCCceeEEeecccc-CCCCCE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST---NGSIIRLFDAFNGNCVQSLSGVLN-NNASPL 444 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s---~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~ 444 (515)
...|++||-+. ..... .......-.+++|-|.|..+++-. .|+.|.+|. ++|-.-..+..... ...++.
T Consensus 221 ~RkirV~drEg-~Lns~-----se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffE-rNGL~hg~f~l~~p~de~~ve 293 (1265)
T KOG1920|consen 221 TRKIRVYDREG-ALNST-----SEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFE-RNGLRHGEFVLPFPLDEKEVE 293 (1265)
T ss_pred ceeEEEecccc-hhhcc-----cCcccccccceeecCCCCeEeeeeecCCCCcEEEEe-cCCccccccccCCcccccchh
Confidence 37999999872 21111 111222234899999999998754 466799998 34433332222221 222388
Q ss_pred EEEEecCCCEEEE---EeCCCcEEEEECCCC
Q psy6127 445 EATFTPDSQFVAS---GSTDGQVHIWNAERG 472 (515)
Q Consensus 445 ~~~~sp~g~~l~s---gs~dg~I~iwd~~~~ 472 (515)
.++|+.++..||+ ......|++|-+.+-
T Consensus 294 ~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 294 ELAWNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred eeeecCCCCceeeeecccccceEEEEEecCe
Confidence 9999999999988 444556999988764
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.1e-07 Score=92.97 Aligned_cols=185 Identities=11% Similarity=0.078 Sum_probs=131.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 386 (515)
.+.++|++++ ++.|+-|+.+|.|++++....- ...+.+... +.+|.++++|+.||++.|..+-+.+....
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~- 108 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQ- 108 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCcccee-
Confidence 3557777777 7899999999999999976443 333333322 67899999999999999998887552211
Q ss_pred eeecCCCCCcCeEEEEEcCC-----CCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC
Q psy6127 387 SFKCPGERGCEWTGLKFSPD-----GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~-----~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d 461 (515)
.....++.+++++|+ .+.+++|+.-| +.++.-+-........ .....++|.++.|. |.++|-++++
T Consensus 109 -----~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~-l~~~eG~I~~i~W~--g~lIAWand~ 179 (846)
T KOG2066|consen 109 -----YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVV-LSEGEGPIHSIKWR--GNLIAWANDD 179 (846)
T ss_pred -----EecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcccee-eecCccceEEEEec--CcEEEEecCC
Confidence 233457889999998 56888999888 7777643211111222 22245669999997 8899999888
Q ss_pred CcEEEEECCCCeEEEEEcCCCCC-----CeEEEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 462 GQVHIWNAERGYKVCVLDGDHPS-----AVQSLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 462 g~I~iwd~~~~~~~~~~~~~h~~-----~V~~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
| |+|||+.+++.+..++..+.. .-..+.|.++.++++.=+.+++|..+.
T Consensus 180 G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~d~v~i~~I~ 233 (846)
T KOG2066|consen 180 G-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWGDSVKICSIK 233 (846)
T ss_pred C-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecCCeEEEEEEe
Confidence 8 999999999998888764422 134678888877666555668887765
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.8e-05 Score=70.87 Aligned_cols=278 Identities=11% Similarity=0.067 Sum_probs=143.5
Q ss_pred EEcCCCCEEEEEeC-C--CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec
Q psy6127 228 DYSSDGSLLISCSD-D--DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 228 ~~spd~~~lasgs~-d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~ 304 (515)
+|.+||+.|+.++. | ..+.+.|+.+++..+.-.+..........+|+.+.++..- ....++-.|+++.+....+.
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~--~~~~l~~vdL~T~e~~~vy~ 119 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVK--NGRSLRRVDLDTLEERVVYE 119 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEE--TTTEEEEEETTT--EEEEEE
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEE--CCCeEEEEECCcCcEEEEEE
Confidence 57889977766664 4 5677778888877665444333333566778888877764 46789999999988777776
Q ss_pred CCCCCeEEEEEc--CCCCEEEEEe----------------------CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCC
Q psy6127 305 GHVRKVSSLNLS--PVDDSFISGS----------------------YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG 360 (515)
Q Consensus 305 ~h~~~v~~l~~~--~~~~~l~s~s----------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~ 360 (515)
.....+-...|. .|+..++-.- ....|.-.|+.+|+....+....-...+.|+|..
T Consensus 120 ~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 120 VPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTD 199 (386)
T ss_dssp --TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTE
T ss_pred CCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCC
Confidence 666666555664 4455543321 1234666788888887777766667889999955
Q ss_pred CE-EEEEEC---CC-cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-----CCCcEEEEECCCCcee
Q psy6127 361 LA-FAIGVN---SD-SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-----NGSIIRLFDAFNGNCV 430 (515)
Q Consensus 361 ~~-l~~g~~---dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-----~dg~i~iwd~~~~~~~ 430 (515)
.. ++.|-+ +. .-|||-++....... .+.. ......+..=-|.|||..|.--+ .+..|.-+|..+++..
T Consensus 200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~-~v~~-~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~ 277 (386)
T PF14583_consen 200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVK-KVHR-RMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERR 277 (386)
T ss_dssp EEEEEEEE-S-TTTSS-SEEEEETTS---E-ESS----TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EE
T ss_pred CCEEEEeccCCcceeceEEEEEEcCCCcce-eeec-CCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCce
Confidence 44 444432 22 247888876433221 2211 12233455566899998776432 2345777888888654
Q ss_pred EEeeccccCCCCCEEEEEecCCCEEEEEeCCC----------------cEEEEECCCCeEEEEEcC-------CCCC--C
Q psy6127 431 QSLSGVLNNNASPLEATFTPDSQFVASGSTDG----------------QVHIWNAERGYKVCVLDG-------DHPS--A 485 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg----------------~I~iwd~~~~~~~~~~~~-------~h~~--~ 485 (515)
..... . .......++||++++-=+.|. -|++++++.+........ .+.. .
T Consensus 278 ~~~~~--p---~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~ 352 (386)
T PF14583_consen 278 RLMEM--P---WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVT 352 (386)
T ss_dssp EEEEE------SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT
T ss_pred EEEeC--C---ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccC
Confidence 32222 1 134566678898876533331 466788887764322210 0111 1
Q ss_pred eEEEEECCCCCEEEEee---CCEEEEcCCCCC
Q psy6127 486 VQSLQFNPKYHMLASAC---SNMAFWIPTLSA 514 (515)
Q Consensus 486 V~~l~~sp~~~~las~~---~dv~iW~~~~~~ 514 (515)
=-...|+||+++++-.| |...||-++.+.
T Consensus 353 hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~i~~ 384 (386)
T PF14583_consen 353 HPHPSFSPDGKWVLFRSDMEGPPAVYLVEIPD 384 (386)
T ss_dssp ----EE-TTSSEEEEEE-TTSS-EEEEEE--C
T ss_pred CCCCccCCCCCEEEEECCCCCCccEEEEeCcc
Confidence 24689999999988877 336666555543
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=60.45 Aligned_cols=39 Identities=46% Similarity=0.750 Sum_probs=36.9
Q ss_pred CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy6127 297 NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335 (515)
Q Consensus 297 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd 335 (515)
++++.++.+|.+.|++++|+|++++|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=86.17 Aligned_cols=162 Identities=12% Similarity=0.090 Sum_probs=118.5
Q ss_pred eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-----CeEEEEecCCCeeEEEECC
Q psy6127 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP-----NNVGMIQLSGNKPIAAYDP 358 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~s~ 358 (515)
+.+..|-+-|+++|... .|. ..+.|.++.|...++.+..|+..|.|..+|++.+ .+...+.++..++++..-.
T Consensus 231 G~sqqv~L~nvetg~~q-sf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq 308 (425)
T KOG2695|consen 231 GLSQQVLLTNVETGHQQ-SFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQ 308 (425)
T ss_pred cccceeEEEEeeccccc-ccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhc
Confidence 35888899998887543 233 5678999999998999999999999999999864 5677778888888877665
Q ss_pred -CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC--eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 359 -EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE--WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 359 -~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
++.+|.+.+.+|+|++||++..+... .+....+|... -.-+...+....+++++.|-..++|.++.|+.+.+++.
T Consensus 309 ~s~q~LmaS~M~gkikLyD~R~~K~~~--~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 309 FSQQKLMASDMTGKIKLYDLRATKCKK--SVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPF 386 (425)
T ss_pred cccceEeeccCcCceeEeeehhhhccc--ceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCC
Confidence 78899999999999999999754221 12222333221 12344556677888999999999999999999888765
Q ss_pred cccCCC-CCEEEEEe
Q psy6127 436 VLNNNA-SPLEATFT 449 (515)
Q Consensus 436 ~~~~~~-~i~~~~~s 449 (515)
...... .+.+++|.
T Consensus 387 ~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 387 PYSASEVDIPSVAFD 401 (425)
T ss_pred CCccccccccceehh
Confidence 433221 24455554
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.7e-06 Score=78.06 Aligned_cols=248 Identities=15% Similarity=0.125 Sum_probs=146.8
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
..+++..+.+.+|...|..++|||..+ ++..++.+.+|+|.|+++...+..+..+ ..+++++|.-+....+.++ ...
T Consensus 180 ~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaG-l~n 257 (463)
T KOG1645|consen 180 SHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAG-LQN 257 (463)
T ss_pred cCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEe-ccC
Confidence 344555667889999999999999776 7889999999999999999998888888 8899999999987776665 689
Q ss_pred CeEEEEECCCCee-eEEecC--CCCCeEEEEEc------CCCCEEEEEeCCCcEEEEEcCC----CCeEEEEecCCCeeE
Q psy6127 287 ATLRYLSLHDNKY-VRYFPG--HVRKVSSLNLS------PVDDSFISGSYDKTVRVWDLRQ----PNNVGMIQLSGNKPI 353 (515)
Q Consensus 287 ~~v~vwd~~~~~~-~~~~~~--h~~~v~~l~~~------~~~~~l~s~s~dg~i~iwd~~~----~~~~~~~~~~~~~~~ 353 (515)
|.|.+||++..+- +..+.+ ...+|..++.- +.+.+++..+.+ ...|.+.- .-++..+...+...+
T Consensus 258 G~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cis 335 (463)
T KOG1645|consen 258 GMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICIS 335 (463)
T ss_pred ceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceee
Confidence 9999999976542 222222 22344444432 334445544433 34555432 122222232333334
Q ss_pred EEECCCCCEEEEEECCC-----------------cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE-EEEC
Q psy6127 354 AAYDPEGLAFAIGVNSD-----------------SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL-VSTN 415 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~dg-----------------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~-~~s~ 415 (515)
+..++..+.++...... --.+|..+..-.. ......... ..+.-.++.++++ ++..
T Consensus 336 mqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~G---s~~~kl~t~---~ai~~~~~nn~iv~~gd~ 409 (463)
T KOG1645|consen 336 MQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFG---SKQTKLSTT---QAIRAVEDNNYIVVVGDS 409 (463)
T ss_pred eeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccC---Ccccccccc---cceeccccccEEEEecCC
Confidence 44455444444433220 0112211110000 000000001 1222234555555 4446
Q ss_pred CCcEEEEECCCCceeEEeeccccCCCCCEEEEEec-C-CCEEEEEeCCCcEEEEECC
Q psy6127 416 GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP-D-SQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~-g~~l~sgs~dg~I~iwd~~ 470 (515)
.+.+.+||..+++.++.+... .++.+++... + +.+|++-. |..++||..+
T Consensus 410 tn~lil~D~~s~evvQ~l~~~----epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~e 461 (463)
T KOG1645|consen 410 TNELILQDPHSFEVVQTLALS----EPVLDICPNDTNGSSYLALLT-DDRVHIYKNE 461 (463)
T ss_pred cceeEEeccchhheeeecccC----cceeecceeecCCcchhhhee-cceEEEEecC
Confidence 678999999999998888753 3366665543 2 34666654 5668888754
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.8e-07 Score=81.68 Aligned_cols=207 Identities=14% Similarity=0.239 Sum_probs=135.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-eEE----EEe-------------cCCCeeEEEECCCC--CEEEE
Q psy6127 306 HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN-NVG----MIQ-------------LSGNKPIAAYDPEG--LAFAI 365 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~-~~~----~~~-------------~~~~~~~~~~s~~~--~~l~~ 365 (515)
....|+++.|...|.++++|...|.|.+|.-.... |.. .++ ....+..+.|-.++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 34678999999999999999999999999755432 111 111 22335556665543 35677
Q ss_pred EECCCcEEEEEeecCCC-----------------CCce---e------------------eecCCCCCcCeEEEEEcCCC
Q psy6127 366 GVNSDSIKLYDVRSYDK-----------------GPFA---S------------------FKCPGERGCEWTGLKFSPDG 407 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~-----------------~~~~---~------------------~~~~~~~~~~i~~l~~sp~~ 407 (515)
.+.|.+|++|.+..... .+.. . ......|...+.++.|+.|.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 77999999999875310 0000 0 00113466678899999988
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEeeccccCC-----CCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeE------E
Q psy6127 408 KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN-----ASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYK------V 475 (515)
Q Consensus 408 ~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~------~ 475 (515)
..++++ .|=.|.+|++.-......+.....+. .-|++..|+|.. ..+.-.+..|.|++-|++...+ +
T Consensus 185 et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~kl 263 (460)
T COG5170 185 ETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKL 263 (460)
T ss_pred heeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhh
Confidence 877765 56789999876543322222222221 237888999965 4555667789999999974321 1
Q ss_pred E--EEcC-------CCCCCeEEEEECCCCCEEEEeeC-CEEEEcCCCC
Q psy6127 476 C--VLDG-------DHPSAVQSLQFNPKYHMLASACS-NMAFWIPTLS 513 (515)
Q Consensus 476 ~--~~~~-------~h~~~V~~l~~sp~~~~las~~~-dv~iW~~~~~ 513 (515)
. .+.+ +-...|.++.|+|+|+++++-+- +++|||..+.
T Consensus 264 fe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~ 311 (460)
T COG5170 264 FELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMA 311 (460)
T ss_pred hhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccc
Confidence 1 1111 12356889999999999999884 5999998764
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.5e-05 Score=73.97 Aligned_cols=263 Identities=15% Similarity=0.163 Sum_probs=143.6
Q ss_pred cCCCCEEEEEe---------CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 230 SSDGSLLISCS---------DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 230 spd~~~lasgs---------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
|||+++++... ..+.+.++|+++++....... ...+....|+|+|+.++++. ++.|.+++..++...
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~---~~nly~~~~~~~~~~ 76 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR---DNNLYLRDLATGQET 76 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE---TTEEEEESSTTSEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe---cCceEEEECCCCCeE
Confidence 67888877642 236789999998765443333 67789999999999999886 899999998887554
Q ss_pred EEe-cC-------C---------CCCeEEEEEcCCCCEEEEEeCC-Cc--------------------------------
Q psy6127 301 RYF-PG-------H---------VRKVSSLNLSPVDDSFISGSYD-KT-------------------------------- 330 (515)
Q Consensus 301 ~~~-~~-------h---------~~~v~~l~~~~~~~~l~s~s~d-g~-------------------------------- 330 (515)
+.- .| - -+.-..+.|+||+++|+....| ..
T Consensus 77 ~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np 156 (353)
T PF00930_consen 77 QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNP 156 (353)
T ss_dssp ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---
T ss_pred EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCC
Confidence 322 22 0 1123568899999988765432 22
Q ss_pred ---EEEEEcCCCCeEEEE-e-----cCCCeeEEEECCCCCEEEEEE--CCC---cEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 331 ---VRVWDLRQPNNVGMI-Q-----LSGNKPIAAYDPEGLAFAIGV--NSD---SIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 331 ---i~iwd~~~~~~~~~~-~-----~~~~~~~~~~s~~~~~l~~g~--~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
+.++|+.+++....- . ...-+..+.|.++++.++..- .+. .+.++|..++......... ...--.
T Consensus 157 ~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~-~~~Wv~ 235 (353)
T PF00930_consen 157 RVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEET-SDGWVD 235 (353)
T ss_dssp EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEE-SSSSSS
T ss_pred ceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEec-CCccee
Confidence 333444444432111 1 111245578888888444432 222 3556666554332222111 111111
Q ss_pred CeEEEEEc-CCCCE-EEEEECCCc--EEEEECCCCceeEEeeccccCCCCCE-EEEEecCCCEEE-EEeCC----CcEEE
Q psy6127 397 EWTGLKFS-PDGKL-ILVSTNGSI--IRLFDAFNGNCVQSLSGVLNNNASPL-EATFTPDSQFVA-SGSTD----GQVHI 466 (515)
Q Consensus 397 ~i~~l~~s-p~~~~-l~~~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~i~-~~~~sp~g~~l~-sgs~d----g~I~i 466 (515)
.-....|. +++.. +.....+|. |.+++...+.. +.+.. ....|. -+.++++++.|+ ++..+ ..++.
T Consensus 236 ~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~-~~lT~---G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~ 311 (353)
T PF00930_consen 236 VYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKP-RQLTS---GDWEVTSILGWDEDNNRIYFTANGDNPGERHLYR 311 (353)
T ss_dssp SSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEE-EESS----SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEE
T ss_pred eecccccccCCCCEEEEEEEcCCCcEEEEEcccccce-ecccc---CceeecccceEcCCCCEEEEEecCCCCCceEEEE
Confidence 12245554 66554 445556775 55556555543 33322 223353 477888877554 45442 24666
Q ss_pred EECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 467 WNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 467 wd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
-++..+..+..+.. ..+.-..+.|||++++++-..
T Consensus 312 v~~~~~~~~~~LT~-~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 312 VSLDSGGEPKCLTC-EDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp EETTETTEEEESST-TSSTTEEEEE-TTSSEEEEEE
T ss_pred EEeCCCCCeEeccC-CCCCceEEEECCCCCEEEEEE
Confidence 67772333444543 222226999999999887643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-05 Score=81.50 Aligned_cols=224 Identities=17% Similarity=0.090 Sum_probs=136.5
Q ss_pred EcCCCCEEEEEe-CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--eCCCeEEEEECCCCeeeEEecC
Q psy6127 229 YSSDGSLLISCS-DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--KVDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 229 ~spd~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--~~d~~v~vwd~~~~~~~~~~~~ 305 (515)
++|||+.+...+ ..+.+.+.|.++.+...++.... ....++++++++++++.+. -...++...+..+......+.-
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni 278 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI 278 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch
Confidence 456776554332 34678888888877777766543 4567889999998877651 1123344433332222222211
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-----CCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeec
Q psy6127 306 HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ-----PNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRS 379 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~ 379 (515)
.. + -++.++|++... .++.|.+.|.++ .+.+..+........+.++|||+++++++ .+.++.++|+..
T Consensus 279 ~~--i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k 352 (635)
T PRK02888 279 AR--I--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRK 352 (635)
T ss_pred HH--H--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence 00 0 133456776555 367899999998 46677778888899999999999987765 589999999987
Q ss_pred CCC------CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC----------CceeEEeeccccCCC--
Q psy6127 380 YDK------GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN----------GNCVQSLSGVLNNNA-- 441 (515)
Q Consensus 380 ~~~------~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~----------~~~~~~~~~~~~~~~-- 441 (515)
.+. .+...+...-.-.......+|+++|+...+-.-|..|..|++.+ ...+..+..|.....
T Consensus 353 ~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~ 432 (635)
T PRK02888 353 LDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNH 432 (635)
T ss_pred hhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceee
Confidence 542 01011111111122233789999998777888899999999876 223333333322110
Q ss_pred CCEEEEEecCCCEEEEEe
Q psy6127 442 SPLEATFTPDSQFVASGS 459 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs 459 (515)
....=.-.|||++|++..
T Consensus 433 ~~~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 433 ASMGETKEADGKWLVSLN 450 (635)
T ss_pred ecCCCcCCCCCCEEEEcc
Confidence 001112367888888764
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.4e-06 Score=83.14 Aligned_cols=209 Identities=14% Similarity=0.165 Sum_probs=136.1
Q ss_pred EEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCC-eEEEEEcCCCCEEEEEeCCCc-----EEEEEcCCC----
Q psy6127 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRK-VSSLNLSPVDDSFISGSYDKT-----VRVWDLRQP---- 339 (515)
Q Consensus 270 ~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~l~s~s~dg~-----i~iwd~~~~---- 339 (515)
+|++.+..+++++ .+|.|.+.+ ++-+.++.++.+... |..+....+..+|++.+.|+. +++||++.-
T Consensus 30 c~~s~~~~vvigt--~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 30 CCSSSTGSVVIGT--ADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred EEcCCCceEEEee--ccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 4667777777765 699888887 334555777777766 555555444468888877654 899998643
Q ss_pred --CeE---EEEe-----cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCE
Q psy6127 340 --NNV---GMIQ-----LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKL 409 (515)
Q Consensus 340 --~~~---~~~~-----~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~ 409 (515)
.++ +.+. .+.+..+++++.+-+.+|+|..+|.|..+.-.-.+..-. ..........+|+++++..+++.
T Consensus 107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgs-r~~~~~~~~~pITgL~~~~d~~s 185 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGS-RQDYSHRGKEPITGLALRSDGKS 185 (933)
T ss_pred CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhcccc-ceeeeccCCCCceeeEEecCCce
Confidence 333 2222 134567899999999999999999999985432211111 22333455679999999999887
Q ss_pred EEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCC
Q psy6127 410 ILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA 485 (515)
Q Consensus 410 l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 485 (515)
++....-..|.+|.+. |+. .....+..+.....|..+++...-+++++ +..+.+|+.+...+...+..+|...
T Consensus 186 ~lFv~Tt~~V~~y~l~-gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~~g~kk~ 258 (933)
T KOG2114|consen 186 VLFVATTEQVMLYSLS-GRT-PSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFEVGEKKE 258 (933)
T ss_pred eEEEEecceeEEEEec-CCC-cceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeecCCCeEE
Confidence 3333344579999987 443 22222333455588888887655455554 4459999998777777776225443
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.54 E-value=0.0003 Score=69.90 Aligned_cols=266 Identities=14% Similarity=0.177 Sum_probs=174.5
Q ss_pred cEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 223 KINSLDYSSDGSLLISCS-DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
....+.+.|++..+.... ....+...+................-..++.++.+...+.... .++.|.+.|..+.+...
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~-~~~~v~vid~~~~~~~~ 110 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTG-DSNTVSVIDTATNTVLG 110 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecC-CCCeEEEEcCcccceee
Confidence 556677888885544443 2224555554422222222222244567788899988777763 57999999988777766
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEe
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSY---DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDV 377 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~ 377 (515)
...--. ....++++|+++.++.+.. ++++.+.|..+.+.............++++|+|..+.... .++.+.++|.
T Consensus 111 ~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~ 189 (381)
T COG3391 111 SIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDT 189 (381)
T ss_pred Eeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCeEEEEeC
Confidence 554222 6778999999987777665 6899999999998888865554458899999999766654 7899999997
Q ss_pred ecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC---CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCE
Q psy6127 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG---SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQF 454 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 454 (515)
....... ...............+.++|+|+++.+.... +.+...|..++.....-.... .. ....+..+|+|+.
T Consensus 190 ~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~-~~-~~~~v~~~p~g~~ 266 (381)
T COG3391 190 SGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVG-SG-APRGVAVDPAGKA 266 (381)
T ss_pred CCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccc-cC-CCCceeECCCCCE
Confidence 6643111 0100011112223479999999977766544 589999988887665422111 11 3567899999999
Q ss_pred EEEEeC-CCcEEEEECCCCeEEEEEcCC--CCCCeEEEEECC
Q psy6127 455 VASGST-DGQVHIWNAERGYKVCVLDGD--HPSAVQSLQFNP 493 (515)
Q Consensus 455 l~sgs~-dg~I~iwd~~~~~~~~~~~~~--h~~~V~~l~~sp 493 (515)
+.+... .+.+.+-|..+.......... -...+..+++.+
T Consensus 267 ~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~ 308 (381)
T COG3391 267 AYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISP 308 (381)
T ss_pred EEEEecCCCeEEEEeCCCCceeeeecccccccccceecccee
Confidence 888844 488999999888777765531 112344555544
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.53 E-value=0.00011 Score=75.57 Aligned_cols=235 Identities=13% Similarity=0.128 Sum_probs=143.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCCc-----ee-EEEEecCCCeEEEEEe-------eCCCeEEEEECCCCeee
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKYG-----VD-LIKFTHSKTTAIHAST-------KVDATLRYLSLHDNKYV 300 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~-----v~-~~~~~~~~~~l~~~s~-------~~d~~v~vwd~~~~~~~ 300 (515)
..++.++.++.|.-+|.++|+.+......... +. ...+. +..+++.+. ..++.+..+|..+|+.+
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~ 188 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLL 188 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCcee
Confidence 57788889999999999999998877654321 11 11121 233444331 23688999999999988
Q ss_pred EEecCCCC--------------------Ce-EEEEEcCCCCEEEEEeCCC------------------cEEEEEcCCCCe
Q psy6127 301 RYFPGHVR--------------------KV-SSLNLSPVDDSFISGSYDK------------------TVRVWDLRQPNN 341 (515)
Q Consensus 301 ~~~~~h~~--------------------~v-~~l~~~~~~~~l~s~s~dg------------------~i~iwd~~~~~~ 341 (515)
..+..... .+ ...++.+.+..++.++.++ .+.-+|.++++.
T Consensus 189 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~ 268 (488)
T cd00216 189 WRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKV 268 (488)
T ss_pred eEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCE
Confidence 77643211 01 1234455567777777665 799999999999
Q ss_pred EEEEecCCC-e------eEEEEC----CCCC---EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC
Q psy6127 342 VGMIQLSGN-K------PIAAYD----PEGL---AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG 407 (515)
Q Consensus 342 ~~~~~~~~~-~------~~~~~s----~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~ 407 (515)
.-.++.... . ....+. -++. .+++++.+|.+..+|.++++..-..... ...++.+|
T Consensus 269 ~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~--------~~~~~~~~-- 338 (488)
T cd00216 269 KWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV--------EQPMAYDP-- 338 (488)
T ss_pred EEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee--------ccccccCC--
Confidence 887753211 0 001111 2343 5777888999999999987632111111 01233344
Q ss_pred CEEEEE------------------ECCCcEEEEECCCCceeEEeeccccCC-----CCCEEEEEecCCCEEEEEeCCCcE
Q psy6127 408 KLILVS------------------TNGSIIRLFDAFNGNCVQSLSGVLNNN-----ASPLEATFTPDSQFVASGSTDGQV 464 (515)
Q Consensus 408 ~~l~~~------------------s~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~i~~~~~sp~g~~l~sgs~dg~I 464 (515)
..++.+ ..+|.+.-.|..+|+.+-......... .+...-.....+..|+.++.||.+
T Consensus 339 ~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l 418 (488)
T cd00216 339 GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYF 418 (488)
T ss_pred ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeE
Confidence 233332 235778888988888766554321000 001111111246789999999999
Q ss_pred EEEECCCCeEEEEEcC
Q psy6127 465 HIWNAERGYKVCVLDG 480 (515)
Q Consensus 465 ~iwd~~~~~~~~~~~~ 480 (515)
+.+|.++|+.+.+.+.
T Consensus 419 ~ald~~tG~~lW~~~~ 434 (488)
T cd00216 419 RAFDATTGKELWKFRT 434 (488)
T ss_pred EEEECCCCceeeEEEC
Confidence 9999999999988764
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.5e-05 Score=81.20 Aligned_cols=186 Identities=12% Similarity=0.126 Sum_probs=132.0
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 343 (515)
..++|++++ +..+++++ .+|.|++.+....- .+...|... ..+|.++++|+.||+|.|-.+-+.+...
T Consensus 40 D~is~~av~--~~~~~~Gt--H~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~ 107 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGT--HRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEIT 107 (846)
T ss_pred hHHHHHHhh--cceeeecc--ccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccce
Confidence 345555554 34455554 79999999876433 333345444 5679999999999999999999999999
Q ss_pred EEecCCCeeEEEECCC-----CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCc
Q psy6127 344 MIQLSGNKPIAAYDPE-----GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~-----~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~ 418 (515)
.+..+.++.+++++|+ .+.+++|+..| +.++.-+-..... .. ......++|.+++| .|+++|-++.+|
T Consensus 108 ~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~--~v-~l~~~eG~I~~i~W--~g~lIAWand~G- 180 (846)
T KOG2066|consen 108 QYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD--SV-VLSEGEGPIHSIKW--RGNLIAWANDDG- 180 (846)
T ss_pred eEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc--ce-eeecCccceEEEEe--cCcEEEEecCCC-
Confidence 9999999999999997 57799998888 7777654322111 11 23455678999999 577999888777
Q ss_pred EEEEECCCCceeEEeeccccC---CCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 419 IRLFDAFNGNCVQSLSGVLNN---NASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 419 i~iwd~~~~~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
|++||+.+++.+..++..... ......+.|.++.+ |+.|- ..+|+|..++
T Consensus 181 v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIGW-~d~v~i~~I~ 233 (846)
T KOG2066|consen 181 VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIGW-GDSVKICSIK 233 (846)
T ss_pred cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEec-CCeEEEEEEe
Confidence 899999998877766543321 22345678876654 55554 4458888776
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.7e-05 Score=76.59 Aligned_cols=205 Identities=17% Similarity=0.250 Sum_probs=126.6
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC--eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA--TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~--~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
.+.+-|.+ +.....+......+..-+|+|++..++..+-...+ .+.++|+++++...... ..+.-...+|+|||+.
T Consensus 174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~ 251 (425)
T COG0823 174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSK 251 (425)
T ss_pred eEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCE
Confidence 34444433 44455555556677888999999988777533333 59999999887655543 3333455789999996
Q ss_pred EEE-EeCCCc--EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CCc--EEEEEeecCCCCCceeeecCCCCC
Q psy6127 322 FIS-GSYDKT--VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SDS--IKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 322 l~s-~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
|+. ...||. |.+.|+.++...+.....+....-.|+|||+.++..+. .|. |.+++..... . ..+.......
T Consensus 252 l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~--~-~riT~~~~~~ 328 (425)
T COG0823 252 LAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ--V-TRLTFSGGGN 328 (425)
T ss_pred EEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc--e-eEeeccCCCC
Confidence 654 455665 56668877774443333343446789999999988764 444 4444544432 1 1222211111
Q ss_pred cCeEEEEEcCCCCEEEEEEC-CCc--EEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC
Q psy6127 396 CEWTGLKFSPDGKLILVSTN-GSI--IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
..-.|+|||++++..+. +|. |.+.|+.++...+.+..... .....|.|+|+.+...+.
T Consensus 329 ---~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~----~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 329 ---SNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYL----NESPSWAPNGRMIMFSSG 389 (425)
T ss_pred ---cCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcccccc----CCCCCcCCCCceEEEecc
Confidence 16789999999987774 343 66777766654444432221 345678888887765543
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.45 E-value=8.7e-06 Score=82.98 Aligned_cols=110 Identities=9% Similarity=0.115 Sum_probs=85.4
Q ss_pred EEEEEEcCCCCEEEEEeC----CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 224 INSLDYSSDGSLLISCSD----DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
-+-.+|+|...++|+++- .|.|.||- ++|++-+...- .-.+++++|+|.. ++++.|-.-|.+.+|...+.+.
T Consensus 18 sti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-P~hatSLCWHpe~--~vLa~gwe~g~~~v~~~~~~e~ 93 (1416)
T KOG3617|consen 18 STISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-PVHATSLCWHPEE--FVLAQGWEMGVSDVQKTNTTET 93 (1416)
T ss_pred ccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc-ceehhhhccChHH--HHHhhccccceeEEEecCCcee
Confidence 344578888888888763 48888885 45665443321 2336679999976 4455556789999999988887
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~ 337 (515)
......|+.+|..+.|+|+|..++++..-|.+.+|...
T Consensus 94 htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 94 HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 77777899999999999999999999999999999775
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=98.43 E-value=0.00039 Score=65.94 Aligned_cols=232 Identities=14% Similarity=0.185 Sum_probs=139.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCC-CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe------
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQ-GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF------ 303 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~------ 303 (515)
..++.|+.|..+| +.+++... .+...... ...|..+...++-+.+++.+ |+.+.++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs---d~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS---DGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc---CCccEEEEchhhcccccccccccc
Confidence 3578899999999 89999833 33333222 23399999999988888886 799999998765443311
Q ss_pred --------cCCCCCeEEEE--EcCCCCEEEEEeCCCcEEEEEcCCC-----CeEEEEecCCCeeEEEECCCCCEEEEEEC
Q psy6127 304 --------PGHVRKVSSLN--LSPVDDSFISGSYDKTVRVWDLRQP-----NNVGMIQLSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 304 --------~~h~~~v~~l~--~~~~~~~l~s~s~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
......+...+ -.+.+...+......+|.+|..... +..+.+..+..+..++|. ++.++.|..
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTS 156 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeC
Confidence 11223444444 1223333444444568888877653 456777888888999998 667777764
Q ss_pred CCcEEEEEeecCCCCCceeeecC-------CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCC
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCP-------GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 441 (515)
+ ...+.|+.++........... .....++..+.. +++.+|++- +..-.+.| ..|+..+ ...-....
T Consensus 157 ~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~-~~G~~~r--~~~i~W~~ 229 (275)
T PF00780_consen 157 K-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVN-KNGEPSR--KSTIQWSS 229 (275)
T ss_pred C-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEc-CCCCcCc--ccEEEcCC
Confidence 4 577888886543222111110 011223333333 345566543 22333334 4555444 11111233
Q ss_pred CCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
.+..+++. ..+|+..+. +.|.||++.++++++.+..
T Consensus 230 ~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~~ 265 (275)
T PF00780_consen 230 APQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIPL 265 (275)
T ss_pred chhEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEEC
Confidence 36677774 567877765 4599999999999998875
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.43 E-value=0.00023 Score=70.74 Aligned_cols=223 Identities=16% Similarity=0.195 Sum_probs=158.7
Q ss_pred CcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCee
Q psy6127 222 DKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKY 299 (515)
Q Consensus 222 ~~I~~l~~spd~~~l-asgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~ 299 (515)
..-..++++++++.+ ++...++.|.+.|..+.+......... ....++++++++.++++-.. .++++.+.|..+++.
T Consensus 74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~ 152 (381)
T COG3391 74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV 152 (381)
T ss_pred ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE
Confidence 334577888888744 444456899999988777766665443 67789999999999888754 479999999999988
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEE-----EEecCCCeeEEEECCCCCEEEEEECC---C
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVG-----MIQLSGNKPIAAYDPEGLAFAIGVNS---D 370 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~s~~~~~l~~g~~d---g 370 (515)
......-..+ ..+++.|+|+.++.+. .++.|.+.|........ ..........+.++|+|..+.+.... +
T Consensus 153 ~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~ 231 (381)
T COG3391 153 TATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSN 231 (381)
T ss_pred EEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCc
Confidence 8775443344 8999999999666554 78999999977666553 23334446779999999977665443 5
Q ss_pred cEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCCceeEEeeccccCCCCCEEEE
Q psy6127 371 SIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAFNGNCVQSLSGVLNNNASPLEAT 447 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 447 (515)
.+...|..+.. .... ..... ....+..+|+|+++.+... .+.+.+.|..+................+..++
T Consensus 232 ~v~~id~~~~~-----v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~ 305 (381)
T COG3391 232 NVLKIDTATGN-----VTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIA 305 (381)
T ss_pred eEEEEeCCCce-----EEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceecc
Confidence 88888877643 2221 12222 3457899999999988854 48899999988887776665544444456666
Q ss_pred EecCC
Q psy6127 448 FTPDS 452 (515)
Q Consensus 448 ~sp~g 452 (515)
+.+..
T Consensus 306 ~~~~~ 310 (381)
T COG3391 306 ISPLY 310 (381)
T ss_pred ceeec
Confidence 66543
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.5e-05 Score=80.53 Aligned_cols=200 Identities=15% Similarity=0.201 Sum_probs=133.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEee----cCC-
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVR----SYD- 381 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~----~~~- 381 (515)
.+.|.++.|..+...++.+..+|.|.+-|..+......-.....+.+++|+||+..++..+..+++.+-+-. ..+
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 368999999999999999999999999998887766666677779999999999999999888877654321 000
Q ss_pred -------CCC---------ceeeecCCC------------------CCcCeEEEEEcCCCCEEEEEE----CC-CcEEEE
Q psy6127 382 -------KGP---------FASFKCPGE------------------RGCEWTGLKFSPDGKLILVST----NG-SIIRLF 422 (515)
Q Consensus 382 -------~~~---------~~~~~~~~~------------------~~~~i~~l~~sp~~~~l~~~s----~d-g~i~iw 422 (515)
... ...+....+ ....=++|+|--||+++++.. .+ +.|++|
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~ 227 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY 227 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence 000 000000000 011113699999999999843 23 789999
Q ss_pred ECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe---CCCcEEEEECCC---CeEEEEEcCCCCCCeEEEEECCCCC
Q psy6127 423 DAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS---TDGQVHIWNAER---GYKVCVLDGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 423 d~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs---~dg~I~iwd~~~---~~~~~~~~~~h~~~V~~l~~sp~~~ 496 (515)
|.+ |..-..-... ...-.+++|-|.|.++++-. .|+.|.++.... |+....++. ...+|..++|+.++.
T Consensus 228 drE-g~Lns~se~~---~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~-de~~ve~L~Wns~sd 302 (1265)
T KOG1920|consen 228 DRE-GALNSTSEPV---EGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPL-DEKEVEELAWNSNSD 302 (1265)
T ss_pred ccc-chhhcccCcc---cccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcc-cccchheeeecCCCC
Confidence 976 4332211111 11135799999999998763 566799998532 222222332 344599999999999
Q ss_pred EEEEe---e-CC-EEEEcCC
Q psy6127 497 MLASA---C-SN-MAFWIPT 511 (515)
Q Consensus 497 ~las~---~-~d-v~iW~~~ 511 (515)
+||.- . +. +++|-..
T Consensus 303 iLAv~~~~~e~~~v~lwt~~ 322 (1265)
T KOG1920|consen 303 ILAVVTSNLENSLVQLWTTG 322 (1265)
T ss_pred ceeeeecccccceEEEEEec
Confidence 99983 2 33 8898653
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.2e-06 Score=75.73 Aligned_cols=109 Identities=11% Similarity=0.159 Sum_probs=76.2
Q ss_pred EcCCCCEEEEEeC-----CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee-eEE
Q psy6127 229 YSSDGSLLISCSD-----DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY-VRY 302 (515)
Q Consensus 229 ~spd~~~lasgs~-----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~-~~~ 302 (515)
+-..++++.++.. -+..+.|+++..+....-......|.+++-+|..+.+++++ +.||.+-+||.+.... ...
T Consensus 140 ~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cg-t~dg~~~l~d~rn~~~p~S~ 218 (319)
T KOG4714|consen 140 ICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCG-TDDGIVGLWDARNVAMPVSL 218 (319)
T ss_pred eeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEe-cCCCeEEEEEcccccchHHH
Confidence 3334555554432 13345566543322222222234589999999888877665 5899999999988753 355
Q ss_pred ecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCC
Q psy6127 303 FPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~ 338 (515)
+..|+.+++.+.|+|.+ ..|+++++||.+.-||..+
T Consensus 219 l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 219 LKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred HHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 68899999999999965 4899999999999999765
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.00057 Score=60.93 Aligned_cols=141 Identities=11% Similarity=0.033 Sum_probs=94.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEE
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSS 312 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 312 (515)
..+++.||..+.+.--|.++|+....-.- ...+.+-+.- -|+.++++. ..|.+++.+.++|.....+..-..-=..
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~v-vgdfVV~GC--y~g~lYfl~~~tGs~~w~f~~~~~vk~~ 98 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAIV-VGDFVVLGC--YSGGLYFLCVKTGSQIWNFVILETVKVR 98 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeEE-ECCEEEEEE--ccCcEEEEEecchhheeeeeehhhhccc
Confidence 45778888888888889888877654321 1223332222 355555544 7999999999999877776543322233
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCee-EEEECCCCCEEEEEECCCcEEEEEe
Q psy6127 313 LNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKP-IAAYDPEGLAFAIGVNSDSIKLYDV 377 (515)
Q Consensus 313 l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~s~~~~~l~~g~~dg~i~i~d~ 377 (515)
....+++..+..|+.|++....|.++..++...+..+.+. +-++.|-...|..+...|.+.--..
T Consensus 99 a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~ 164 (354)
T KOG4649|consen 99 AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTK 164 (354)
T ss_pred eEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEcc
Confidence 4567789999999999999999999999998877665443 4566663334444445555443333
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.0001 Score=72.82 Aligned_cols=267 Identities=12% Similarity=0.129 Sum_probs=140.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC------
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD------ 296 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~------ 296 (515)
.|+.+.|+++..-|+.|...|.|.||.....+.-. .....+-..+.+.+-. ..++.-.+-|+..
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~l~di~~r~~~~~ 72 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRRFS--------LNNSPGKLTDISDRAPPSL 72 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE--------------------S----------GGGSS-SEEE-GGG--TT-
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCccccccc--------ccCCCcceEEehhhCCccc
Confidence 58999999998899999999999999876433221 0001111111111110 0122222333322
Q ss_pred ---CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC---------CeeEEEEC-----CC
Q psy6127 297 ---NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG---------NKPIAAYD-----PE 359 (515)
Q Consensus 297 ---~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~~s-----~~ 359 (515)
..+...+....++|++++.+ |=.+++.|..+|.+.|.|+|....+..-.... .+.++.|. .|
T Consensus 73 ~~gf~P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D 151 (395)
T PF08596_consen 73 KEGFLPLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGD 151 (395)
T ss_dssp SEEEEEEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTS
T ss_pred ccccCchhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCC
Confidence 12344455668999999997 45589999999999999999988877653322 35556554 23
Q ss_pred C---CEEEEEECCCcEEEEEeecCCCCCc-eeee-cCCCCCcCeEEEE-EcCC-C-------------------CEEEEE
Q psy6127 360 G---LAFAIGVNSDSIKLYDVRSYDKGPF-ASFK-CPGERGCEWTGLK-FSPD-G-------------------KLILVS 413 (515)
Q Consensus 360 ~---~~l~~g~~dg~i~i~d~~~~~~~~~-~~~~-~~~~~~~~i~~l~-~sp~-~-------------------~~l~~~ 413 (515)
+ -.+++|+..|.+.+|.+.-...... ..+. ....+.+++..+. |+.+ | +-+++.
T Consensus 152 ~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVv 231 (395)
T PF08596_consen 152 GYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVV 231 (395)
T ss_dssp SSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEE
T ss_pred cccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEE
Confidence 3 4688999999999998863111111 1111 1123344444444 3221 0 123444
Q ss_pred ECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe-----cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC---CCCC
Q psy6127 414 TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT-----PDSQFVASGSTDGQVHIWNAERGYKVCVLDGD---HPSA 485 (515)
Q Consensus 414 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s-----p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~---h~~~ 485 (515)
..+..++++...+.+........ ......+.+- ..+..|++-..+|.|++|.+..-+.+....-. +...
T Consensus 232 vSe~~irv~~~~~~k~~~K~~~~---~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~ 308 (395)
T PF08596_consen 232 VSESDIRVFKPPKSKGAHKSFDD---PFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRR 308 (395)
T ss_dssp E-SSEEEEE-TT---EEEEE-SS----EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHH
T ss_pred EcccceEEEeCCCCcccceeecc---ccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccc
Confidence 45678999998887765544321 1112334442 35667888889999999999999888777641 1123
Q ss_pred eEEEEECCCCCEEEEeeC
Q psy6127 486 VQSLQFNPKYHMLASACS 503 (515)
Q Consensus 486 V~~l~~sp~~~~las~~~ 503 (515)
+...+++++|.+++-.+.
T Consensus 309 ~~~ssis~~Gdi~~~~gp 326 (395)
T PF08596_consen 309 LSSSSISRNGDIFYWTGP 326 (395)
T ss_dssp HTT-EE-TTS-EEEE-SS
T ss_pred ccccEECCCCCEEEEeCc
Confidence 446778999998877664
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.0012 Score=62.32 Aligned_cols=265 Identities=13% Similarity=0.098 Sum_probs=164.1
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------eCCCeEEEEECCCCeeeEEe--cC-CCC---
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------KVDATLRYLSLHDNKYVRYF--PG-HVR--- 308 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~~d~~v~vwd~~~~~~~~~~--~~-h~~--- 308 (515)
+.+.++|.++++.+-.+...- ...+..+|+++.+++++. .....|.+||..+-.+.... .. |..
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~--~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGF--LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEES--SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEeeccc--CCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 479999999998877775432 334667999999988763 23456999999998776543 22 111
Q ss_pred -CeEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 309 -KVSSLNLSPVDDSFISG--SYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 309 -~v~~l~~~~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
....++++.|+++++.. +--.+|.+.|+..++.+..+..++-....- ++ .+.+.+-+.||.+.-..+....+...
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP-~~-~~~F~~lC~DGsl~~v~Ld~~Gk~~~ 172 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYP-SG-NRGFSMLCGDGSLLTVTLDADGKEAQ 172 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEE-EE-TTEEEEEETTSCEEEEEETSTSSEEE
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEe-cC-CCceEEEecCCceEEEEECCCCCEeE
Confidence 22346888899976664 345679999999999998888776222222 22 24577788999999988885433222
Q ss_pred eeeecCCCCCcC-eEEEEEcCCCCEEEEEECCCcEEEEECCCCce--eEEeecccc-------CCCCCEEEEEecCCCEE
Q psy6127 386 ASFKCPGERGCE-WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC--VQSLSGVLN-------NNASPLEATFTPDSQFV 455 (515)
Q Consensus 386 ~~~~~~~~~~~~-i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~--~~~~~~~~~-------~~~~i~~~~~sp~g~~l 455 (515)
...........+ +..-+++..+..++.-+.+|.|+--|+..... ...+..... ..+.-.-+++++..+.|
T Consensus 173 ~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rl 252 (342)
T PF06433_consen 173 KSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRL 252 (342)
T ss_dssp EEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEE
T ss_pred eeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeE
Confidence 222222222222 22444555555666678889999888765542 222221100 11123457888766666
Q ss_pred EEEe---CCC-------cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee---CCEEEEcCCCC
Q psy6127 456 ASGS---TDG-------QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC---SNMAFWIPTLS 513 (515)
Q Consensus 456 ~sgs---~dg-------~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~---~dv~iW~~~~~ 513 (515)
++.- .+| .|.++|+.+++.+.+++. ..++.+++.+.+.+ +|.+.+ +++.+||...+
T Consensus 253 yvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l--~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tG 322 (342)
T PF06433_consen 253 YVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL--EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATG 322 (342)
T ss_dssp EEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE--EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT-
T ss_pred EEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC--CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCC
Confidence 5432 122 488999999999999985 34688999998665 554433 45999998754
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.0013 Score=58.76 Aligned_cols=106 Identities=9% Similarity=-0.058 Sum_probs=73.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS 311 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~ 311 (515)
-|++++.|...|.+.+.+.++|.....+...+.--......+++..++.. +.|++.+..|..+..++...+...+...
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycg--shd~~~yalD~~~~~cVykskcgG~~f~ 139 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCG--SHDGNFYALDPKTYGCVYKSKCGGGTFV 139 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEe--cCCCcEEEecccccceEEecccCCceec
Confidence 46789999999999999999998877765443222233455667666655 4899999999999999988775555555
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q psy6127 312 SLNLSPVDDSFISGSYDKTVRVWDLRQP 339 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~dg~i~iwd~~~~ 339 (515)
+-+..|-...|+.+...|.+.--..+..
T Consensus 140 sP~i~~g~~sly~a~t~G~vlavt~~~~ 167 (354)
T KOG4649|consen 140 SPVIAPGDGSLYAAITAGAVLAVTKNPY 167 (354)
T ss_pred cceecCCCceEEEEeccceEEEEccCCC
Confidence 5666664445555566666555444443
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.38 E-value=9.4e-05 Score=76.08 Aligned_cols=203 Identities=13% Similarity=0.157 Sum_probs=134.0
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCC-CeEEEEEeeCCC----eEEEEECCCC
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK-TTAIHASTKVDA----TLRYLSLHDN 297 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~~~d~----~v~vwd~~~~ 297 (515)
.|+| |++.+..+|.|+.+|.|.+.+-. -+.++.+..+...+-..-+.-++ ..+++.+ -.++ .+++|+++..
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~-Ed~~~np~llkiw~lek~ 102 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVG-EDEQGNPVLLKIWDLEKV 102 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEe-ecCCCCceEEEEeccccc
Confidence 4444 57788899999999998888743 45557777777663333334444 4444444 2233 6999998643
Q ss_pred ------eee---EEec----CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC---CCCeEE--EEecCCCeeEEEECCC
Q psy6127 298 ------KYV---RYFP----GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR---QPNNVG--MIQLSGNKPIAAYDPE 359 (515)
Q Consensus 298 ------~~~---~~~~----~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~---~~~~~~--~~~~~~~~~~~~~s~~ 359 (515)
.++ +.+. ....++.+++.+.+-+.+|.|-.+|.|..+.-+ ...... ......+++.+++..+
T Consensus 103 ~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d 182 (933)
T KOG2114|consen 103 DKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD 182 (933)
T ss_pred CCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence 222 1111 135678999999999999999999999988432 111122 2245567999999999
Q ss_pred CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
+..++.......|.+|.+.... + .......++....+..+++....+++++. ..+.+|+.....+-..+.
T Consensus 183 ~~s~lFv~Tt~~V~~y~l~gr~--p--~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 183 GKSVLFVATTEQVMLYSLSGRT--P--SLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred CceeEEEEecceeEEEEecCCC--c--ceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeec
Confidence 8885555566789999998432 1 23334677888889999887664555543 469999987555545554
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.9e-05 Score=77.35 Aligned_cols=203 Identities=19% Similarity=0.219 Sum_probs=130.1
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEe---CC-CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCE
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGS---YD-KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~ 362 (515)
..+.+-|.+ +.....+..-...+..-+|+|+++.++..+ .. ..+.++|+++++........+......|+|||+.
T Consensus 173 ~~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~ 251 (425)
T COG0823 173 YELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSK 251 (425)
T ss_pred ceEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCE
Confidence 345555544 555555555566788889999998655442 22 4599999999988888877776778899999999
Q ss_pred EEEEE-CCCc--EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CC--cEEEEECCCCceeEEeecc
Q psy6127 363 FAIGV-NSDS--IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-GS--IIRLFDAFNGNCVQSLSGV 436 (515)
Q Consensus 363 l~~g~-~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg--~i~iwd~~~~~~~~~~~~~ 436 (515)
++... .||. |.++|+.... .. .+. ...+.-+.-.|+|||++++..+. .| .|.+++...+...+ +...
T Consensus 252 l~f~~~rdg~~~iy~~dl~~~~--~~-~Lt---~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~r-iT~~ 324 (425)
T COG0823 252 LAFSSSRDGSPDIYLMDLDGKN--LP-RLT---NGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTR-LTFS 324 (425)
T ss_pred EEEEECCCCCccEEEEcCCCCc--ce-ecc---cCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeE-eecc
Confidence 88765 4555 5555666543 11 122 12222236789999999987764 34 46666766665432 3222
Q ss_pred ccCCCCCEEEEEecCCCEEEEEeC-CCc--EEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 437 LNNNASPLEATFTPDSQFVASGST-DGQ--VHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 437 ~~~~~~i~~~~~sp~g~~l~sgs~-dg~--I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
... -..-.|+|||++++..+. +|. |.+.|+.++.....+. +......-.|.|++..+...+
T Consensus 325 ~~~---~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt--~~~~~e~ps~~~ng~~i~~~s 388 (425)
T COG0823 325 GGG---NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT--STYLNESPSWAPNGRMIMFSS 388 (425)
T ss_pred CCC---CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc--ccccCCCCCcCCCCceEEEec
Confidence 222 126789999999887764 344 6777776666544443 334444667777777766654
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.0015 Score=65.23 Aligned_cols=112 Identities=11% Similarity=0.169 Sum_probs=76.3
Q ss_pred EEEEEcCC-CCEEEEE----ECCCc----EEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 399 TGLKFSPD-GKLILVS----TNGSI----IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 399 ~~l~~sp~-~~~l~~~----s~dg~----i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
..+.||-. ...+.+- +.+|. -.+|+...++..+.-...-...+.+.+++++|+...++.|+.||.|.+||.
T Consensus 209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~ 288 (545)
T PF11768_consen 209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDT 288 (545)
T ss_pred EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEc
Confidence 36777763 3334332 23343 356666554432221112234455999999999999999999999999998
Q ss_pred CCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC--CEEEEcCCCC
Q psy6127 470 ERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS--NMAFWIPTLS 513 (515)
Q Consensus 470 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--dv~iW~~~~~ 513 (515)
..+..... . ..-..+.++|+|+|.++++|+. .+.+||+..+
T Consensus 289 ~~~~t~~~-k--a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 289 TRGVTLLA-K--AEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred CCCeeeee-e--ecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 77644432 2 4456789999999999999984 5889998665
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.1e-05 Score=83.04 Aligned_cols=175 Identities=17% Similarity=0.221 Sum_probs=128.1
Q ss_pred eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEE
Q psy6127 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAF 363 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l 363 (515)
+....+..+|+++.+..+...-..+.|.-++.+ ++.+.+|...|+|.+-|.++.+.+.++..+. .....|+-.|+.|
T Consensus 154 g~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~N--nr~lf~G~t~G~V~LrD~~s~~~iht~~aHs-~siSDfDv~GNlL 230 (1118)
T KOG1275|consen 154 GLQEKLIHIDLNTEKETRTTNVSASGVTIMRYN--NRNLFCGDTRGTVFLRDPNSFETIHTFDAHS-GSISDFDVQGNLL 230 (1118)
T ss_pred chhhheeeeecccceeeeeeeccCCceEEEEec--CcEEEeecccceEEeecCCcCceeeeeeccc-cceeeeeccCCeE
Confidence 367778889999988887776555557767665 8899999999999999999999999997665 4556788899999
Q ss_pred EEEEC---------CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEECCCC-ce-eE
Q psy6127 364 AIGVN---------SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNG-NC-VQ 431 (515)
Q Consensus 364 ~~g~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~~-~~-~~ 431 (515)
++++. |..|++||+|..+... .+..+... .-+.|.|. ...+++++..|...+-|..+. .+ ..
T Consensus 231 itCG~S~R~~~l~~D~FvkVYDLRmmral~--PI~~~~~P----~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~ 304 (1118)
T KOG1275|consen 231 ITCGYSMRRYNLAMDPFVKVYDLRMMRALS--PIQFPYGP----QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAG 304 (1118)
T ss_pred EEeecccccccccccchhhhhhhhhhhccC--CcccccCc----hhhhhcccccceEEEEecccceeeccccccCCCccc
Confidence 99874 5578999999865322 11111111 24677774 357888888999999884321 22 12
Q ss_pred EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 432 SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
....+. ....+..+.++++|+.++.|..+|.|.+|.
T Consensus 305 ~~~v~p-~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 305 VKMVNP-NGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred eeEEcc-CCCcceeEEecCCCceEEEecccCcEeeec
Confidence 222122 223389999999999999999999999997
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.33 E-value=0.00064 Score=70.01 Aligned_cols=234 Identities=16% Similarity=0.177 Sum_probs=138.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCc------ee--EEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG------VD--LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~------v~--~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~ 304 (515)
+..++.++.++.+.-.|..+|+.+..+...... +. .+... ++..+++++ .++.|+.+|.++|+.+..+.
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~--~~g~v~AlD~~TG~~~W~~~ 137 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGT--FDGRLVALDAETGKQVWKFG 137 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEec--CCCeEEEEECCCCCEeeeec
Confidence 446777888899999999999988776543320 00 01111 224555554 69999999999999987765
Q ss_pred CCCCC-----e-EEEEEcCCCCEEEEEe---------CCCcEEEEEcCCCCeEEEEecCCC-------------------
Q psy6127 305 GHVRK-----V-SSLNLSPVDDSFISGS---------YDKTVRVWDLRQPNNVGMIQLSGN------------------- 350 (515)
Q Consensus 305 ~h~~~-----v-~~l~~~~~~~~l~s~s---------~dg~i~iwd~~~~~~~~~~~~~~~------------------- 350 (515)
..... + .+..+. +..++.++ .++.+..+|..+|+.+-.+.....
T Consensus 138 ~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g 215 (488)
T cd00216 138 NNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGG 215 (488)
T ss_pred CCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCC
Confidence 43221 1 112222 24455554 367899999999998877644211
Q ss_pred --e-eEEEECCCCCEEEEEECCC------------------cEEEEEeecCCCCCceeeecC-----CCCCcCe-EEEEE
Q psy6127 351 --K-PIAAYDPEGLAFAIGVNSD------------------SIKLYDVRSYDKGPFASFKCP-----GERGCEW-TGLKF 403 (515)
Q Consensus 351 --~-~~~~~s~~~~~l~~g~~dg------------------~i~i~d~~~~~~~~~~~~~~~-----~~~~~~i-~~l~~ 403 (515)
+ ...++++.+..++.++.++ .+.-+|..+++..-....... .....++ ..+.
T Consensus 216 ~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~- 294 (488)
T cd00216 216 GTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK- 294 (488)
T ss_pred CCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc-
Confidence 0 1245556677788887665 688888887653211111000 0000011 0110
Q ss_pred cCCCC---EEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE------------------eCCC
Q psy6127 404 SPDGK---LILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG------------------STDG 462 (515)
Q Consensus 404 sp~~~---~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg------------------s~dg 462 (515)
.-++. .+++++.+|.+...|.++|+.+-...... ..++.+| ..++.+ ..+|
T Consensus 295 ~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~------~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G 366 (488)
T cd00216 295 PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE------QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKG 366 (488)
T ss_pred ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec------cccccCC--ceEEEccccccccCcccccCCCCCCCce
Confidence 01333 57788899999999999999876654321 1123333 223322 2457
Q ss_pred cEEEEECCCCeEEEEEcC
Q psy6127 463 QVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 463 ~I~iwd~~~~~~~~~~~~ 480 (515)
.+.-.|..+|+.+-+...
T Consensus 367 ~l~AlD~~tG~~~W~~~~ 384 (488)
T cd00216 367 GLAALDPKTGKVVWEKRE 384 (488)
T ss_pred EEEEEeCCCCcEeeEeeC
Confidence 888889999988877654
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.33 E-value=0.0007 Score=62.14 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=120.8
Q ss_pred EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC-CCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy6127 258 TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH-VRKVSSLNLSPVDDSFISGSYDKTVRVWDL 336 (515)
Q Consensus 258 ~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~ 336 (515)
.+.+-...+..++|.|+.+.++++. +..+.|..++. +|+.++.+.-. .+..-.+++..++.++++.-.++.+.++++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~-d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQ-DEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEE-TTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEE-CCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 4555666799999999999988887 57888988886 47777766432 356888999887777776666899999988
Q ss_pred CCCC----e--EEEEe------cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCC--CCCcee----eecCCCCCcCe
Q psy6127 337 RQPN----N--VGMIQ------LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD--KGPFAS----FKCPGERGCEW 398 (515)
Q Consensus 337 ~~~~----~--~~~~~------~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~----~~~~~~~~~~i 398 (515)
.... . ...+. .......++|+|.++.|+++-+..-..+|.++... ...... ..........+
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDL 173 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS--
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccc
Confidence 4321 1 12222 22336789999998888888777778888887521 110000 01012233457
Q ss_pred EEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeecccc------CCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 399 TGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLN------NNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 399 ~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~------~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
.+++++|.. .+++.+..+..+..+| .+|+.+..+.-..+ .....-.++|.++|++.+ .++-+..+++
T Consensus 174 S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-vsEpNlfy~f 247 (248)
T PF06977_consen 174 SGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-VSEPNLFYRF 247 (248)
T ss_dssp -EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-EETTTEEEEE
T ss_pred cceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-EcCCceEEEe
Confidence 799999965 4555666788888999 67877665553321 122367899999986554 4566665554
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00023 Score=71.80 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=83.2
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~ 298 (515)
|...|.--+++..+++++.|+.-|.+.+|+-..++....-.. ..+.+.....+++.. ++.++ +..|.|.++-+..+.
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~-lvAag-t~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEY-LVAAG-TASGRVSVFQLNKEL 109 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhH-hhhhh-cCCceEEeehhhccC
Confidence 344555556667789999999999999999887665443332 334444455555554 44333 468899999877643
Q ss_pred ee-----EEe-cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy6127 299 YV-----RYF-PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 299 ~~-----~~~-~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~ 338 (515)
+. ... +.|...|++++|++++..+++|...|+|..-.+.+
T Consensus 110 p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 110 PRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 22 111 23788999999999999999999999999888776
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.2e-05 Score=80.65 Aligned_cols=204 Identities=11% Similarity=0.173 Sum_probs=125.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe--cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC
Q psy6127 306 HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG 383 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~ 383 (515)
|...|.--++...+++++.|+.-|.+.+|+-..++....-. ..+.....+++++..++|+|+..|.|.++-+......
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 44556666677779999999999999999977765543332 3344567889999999999999999999998874332
Q ss_pred Cceee-ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC
Q psy6127 384 PFASF-KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 384 ~~~~~-~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d 461 (515)
....+ .....|...|++++|++++..+++|...|.|..-.+... .............+.|..+... ..+|.+++--
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~--q~~LLVStl~ 189 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL--QSYLLVSTLT 189 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc--cceehHhhhh
Confidence 22222 223446889999999999999999999999998887762 1111111111122335444443 2333333222
Q ss_pred CcEEEEECCCCe--EEEEEcCCCCCC-eEEEEECCC-----CCEEEEeeCCEEEEcCCCCC
Q psy6127 462 GQVHIWNAERGY--KVCVLDGDHPSA-VQSLQFNPK-----YHMLASACSNMAFWIPTLSA 514 (515)
Q Consensus 462 g~I~iwd~~~~~--~~~~~~~~h~~~-V~~l~~sp~-----~~~las~~~dv~iW~~~~~~ 514 (515)
. ..+++++.++ .+..-+ -.+. -...+|-|. ...|+++--..|+|..+..+
T Consensus 190 r-~~Lc~tE~eti~QIG~k~--R~~~~~~GACF~~g~~~~q~~~IycaRPG~RlWead~~G 247 (726)
T KOG3621|consen 190 R-CILCQTEAETITQIGKKP--RKSLIDFGACFFPGQCKAQKPQIYCARPGLRLWEADFAG 247 (726)
T ss_pred h-hheeecchhHHHHhcCCC--cCCccccceEEeeccccCCCceEEEecCCCceEEeecce
Confidence 2 3344444332 111111 1111 234455442 34555555568999987654
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.0048 Score=61.83 Aligned_cols=208 Identities=13% Similarity=0.141 Sum_probs=115.5
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe------eeEEecCCCCCeEEEEEcC
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK------YVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~------~~~~~~~h~~~v~~l~~~~ 317 (515)
.|+||+.. |+.+..+.-..+.+.++.|+.+...+ +.. .||.++++|+.... .+....-....+....+..
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~Lv-vV~--~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~ 137 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEELV-VVQ--SDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYK 137 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCeEE-EEE--cCCEEEEEeCCCceeechhhhccccCcccccccccccCC
Confidence 59999875 77777766555899999999865544 444 59999999986333 0111111112222233333
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCC-eEEEE-ecCC---------Cee-EEEECCCCCEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPN-NVGMI-QLSG---------NKP-IAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~-~~~~~-~~~~---------~~~-~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
+|-.++ ..++.+.+.+-.... ..+.+ .... ... ...++.+....+....++.+.+.+-...+
T Consensus 138 ~GivvL--t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~---- 211 (410)
T PF04841_consen 138 NGIVVL--TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFK---- 211 (410)
T ss_pred CCEEEE--CCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEccccc----
Confidence 442333 334444333222211 11111 0000 000 12344455555555555666644433211
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
. -...+++..+++||+|+++|.-..+|.+.+.+..-.+....+... ....+..+.|.-+...++.- +..+.
T Consensus 212 -~----i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~--~~~~p~~~~WCG~dav~l~~--~~~l~ 282 (410)
T PF04841_consen 212 -Q----IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD--SKSPPKQMAWCGNDAVVLSW--EDELL 282 (410)
T ss_pred -c----ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC--cCCCCcEEEEECCCcEEEEe--CCEEE
Confidence 0 122457899999999999999999999999987666666555543 23346788888665443332 34566
Q ss_pred EEECC
Q psy6127 466 IWNAE 470 (515)
Q Consensus 466 iwd~~ 470 (515)
+....
T Consensus 283 lvg~~ 287 (410)
T PF04841_consen 283 LVGPD 287 (410)
T ss_pred EECCC
Confidence 66543
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.0022 Score=63.22 Aligned_cols=246 Identities=13% Similarity=0.115 Sum_probs=137.6
Q ss_pred EEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCC-----------------C
Q psy6127 201 TKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK-----------------K 263 (515)
Q Consensus 201 i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~-----------------~ 263 (515)
+.++| +.+.+....... ...+....|||+|+.+|... ++.|.+++..+++..+.-... -
T Consensus 25 y~i~d--~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~ 100 (353)
T PF00930_consen 25 YYIYD--IETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVF 100 (353)
T ss_dssp EEEEE--TTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTS
T ss_pred EEEEe--cCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccccc
Confidence 44555 444333333223 67788999999999999886 578999998877544322111 1
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCe-----------------------------------EEEEECCCCeeeEE--e---
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDAT-----------------------------------LRYLSLHDNKYVRY--F--- 303 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~-----------------------------------v~vwd~~~~~~~~~--~--- 303 (515)
+.-..+-|+||++++++..-+ +.. +.++|+.+++.... .
T Consensus 101 ~~~~~~~WSpd~~~la~~~~d-~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~ 179 (353)
T PF00930_consen 101 DRRSAVWWSPDSKYLAFLRFD-EREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSL 179 (353)
T ss_dssp SSSBSEEE-TTSSEEEEEEEE--TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHH
T ss_pred ccccceEECCCCCEEEEEEEC-CcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeecccc
Confidence 223578899999999887632 221 33455555543211 1
Q ss_pred cCCCCCeEEEEEcCCCCEEEE--EeCCC---cEEEEEcCCCCeEEEEecC--CC---eeEEEEC-CCCCE-EEEEECCCc
Q psy6127 304 PGHVRKVSSLNLSPVDDSFIS--GSYDK---TVRVWDLRQPNNVGMIQLS--GN---KPIAAYD-PEGLA-FAIGVNSDS 371 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~~~l~s--~s~dg---~i~iwd~~~~~~~~~~~~~--~~---~~~~~~s-~~~~~-l~~g~~dg~ 371 (515)
..-...+..+.|.++++.|+. ..++. .+.+.|..++.+....... .- .....+. +++.. +.....+|.
T Consensus 180 ~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~ 259 (353)
T PF00930_consen 180 NPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGY 259 (353)
T ss_dssp HTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSS
T ss_pred CCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCC
Confidence 123456788999999884433 33333 3667788877665444221 11 2245554 55554 445557787
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeE-EEEEcCCCCEEEE-EECC----CcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWT-GLKFSPDGKLILV-STNG----SIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~-~l~~sp~~~~l~~-~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
-++|-+...... ..........|. -+.++++++.++. +..+ ..++.-++..+..+..+...... -..
T Consensus 260 ~hly~~~~~~~~----~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~---~~~ 332 (353)
T PF00930_consen 260 RHLYLYDLDGGK----PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGD---HYS 332 (353)
T ss_dssp EEEEEEETTSSE----EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSST---TEE
T ss_pred cEEEEEcccccc----eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCC---ceE
Confidence 777766653321 222233344564 4778888877664 4432 24555566623334444433222 258
Q ss_pred EEEecCCCEEEEE
Q psy6127 446 ATFTPDSQFVASG 458 (515)
Q Consensus 446 ~~~sp~g~~l~sg 458 (515)
+.|||+|++++..
T Consensus 333 ~~~Spdg~y~v~~ 345 (353)
T PF00930_consen 333 ASFSPDGKYYVDT 345 (353)
T ss_dssp EEE-TTSSEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 9999999988754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=8.6e-07 Score=87.64 Aligned_cols=202 Identities=14% Similarity=0.200 Sum_probs=130.7
Q ss_pred CcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCee--eeEecCCCCceeEEEEecCCCeEEEEEe---eCCCeEEEEEC
Q psy6127 222 DKINSLDYSSD--GSLLISCSDDDQIIIYDCEQGTS--KNTINSKKYGVDLIKFTHSKTTAIHAST---KVDATLRYLSL 294 (515)
Q Consensus 222 ~~I~~l~~spd--~~~lasgs~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~---~~d~~v~vwd~ 294 (515)
..+.|++++-+ ...++.|..+|.|-+-......- ....+++....++++|++-....+.++- ..|..+.+||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 34566665543 35788899999999887764322 2345677788999999987544444431 23678999999
Q ss_pred CCC--eee--EEecC-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-EEEecCCCeeEEEECC-CCCEEEEEE
Q psy6127 295 HDN--KYV--RYFPG-HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-GMIQLSGNKPIAAYDP-EGLAFAIGV 367 (515)
Q Consensus 295 ~~~--~~~--~~~~~-h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~s~-~~~~l~~g~ 367 (515)
.++ .+. ..+.+ -.....+++|..+.+++.+|.....++++|++..... ..+.. ..+..+.++| .++++++-.
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnT-k~vqG~tVdp~~~nY~cs~~ 215 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNT-KYVQGITVDPFSPNYFCSNS 215 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhh-hhcccceecCCCCCceeccc
Confidence 877 222 22222 3345668899988889999999999999999843222 22222 2266678888 777777654
Q ss_pred CCCcEEEEE-eecCCCCCceeeecCCCCCcCeEEEEEcCCCC-EEEEEE-CCCcEEEEECC
Q psy6127 368 NSDSIKLYD-VRSYDKGPFASFKCPGERGCEWTGLKFSPDGK-LILVST-NGSIIRLFDAF 425 (515)
Q Consensus 368 ~dg~i~i~d-~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~s-~dg~i~iwd~~ 425 (515)
||.|.+|| .+.-+................+..++|.|... .+++.+ ..++|+.+|+.
T Consensus 216 -dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 216 -DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred -cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 99999999 44333222222222223334578999999543 444444 56789999975
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.0023 Score=58.85 Aligned_cols=201 Identities=14% Similarity=0.199 Sum_probs=113.9
Q ss_pred EecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecC--CCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 302 YFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLS--GNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
.+.+-...++.++|+|+.+ ++++....+.|..++. +|+.++.+... +....+++..++.++++.-.++.+.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 4556666799999999866 5556667788888886 57888877554 347788998777766665568999999985
Q ss_pred cCCCCC-c---eeee--cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC---CceeEEe--ecc---ccCCCCCE
Q psy6127 379 SYDKGP-F---ASFK--CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN---GNCVQSL--SGV---LNNNASPL 444 (515)
Q Consensus 379 ~~~~~~-~---~~~~--~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~---~~~~~~~--~~~---~~~~~~i~ 444 (515)
...... . ..+. ....++..+-+++|+|.++.|+++-+..-..+|.+.. ...+... ... ......+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 432211 1 1122 2334566788999999988888887776666776643 2221111 111 11223378
Q ss_pred EEEEecCC-CEEEEEeCCCcEEEEECCCCeEEEEEcC--C-C-----CCCeEEEEECCCCCEEEEeeCC
Q psy6127 445 EATFTPDS-QFVASGSTDGQVHIWNAERGYKVCVLDG--D-H-----PSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 445 ~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~-h-----~~~V~~l~~sp~~~~las~~~d 504 (515)
.++++|.. .+++....+..+..+| .+|+.+..+.- . | -..--.|+|.++|.+.+++-.+
T Consensus 175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpN 242 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPN 242 (248)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTT
T ss_pred ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCc
Confidence 89999975 4555566778899999 67777665543 1 1 1346799999999888776544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00065 Score=67.65 Aligned_cols=89 Identities=18% Similarity=0.262 Sum_probs=70.0
Q ss_pred EEEECCCCeeeE---EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 290 RYLSLHDNKYVR---YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 290 ~vwd~~~~~~~~---~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
.+|+...++..+ +--...+.|.+++++|+...++.|+.||+|.+||...+..... ...-.+..++|+|+|..+++|
T Consensus 239 ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~ 317 (545)
T PF11768_consen 239 CIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVG 317 (545)
T ss_pred EEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEE
Confidence 456655443221 1124778899999999999999999999999999987744433 444447789999999999999
Q ss_pred ECCCcEEEEEeec
Q psy6127 367 VNSDSIKLYDVRS 379 (515)
Q Consensus 367 ~~dg~i~i~d~~~ 379 (515)
+..|.+.+||+.-
T Consensus 318 s~qGelQ~FD~AL 330 (545)
T PF11768_consen 318 SEQGELQCFDMAL 330 (545)
T ss_pred cCCceEEEEEeec
Confidence 9999999999875
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0012 Score=66.30 Aligned_cols=227 Identities=14% Similarity=0.132 Sum_probs=116.7
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~ 298 (515)
...-....+.++|+|++++.++ ||.-.|+.....+... .+.-....|.+.+. .++.. ..++|.++.--+.+
T Consensus 30 ~~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k~-----~G~g~~~vw~~~n~-yAv~~--~~~~I~I~kn~~~~ 100 (443)
T PF04053_consen 30 SCEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNKA-----FGSGLSFVWSSRNR-YAVLE--SSSTIKIYKNFKNE 100 (443)
T ss_dssp E-SS--SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEEE-----EEE-SEEEE-TSSE-EEEE---TTS-EEEEETTEE-
T ss_pred CCCcCCeeEEECCCCCEEEEEc-CCEEEEEEccCCcccc-----cCceeEEEEecCcc-EEEEE--CCCeEEEEEcCccc
Confidence 3445578999999999999854 6888888854433322 13345678888554 44443 47889986332233
Q ss_pred eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 299 YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 299 ~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
....++.. ..+..+-. |..|...+.+ .|.+||..+++.+..+.... +..+.|+++|.+++..+.+ .+.+++..
T Consensus 101 ~~k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 101 VVKSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SIYILKYN 173 (443)
T ss_dssp TT-----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred cceEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence 22233211 12333332 7777766654 89999999999999998765 8999999999999998754 67777655
Q ss_pred cC------CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 379 SY------DKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 379 ~~------~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
.. +......+.........|.+.+|..+ .++-.+.. .++.+ ..|+.. .+... ..++.-+.+.|..
T Consensus 174 ~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkYl--~~Ge~~-~i~~l---d~~~yllgy~~~~ 244 (443)
T PF04053_consen 174 LEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKYL--VNGETG-IIAHL---DKPLYLLGYLPKE 244 (443)
T ss_dssp HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEEE--ETTEEE-EEEE----SS--EEEEEETTT
T ss_pred chhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEEE--EcCCcc-eEEEc---CCceEEEEEEccC
Confidence 42 00000011111121345667888665 44444443 66663 334321 12111 1226667777766
Q ss_pred CEEEEEeCCCcEEEEECC
Q psy6127 453 QFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~ 470 (515)
+.++....|+.|..+.+.
T Consensus 245 ~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 245 NRLYLIDRDGNVISYELD 262 (443)
T ss_dssp TEEEEE-TT--EEEEE--
T ss_pred CEEEEEECCCCEEEEEEC
Confidence 777777788877777654
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.0058 Score=61.77 Aligned_cols=248 Identities=12% Similarity=0.064 Sum_probs=132.7
Q ss_pred cEEEEEEcCCCCEEEEE-eCC----CeEEEEECCCCeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeC---------CC
Q psy6127 223 KINSLDYSSDGSLLISC-SDD----DQIIIYDCEQGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKV---------DA 287 (515)
Q Consensus 223 ~I~~l~~spd~~~lasg-s~d----g~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~---------d~ 287 (515)
.+...++||||+++|.+ +.. .+++++|+++|+.+... ... ....+.|.++++.++...... ..
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 44467899999998866 333 46999999999776532 221 122399999999888876433 33
Q ss_pred eEEEEECCCCee--eEEecCCCCC--eEEEEEcCCCCEEEEEeC---C-CcEEEEEcCCC-----CeEEEEecCCCeeEE
Q psy6127 288 TLRYLSLHDNKY--VRYFPGHVRK--VSSLNLSPVDDSFISGSY---D-KTVRVWDLRQP-----NNVGMIQLSGNKPIA 354 (515)
Q Consensus 288 ~v~vwd~~~~~~--~~~~~~h~~~--v~~l~~~~~~~~l~s~s~---d-g~i~iwd~~~~-----~~~~~~~~~~~~~~~ 354 (515)
.|+.|.+.+... ...+...... ...+..++|+++++..+. + ..+.+.|+..+ ...............
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~ 282 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYY 282 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEE
Confidence 488888877643 2444443333 678899999997665432 2 34788888775 333333323323322
Q ss_pred EECCCCCEEEEEE---CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCC--cEEEEECCCCc
Q psy6127 355 AYDPEGLAFAIGV---NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGS--IIRLFDAFNGN 428 (515)
Q Consensus 355 ~~s~~~~~l~~g~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg--~i~iwd~~~~~ 428 (515)
.-+..+.+++... ..+.|.-.++....................+..+.. .+.+|+... .++ .|+++++..+.
T Consensus 283 v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~~~~ 360 (414)
T PF02897_consen 283 VDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLDDGK 360 (414)
T ss_dssp EEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT-TE
T ss_pred EEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEEECCCCc
Confidence 2222333333332 234555556555332111212222222224445544 444555444 333 58889988455
Q ss_pred eeEEeeccccCCCCCEEEEEecCCCEEEE-E-e--CCCcEEEEECCCCeEEE
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPDSQFVAS-G-S--TDGQVHIWNAERGYKVC 476 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~s-g-s--~dg~I~iwd~~~~~~~~ 476 (515)
....+.... .+.+..+...+++..+.. - + .-++++-||+.+++...
T Consensus 361 ~~~~~~~p~--~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~ 410 (414)
T PF02897_consen 361 ESREIPLPE--AGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTL 410 (414)
T ss_dssp EEEEEESSS--SSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEE
T ss_pred EEeeecCCc--ceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEE
Confidence 444444332 222445544555553332 2 2 23678899999887653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00041 Score=73.28 Aligned_cols=139 Identities=16% Similarity=0.191 Sum_probs=98.0
Q ss_pred eCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCC-------CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCe
Q psy6127 326 SYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG-------LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398 (515)
Q Consensus 326 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~-------~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (515)
.....|+-.|++.|+.+.....+..+....+.|+. ..-.+|-.+..+..||.|-...................
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence 45678999999999999999887766677777643 34567778899999999974322111111122344567
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 399 ~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
++++-+.+| +||+|+.+|.||+|| +.|+.-++.. .+-..+|..+..+.||+++++.+ +..+.+++.
T Consensus 581 s~~aTt~~G-~iavgs~~G~IRLyd-~~g~~AKT~l--p~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 581 SCFATTEDG-YIAVGSNKGDIRLYD-RLGKRAKTAL--PGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred eEEEecCCc-eEEEEeCCCcEEeec-ccchhhhhcC--CCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 788887777 889999999999999 4444333322 22345699999999999998765 455667664
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0085 Score=60.03 Aligned_cols=198 Identities=17% Similarity=0.263 Sum_probs=108.2
Q ss_pred eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC-----CeeEE-----EEC
Q psy6127 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG-----NKPIA-----AYD 357 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~-----~~s 357 (515)
.|.+|+.. |+.+..+.-..+.+.++.|+.+ ..|+.-..||.+++||+.... .+.... .+... .+.
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~~---~fsl~~~i~~~~v~e~~i~~~~~~ 136 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLFGEF---QFSLGEEIEEEKVLECRIFAIWFY 136 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCCCce---eechhhhccccCcccccccccccC
Confidence 47777743 4455444333378999999885 456667799999999987333 221111 11111 222
Q ss_pred CCCCEEEEEECCCcEEEEEeecCCCC-Cceee-ecCCC----C-CcCeE-EEEEcCCCCEEEEEECCCcEEEEECCCCce
Q psy6127 358 PEGLAFAIGVNSDSIKLYDVRSYDKG-PFASF-KCPGE----R-GCEWT-GLKFSPDGKLILVSTNGSIIRLFDAFNGNC 429 (515)
Q Consensus 358 ~~~~~l~~g~~dg~i~i~d~~~~~~~-~~~~~-~~~~~----~-~~~i~-~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 429 (515)
.+| ++.-..++.+.+. .+.... ..... ..+.. + ...+. ...++.+....+....++.+.+.+-...+.
T Consensus 137 ~~G--ivvLt~~~~~~~v--~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~ 212 (410)
T PF04841_consen 137 KNG--IVVLTGNNRFYVV--NNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ 212 (410)
T ss_pred CCC--EEEECCCCeEEEE--eCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc
Confidence 244 3333344444333 332211 00000 00000 0 00111 123444555555555555565444322211
Q ss_pred eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 430 ~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
+ ...+++..++.||+|+++|.-..+|.+.+.+.+-.+....+...-......+.|.-+...++.-
T Consensus 213 ---i----~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~ 277 (410)
T PF04841_consen 213 ---I----DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW 277 (410)
T ss_pred ---c----cCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe
Confidence 1 1234589999999999999999999999998877777777765334566788888765554443
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.004 Score=60.51 Aligned_cols=219 Identities=11% Similarity=0.098 Sum_probs=127.3
Q ss_pred CeEEEEECCCCeeeeEecCCC-CceeEEE---EecC----CCeEEEEEee--------CCCeEEEEECCCC----eeeEE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKK-YGVDLIK---FTHS----KTTAIHASTK--------VDATLRYLSLHDN----KYVRY 302 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~-~~v~~~~---~~~~----~~~l~~~s~~--------~d~~v~vwd~~~~----~~~~~ 302 (515)
..|++.|..+.+.+..+.-.. ..+.+++ +..+ ..+++++++- ..|.+.++++... ..+..
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 358888888877776654332 2334333 3322 3556666542 1289999999884 12221
Q ss_pred e--cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-eEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 303 F--PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN-NVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 303 ~--~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
. ....++|++++-. +..|+.+. ++.|.+|++...+ ....-.........+....++++++|.....+.++..+.
T Consensus 82 i~~~~~~g~V~ai~~~--~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~ 158 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSF--NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDE 158 (321)
T ss_dssp EEEEEESS-EEEEEEE--TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEET
T ss_pred EEEEeecCcceEhhhh--CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEc
Confidence 1 2356889999877 33454443 4899999999888 555444444455566666678999999999999887765
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-------Cc-eeEEeeccccCCCCCEEE---EE
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-------GN-CVQSLSGVLNNNASPLEA---TF 448 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-------~~-~~~~~~~~~~~~~~i~~~---~~ 448 (515)
... ....+ ........++++.|-++++.++++..+|.+.++.... +. .+...... .....|+++ .+
T Consensus 159 ~~~-~l~~v-a~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f-~lg~~v~~~~~~~l 235 (321)
T PF03178_consen 159 ENN-KLILV-ARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSF-HLGDIVNSFRRGSL 235 (321)
T ss_dssp TTE--EEEE-EEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEE-E-SS-EEEEEE--S
T ss_pred cCC-EEEEE-EecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEE-ECCCccceEEEEEe
Confidence 221 11111 1233355688899987777999999999999998652 22 22222111 122235665 44
Q ss_pred ec--CCC------EEEEEeCCCcEEEE
Q psy6127 449 TP--DSQ------FVASGSTDGQVHIW 467 (515)
Q Consensus 449 sp--~g~------~l~sgs~dg~I~iw 467 (515)
.| .+. .++.++.+|.|.+.
T Consensus 236 ~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 236 IPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp S--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred eecCCCCcccccceEEEEecCCEEEEE
Confidence 44 122 37777788888743
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.0015 Score=69.27 Aligned_cols=144 Identities=22% Similarity=0.244 Sum_probs=97.6
Q ss_pred CCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCC-eEEEEEcC-----CCCEEEEEeCCCcEEEEEcCCCC--eEE--
Q psy6127 274 SKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRK-VSSLNLSP-----VDDSFISGSYDKTVRVWDLRQPN--NVG-- 343 (515)
Q Consensus 274 ~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~-v~~l~~~~-----~~~~l~s~s~dg~i~iwd~~~~~--~~~-- 343 (515)
....+++........++-.|++.|+.+..+..|... |..++-.. ++..-+.|-.++.+..||.|-.. .+.
T Consensus 491 ~d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~ 570 (794)
T PF08553_consen 491 QDRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQ 570 (794)
T ss_pred cccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecc
Confidence 344555555445688999999999999999887754 55543321 12345677788999999998643 221
Q ss_pred --EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEE
Q psy6127 344 --MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRL 421 (515)
Q Consensus 344 --~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~i 421 (515)
.+.......|++-+.+| +||+|+.+|.||+||--. . +......+-+.+|.+|..+.||+|+++.+. ..+.+
T Consensus 571 ~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g-~----~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlL 643 (794)
T PF08553_consen 571 SKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLG-K----RAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLL 643 (794)
T ss_pred ccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccc-h----hhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEE
Confidence 11223335566666555 789999999999999432 2 122223455689999999999999986654 56777
Q ss_pred EEC
Q psy6127 422 FDA 424 (515)
Q Consensus 422 wd~ 424 (515)
++.
T Consensus 644 i~t 646 (794)
T PF08553_consen 644 IDT 646 (794)
T ss_pred EEE
Confidence 764
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00041 Score=71.26 Aligned_cols=259 Identities=11% Similarity=0.018 Sum_probs=146.5
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEe
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFT 272 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 272 (515)
+|+...+.+.++- .++++.+... -.-.+++++|+|..-.|+.|-.-|.+.+|...+.+.......|..++..+.|+
T Consensus 35 fS~er~GSVtIfa---dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS 110 (1416)
T KOG3617|consen 35 FSPERGGSVTIFA---DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWS 110 (1416)
T ss_pred ecCCCCceEEEEe---cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEec
Confidence 3555556666653 2233322111 11235679999998889999889999999998877777778899999999999
Q ss_pred cCCCeEEEEEeeCCCeEEEEECCCCeeeEE------------------ec---------------CCCCCeE-EE-----
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLHDNKYVRY------------------FP---------------GHVRKVS-SL----- 313 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~------------------~~---------------~h~~~v~-~l----- 313 (515)
++|..++++ +.-|.|.+|.......++. +. +....+- -.
T Consensus 111 ~~G~~l~t~--d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~ 188 (1416)
T KOG3617|consen 111 HDGTVLMTL--DNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKES 188 (1416)
T ss_pred CCCCeEEEc--CCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccc
Confidence 999988765 4689999998652211111 00 0000000 00
Q ss_pred --------EEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec------
Q psy6127 314 --------NLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS------ 379 (515)
Q Consensus 314 --------~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~------ 379 (515)
.-.|+|..++.++.+|+|.-.|- .|++.......+.+ .+-|.+...-+++-..+-.+.++-+..
T Consensus 189 ~a~rs~~ksgv~~g~~F~~~~~~GtVyyvdq-~g~~~~V~k~dS~v-QmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee 266 (1416)
T KOG3617|consen 189 LAERSDEKSGVPKGTEFLFAGKSGTVYYVDQ-NGRQRTVHKLDSEV-QMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEE 266 (1416)
T ss_pred hhhccccccCCCCCcEEEEEcCCceEEEEcC-CCcEEEEEEccchH-HHHHhcccceEEEEeeeceeeEEEecCCCchHH
Confidence 01245566777777887776663 34444333322211 111222211122211111111111110
Q ss_pred ----------CCC----------C-CceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC-C------CceeE
Q psy6127 380 ----------YDK----------G-PFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF-N------GNCVQ 431 (515)
Q Consensus 380 ----------~~~----------~-~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~-~------~~~~~ 431 (515)
+.. . .....+.....+..+++++++..+..+..|...|.+.+|--. . +.-..
T Consensus 267 ~~~vk~sgk~GgrqGgiA~sEssGvLr~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w 346 (1416)
T KOG3617|consen 267 RCAVKVSGKLGGRQGGIACSESSGVLRKSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVNKGFQGDPTIDVW 346 (1416)
T ss_pred hhhhhhccccCCccCccccccccccccCCcchhhhcCCceEEEEEeccceEEEecccCCcEEEeeecCccccCCCCcceE
Confidence 000 0 000111111234568899999999999999999999999532 2 12344
Q ss_pred EeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 432 SLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
.+.+.....+.|+.+.|.|-...++.-+
T Consensus 347 ~l~~~~e~~g~I~~i~Wg~~k~~~avn~ 374 (1416)
T KOG3617|consen 347 TLNGKRESLGKISLIRWGPIKSTAAVNT 374 (1416)
T ss_pred EecCchhhccceEEEEeccccchhhhhh
Confidence 5555555666799999998665555443
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.9e-06 Score=84.00 Aligned_cols=200 Identities=15% Similarity=0.191 Sum_probs=131.1
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee--eEEecCCCCCeEEEEEcCCC-CEEEEEe----CCCcEEEEEc
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY--VRYFPGHVRKVSSLNLSPVD-DSFISGS----YDKTVRVWDL 336 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~~-~~l~s~s----~dg~i~iwd~ 336 (515)
..+.|+++..+.+.-+.+.|..+|.|.+-.++...- ....++|..+.++++|++-. +.||.|- .|..+.|||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 456777777666655555556789999888765432 24456788999999999854 4566653 3667999999
Q ss_pred CCC--CeEEEEe----cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCE
Q psy6127 337 RQP--NNVGMIQ----LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKL 409 (515)
Q Consensus 337 ~~~--~~~~~~~----~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~ 409 (515)
.++ .+..... ......+++|..+.+.+.+|.....+.++|++... .....-....+.++..+| .++|
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~------~~~~svnTk~vqG~tVdp~~~nY 210 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSL------DSVSSVNTKYVQGITVDPFSPNY 210 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhh------hhhhhhhhhhcccceecCCCCCc
Confidence 887 2222211 22346689999899999999999999999998421 111122233456788888 7778
Q ss_pred EEEEECCCcEEEEEC-CCCc-eeEEeecccc-CCCCCEEEEEecCC-CEEEEEe-CCCcEEEEECC
Q psy6127 410 ILVSTNGSIIRLFDA-FNGN-CVQSLSGVLN-NNASPLEATFTPDS-QFVASGS-TDGQVHIWNAE 470 (515)
Q Consensus 410 l~~~s~dg~i~iwd~-~~~~-~~~~~~~~~~-~~~~i~~~~~sp~g-~~l~sgs-~dg~I~iwd~~ 470 (515)
+++-. ||.|.+||. ++-+ ++..+....+ ....+..++|+|.. ..+++.. ..++|+.+|+.
T Consensus 211 ~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 211 FCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 76554 999999993 3222 2222211111 12247889999964 3455555 45789999874
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0021 Score=64.44 Aligned_cols=213 Identities=13% Similarity=0.124 Sum_probs=106.3
Q ss_pred eeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEE
Q psy6127 191 LAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 270 (515)
+..++.++.++.+-+.....+.....-....+.-....|.+.++ +|+-...++|.|+.--+.+....++.. ..+..+-
T Consensus 38 ls~npngr~v~V~g~geY~iyt~~~~r~k~~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~k~i~~~-~~~~~If 115 (443)
T PF04053_consen 38 LSHNPNGRFVLVCGDGEYEIYTALAWRNKAFGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNEVVKSIKLP-FSVEKIF 115 (443)
T ss_dssp EEE-TTSSEEEEEETTEEEEEETTTTEEEEEEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT-----S-S-EEEEE
T ss_pred EEECCCCCEEEEEcCCEEEEEEccCCcccccCceeEEEEecCcc-EEEEECCCeEEEEEcCccccceEEcCC-cccceEE
Confidence 55666666665555443332221111112234445677998554 666666889999743333332344332 2233333
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-----------
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP----------- 339 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~----------- 339 (515)
. |..+...+ ++.|.+||+++++.++.+... +|..+.|++++++++..+.+ .+.+++.+..
T Consensus 116 ~---G~LL~~~~---~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e 186 (443)
T PF04053_consen 116 G---GNLLGVKS---SDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVE 186 (443)
T ss_dssp ----SSSEEEEE---TTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-G
T ss_pred c---CcEEEEEC---CCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCch
Confidence 2 65555443 668999999999999998743 38999999999999988765 6777765433
Q ss_pred CeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCc
Q psy6127 340 NNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418 (515)
Q Consensus 340 ~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~ 418 (515)
.....+ .....+.+.+|..+ .++..+.. .++. +-.++.. .+. .-..++.=+.+.|..+.++....|+.
T Consensus 187 ~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~~---~i~---~ld~~~yllgy~~~~~~ly~~Dr~~~ 255 (443)
T PF04053_consen 187 DAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGETG---IIA---HLDKPLYLLGYLPKENRLYLIDRDGN 255 (443)
T ss_dssp GGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEEE---EEE---E-SS--EEEEEETTTTEEEEE-TT--
T ss_pred hceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCcc---eEE---EcCCceEEEEEEccCCEEEEEECCCC
Confidence 123333 32566888999766 55555444 5655 4443321 111 11234555667776677777777777
Q ss_pred EEEEECC
Q psy6127 419 IRLFDAF 425 (515)
Q Consensus 419 i~iwd~~ 425 (515)
+..+.+.
T Consensus 256 v~~~~ld 262 (443)
T PF04053_consen 256 VISYELD 262 (443)
T ss_dssp EEEEE--
T ss_pred EEEEEEC
Confidence 7777654
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.027 Score=58.43 Aligned_cols=242 Identities=14% Similarity=0.171 Sum_probs=143.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCC----ceeEEEEecCCCeEEEEEee----CCCeEEEEECCCCeeeEEecC
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKY----GVDLIKFTHSKTTAIHASTK----VDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~s~~----~d~~v~vwd~~~~~~~~~~~~ 305 (515)
..++.++.|+.+.-.|.++|+.+........ .+.+--.- .+..+++.+.+ .+|.|..+|.++|+.+..+..
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v-~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLV-VKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEE-ECCEEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 4677788899999999999999876643211 11111011 13345554322 368999999999988765432
Q ss_pred CC-------------------------------CCeE-EEEEcCCCCEEEEEeC-----CC-----------cEEEEEcC
Q psy6127 306 HV-------------------------------RKVS-SLNLSPVDDSFISGSY-----DK-----------TVRVWDLR 337 (515)
Q Consensus 306 h~-------------------------------~~v~-~l~~~~~~~~l~s~s~-----dg-----------~i~iwd~~ 337 (515)
-. ..++ .+.+.|...+++.+.. ++ +|.-.|++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~ 279 (527)
T TIGR03075 200 VPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPD 279 (527)
T ss_pred cCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccc
Confidence 11 0111 2356666666665542 12 57778999
Q ss_pred CCCeEEEEecCC----------CeeEEEECCCCC---EEEEEECCCcEEEEEeecCCCCC---c---eee----e-----
Q psy6127 338 QPNNVGMIQLSG----------NKPIAAYDPEGL---AFAIGVNSDSIKLYDVRSYDKGP---F---ASF----K----- 389 (515)
Q Consensus 338 ~~~~~~~~~~~~----------~~~~~~~s~~~~---~l~~g~~dg~i~i~d~~~~~~~~---~---~~~----~----- 389 (515)
+|+..-.++... ...-+.+..+|+ .++.+..+|.+.+.|.++++... . ... .
T Consensus 280 TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~ 359 (527)
T TIGR03075 280 TGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGR 359 (527)
T ss_pred cCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCC
Confidence 999887774321 122233445776 67788999999999998875310 0 000 0
Q ss_pred --------------------cCCC-CCcCeEEEEEcCCCCEEEEEECC--------------------------------
Q psy6127 390 --------------------CPGE-RGCEWTGLKFSPDGKLILVSTNG-------------------------------- 416 (515)
Q Consensus 390 --------------------~~~~-~~~~i~~l~~sp~~~~l~~~s~d-------------------------------- 416 (515)
++.. .......++++|+..+++....+
T Consensus 360 p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~ 439 (527)
T TIGR03075 360 PIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDH 439 (527)
T ss_pred CccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCC
Confidence 0000 00012246777776666544332
Q ss_pred -CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 417 -SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 417 -g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
|.+.-+|+.+|+..-......... .. ...-.+.+++.++.+|.++.+|.++|+.+...+.
T Consensus 440 ~g~l~AiD~~tGk~~W~~~~~~p~~---~~-~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 440 MGSLIAWDPITGKIVWEHKEDFPLW---GG-VLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred ceeEEEEeCCCCceeeEecCCCCCC---Cc-ceEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 346777888887665554322111 11 1222456788888899999999999999988875
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.012 Score=56.88 Aligned_cols=303 Identities=15% Similarity=0.137 Sum_probs=134.8
Q ss_pred chhhccccccccCCceeEEEEEEeecccc-ceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEE
Q psy6127 158 DFELLHSLSSLESPHFVSLFVTFVSRVLT-MAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLL 236 (515)
Q Consensus 158 d~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~l 236 (515)
|-.||.++..+..+...+-.+-|..+.-+ ....|.|.++.++--.++--.+.+++..+.-.+-........++|+++.+
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~ 95 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRAL 95 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEE
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeE
Confidence 45667666666554433333333322211 11123333333332222221144444443333222223345677888888
Q ss_pred EEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEe--cCCCeEEEEEee--------------------CCCeEEEEEC
Q psy6127 237 ISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFT--HSKTTAIHASTK--------------------VDATLRYLSL 294 (515)
Q Consensus 237 asgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~s~~--------------------~d~~v~vwd~ 294 (515)
+.......++-.|+++.+....+......+....|. .++..++.+-.. ....|.-.|+
T Consensus 96 ~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl 175 (386)
T PF14583_consen 96 YYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDL 175 (386)
T ss_dssp EEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred EEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence 777666789999999988877777777766666664 344443322211 1345667788
Q ss_pred CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCC-CCeEEEEecCC---CeeEEEECCCCCEEEE
Q psy6127 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK-----TVRVWDLRQ-PNNVGMIQLSG---NKPIAAYDPEGLAFAI 365 (515)
Q Consensus 295 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg-----~i~iwd~~~-~~~~~~~~~~~---~~~~~~~s~~~~~l~~ 365 (515)
.+|+....+. -...+..+.|+|....++.-+..| .-++|-+++ +.....+.... .+..=-|.|||..+..
T Consensus 176 ~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y 254 (386)
T PF14583_consen 176 KTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWY 254 (386)
T ss_dssp TT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEE
T ss_pred CCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEE
Confidence 8887655554 456788999999877666654433 135665543 22222221111 1333568999988766
Q ss_pred EEC-----CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC----------------CcEEEEEC
Q psy6127 366 GVN-----SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG----------------SIIRLFDA 424 (515)
Q Consensus 366 g~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d----------------g~i~iwd~ 424 (515)
-+. +..|.-+|..+.+... .... .....+-.++||++++-=+.| ..|+++++
T Consensus 255 ~~~~~~~~~~~i~~~d~~t~~~~~--~~~~-----p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~ 327 (386)
T PF14583_consen 255 DSYTPGGQDFWIAGYDPDTGERRR--LMEM-----PWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDV 327 (386)
T ss_dssp EEEETTT--EEEEEE-TTT--EEE--EEEE------SEEEEEE-TTSSEEEEEE-------------------EEEEEET
T ss_pred EeecCCCCceEEEeeCCCCCCceE--EEeC-----CceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEecc
Confidence 332 3345556666543211 1111 123356667899887643332 14667888
Q ss_pred CCCceeEEeecccc-------C-CCCCEEEEEecCCCEEEEE-eCCCcEEEEEC
Q psy6127 425 FNGNCVQSLSGVLN-------N-NASPLEATFTPDSQFVASG-STDGQVHIWNA 469 (515)
Q Consensus 425 ~~~~~~~~~~~~~~-------~-~~~i~~~~~sp~g~~l~sg-s~dg~I~iwd~ 469 (515)
..++... +..|.. + ...=....|+|||++++-. ...|...||-+
T Consensus 328 ~~~~~~~-l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 328 EAGRFRK-LARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp TTTEEEE-EEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred ccCceee-eeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence 7765432 221210 0 0012468999999976654 46677666643
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.014 Score=55.69 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=127.5
Q ss_pred EEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-c-
Q psy6127 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-L- 347 (515)
Q Consensus 270 ~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~- 347 (515)
.|.++...++.+- -..+.|.-|+..+++.. .+. +.+.+.++..-..+..|+++. ..+.+++.+++..+..+. .
T Consensus 31 ~w~~~~~~L~w~D-I~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~~--~g~~~~~~~~~~~~t~~~~~~ 105 (307)
T COG3386 31 VWDPDRGALLWVD-ILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIACE--HGVRLLDPDTGGKITLLAEPE 105 (307)
T ss_pred cCcCCCCEEEEEe-CCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEEc--cccEEEeccCCceeEEecccc
Confidence 4667776666654 35788888988766432 222 233345555444455555543 335677776666533331 1
Q ss_pred ----CCCeeEEEECCCCCEEEEEEC---------CCcEEEEEee-cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE
Q psy6127 348 ----SGNKPIAAYDPEGLAFAIGVN---------SDSIKLYDVR-SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS 413 (515)
Q Consensus 348 ----~~~~~~~~~s~~~~~l~~g~~---------dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~ 413 (515)
....+.....|+|.+.+.... ...-.+|-+. .+. .......+-..-++++||||++.++.+
T Consensus 106 ~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~-----~~~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 106 DGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGG-----VVRLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred CCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCC-----EEEeecCcEEecCceEECCCCCEEEEE
Confidence 123456888899887766443 0112344443 211 222222323344589999999988877
Q ss_pred EC-CCcEEEEECCC--Ccee--EEeeccccCCCCCEEEEEecCCCEEEEEeCCC-cEEEEECCCCeEEEEEcCCCCCCeE
Q psy6127 414 TN-GSIIRLFDAFN--GNCV--QSLSGVLNNNASPLEATFTPDSQFVASGSTDG-QVHIWNAERGYKVCVLDGDHPSAVQ 487 (515)
Q Consensus 414 s~-dg~i~iwd~~~--~~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~h~~~V~ 487 (515)
.. .+.|.-|++.. +..- .............-.++...+|.+.+++..+| .|.+|+.+ |+++..+.. ....++
T Consensus 181 DT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~l-P~~~~t 258 (307)
T COG3386 181 DTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKL-PVKRPT 258 (307)
T ss_pred eCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEEC-CCCCCc
Confidence 65 47788887652 2111 11111111333456788888888776555554 89999988 999998887 446788
Q ss_pred EEEECC-CCCEEEE
Q psy6127 488 SLQFNP-KYHMLAS 500 (515)
Q Consensus 488 ~l~~sp-~~~~las 500 (515)
+++|-- +.+.|..
T Consensus 259 ~~~FgG~~~~~L~i 272 (307)
T COG3386 259 NPAFGGPDLNTLYI 272 (307)
T ss_pred cceEeCCCcCEEEE
Confidence 888865 4444443
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.003 Score=65.91 Aligned_cols=213 Identities=14% Similarity=0.100 Sum_probs=113.3
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe------eCCCeEEEEECCCCeeeEEecCCCCCeEEEEE
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST------KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~------~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~ 315 (515)
+|.+.-.+-..-.++.-..+....+...+.+|+++.+++... +....+.+++.. +.......+. ..+.-.|
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g~--~~t~PsW 404 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEGH--SLTRPSW 404 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecCC--CCCCceE
Confidence 565544432222222222233346788999999999887762 122356666652 2222223332 3788899
Q ss_pred cCCCCEEEEEeCC------------CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC
Q psy6127 316 SPVDDSFISGSYD------------KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG 383 (515)
Q Consensus 316 ~~~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~ 383 (515)
+|+|+.+++.... +.+.+.+++.++... .....+..+.|||||..++... +|.|.+--+......
T Consensus 405 spDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G 481 (591)
T PRK13616 405 SLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDG 481 (591)
T ss_pred CCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCC
Confidence 9998877776532 233333444443332 3345699999999999998876 467766333322221
Q ss_pred Ccee---eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CceeEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 384 PFAS---FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-GNCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 384 ~~~~---~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
.... ..........+..+.|.+++..+ ++..++...+|.+.- |.....+. ..+....+..++-+++ .++...
T Consensus 482 ~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~-~~n~~~~v~~vaa~~~--~iyv~~ 557 (591)
T PRK13616 482 QYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALP-SRNLSAPVVAVAASPS--TVYVTD 557 (591)
T ss_pred ceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCccccccC-CCCccCceEEEecCCc--eEEEEc
Confidence 1111 11111222335689999999854 555555445555432 22222111 1112334566666652 455555
Q ss_pred CCCcE
Q psy6127 460 TDGQV 464 (515)
Q Consensus 460 ~dg~I 464 (515)
.+|.+
T Consensus 558 ~~g~~ 562 (591)
T PRK13616 558 ARAVL 562 (591)
T ss_pred CCceE
Confidence 66633
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.018 Score=59.74 Aligned_cols=101 Identities=7% Similarity=-0.023 Sum_probs=68.0
Q ss_pred CCeEEEEECCCCeeeeEecCCCC-------------------------------cee-EEEEecCCCeEEEEEee---CC
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKY-------------------------------GVD-LIKFTHSKTTAIHASTK---VD 286 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~-------------------------------~v~-~~~~~~~~~~l~~~s~~---~d 286 (515)
+|.|..+|.++|+.+..+..-.. .+. .+++.+....+++.+|. .+
T Consensus 180 ~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~ 259 (527)
T TIGR03075 180 RGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWN 259 (527)
T ss_pred CcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCC
Confidence 68999999999988776532211 111 23566666677777643 11
Q ss_pred -----------CeEEEEECCCCeeeEEecCCCCCeE---------EEEEcCCCC---EEEEEeCCCcEEEEEcCCCCeE
Q psy6127 287 -----------ATLRYLSLHDNKYVRYFPGHVRKVS---------SLNLSPVDD---SFISGSYDKTVRVWDLRQPNNV 342 (515)
Q Consensus 287 -----------~~v~vwd~~~~~~~~~~~~h~~~v~---------~l~~~~~~~---~l~s~s~dg~i~iwd~~~~~~~ 342 (515)
.+|.-.|+++|+....++.....++ -+....+|+ .++.+..+|.+.+.|.++|+.+
T Consensus 260 ~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 260 SHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred CCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 2788889999998877754222222 223334565 7789999999999999999875
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.029 Score=53.56 Aligned_cols=221 Identities=17% Similarity=0.184 Sum_probs=127.4
Q ss_pred EcCCCC-EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec---
Q psy6127 229 YSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP--- 304 (515)
Q Consensus 229 ~spd~~-~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~--- 304 (515)
|.++.. ++.+--..+.|.-|+..+++.. .+... ..+.+......+..++ ++ +..+.+++.+++..+..+.
T Consensus 32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-~~~~p-~~~~~~~~~d~~g~Lv-~~---~~g~~~~~~~~~~~~t~~~~~~ 105 (307)
T COG3386 32 WDPDRGALLWVDILGGRIHRLDPETGKKR-VFPSP-GGFSSGALIDAGGRLI-AC---EHGVRLLDPDTGGKITLLAEPE 105 (307)
T ss_pred CcCCCCEEEEEeCCCCeEEEecCCcCceE-EEECC-CCcccceeecCCCeEE-EE---ccccEEEeccCCceeEEecccc
Confidence 677666 4445556788888988765432 23322 2234444333333443 33 5667778876665533321
Q ss_pred -C-CCCCeEEEEEcCCCCEEEEEeC------C---CcEEEEEcC-CCCeEEEEec-CCCeeEEEECCCCCEEEEEEC-CC
Q psy6127 305 -G-HVRKVSSLNLSPVDDSFISGSY------D---KTVRVWDLR-QPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVN-SD 370 (515)
Q Consensus 305 -~-h~~~v~~l~~~~~~~~l~s~s~------d---g~i~iwd~~-~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~-dg 370 (515)
+ -....+.+...|+|.+-++... + ..=.+|-+. .+..++.... -...+.++||||++.+..... .+
T Consensus 106 ~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~ 185 (307)
T COG3386 106 DGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPAN 185 (307)
T ss_pred CCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCC
Confidence 1 1245678889999886554333 0 111344444 4554444433 233567999999988877754 47
Q ss_pred cEEEEEeec--CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC-cEEEEECCCCceeEEeeccccCCCCCEEEE
Q psy6127 371 SIKLYDVRS--YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-IIRLFDAFNGNCVQSLSGVLNNNASPLEAT 447 (515)
Q Consensus 371 ~i~i~d~~~--~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 447 (515)
.|.-|++.. ................+..-.++...+|.+.+++..+| .|..|+.. |+.+..+..... .+++++
T Consensus 186 ~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~---~~t~~~ 261 (307)
T COG3386 186 RIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVK---RPTNPA 261 (307)
T ss_pred eEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCC---CCccce
Confidence 788887763 11111111122222334445788888898776554444 89999987 988888876532 267788
Q ss_pred Eec-CCCEEEEEe
Q psy6127 448 FTP-DSQFVASGS 459 (515)
Q Consensus 448 ~sp-~g~~l~sgs 459 (515)
|-- +.+.|++.+
T Consensus 262 FgG~~~~~L~iTs 274 (307)
T COG3386 262 FGGPDLNTLYITS 274 (307)
T ss_pred EeCCCcCEEEEEe
Confidence 753 445555444
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.74 E-value=7.3e-05 Score=46.13 Aligned_cols=39 Identities=33% Similarity=0.554 Sum_probs=34.8
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYD 249 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd 249 (515)
+++...+..|...|.+++|+|++.++++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 355667788999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.013 Score=58.01 Aligned_cols=81 Identities=20% Similarity=0.343 Sum_probs=59.6
Q ss_pred CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec----C----------------CC-
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP----D----------------SQ- 453 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp----~----------------g~- 453 (515)
...+.+++.+|++++.++...-|.|.++|+.++..++.+++..+.. +.|-. . ..
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAq-----c~wi~~~~~~~~~~~~~~~~~~~~~~~l~ 381 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQ-----CGWIEVPEEGDRDRSNSNSPKSSSRFALF 381 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccce-----EEEEEeecccccccccccccCCCCcceEE
Confidence 3457789999999999988888999999999999888888766532 22211 0 11
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 454 FVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
+++-+-.-|.|.||.+++|..+..+..
T Consensus 382 LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 382 LVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred EEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 233455788999999999888877754
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0063 Score=63.54 Aligned_cols=195 Identities=15% Similarity=0.132 Sum_probs=107.8
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEe------CCC--cEEEEEcCCCCeEEEEecCCCeeEEEEC
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGS------YDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYD 357 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s------~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s 357 (515)
+|.+.-.+-..-.++.-..+....+.+.+++|+|+.++..- .|+ .+.+++. .+.. ..+..........|+
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~g~~~t~PsWs 405 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLEGHSLTRPSWS 405 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeecCCCCCCceEC
Confidence 66665544333233322223334678999999999877655 243 4555554 2222 333233347788999
Q ss_pred CCCCEEEEEECCCc------------EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEE---E
Q psy6127 358 PEGLAFAIGVNSDS------------IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRL---F 422 (515)
Q Consensus 358 ~~~~~l~~g~~dg~------------i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~i---w 422 (515)
|+|..+++...... +.+.+++.+. ... .....|..+.|||||..++... ++.|++ -
T Consensus 406 pDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge------~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vv 476 (591)
T PRK13616 406 LDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASA------VAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVE 476 (591)
T ss_pred CCCCceEEEecCcceEEEeccCCCceEEEEeccCch------hhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEE
Confidence 99988887754322 2222332211 000 2245689999999999998766 467776 4
Q ss_pred ECCCCceeEEee----ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC-CeEEEEEcC-CCCCCeEEEEECCC
Q psy6127 423 DAFNGNCVQSLS----GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER-GYKVCVLDG-DHPSAVQSLQFNPK 494 (515)
Q Consensus 423 d~~~~~~~~~~~----~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~-~~~~~~~~~-~h~~~V~~l~~sp~ 494 (515)
....|. ..+. ........+..+.|.+++.++ ++..++...+|.+.- |.....+.. ....++.+++=+++
T Consensus 477 r~~~G~--~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~ 551 (591)
T PRK13616 477 QTEDGQ--YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS 551 (591)
T ss_pred eCCCCc--eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc
Confidence 444454 1221 011112225789999999855 555555444554432 322222222 13567888888874
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.051 Score=51.43 Aligned_cols=221 Identities=18% Similarity=0.166 Sum_probs=123.3
Q ss_pred cCCCeEEEEEeeCCCeEEEEECC-CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE--------
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLH-DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG-------- 343 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~-~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-------- 343 (515)
..++.+++++ .+| +.+++.. ........ +...|..+...|+-+.+++-+ |+.+.++++.......
T Consensus 5 ~~~~~L~vGt--~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 5 SWGDRLLVGT--EDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred cCCCEEEEEE--CCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccc
Confidence 3567777775 566 9999983 33333333 233499999999877666654 5999999987654443
Q ss_pred -------EEecCCCeeEEE--ECCCCCEEEEEECCCcEEEEEeecCCC---CCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 344 -------MIQLSGNKPIAA--YDPEGLAFAIGVNSDSIKLYDVRSYDK---GPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 344 -------~~~~~~~~~~~~--~s~~~~~l~~g~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
.+.....+...+ -.+.+...++......|.+|....... ...+.+..+ ..+..++|. ++.++
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp----~~~~~i~~~--~~~i~ 152 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP----DPPSSIAFL--GNKIC 152 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC----CCcEEEEEe--CCEEE
Confidence 112222233344 123444444444566999999887422 223333332 466788998 55777
Q ss_pred EEECCCcEEEEECCCCceeEEeeccccC--------CCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEE--EEcCC
Q psy6127 412 VSTNGSIIRLFDAFNGNCVQSLSGVLNN--------NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVC--VLDGD 481 (515)
Q Consensus 412 ~~s~dg~i~iwd~~~~~~~~~~~~~~~~--------~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~--~~~~~ 481 (515)
.|..+ ...+.|+.++.....+...... ......+.--+++.+|++- |..-.+.|. .|++.+ .+.
T Consensus 153 v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~-- 226 (275)
T PF00780_consen 153 VGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLCY--DNIGVFVNK-NGEPSRKSTIQ-- 226 (275)
T ss_pred EEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEEe--cceEEEEcC-CCCcCcccEEE--
Confidence 77755 4888999877654433211111 1112233333445666643 333333443 454333 222
Q ss_pred CCCCeEEEEECCCCCEEEEe-eCCEEEEcCCCC
Q psy6127 482 HPSAVQSLQFNPKYHMLASA-CSNMAFWIPTLS 513 (515)
Q Consensus 482 h~~~V~~l~~sp~~~~las~-~~dv~iW~~~~~ 513 (515)
-.....++++.. .+++.. ++.+.||++..+
T Consensus 227 W~~~p~~~~~~~--pyli~~~~~~iEV~~~~~~ 257 (275)
T PF00780_consen 227 WSSAPQSVAYSS--PYLIAFSSNSIEVRSLETG 257 (275)
T ss_pred cCCchhEEEEEC--CEEEEECCCEEEEEECcCC
Confidence 233555666643 344444 445999988764
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0003 Score=70.18 Aligned_cols=95 Identities=14% Similarity=0.193 Sum_probs=77.9
Q ss_pred CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCE-EEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPL-EATFTPDSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~-~~~~sp~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
...+..+.|+|.-..+|.+..+|.+.+..+. .+.+.++..+... ++ +++|.|||+.||.|-.||+|++.|+.++.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~---v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGEN---VTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCc---cceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 3456789999999999999999999999887 6667776643322 44 99999999999999999999999999998
Q ss_pred EEEEEcCCCCCCeEEEEECC
Q psy6127 474 KVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 474 ~~~~~~~~h~~~V~~l~~sp 493 (515)
.+....-.-...|.++-|.|
T Consensus 96 ~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 96 RLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred ceeccccccccchheeeccc
Confidence 88774333567788888874
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.054 Score=54.74 Aligned_cols=246 Identities=13% Similarity=0.099 Sum_probs=135.6
Q ss_pred EEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeee-ccccCCcEEEEEEcCCCCEEEEEeCCC----------
Q psy6127 175 SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKV-FRENTDKINSLDYSSDGSLLISCSDDD---------- 243 (515)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~-~~~h~~~I~~l~~spd~~~lasgs~dg---------- 243 (515)
...+++.+.....+.++..+|++...+++.| +.+++.+.. +..- .-..+.|.+|++.|+....+.
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~D--l~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~ 201 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFD--LETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYP 201 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEE--TTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEE--CCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence 3355666666666666776777778888888 666665542 2221 112399999988877665433
Q ss_pred -eEEEEECCCCeee--eEecCCCCc--eeEEEEecCCCeEEEEEeeC-C-CeEEEEECCCC----eeeEEecCCCCCe-E
Q psy6127 244 -QIIIYDCEQGTSK--NTINSKKYG--VDLIKFTHSKTTAIHASTKV-D-ATLRYLSLHDN----KYVRYFPGHVRKV-S 311 (515)
Q Consensus 244 -~i~iwd~~~~~~~--~~~~~~~~~--v~~~~~~~~~~~l~~~s~~~-d-~~v~vwd~~~~----~~~~~~~~h~~~v-~ 311 (515)
.|+.|.+.+.... ..+...... ...+..+++++++++.+.+. + ..+.+.|...+ .....+......+ .
T Consensus 202 ~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~ 281 (414)
T PF02897_consen 202 RQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEY 281 (414)
T ss_dssp EEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EE
T ss_pred cEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEE
Confidence 3788888766443 344443333 56788999999988766443 3 46888898874 2233333333333 3
Q ss_pred EEEEcCCCCEEEEEe---CCCcEEEEEcCCCCe---EEEE-ecCCCeeEEEECCCCCEEEEEE-CCC--cEEEEEee-cC
Q psy6127 312 SLNLSPVDDSFISGS---YDKTVRVWDLRQPNN---VGMI-QLSGNKPIAAYDPEGLAFAIGV-NSD--SIKLYDVR-SY 380 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s---~dg~i~iwd~~~~~~---~~~~-~~~~~~~~~~~s~~~~~l~~g~-~dg--~i~i~d~~-~~ 380 (515)
.+... .+.+++... ..+.|...++..... ...+ ..........+...+++|+... .++ .|+++++. ..
T Consensus 282 ~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~ 360 (414)
T PF02897_consen 282 YVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGK 360 (414)
T ss_dssp EEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TE
T ss_pred EEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCc
Confidence 34444 333444332 245677778877662 2233 4344344455555565655544 343 56777776 21
Q ss_pred CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE--E--CCCcEEEEECCCCcee
Q psy6127 381 DKGPFASFKCPGERGCEWTGLKFSPDGKLILVS--T--NGSIIRLFDAFNGNCV 430 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~--s--~dg~i~iwd~~~~~~~ 430 (515)
. .........+.+..+...++++.+... + .-++++.||+.+++..
T Consensus 361 ~-----~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 361 E-----SREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp E-----EEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred E-----EeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 1 222222334445666666666654432 2 2357888888888653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.015 Score=56.48 Aligned_cols=196 Identities=14% Similarity=0.180 Sum_probs=111.8
Q ss_pred CeEEEEECCCCeeeEEecCC-CCCeEEE---EEcCC----CCEEEEEeC----------CCcEEEEEcCCC-----C--e
Q psy6127 287 ATLRYLSLHDNKYVRYFPGH-VRKVSSL---NLSPV----DDSFISGSY----------DKTVRVWDLRQP-----N--N 341 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h-~~~v~~l---~~~~~----~~~l~s~s~----------dg~i~iwd~~~~-----~--~ 341 (515)
..|++.|..+.+.+..+.-. ...+.++ .+..+ ..+|+.|.. .|.|.++++... + .
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 35778887777766554321 2234433 34432 357776653 288999999884 2 2
Q ss_pred EEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEE
Q psy6127 342 VGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRL 421 (515)
Q Consensus 342 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~i 421 (515)
+......+++.+++-- +..++++ .++.+.+|++...+ ....... ......+.++... ++++++|.....+.+
T Consensus 82 i~~~~~~g~V~ai~~~--~~~lv~~-~g~~l~v~~l~~~~--~l~~~~~-~~~~~~i~sl~~~--~~~I~vgD~~~sv~~ 153 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSF--NGRLVVA-VGNKLYVYDLDNSK--TLLKKAF-YDSPFYITSLSVF--KNYILVGDAMKSVSL 153 (321)
T ss_dssp EEEEEESS-EEEEEEE--TTEEEEE-ETTEEEEEEEETTS--SEEEEEE-E-BSSSEEEEEEE--TTEEEEEESSSSEEE
T ss_pred EEEEeecCcceEhhhh--CCEEEEe-ecCEEEEEEccCcc--cchhhhe-ecceEEEEEEecc--ccEEEEEEcccCEEE
Confidence 2333556667766554 3445554 36899999999865 1111111 1122245555554 569999998888888
Q ss_pred EECCC-CceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC-------C--e--EEEEEcCCCCCCeEEE
Q psy6127 422 FDAFN-GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER-------G--Y--KVCVLDGDHPSAVQSL 489 (515)
Q Consensus 422 wd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~-------~--~--~~~~~~~~h~~~V~~l 489 (515)
+.... +..+..+.. ......++++.|-++++.++.+..+|.+.++.... + + ....+. ....|+++
T Consensus 154 ~~~~~~~~~l~~va~-d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~--lg~~v~~~ 230 (321)
T PF03178_consen 154 LRYDEENNKLILVAR-DYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFH--LGDIVNSF 230 (321)
T ss_dssp EEEETTTE-EEEEEE-ESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE---SS-EEEE
T ss_pred EEEEccCCEEEEEEe-cCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEE--CCCccceE
Confidence 75543 333333332 22233478888887777999999999999988752 2 2 223333 45678888
Q ss_pred ---EECC
Q psy6127 490 ---QFNP 493 (515)
Q Consensus 490 ---~~sp 493 (515)
++.|
T Consensus 231 ~~~~l~~ 237 (321)
T PF03178_consen 231 RRGSLIP 237 (321)
T ss_dssp EE--SS-
T ss_pred EEEEeee
Confidence 5555
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0042 Score=61.07 Aligned_cols=142 Identities=18% Similarity=0.205 Sum_probs=96.6
Q ss_pred CCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC--E-----EEEEeCCCcEEEEEcCCCCe--EEEE
Q psy6127 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD--S-----FISGSYDKTVRVWDLRQPNN--VGMI 345 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~-----l~s~s~dg~i~iwd~~~~~~--~~~~ 345 (515)
...+++.++.....++-.|++.|+.+....-|.. |+-+.+.|+.+ . -+.|-.|..|.-||.+-... +...
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~ 422 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV 422 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence 3445555655677899999999999999987776 78888888754 2 23466788999999884332 1111
Q ss_pred -----ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEE
Q psy6127 346 -----QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIR 420 (515)
Q Consensus 346 -----~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~ 420 (515)
.....-.|.+-..+ .++++|+.+|.|++||--. .. ......+-..+|..+..+.+|++|+..+ +..+.
T Consensus 423 q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~-~~----AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLl 495 (644)
T KOG2395|consen 423 QSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRIG-RR----AKTALPGLGDAIKHVDVTADGKWILATC-KTYLL 495 (644)
T ss_pred eccccccccccceeeecCC-ceEEEeecCCcEEeehhhh-hh----hhhcccccCCceeeEEeeccCcEEEEec-ccEEE
Confidence 11222344444444 4789999999999999732 21 2223445677899999999999987654 45666
Q ss_pred EEEC
Q psy6127 421 LFDA 424 (515)
Q Consensus 421 iwd~ 424 (515)
+.++
T Consensus 496 Li~t 499 (644)
T KOG2395|consen 496 LIDT 499 (644)
T ss_pred EEEE
Confidence 6664
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.2 Score=53.50 Aligned_cols=286 Identities=14% Similarity=0.113 Sum_probs=158.1
Q ss_pred cCCcEEEEEEcCC--C----CEEEEEeCCCeEEEEEC-CCCeeeeE--ecC--CCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 220 NTDKINSLDYSSD--G----SLLISCSDDDQIIIYDC-EQGTSKNT--INS--KKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 220 h~~~I~~l~~spd--~----~~lasgs~dg~i~iwd~-~~~~~~~~--~~~--~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
-...|.|+.++|- + +++|.|..+..+.+--. .+...... +.+ -...|....|-.+..+++++. .||.
T Consensus 529 ~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlval--gdG~ 606 (1096)
T KOG1897|consen 529 FEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVAL--GDGA 606 (1096)
T ss_pred ecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEc--CCce
Confidence 3578999999983 2 37888988776655433 22322221 111 124455666666677777776 4888
Q ss_pred EEEEE--CCCCeeeEEe--cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCC--CCE
Q psy6127 289 LRYLS--LHDNKYVRYF--PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE--GLA 362 (515)
Q Consensus 289 v~vwd--~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~--~~~ 362 (515)
+..+. ..++..-..- .-...++.--.|+..++.-+-+..|+-..+|.-+..-+...+....--..+.|+.+ +..
T Consensus 607 l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~ 686 (1096)
T KOG1897|consen 607 LLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDS 686 (1096)
T ss_pred EEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEeccchHHhhhhcccccccCCce
Confidence 77654 4455432221 22345666667776666555556667767776554433333333321222333322 233
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC--------------CcEEEEECCCCc
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG--------------SIIRLFDAFNGN 428 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d--------------g~i~iwd~~~~~ 428 (515)
++.+ ..+.+++.-+..-++...+... -....+.+++.+....+.+.+.. ..++++|-.+.+
T Consensus 687 l~~~-~~~~l~i~tid~iqkl~irtvp----l~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~ 761 (1096)
T KOG1897|consen 687 LASA-NGGALTIGTIDEIQKLHIRTVP----LGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFE 761 (1096)
T ss_pred EEEe-cCCceEEEEecchhhcceeeec----CCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCcee
Confidence 4443 4567777777654433333322 12234578887755455444321 135667766655
Q ss_pred eeEEeecccc-CCCCCEEEEEecC-CCEEEEEe----------CCCcEEEEECCCCeEEEEEcC-CCCCCeEEEEECCCC
Q psy6127 429 CVQSLSGVLN-NNASPLEATFTPD-SQFVASGS----------TDGQVHIWNAERGYKVCVLDG-DHPSAVQSLQFNPKY 495 (515)
Q Consensus 429 ~~~~~~~~~~-~~~~i~~~~~sp~-g~~l~sgs----------~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~sp~~ 495 (515)
.+...+.... ....+.++.|..| +.++++|. ..|.|.++.+..+..+..... .-.+.+.++.-- +|
T Consensus 762 vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ng 840 (1096)
T KOG1897|consen 762 VLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NG 840 (1096)
T ss_pred EEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CC
Confidence 4433322111 1123566668877 67888775 247888988877433333311 134555555422 67
Q ss_pred CEEEEeeCCEEEEcCCCC
Q psy6127 496 HMLASACSNMAFWIPTLS 513 (515)
Q Consensus 496 ~~las~~~dv~iW~~~~~ 513 (515)
+++|+-+..++++++...
T Consensus 841 kllA~In~~vrLye~t~~ 858 (1096)
T KOG1897|consen 841 KLLAGINQSVRLYEWTTE 858 (1096)
T ss_pred eEEEecCcEEEEEEcccc
Confidence 888888888999998765
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.062 Score=52.57 Aligned_cols=228 Identities=15% Similarity=0.138 Sum_probs=110.3
Q ss_pred CCCEEEEEe-CCCeEEEEECCC----CeeeeEecC---CC----CceeEEEEecCCCeEEEEEeeCC----CeEEEEECC
Q psy6127 232 DGSLLISCS-DDDQIIIYDCEQ----GTSKNTINS---KK----YGVDLIKFTHSKTTAIHASTKVD----ATLRYLSLH 295 (515)
Q Consensus 232 d~~~lasgs-~dg~i~iwd~~~----~~~~~~~~~---~~----~~v~~~~~~~~~~~l~~~s~~~d----~~v~vwd~~ 295 (515)
+.++|+..+ ..+.|.|.|+.+ .+..+.+.. +. .....+...|+|..++++-|+.+ |.+.+.|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 457787777 668999999884 234444432 11 22334555678888887776554 468888888
Q ss_pred CCeeeEEecCC---CCCeEEEEEcCCCCEEEEEeC--------------------CCcEEEEEcCCCCeEEEEecCCC--
Q psy6127 296 DNKYVRYFPGH---VRKVSSLNLSPVDDSFISGSY--------------------DKTVRVWDLRQPNNVGMIQLSGN-- 350 (515)
Q Consensus 296 ~~~~~~~~~~h---~~~v~~l~~~~~~~~l~s~s~--------------------dg~i~iwd~~~~~~~~~~~~~~~-- 350 (515)
+.+........ ...-..+.|.|..+.++|... ..++.+||+.+.+.++++.....
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 88777766542 234567788888888888653 35799999999999999977642
Q ss_pred -eeEEEE--CCCCCEEEEEE-CCCcEEEEEe-ecCCCCCceeeecC----------------CCCCcCeEEEEEcCCCCE
Q psy6127 351 -KPIAAY--DPEGLAFAIGV-NSDSIKLYDV-RSYDKGPFASFKCP----------------GERGCEWTGLKFSPDGKL 409 (515)
Q Consensus 351 -~~~~~~--s~~~~~l~~g~-~dg~i~i~d~-~~~~~~~~~~~~~~----------------~~~~~~i~~l~~sp~~~~ 409 (515)
+-.+.| .|+..+=.+|+ -.++|..|-- ..+.......+... .....-|+.|..|.|.++
T Consensus 246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf 325 (461)
T PF05694_consen 246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF 325 (461)
T ss_dssp EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence 223444 45555533332 3444443332 32221111111111 111245789999999999
Q ss_pred EEEEE-CCCcEEEEECCCCceeEEeec-ccc---------------CCCCCEEEEEecCCCEEEEEe
Q psy6127 410 ILVST-NGSIIRLFDAFNGNCVQSLSG-VLN---------------NNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 410 l~~~s-~dg~i~iwd~~~~~~~~~~~~-~~~---------------~~~~i~~~~~sp~g~~l~sgs 459 (515)
|.+++ ..|.++.||+......+.... ..+ -.+...-+..|-||+.|+..+
T Consensus 326 LYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 326 LYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp EEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred EEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 98777 689999999987543322210 000 011246678888998887653
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.016 Score=45.34 Aligned_cols=100 Identities=18% Similarity=0.225 Sum_probs=68.2
Q ss_pred eEEEEEcC---CC-CEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 310 VSSLNLSP---VD-DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 310 v~~l~~~~---~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
|+++++.. || +.|+.||.|..|++|+- .+.+..+...+.+.+++-... ..++.+..+|+|-+|+-...
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R----- 73 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQR----- 73 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeCcce-----
Confidence 55666544 33 47999999999999974 467777777777888877766 67899999999999986441
Q ss_pred eeeecCCCCCcCeEEEEEcC-C--C-CEEEEEECCCcEE
Q psy6127 386 ASFKCPGERGCEWTGLKFSP-D--G-KLILVSTNGSIIR 420 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp-~--~-~~l~~~s~dg~i~ 420 (515)
..+.... ..+.++++.. + | .-|++|-.+|.|-
T Consensus 74 -lWRiKSK--~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 74 -LWRIKSK--NQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -eeeeccC--CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 2222222 2244555443 3 2 3688888888764
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00077 Score=67.34 Aligned_cols=92 Identities=15% Similarity=0.166 Sum_probs=76.7
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeE-EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS-SLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 342 (515)
..+.-+.|+|.-+.+++++ .+|.+.+..+. -+.+.+++-|...++ +++|.|||+.|+.|-.||+|++.|+.++..+
T Consensus 21 ~~i~~~ewnP~~dLiA~~t--~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRT--EKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred cceEEEEEcCccchhheec--cCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 4578899999999888887 58999998887 677778877777777 9999999999999999999999999999888
Q ss_pred EE--EecCCCeeEEEECC
Q psy6127 343 GM--IQLSGNKPIAAYDP 358 (515)
Q Consensus 343 ~~--~~~~~~~~~~~~s~ 358 (515)
.. +.....+.+.-|++
T Consensus 98 ~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 98 VSFLFSVETDISKGIWDR 115 (665)
T ss_pred eccccccccchheeeccc
Confidence 77 44455566677763
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.085 Score=48.59 Aligned_cols=173 Identities=14% Similarity=0.191 Sum_probs=111.4
Q ss_pred ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC-CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy6127 259 INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH-VRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337 (515)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~ 337 (515)
+.+....+.++.|+|+.+.+++.+ ....-.|+=-.+|+.++++.-. -...-.+.+..+|++.++--.++.+.++.+.
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~--n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd 158 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVT--NKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVD 158 (316)
T ss_pred cccccccccceeeCCCcceEEEec--CCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence 345556699999999999998887 3555555555678888776421 2334567888878888887788999888877
Q ss_pred CCCeEEE-----Eec------CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-CCC----CCcCeEEE
Q psy6127 338 QPNNVGM-----IQL------SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-PGE----RGCEWTGL 401 (515)
Q Consensus 338 ~~~~~~~-----~~~------~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~----~~~~i~~l 401 (515)
....+.. +.. +..-..++|+|..+.|..+-+..-+.||.+............. +.. .-..+.++
T Consensus 159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl 238 (316)
T COG3204 159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGL 238 (316)
T ss_pred CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccc
Confidence 6533221 111 2335679999999999999888888888887433211111111 111 12346688
Q ss_pred EEcCC-CCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 402 KFSPD-GKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 402 ~~sp~-~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
.|++. +..++-+.+++.+.-.|. .|..+..+.
T Consensus 239 ~~~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~ls 271 (316)
T COG3204 239 EFNAITNSLLVLSDESRRLLEVDL-SGEVIELLS 271 (316)
T ss_pred eecCCCCcEEEEecCCceEEEEec-CCCeeeeEE
Confidence 89874 455566667777777774 444444443
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00042 Score=42.51 Aligned_cols=39 Identities=31% Similarity=0.588 Sum_probs=34.4
Q ss_pred CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy6127 297 NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335 (515)
Q Consensus 297 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd 335 (515)
+++...+..|...|.++.|.+++..+++++.|+.+++||
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345666778999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.039 Score=50.64 Aligned_cols=190 Identities=13% Similarity=0.122 Sum_probs=110.1
Q ss_pred ceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCeeeEEecCCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE
Q psy6127 265 GVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKYVRYFPGHV-RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 342 (515)
-...+.|..++. ++-.+|- ....|+.+|+.+++......-.. ----.++... ++...-.=.++...+||.++.+.+
T Consensus 46 FTQGL~~~~~g~-LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~f~yd~~tl~~~ 123 (264)
T PF05096_consen 46 FTQGLEFLDDGT-LYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTGFVYDPNTLKKI 123 (264)
T ss_dssp EEEEEEEEETTE-EEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEEEEEETTTTEEE
T ss_pred cCccEEecCCCE-EEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeEEEEccccceEE
Confidence 345677766653 4444432 23479999999998765543221 1223344442 233334446789999999999999
Q ss_pred EEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy6127 343 GMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLF 422 (515)
Q Consensus 343 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iw 422 (515)
..+...+.-..++ .+++.|+....+..++.+|..+.+..........+..-..++.+.|- +|...|=.-....|...
T Consensus 124 ~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~I 200 (264)
T PF05096_consen 124 GTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRI 200 (264)
T ss_dssp EEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEE
Confidence 9998887777777 46777888777888999887765432222222222333345667775 55554444466778889
Q ss_pred ECCCCceeEEeecc------------ccCCCCCEEEEEecCCCEEEEEe
Q psy6127 423 DAFNGNCVQSLSGV------------LNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 423 d~~~~~~~~~~~~~------------~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
|..+|+....+... .....-.+.+|+.|..+.++..+
T Consensus 201 dp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 201 DPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp ETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred eCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 99999887765311 00123368899999876555444
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.06 Score=49.40 Aligned_cols=201 Identities=16% Similarity=0.178 Sum_probs=124.8
Q ss_pred eeEEecCCC--CCeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCCeEEEEecCCCe--eEEEECCCCCEEEEEECCCcE
Q psy6127 299 YVRYFPGHV--RKVSSLNLSPVDDSFISGSYDK--TVRVWDLRQPNNVGMIQLSGNK--PIAAYDPEGLAFAIGVNSDSI 372 (515)
Q Consensus 299 ~~~~~~~h~--~~v~~l~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~--~~~~~s~~~~~l~~g~~dg~i 372 (515)
.+.+++ |+ .-...+.|..+|.++-+.+.-| .|+.+|+.+++.......+... ..++... ++.....-.++..
T Consensus 35 vv~~yp-Hd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~ 112 (264)
T PF05096_consen 35 VVETYP-HDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTG 112 (264)
T ss_dssp EEEEEE---TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEE
T ss_pred EEEECC-CCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeE
Confidence 345554 33 3456788877788888888766 6999999999988777665443 2344442 3333444578899
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc--CCCCCEEEEEec
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN--NNASPLEATFTP 450 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp 450 (515)
.+||..+.+ ....+.... .=..++ .+++.|+.+.....++++|..+.+..+.+....+ ....++.+.|-
T Consensus 113 f~yd~~tl~--~~~~~~y~~----EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i- 183 (264)
T PF05096_consen 113 FVYDPNTLK--KIGTFPYPG----EGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI- 183 (264)
T ss_dssp EEEETTTTE--EEEEEE-SS----S--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-
T ss_pred EEEccccce--EEEEEecCC----cceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-
Confidence 999998743 222332221 223666 4677888887788999999988887777664322 22335667776
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcC-----------CC---CCCeEEEEECCCCCEEEEeeCC-EEEEcC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDG-----------DH---PSAVQSLQFNPKYHMLASACSN-MAFWIP 510 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~-----------~h---~~~V~~l~~sp~~~~las~~~d-v~iW~~ 510 (515)
+|...|-.-....|...|..+|+....+.- .+ .+-.+.+||.|+...+...+.. =++|.+
T Consensus 184 ~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp~lyeV 258 (264)
T PF05096_consen 184 NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWPKLYEV 258 (264)
T ss_dssp TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-SEEEEE
T ss_pred cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCCceEEE
Confidence 677777676777899999999999887631 01 3457999999977766666554 344443
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.3 Score=52.51 Aligned_cols=245 Identities=11% Similarity=0.092 Sum_probs=125.3
Q ss_pred CcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC----CCeEEEE
Q psy6127 222 DKINSLDYSSDGSLLISCSDD-----DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV----DATLRYL 292 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~----d~~v~vw 292 (515)
-.+..+.+||||++|+.+.+. ..+++-|+.+|+.+...-... -..++|.++++.+++..... ...|+.+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 456778899999998876433 368899998886432221111 14599999999888876421 2478888
Q ss_pred ECCCC--eeeEEecCCCCCeE-EEEEcCCCCEEEEEeC---CCcEEEEEcC--CCCeEEEEecCCCeeEEEECCCCCEEE
Q psy6127 293 SLHDN--KYVRYFPGHVRKVS-SLNLSPVDDSFISGSY---DKTVRVWDLR--QPNNVGMIQLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 293 d~~~~--~~~~~~~~h~~~v~-~l~~~~~~~~l~s~s~---dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~ 364 (515)
++.++ +....+........ ....+.++++++..+. ++.+.+++.. .+.....+........-..+.. ..+.
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ly 283 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQ-HRFY 283 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCC-CEEE
Confidence 99887 33444443333333 3334447776554433 4578888853 3433333333332222222223 3333
Q ss_pred EEECC--CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CceeEEeeccccCCC
Q psy6127 365 IGVNS--DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-GNCVQSLSGVLNNNA 441 (515)
Q Consensus 365 ~g~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~ 441 (515)
.-+.. ...++..+.-........+. .......+..+.+..+ ..+++...++.-+++-+.. +..+..+.. ....
T Consensus 284 ~~tn~~~~~~~l~~~~~~~~~~~~~l~-~~~~~~~i~~~~~~~~-~l~~~~~~~g~~~l~~~~~~~~~~~~l~~--~~~~ 359 (686)
T PRK10115 284 LRSNRHGKNFGLYRTRVRDEQQWEELI-PPRENIMLEGFTLFTD-WLVVEERQRGLTSLRQINRKTREVIGIAF--DDPA 359 (686)
T ss_pred EEEcCCCCCceEEEecCCCcccCeEEE-CCCCCCEEEEEEEECC-EEEEEEEeCCEEEEEEEcCCCCceEEecC--CCCc
Confidence 33322 23344433321111111222 2222346777887733 3445555666555544332 223333321 0111
Q ss_pred CCEEEEEe--cCCC-EEEEEe---CCCcEEEEECCCCe
Q psy6127 442 SPLEATFT--PDSQ-FVASGS---TDGQVHIWNAERGY 473 (515)
Q Consensus 442 ~i~~~~~s--p~g~-~l~sgs---~dg~I~iwd~~~~~ 473 (515)
.+..+.++ +++. ++++.+ .-+.++.+|..+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 360 YVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred eEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 12223344 3433 444433 34678889988765
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.29 Score=52.23 Aligned_cols=268 Identities=15% Similarity=0.206 Sum_probs=152.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDC--EQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~--~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~ 298 (515)
.|.-..|-.|..+|.++..||.+.-+.+ .++..... ..-...++.--.|+..+...+++. .|.-..+|..+ ++
T Consensus 585 SIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~--sdrP~viY~~n-~k 661 (1096)
T KOG1897|consen 585 SILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFAL--SDRPTVIYSSN-GK 661 (1096)
T ss_pred heeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEe--CCCCEEEEecC-Cc
Confidence 4555566667889999999999887654 44443222 233456677777777766666655 36666666533 33
Q ss_pred eeE-EecCCCCCeEEE-EEcCC--CCEEEEEeCCCcEEEEEcCCCC--eEEEEecCCCeeEEEECCCCCEEEEEECC---
Q psy6127 299 YVR-YFPGHVRKVSSL-NLSPV--DDSFISGSYDKTVRVWDLRQPN--NVGMIQLSGNKPIAAYDPEGLAFAIGVNS--- 369 (515)
Q Consensus 299 ~~~-~~~~h~~~v~~l-~~~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~g~~d--- 369 (515)
.+. .+. -..+..+ .|+.+ ...++++. .+.+++.-++.-+ .+++...+.....+++.+....+.+.+..
T Consensus 662 Lv~spls--~kev~~~c~f~s~a~~d~l~~~~-~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~ 738 (1096)
T KOG1897|consen 662 LVYSPLS--LKEVNHMCPFNSDAYPDSLASAN-GGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIES 738 (1096)
T ss_pred EEEeccc--hHHhhhhcccccccCCceEEEec-CCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEeccccc
Confidence 221 111 1111111 12221 22455544 4566666555432 23446666777888888866555554421
Q ss_pred -----------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEE----------CCCcEEEEECCCC
Q psy6127 370 -----------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVST----------NGSIIRLFDAFNG 427 (515)
Q Consensus 370 -----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s----------~dg~i~iwd~~~~ 427 (515)
..++++|-++.+.-....+. .......+.+..|..| +.++++|+ ..|.|.+|.+..+
T Consensus 739 ~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~-~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~ 817 (1096)
T KOG1897|consen 739 SAEYYGEEYEVSFLRVLDQNTFEVLSSHEFE-RNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEEL 817 (1096)
T ss_pred chhhcCCcceEEEEEEecCCceeEEeecccc-ccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecC
Confidence 13555555543211000000 0111223445568777 67888776 2477888888775
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
+.++....+.- .+.+.++..- +|+++|. -+..|++|+..+.+.++.-.. |..++..+...-.|..++.|+
T Consensus 818 ~~L~~v~e~~v-~Gav~aL~~f-ngkllA~--In~~vrLye~t~~~eLr~e~~-~~~~~~aL~l~v~gdeI~VgD 887 (1096)
T KOG1897|consen 818 NSLELVAETVV-KGAVYALVEF-NGKLLAG--INQSVRLYEWTTERELRIECN-ISNPIIALDLQVKGDEIAVGD 887 (1096)
T ss_pred Cceeeeeeeee-ccceeehhhh-CCeEEEe--cCcEEEEEEccccceehhhhc-ccCCeEEEEEEecCcEEEEee
Confidence 55544433222 2223333221 4666654 467899999998877776655 888899999988899999887
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.14 Score=47.72 Aligned_cols=152 Identities=20% Similarity=0.275 Sum_probs=90.0
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEE-eecCCCCCce
Q psy6127 309 KVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYD-VRSYDKGPFA 386 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d-~~~~~~~~~~ 386 (515)
.+.+.+++++++.++... .++.-.+|-...+...............+|++++...+....+...+++. ...+... ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~-~~ 103 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE-PV 103 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce-eE
Confidence 688999999999776655 23333444444444333332334577789999988877777666767664 2222211 11
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEEE---CCCcEEEEECC---CC--cee-EEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVST---NGSIIRLFDAF---NG--NCV-QSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~s---~dg~i~iwd~~---~~--~~~-~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
......... .|+.+.+||||..++... .++.+.+--+. .+ ..+ ............+..++|.+++.+++.
T Consensus 104 ~v~~~~~~~-~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~ 182 (253)
T PF10647_consen 104 EVDWPGLRG-RITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVL 182 (253)
T ss_pred EecccccCC-ceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEE
Confidence 122111111 899999999999988766 34666665432 23 111 111111122345889999999988777
Q ss_pred EeCCC
Q psy6127 458 GSTDG 462 (515)
Q Consensus 458 gs~dg 462 (515)
+...+
T Consensus 183 ~~~~~ 187 (253)
T PF10647_consen 183 GRSAG 187 (253)
T ss_pred eCCCC
Confidence 66444
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.12 Score=47.40 Aligned_cols=237 Identities=10% Similarity=0.076 Sum_probs=134.4
Q ss_pred EEEEEcCC-CCEEEEEeCCCe-EEEEECCCCeeeeEecCCCCc--eeEEEEecCCCeEEEEEeeC---CCeEEEEECCCC
Q psy6127 225 NSLDYSSD-GSLLISCSDDDQ-IIIYDCEQGTSKNTINSKKYG--VDLIKFTHSKTTAIHASTKV---DATLRYLSLHDN 297 (515)
Q Consensus 225 ~~l~~spd-~~~lasgs~dg~-i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~s~~~---d~~v~vwd~~~~ 297 (515)
..++|+|. ..-++.+-.-|+ ..++|....+...++...++. --.-.|+|||..++..-.+. -|.|-+||.+.+
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~ 150 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG 150 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc
Confidence 35677774 345666655554 567888877766665433221 12235999998887654333 367999998754
Q ss_pred -eeeEEecCCCCCeEEEEEcCCCCEEEEEeC------------------CCcEEEEEcCCCCeEEEEecC-----CCeeE
Q psy6127 298 -KYVRYFPGHVRKVSSLNLSPVDDSFISGSY------------------DKTVRVWDLRQPNNVGMIQLS-----GNKPI 353 (515)
Q Consensus 298 -~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~------------------dg~i~iwd~~~~~~~~~~~~~-----~~~~~ 353 (515)
+.+..+..|.-....+.|.+||+.++.+.. .-++.+.|..+|+.+.+.... -++..
T Consensus 151 fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRH 230 (366)
T COG3490 151 FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRH 230 (366)
T ss_pred cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceee
Confidence 455677888888889999999998887642 123445555556555443222 23667
Q ss_pred EEECCCCCEEEEEECCCcE----EEEEeecCCCCCceeeecCC----CCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEEC
Q psy6127 354 AAYDPEGLAFAIGVNSDSI----KLYDVRSYDKGPFASFKCPG----ERGCEWTGLKFSPDGKLILVST-NGSIIRLFDA 424 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~dg~i----~i~d~~~~~~~~~~~~~~~~----~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~ 424 (515)
++..+||...+.+-..|.- -+.-.... ..+...+..+. .-...|-+++.+.+..+++..+ ..+...+||.
T Consensus 231 ld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~-g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da 309 (366)
T COG3490 231 LDIGRDGTVWFGCQYRGPRNDLPPLVGHFRK-GEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDA 309 (366)
T ss_pred eeeCCCCcEEEEEEeeCCCccCCcceeeccC-CCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEc
Confidence 7788887766554332210 00000000 00111111110 1122455788876655665555 5667889999
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
.+|..+..-.... ...++ +...-+++.+.+|.+.++.-
T Consensus 310 ~tG~vv~~a~l~d-----aaGva--~~~~gf~vssg~G~~~~~s~ 347 (366)
T COG3490 310 ATGAVVSEAALPD-----AAGVA--AAKGGFAVSSGQGRIIFYSR 347 (366)
T ss_pred CCCcEEecccccc-----cccce--eccCceEEecCCceEEeccc
Confidence 9998765443211 12222 23333555667888887743
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.02 Score=44.75 Aligned_cols=100 Identities=17% Similarity=0.152 Sum_probs=64.8
Q ss_pred EEEEEEcC---CC-CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 224 INSLDYSS---DG-SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 224 I~~l~~sp---d~-~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
|+++++.. || +.|+.||.|..||+|+- .+.+..+... ..|.++.-...+ .++++. .+|+|-+|+-.. .
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~-~~v~~L~~~~~~-~F~Y~l--~NGTVGvY~~~~--R 73 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITET-DKVTSLCSLGGG-RFAYAL--ANGTVGVYDRSQ--R 73 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecc-cceEEEEEcCCC-EEEEEe--cCCEEEEEeCcc--e
Confidence 66776655 33 57999999999999984 4566666544 567777766664 344444 699999998532 2
Q ss_pred eEEecCCCCCeEEEEEcCC---C-CEEEEEeCCCcEE
Q psy6127 300 VRYFPGHVRKVSSLNLSPV---D-DSFISGSYDKTVR 332 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~---~-~~l~s~s~dg~i~ 332 (515)
+...+. ...+.++++..- | +.|++|-.+|.|-
T Consensus 74 lWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 74 LWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 333332 233666665432 2 2688888888764
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.073 Score=52.83 Aligned_cols=201 Identities=11% Similarity=0.150 Sum_probs=106.6
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEe--cC------CCCceeEEEEec-----CC-
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI--NS------KKYGVDLIKFTH-----SK- 275 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~--~~------~~~~v~~~~~~~-----~~- 275 (515)
.+.+...++...++|++++.|.-| ++|.|..+|.+.|.|++....+..- .. ....++++.|.. |+
T Consensus 75 gf~P~~l~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~y 153 (395)
T PF08596_consen 75 GFLPLTLLDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGY 153 (395)
T ss_dssp EEEEEEEE---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSS
T ss_pred ccCchhheeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcc
Confidence 456667777779999999998544 9999999999999999876666542 11 234678888872 22
Q ss_pred CeEEEEEeeCCCeEEEEECC--C-Cee----eEEecCCCCCeEEEE-EcCCC--------------------CEEEEEeC
Q psy6127 276 TTAIHASTKVDATLRYLSLH--D-NKY----VRYFPGHVRKVSSLN-LSPVD--------------------DSFISGSY 327 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~--~-~~~----~~~~~~h~~~v~~l~-~~~~~--------------------~~l~s~s~ 327 (515)
..+.+..|...|.+.+|.+. . +.. ......+.++|..+. ++.+. +-++....
T Consensus 154 SSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvS 233 (395)
T PF08596_consen 154 SSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVS 233 (395)
T ss_dssp EEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-
T ss_pred cceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEc
Confidence 22334444578999999764 1 222 222234667776665 32221 22444555
Q ss_pred CCcEEEEEcCCCCeEEEEecCCCe--eEEEE-----CCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCC-CCCcCeE
Q psy6127 328 DKTVRVWDLRQPNNVGMIQLSGNK--PIAAY-----DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG-ERGCEWT 399 (515)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~-----s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~i~ 399 (515)
+..++++...+.+...... .... ..+++ ...+..|++-..+|.+++|.+...+ ......... .....+.
T Consensus 234 e~~irv~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lk--ei~~~~l~~~~d~~~~~ 310 (395)
T PF08596_consen 234 ESDIRVFKPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLK--EIKSVSLPPPLDSRRLS 310 (395)
T ss_dssp SSEEEEE-TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT----EEEEEE-SS---HHHHT
T ss_pred ccceEEEeCCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCch--HhhcccCCCcccccccc
Confidence 7889999998877665544 2212 23344 2356678888899999999987744 222222211 1122233
Q ss_pred EEEEcCCCCEEEEEE
Q psy6127 400 GLKFSPDGKLILVST 414 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s 414 (515)
..+++++|..++..+
T Consensus 311 ~ssis~~Gdi~~~~g 325 (395)
T PF08596_consen 311 SSSISRNGDIFYWTG 325 (395)
T ss_dssp T-EE-TTS-EEEE-S
T ss_pred ccEECCCCCEEEEeC
Confidence 566777887665544
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0013 Score=69.57 Aligned_cols=105 Identities=18% Similarity=0.282 Sum_probs=79.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCC
Q psy6127 406 DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA 485 (515)
Q Consensus 406 ~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 485 (515)
.+..++.|+..|.+-..|.... +..+........+|++++|+.+|+.++.|-.+|.|.+||+..++.++.+.. |..+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n--L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e-~~ap 174 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN--LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE-HGAP 174 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc--cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee-cCCc
Confidence 4567889999999998887543 222222333456799999999999999999999999999999998888876 6555
Q ss_pred eEEE---EECCCCCEEEEeeCCEEEEcCCCC
Q psy6127 486 VQSL---QFNPKYHMLASACSNMAFWIPTLS 513 (515)
Q Consensus 486 V~~l---~~sp~~~~las~~~dv~iW~~~~~ 513 (515)
.+++ .+..++..+.+++..+.+|.+..+
T Consensus 175 ~t~vi~v~~t~~nS~llt~D~~Gsf~~lv~n 205 (1206)
T KOG2079|consen 175 VTGVIFVGRTSQNSKLLTSDTGGSFWKLVFN 205 (1206)
T ss_pred cceEEEEEEeCCCcEEEEccCCCceEEEEec
Confidence 5554 445566678888877889987543
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.043 Score=57.39 Aligned_cols=230 Identities=13% Similarity=0.127 Sum_probs=123.0
Q ss_pred CCCEEEEEeCC------CeEEEEECCCCeeeeEecCC-CCceeEEEEecCCCeEEEEEeeCC------CeEEEEECCCCe
Q psy6127 232 DGSLLISCSDD------DQIIIYDCEQGTSKNTINSK-KYGVDLIKFTHSKTTAIHASTKVD------ATLRYLSLHDNK 298 (515)
Q Consensus 232 d~~~lasgs~d------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~~~d------~~v~vwd~~~~~ 298 (515)
.+.+++.|+.+ ..+..+|..+++........ ...-.+++...+ .+++++ +.| .++..||..+++
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~--~lYv~G-G~~~~~~~l~~ve~YD~~~~~ 360 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNG--KLYVVG-GYDSGSDRLSSVERYDPRTNQ 360 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECC--EEEEEc-cccCCCcccceEEEecCCCCc
Confidence 45567777766 46888888876443322211 122233333332 455554 455 467888888776
Q ss_pred eeEE--ecCCCCCeEEEEEcCCCCEEEEEeCCCc-----EEEEEcCCCCeEEEEecCCCeeE-EEECCCCCEEEEEECCC
Q psy6127 299 YVRY--FPGHVRKVSSLNLSPVDDSFISGSYDKT-----VRVWDLRQPNNVGMIQLSGNKPI-AAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 299 ~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~dg~-----i~iwd~~~~~~~~~~~~~~~~~~-~~~s~~~~~l~~g~~dg 370 (515)
-... +...........+ +|...+.||.||. +-.||.++.+....-........ -...-+|...++|+.++
T Consensus 361 W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~ 438 (571)
T KOG4441|consen 361 WTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDG 438 (571)
T ss_pred eeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCC
Confidence 4331 1111112222222 4778888998864 77788877665443322222222 22233777888887554
Q ss_pred ------cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC-----cEEEEECCCCceeEEeeccccC
Q psy6127 371 ------SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-----IIRLFDAFNGNCVQSLSGVLNN 439 (515)
Q Consensus 371 ------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg-----~i~iwd~~~~~~~~~~~~~~~~ 439 (515)
++..||..+........+....... +++.- ++...+.|+.|+ ++..||..+.+.... ......
T Consensus 439 ~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~----g~a~~-~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v-~~m~~~ 512 (571)
T KOG4441|consen 439 SSNCLNSVECYDPETNTWTLIAPMNTRRSGF----GVAVL-NGKIYVVGGFDGTSALSSVERYDPETNQWTMV-APMTSP 512 (571)
T ss_pred CccccceEEEEcCCCCceeecCCcccccccc----eEEEE-CCEEEEECCccCCCccceEEEEcCCCCceeEc-ccCccc
Confidence 5678888876654433333322221 22222 566677777665 377788877654433 111111
Q ss_pred CCCCEEEEEecCCCEEEEEeCCC-----cEEEEECCCCeE
Q psy6127 440 NASPLEATFTPDSQFVASGSTDG-----QVHIWNAERGYK 474 (515)
Q Consensus 440 ~~~i~~~~~sp~g~~l~sgs~dg-----~I~iwd~~~~~~ 474 (515)
...+..+. -+++..++|+.|| +|..||..+++-
T Consensus 513 rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W 550 (571)
T KOG4441|consen 513 RSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPETDTW 550 (571)
T ss_pred cccccEEE--ECCEEEEEecccCccccceeEEcCCCCCce
Confidence 11122222 2467778888776 477777766543
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.27 Score=53.04 Aligned_cols=232 Identities=17% Similarity=0.186 Sum_probs=123.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCc--------eeEEEEec----------------CCCeEEEEEeeCCCe
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG--------VDLIKFTH----------------SKTTAIHASTKVDAT 288 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~~~----------------~~~~l~~~s~~~d~~ 288 (515)
+..|+.++.++.|.-.|..+|+.+..+...... ...+++.. .+..+++.+ .|+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T--~Dg~ 271 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPT--SDAR 271 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEec--CCCe
Confidence 557788888899999999999998887543211 12233321 233555554 6999
Q ss_pred EEEEECCCCeeeEEecCCCCCeE-------------EEEEcC--CCCEEEEEeC----------CCcEEEEEcCCCCeEE
Q psy6127 289 LRYLSLHDNKYVRYFPGHVRKVS-------------SLNLSP--VDDSFISGSY----------DKTVRVWDLRQPNNVG 343 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~~h~~~v~-------------~l~~~~--~~~~l~s~s~----------dg~i~iwd~~~~~~~~ 343 (515)
+.-.|.++|+....+.. .+.|. .+.-.| .+..++.|+. +|.|+-+|.++|+.+-
T Consensus 272 LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W 350 (764)
T TIGR03074 272 LIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVW 350 (764)
T ss_pred EEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEee
Confidence 99999999998877632 22221 011111 1345666643 6889999999999988
Q ss_pred EEecCCCeeEEEECCCCCEEEEEECCC-cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy6127 344 MIQLSGNKPIAAYDPEGLAFAIGVNSD-SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLF 422 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~l~~g~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iw 422 (515)
.+....+... ..-+.+.....++.+. ...-+|.+.+. +........ ..+....+........+.|.-.
T Consensus 351 ~~~~g~p~~~-~~~~~g~~~~~gg~n~W~~~s~D~~~gl------vy~ptGn~~----pd~~g~~r~~~~n~y~~slvAL 419 (764)
T TIGR03074 351 AWDPGNPDPT-APPAPGETYTRNTPNSWSVASYDEKLGL------VYLPMGNQT----PDQWGGDRTPADEKYSSSLVAL 419 (764)
T ss_pred EEecCCCCcc-cCCCCCCEeccCCCCccCceEEcCCCCe------EEEeCCCcc----ccccCCccccCcccccceEEEE
Confidence 8754321111 0011232222121111 12222222210 000000000 0000000000001123456777
Q ss_pred ECCCCceeEEeecccc------CCCCCEEEEEec-CCC---EEEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 423 DAFNGNCVQSLSGVLN------NNASPLEATFTP-DSQ---FVASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 423 d~~~~~~~~~~~~~~~------~~~~i~~~~~sp-~g~---~l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
|.++|+..-.++.... ......-+.+.. +|+ .++.++.+|.+++.|.++|+.+...
T Consensus 420 D~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 420 DATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred eCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 8888877666654211 111122233333 563 8899999999999999999988754
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.057 Score=56.51 Aligned_cols=182 Identities=15% Similarity=0.207 Sum_probs=102.0
Q ss_pred CeEEEEECCCCeeeEEecC-CCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEcCCCCeEEEEecCCCeeEEEE-CC
Q psy6127 287 ATLRYLSLHDNKYVRYFPG-HVRKVSSLNLSPVDDSFISGSYD------KTVRVWDLRQPNNVGMIQLSGNKPIAAY-DP 358 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~-s~ 358 (515)
..+..+|..++.......- +...-.+++... +...++||.| .++..||.++.+....-.....-..... .-
T Consensus 301 ~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~-~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l 379 (571)
T KOG4441|consen 301 RSVECYDPKTNEWSSLAPMPSPRCRVGVAVLN-GKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVL 379 (571)
T ss_pred ceeEEecCCcCcEeecCCCCcccccccEEEEC-CEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEE
Confidence 5688899888754332221 222333444443 6788889888 3577889888875553333222222222 23
Q ss_pred CCCEEEEEECCC-----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC------cEEEEECCCC
Q psy6127 359 EGLAFAIGVNSD-----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS------IIRLFDAFNG 427 (515)
Q Consensus 359 ~~~~l~~g~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg------~i~iwd~~~~ 427 (515)
+|...++|+.|| ++..||..+.+......... .........+ +|...++|+.++ ++..||..+.
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~---~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~ 454 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT---RRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETN 454 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCCCCc---ceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCC
Confidence 778888898886 47778877755433332221 1111112222 677777777443 5778888777
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCc-----EEEEECCCCeEEEE
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ-----VHIWNAERGYKVCV 477 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~-----I~iwd~~~~~~~~~ 477 (515)
+....-...... . -..+ -.-++.+.+.|+.|+. |..||..+.+....
T Consensus 455 ~W~~~~~M~~~R-~-~~g~-a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v 506 (571)
T KOG4441|consen 455 TWTLIAPMNTRR-S-GFGV-AVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMV 506 (571)
T ss_pred ceeecCCccccc-c-cceE-EEECCEEEEECCccCCCccceEEEEcCCCCceeEc
Confidence 643322211111 1 1122 2235778888887763 77899887765554
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.045 Score=57.31 Aligned_cols=225 Identities=10% Similarity=0.042 Sum_probs=113.2
Q ss_pred eEEEEECCCCeeee--EecCCCCceeEEEEecCCCeEEEEEeeC-----CCeEEEEECCCCeeeEE--ecCCCCCeEEEE
Q psy6127 244 QIIIYDCEQGTSKN--TINSKKYGVDLIKFTHSKTTAIHASTKV-----DATLRYLSLHDNKYVRY--FPGHVRKVSSLN 314 (515)
Q Consensus 244 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~~~-----d~~v~vwd~~~~~~~~~--~~~h~~~v~~l~ 314 (515)
.+..||..+++-.. .+...... .+++. -++.+++++|.. -..+..||..++.-... +.........+
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~--l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~- 348 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIIN-YASAI--VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLA- 348 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccc-eEEEE--ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEE-
Confidence 56778887664322 22111111 11222 244566665421 14578889877753221 11111112222
Q ss_pred EcCCCCEEEEEeCCC-----cEEEEEcCCCCeEEEEecCCCee-EEEECCCCCEEEEEECCC------------------
Q psy6127 315 LSPVDDSFISGSYDK-----TVRVWDLRQPNNVGMIQLSGNKP-IAAYDPEGLAFAIGVNSD------------------ 370 (515)
Q Consensus 315 ~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~-~~~~s~~~~~l~~g~~dg------------------ 370 (515)
.-+|+..+.||.++ ++..||..+.+....-....+.. ..+..-+|...+.|+.++
T Consensus 349 -~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 349 -VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred -EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccccc
Confidence 22477777887754 47889988776544322222111 111123677777777542
Q ss_pred -----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC------CcEEEEECCC-Ccee--EEeecc
Q psy6127 371 -----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG------SIIRLFDAFN-GNCV--QSLSGV 436 (515)
Q Consensus 371 -----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d------g~i~iwd~~~-~~~~--~~~~~~ 436 (515)
.+..||..+........+..... .. +++. -+++..+.|+.+ ..+..||..+ .+.. ..+..
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~~r~---~~-~~~~-~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~- 501 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWTGTI---RP-GVVS-HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES- 501 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCcccc---cC-cEEE-ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc-
Confidence 46778877654332222211111 11 1221 255666666643 2467899886 4432 22221
Q ss_pred ccCCCCCEEEEEecCCCEEEEEeCCC--cEEEEECCCCeEEEEEcCCCCC
Q psy6127 437 LNNNASPLEATFTPDSQFVASGSTDG--QVHIWNAERGYKVCVLDGDHPS 484 (515)
Q Consensus 437 ~~~~~~i~~~~~sp~g~~l~sgs~dg--~I~iwd~~~~~~~~~~~~~h~~ 484 (515)
.......+++ +|++.++|+.+| .+..||..+.+-...... |..
T Consensus 502 --~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~-~~~ 546 (557)
T PHA02713 502 --RLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQ-HSN 546 (557)
T ss_pred --ccccceeEEE--CCEEEEEeeecceeehhhcCcccccccchhhh-cCC
Confidence 1111222222 688888999888 788899888776654444 543
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.014 Score=57.45 Aligned_cols=143 Identities=15% Similarity=0.227 Sum_probs=96.8
Q ss_pred EEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCE-------EEEEECCCcEEEEEeecCCCCCceeeec-CC
Q psy6127 321 SFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLA-------FAIGVNSDSIKLYDVRSYDKGPFASFKC-PG 392 (515)
Q Consensus 321 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~-------l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~ 392 (515)
.+.++.....++-.|++.|+.+.....+..++.+.+.|+.+. -+.|-.+..|.-||.|-........... ..
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 344555667788899999999999988887888888886532 2446678889999998654321111111 11
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE-eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS-LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
.......|.+-..+| ++++|+.+|.|++||- .+...++ +++ -..+|..+..+.+|++++..+ +..+.+.++
T Consensus 428 ~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPg---LG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 428 STKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPG---LGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred ccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccc---cCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 222344556555555 8999999999999996 5543333 333 444599999999999988654 555666554
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0042 Score=65.99 Aligned_cols=109 Identities=14% Similarity=0.200 Sum_probs=85.1
Q ss_pred EECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 355 AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 355 ~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
+..-.+..++.|+..|.+-..|+...- ..+.......++|++++|+.+|..++.|-.+|.|.+||+..++..+.+.
T Consensus 94 s~a~~~~~ivi~Ts~ghvl~~d~~~nL----~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~ 169 (1206)
T KOG2079|consen 94 SSAIVVVPIVIGTSHGHVLLSDMTGNL----GPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT 169 (1206)
T ss_pred eeeeeeeeEEEEcCchhhhhhhhhccc----chhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence 333355678899999999999887631 1222334567799999999999999999999999999999999999888
Q ss_pred ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 435 ~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
.+..+...+..+.+..++..+.++...|. +|.+
T Consensus 170 e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 170 EHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred ecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 77777666777777778888888877776 5543
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.2 Score=44.52 Aligned_cols=164 Identities=9% Similarity=0.051 Sum_probs=100.7
Q ss_pred eeeeCCCCcEEEEccceeeeeEeeeeccc-----cCCcEEEEEEcCCCCEEEEEeC-C---------CeEEEEECCCCee
Q psy6127 191 LAHSRSSRTITKCSENLVRSYRVAKVFRE-----NTDKINSLDYSSDGSLLISCSD-D---------DQIIIYDCEQGTS 255 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~~~~~~~~-----h~~~I~~l~~spd~~~lasgs~-d---------g~i~iwd~~~~~~ 255 (515)
.+.....+..|.-||...+.-+..+++.. .+.+.+.-..+|+|++.+ |.+ | |.++.|-.. ..
T Consensus 73 ~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~kknR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~--h~ 149 (310)
T KOG4499|consen 73 FAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDRKKNRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAG--HQ 149 (310)
T ss_pred EEEeecceEEEEEcccccceeeeeeeccccCchHHhcccccCccCCCCceee-eeeccccccccccccEEEEeccC--CC
Confidence 45556666777789865555555555322 145667777899999844 432 2 334444322 12
Q ss_pred eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE--CCCCee-----eEEecC----CCCCeEEEEEcCCCCEEEE
Q psy6127 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS--LHDNKY-----VRYFPG----HVRKVSSLNLSPVDDSFIS 324 (515)
Q Consensus 256 ~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd--~~~~~~-----~~~~~~----h~~~v~~l~~~~~~~~l~s 324 (515)
+..+...-.--+.++|..+.+.+++.- +.+-+|.-|| ..+|.. +..++. ..-..-.++...+|++.++
T Consensus 150 v~~i~~~v~IsNgl~Wd~d~K~fY~iD-sln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va 228 (310)
T KOG4499|consen 150 VELIWNCVGISNGLAWDSDAKKFYYID-SLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVA 228 (310)
T ss_pred ceeeehhccCCccccccccCcEEEEEc-cCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEE
Confidence 222222223346789998877776665 5678887787 555532 222221 1111233455667888888
Q ss_pred EeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECC
Q psy6127 325 GSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDP 358 (515)
Q Consensus 325 ~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~ 358 (515)
.-..++|.-.|..+|+.+..+..+ ..++++||--
T Consensus 229 ~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 229 TFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred EecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 888999999999999999888655 3477888853
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.094 Score=47.94 Aligned_cols=187 Identities=16% Similarity=0.212 Sum_probs=111.8
Q ss_pred EEcCCCCEEEEEeCC-----CeEEEEECCCC-eeeeEecCCCCceeEEEEecCCCeEEEEEee----------------C
Q psy6127 228 DYSSDGSLLISCSDD-----DQIIIYDCEQG-TSKNTINSKKYGVDLIKFTHSKTTAIHASTK----------------V 285 (515)
Q Consensus 228 ~~spd~~~lasgs~d-----g~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~----------------~ 285 (515)
.|||||.+|+..-.| |.|-|||...+ +.+..+..|.-....+.+.+||..++++.|+ .
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsM 199 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSM 199 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhc
Confidence 399999999876544 78999998753 4566778888888899999999999988652 1
Q ss_pred CCeEEEEECCCCeeeEE--ec--CCCCCeEEEEEcCCCCEEEEEeCCCc-----EEEEEcCCCCeEEEEecC--------
Q psy6127 286 DATLRYLSLHDNKYVRY--FP--GHVRKVSSLNLSPVDDSFISGSYDKT-----VRVWDLRQPNNVGMIQLS-------- 348 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~--~~--~h~~~v~~l~~~~~~~~l~s~s~dg~-----i~iwd~~~~~~~~~~~~~-------- 348 (515)
.-++.+.|..+|..+.+ +. .+.-.|..++..+||...+-+-..|. -.+=-...++.+..+...
T Consensus 200 ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~a 279 (366)
T COG3490 200 EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFA 279 (366)
T ss_pred CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHH
Confidence 23345556556655433 22 34556888888888875554433221 111122334444444322
Q ss_pred CCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 349 GNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 349 ~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
.-+-+++.+.+..+++..+ ..+...+||..++.......+. ....++- ...-+++.+.+|.+.++.
T Consensus 280 nYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~-------daaGva~--~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 280 NYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALP-------DAAGVAA--AKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred hhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccccc-------cccccee--ccCceEEecCCceEEecc
Confidence 2245677776666655555 4456788999987521111110 1112222 333466667778887764
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.47 Score=43.88 Aligned_cols=197 Identities=13% Similarity=0.184 Sum_probs=126.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC--CeeEEEECCCCCEEEEEECCCcEEEEEeecCC
Q psy6127 304 PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG--NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 304 ~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
.+-...+.++.|+|+.+.|++......-.++=...|+.+.+++..+ ....+.+..+|++.++--.++.+.++.+....
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 4455669999999999999988888888888778899998885543 35668888888888877778888888776542
Q ss_pred CCC-----ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee---ccccC----CCCCEEEEEe
Q psy6127 382 KGP-----FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS---GVLNN----NASPLEATFT 449 (515)
Q Consensus 382 ~~~-----~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~---~~~~~----~~~i~~~~~s 449 (515)
... ...+......+....+++|+|....++.+-+..-+.||.+..+....... .+... ...+..+.|+
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence 110 11112222336678899999999999988888778887765332111111 11110 1125677888
Q ss_pred cC-CCEEEEEeCCCcEEEEECCCCeEEEEEc---CCCC-----CCeEEEEECCCCCEEEEe
Q psy6127 450 PD-SQFVASGSTDGQVHIWNAERGYKVCVLD---GDHP-----SAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 450 p~-g~~l~sgs~dg~I~iwd~~~~~~~~~~~---~~h~-----~~V~~l~~sp~~~~las~ 501 (515)
+. +.+|+-+.+++.+.-.|.. |..+..+. +.|. ..-..++..++|.+-+++
T Consensus 242 ~~~~~LLVLS~ESr~l~Evd~~-G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvS 301 (316)
T COG3204 242 AITNSLLVLSDESRRLLEVDLS-GEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVS 301 (316)
T ss_pred CCCCcEEEEecCCceEEEEecC-CCeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEe
Confidence 75 4555556667777777764 44333332 2121 123467888887755544
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.56 Score=44.58 Aligned_cols=274 Identities=12% Similarity=0.153 Sum_probs=123.7
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-eEe--cCC---CCceeEEEEecCCCeEEEEEe
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-NTI--NSK---KYGVDLIKFTHSKTTAIHAST 283 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~-~~~--~~~---~~~v~~~~~~~~~~~l~~~s~ 283 (515)
.|+.+.. +-...+..|.|..+..-+++|. .+. |+...++-.. ... ... ......+.|.. +...+++
T Consensus 7 ~W~~v~l--~t~~~l~dV~F~d~~~G~~VG~-~g~--il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~--~~g~ivG- 78 (302)
T PF14870_consen 7 SWQQVSL--PTDKPLLDVAFVDPNHGWAVGA-YGT--ILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDG--NEGWIVG- 78 (302)
T ss_dssp -EEEEE---S-SS-EEEEEESSSS-EEEEET-TTE--EEEESSTTSS-EE-----S-----EEEEEEEET--TEEEEEE-
T ss_pred CcEEeec--CCCCceEEEEEecCCEEEEEec-CCE--EEEECCCCccccccccCCCccceeeEEEEEecC--CceEEEc-
Confidence 3444442 2345899999996566666654 464 3444333221 111 111 12356677754 3334333
Q ss_pred eCCCeEEEEECCCCeeeEEec---CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECC
Q psy6127 284 KVDATLRYLSLHDNKYVRYFP---GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDP 358 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~ 358 (515)
..+ +.+...+.|+.-..+. .-.+....+....++...+ ++..|.|.. ..+.|+.-... .....+..+..++
T Consensus 79 -~~g-~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~iy~-T~DgG~tW~~~~~~~~gs~~~~~r~~ 154 (302)
T PF14870_consen 79 -EPG-LLLHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGAIYR-TTDGGKTWQAVVSETSGSINDITRSS 154 (302)
T ss_dssp -ETT-EEEEESSTTSS-EE----TT-SS-EEEEEEEETTEEEE-EETT--EEE-ESSTTSSEEEEE-S----EEEEEE-T
T ss_pred -CCc-eEEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCcEEE-eCCCCCCeeEcccCCcceeEeEEECC
Confidence 244 3333334444322221 1123334444444443333 344454332 22334433333 2334577788899
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE-CCCCceeEE-eecc
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD-AFNGNCVQS-LSGV 436 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd-~~~~~~~~~-~~~~ 436 (515)
+|++++++.......-||-.... .... .......|..+.|+|++...+. ...|.++.=+ ....+.-.. +...
T Consensus 155 dG~~vavs~~G~~~~s~~~G~~~---w~~~--~r~~~~riq~~gf~~~~~lw~~-~~Gg~~~~s~~~~~~~~w~~~~~~~ 228 (302)
T PF14870_consen 155 DGRYVAVSSRGNFYSSWDPGQTT---WQPH--NRNSSRRIQSMGFSPDGNLWML-ARGGQIQFSDDPDDGETWSEPIIPI 228 (302)
T ss_dssp TS-EEEEETTSSEEEEE-TT-SS----EEE--E--SSS-EEEEEE-TTS-EEEE-ETTTEEEEEE-TTEEEEE---B-TT
T ss_pred CCcEEEEECcccEEEEecCCCcc---ceEE--ccCccceehhceecCCCCEEEE-eCCcEEEEccCCCCccccccccCCc
Confidence 99999888655555666643211 1122 2234568999999999876554 4888888876 222221111 1111
Q ss_pred ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC--CCCCCeEEEEECCCCCEEEEeeC
Q psy6127 437 LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG--DHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 437 ~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~sp~~~~las~~~ 503 (515)
......+..++|.+++...++|+ .|.+ +...+.|+.=..-+. .-....+.+.|.++.+-++.|..
T Consensus 229 ~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG~~ 295 (302)
T PF14870_consen 229 KTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLGQD 295 (302)
T ss_dssp SS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE-ST
T ss_pred ccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEECCC
Confidence 11223378999999988777665 4544 344455554433332 14556889999877676666653
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.69 Score=45.05 Aligned_cols=240 Identities=17% Similarity=0.186 Sum_probs=120.5
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee---eeEe----cCCCCceeEEEEecC---CCeEEEEEeeC-------
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS---KNTI----NSKKYGVDLIKFTHS---KTTAIHASTKV------- 285 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~l~~~s~~~------- 285 (515)
..++|+|.|||+++++ ...|.|++++ ..+.. +..+ .........++++|+ ...++++....
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 4588999999987765 5699999999 44443 2222 233467889999994 34555554311
Q ss_pred CCeEEEEECCCC-------eee-EEecC---CCCCeEEEEEcCCCCEEEEEeCCC-------------cEEEEEcCCCC-
Q psy6127 286 DATLRYLSLHDN-------KYV-RYFPG---HVRKVSSLNLSPVDDSFISGSYDK-------------TVRVWDLRQPN- 340 (515)
Q Consensus 286 d~~v~vwd~~~~-------~~~-~~~~~---h~~~v~~l~~~~~~~~l~s~s~dg-------------~i~iwd~~~~~- 340 (515)
+..|.-|....+ +.+ ..+.. ....-..|.|.|||.+.++.+..+ .|.-.+....-
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~p 160 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSIP 160 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB-
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCcCC
Confidence 124444544433 111 12222 234456799999998666655433 22222322110
Q ss_pred -----------eEEEE-ecCCCeeEEEECCC-CCEEEEE-ECCCcEEEEEeecCCC----------C-------------
Q psy6127 341 -----------NVGMI-QLSGNKPIAAYDPE-GLAFAIG-VNSDSIKLYDVRSYDK----------G------------- 383 (515)
Q Consensus 341 -----------~~~~~-~~~~~~~~~~~s~~-~~~l~~g-~~dg~i~i~d~~~~~~----------~------------- 383 (515)
....+ ........++|+|. |.++++= +.++.=.|.-+..+.. .
T Consensus 161 ~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~~~ 240 (331)
T PF07995_consen 161 ADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPSCP 240 (331)
T ss_dssp TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS-T
T ss_pred CCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccCCC
Confidence 00011 01112456899998 6555442 2233333333332210 0
Q ss_pred -CceeeecCCCCCcCeEEEEEcC-------CCCEEEEEECCCcEEEEECCCCceeEEeecc-ccCCCCCEEEEEecCCCE
Q psy6127 384 -PFASFKCPGERGCEWTGLKFSP-------DGKLILVSTNGSIIRLFDAFNGNCVQSLSGV-LNNNASPLEATFTPDSQF 454 (515)
Q Consensus 384 -~~~~~~~~~~~~~~i~~l~~sp-------~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~sp~g~~ 454 (515)
........ .+...+..+.|.+ .|.+++..-..+.|....+..+..+...... ......+..+++.|||.+
T Consensus 241 ~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~L 319 (331)
T PF07995_consen 241 GFVPPVFAY-PPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGAL 319 (331)
T ss_dssp TS---SEEE-TTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEE
T ss_pred CcCccceee-cCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeE
Confidence 00001111 1224556777764 3445655555678888887655433322222 223335899999999998
Q ss_pred EEEEeCCCcEE
Q psy6127 455 VASGSTDGQVH 465 (515)
Q Consensus 455 l~sgs~dg~I~ 465 (515)
.++-..+|.|+
T Consensus 320 yv~~d~~G~iy 330 (331)
T PF07995_consen 320 YVSDDSDGKIY 330 (331)
T ss_dssp EEEE-TTTTEE
T ss_pred EEEECCCCeEe
Confidence 88887888764
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.1 Score=54.64 Aligned_cols=219 Identities=10% Similarity=0.062 Sum_probs=107.2
Q ss_pred EEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCeeeeEecCCCCceeEEEEecC
Q psy6127 201 TKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD------DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 201 i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 274 (515)
+.++|.....|..+..+...... .+++. -++...+.||.+ ..+..||..++.-.. +..-..+....+...-
T Consensus 274 v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~-~~~m~~~R~~~~~~~~ 350 (557)
T PHA02713 274 ILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVE-LPPMIKNRCRFSLAVI 350 (557)
T ss_pred EEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEee-CCCCcchhhceeEEEE
Confidence 44555444455555444332221 12222 366777777753 347788887664321 1111111111111222
Q ss_pred CCeEEEEEeeCC-----CeEEEEECCCCeeeE--EecCCCCCeEEEEEcCCCCEEEEEeCCC------------------
Q psy6127 275 KTTAIHASTKVD-----ATLRYLSLHDNKYVR--YFPGHVRKVSSLNLSPVDDSFISGSYDK------------------ 329 (515)
Q Consensus 275 ~~~l~~~s~~~d-----~~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~s~dg------------------ 329 (515)
+..+++.+| .+ .++..||..+++-.. .+.........+.+ +|...+.||.++
T Consensus 351 ~g~IYviGG-~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 351 DDTIYAIGG-QNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred CCEEEEECC-cCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCccccccccccccccccccc
Confidence 345555554 33 358889988765332 22211111222222 477777777653
Q ss_pred -----cEEEEEcCCCCeEEEEecCCC-eeEEEECCCCCEEEEEECC------CcEEEEEeec-CCCCCceeeecCCCCCc
Q psy6127 330 -----TVRVWDLRQPNNVGMIQLSGN-KPIAAYDPEGLAFAIGVNS------DSIKLYDVRS-YDKGPFASFKCPGERGC 396 (515)
Q Consensus 330 -----~i~iwd~~~~~~~~~~~~~~~-~~~~~~s~~~~~l~~g~~d------g~i~i~d~~~-~~~~~~~~~~~~~~~~~ 396 (515)
.+..||.++.+....-....+ .......-+++..+.|+.+ ..+..||..+ .+......+.. ...
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~---~r~ 504 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES---RLS 504 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc---ccc
Confidence 477788877655433222111 1111223356777777654 2467788876 44332222221 111
Q ss_pred CeEEEEEcCCCCEEEEEECCC--cEEEEECCCCcee
Q psy6127 397 EWTGLKFSPDGKLILVSTNGS--IIRLFDAFNGNCV 430 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg--~i~iwd~~~~~~~ 430 (515)
....+.+ +++..++|+.++ .+..||..+.+..
T Consensus 505 ~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~ 538 (557)
T PHA02713 505 ALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWN 538 (557)
T ss_pred cceeEEE--CCEEEEEeeecceeehhhcCccccccc
Confidence 2222233 677888888777 6777777766543
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0034 Score=55.28 Aligned_cols=142 Identities=14% Similarity=0.112 Sum_probs=83.8
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEE--EecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeE
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGM--IQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWT 399 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~ 399 (515)
+..-+.||.|+-++++..+.... ..+... ...-.-+..+++|+.+|.|.+|........ .... .........
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~--~d~~-~s~~e~i~~ 106 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAH--SDRV-CSGEESIDL 106 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchH--HHhh-hccccccee
Confidence 44556788888887765432111 111111 222234567899999999999987732210 0111 111121222
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE--eCCCcEEEEECCC
Q psy6127 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG--STDGQVHIWNAER 471 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg--s~dg~I~iwd~~~ 471 (515)
.+.-..++.+..+++.+|.|+.|++..++.+.....|.. .+......+..+++++.+ |.|..++.|++..
T Consensus 107 ~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~--~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 107 GIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF--ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccccccccceeEEeccCCceeeeccccCceeeeeccccC--CCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 233333556788899999999999988887766655442 224455555566777777 7777788887754
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.62 E-value=1.4 Score=47.72 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=67.2
Q ss_pred CCeEEEEECCCCeeeeEecCC---------C--------Cce-eEEEEecCCCeEEEEEe----------------eCCC
Q psy6127 242 DDQIIIYDCEQGTSKNTINSK---------K--------YGV-DLIKFTHSKTTAIHAST----------------KVDA 287 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~---------~--------~~v-~~~~~~~~~~~l~~~s~----------------~~d~ 287 (515)
+|.|+-+|.++|+.+..+... . ..+ ..+++.+....+++.+| ...+
T Consensus 335 ~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~ 414 (764)
T TIGR03074 335 SGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSS 414 (764)
T ss_pred CcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccc
Confidence 688999999999998776421 0 011 23445555555554332 1346
Q ss_pred eEEEEECCCCeeeEEecCCCCCe---------EEEEEcC-CCC---EEEEEeCCCcEEEEEcCCCCeEEEE
Q psy6127 288 TLRYLSLHDNKYVRYFPGHVRKV---------SSLNLSP-VDD---SFISGSYDKTVRVWDLRQPNNVGMI 345 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~~h~~~v---------~~l~~~~-~~~---~l~s~s~dg~i~iwd~~~~~~~~~~ 345 (515)
.|.-.|.++|+....++.....+ .-+.+.. +|+ .++.++.+|.+.+.|.++|+.+...
T Consensus 415 slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 415 SLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred eEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 78888999999887775422111 1222322 553 7899999999999999999877543
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0088 Score=52.71 Aligned_cols=106 Identities=16% Similarity=0.261 Sum_probs=69.4
Q ss_pred CCEEEEEeCCCeEEEEECCC-CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC-CCe
Q psy6127 233 GSLLISCSDDDQIIIYDCEQ-GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV-RKV 310 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~-~~v 310 (515)
+..++.|+.+|.|.+|+..- +............+.++--.-+...+.+.+ ..++.|+.|++.-++.+.....|. .++
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~-~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVG-AQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEe-ccCCceeeeccccCceeeeeccccCCCc
Confidence 45688999999999998762 222222222233344333222222244443 479999999999998888877787 666
Q ss_pred EEEEEcCCCCEEEEE--eCCCcEEEEEcCCC
Q psy6127 311 SSLNLSPVDDSFISG--SYDKTVRVWDLRQP 339 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~--s~dg~i~iwd~~~~ 339 (515)
.....+..++.++.+ |.|..++.|++..-
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 666666667777777 77777788877643
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.56 Score=41.80 Aligned_cols=211 Identities=14% Similarity=0.110 Sum_probs=111.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeee-eEecCCCCceeEEEEe-cCCCeEEEEEeeCCCeEEEEECC--CCeeeEEecC----
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSK-NTINSKKYGVDLIKFT-HSKTTAIHASTKVDATLRYLSLH--DNKYVRYFPG---- 305 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~-~~~~~l~~~s~~~d~~v~vwd~~--~~~~~~~~~~---- 305 (515)
.++..--..|.|.-||....+.. .++.+.. ...+.+- .++...+.+.++..-.|.-||.. .....+++..
T Consensus 28 sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~--~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d 105 (310)
T KOG4499|consen 28 SLLYVDIEAGEVHRYDIEQNKVYRAKIEGPP--SAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPD 105 (310)
T ss_pred eEEEEEeccCceehhhhhhhheEEEEEecCc--ceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCch
Confidence 34444445566777888765432 2233321 2333332 22333333333334445567733 2233333211
Q ss_pred -CCCCeEEEEEcCCCCEEEEEeCC---------CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE-ECCCcEEE
Q psy6127 306 -HVRKVSSLNLSPVDDSFISGSYD---------KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG-VNSDSIKL 374 (515)
Q Consensus 306 -h~~~v~~l~~~~~~~~l~s~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i~i 374 (515)
...+.+.-..+|+|++++-.-.| |.++.|-.. ++.......-.-.+.++|+.+.+.+..- +.+-.|.-
T Consensus 106 ~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~-h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a 184 (310)
T KOG4499|consen 106 RKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG-HQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDA 184 (310)
T ss_pred HHhcccccCccCCCCceeeeeeccccccccccccEEEEeccC-CCceeeehhccCCccccccccCcEEEEEccCceEEee
Confidence 23456677889999984322222 334444322 1222222222224568888877766554 44556766
Q ss_pred EE--eecCCCCCceee---ecCCC-CCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 375 YD--VRSYDKGPFASF---KCPGE-RGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 375 ~d--~~~~~~~~~~~~---~~~~~-~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
|| ..++.......+ +.... .....-.++...+|+..++.-..++|...|..+|+.+.++..... .+++++|
T Consensus 185 ~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~---qitsccF 261 (310)
T KOG4499|consen 185 YDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTP---QITSCCF 261 (310)
T ss_pred eecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCC---ceEEEEe
Confidence 76 444332111111 11000 111122566677888888888999999999999999999887544 3899999
Q ss_pred ec
Q psy6127 449 TP 450 (515)
Q Consensus 449 sp 450 (515)
--
T Consensus 262 gG 263 (310)
T KOG4499|consen 262 GG 263 (310)
T ss_pred cC
Confidence 74
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=38.46 Aligned_cols=34 Identities=9% Similarity=0.358 Sum_probs=30.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS 255 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~ 255 (515)
...|.+++|+|...++|.|+.||.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 457999999999999999999999999998 5554
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.058 Score=58.12 Aligned_cols=147 Identities=15% Similarity=0.124 Sum_probs=97.9
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE-----Ee------cCCCCCeEEEEEcCCCC-EEEEEeCCCcE
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR-----YF------PGHVRKVSSLNLSPVDD-SFISGSYDKTV 331 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~-----~~------~~h~~~v~~l~~~~~~~-~l~s~s~dg~i 331 (515)
.++..+...+|+...++...+.+-.|..||+++-..-. -+ ........++.|+|.-. ..+....|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 45666777788877777776666689999987542211 11 11233456788888644 45667788998
Q ss_pred EEEEcCCCC-eEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEE
Q psy6127 332 RVWDLRQPN-NVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI 410 (515)
Q Consensus 332 ~iwd~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l 410 (515)
++..+.... ....+.......+++|+|.|+.++.|...|++.-|...-..+..+.+.. ......|.+++|-....++
T Consensus 181 ~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp--~~e~yrvl~v~Wl~t~efl 258 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPP--VEENYRVLSVTWLSTQEFL 258 (1405)
T ss_pred hhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCC--cCCCcceeEEEEecceeEE
Confidence 888765432 2334456666899999999999999999999998876543221111111 1225678999998877777
Q ss_pred EE
Q psy6127 411 LV 412 (515)
Q Consensus 411 ~~ 412 (515)
++
T Consensus 259 vv 260 (1405)
T KOG3630|consen 259 VV 260 (1405)
T ss_pred EE
Confidence 65
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.47 Score=46.96 Aligned_cols=149 Identities=17% Similarity=0.118 Sum_probs=79.7
Q ss_pred CeeEEEECCCCCEEEEEE-----------CCC-cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC
Q psy6127 350 NKPIAAYDPEGLAFAIGV-----------NSD-SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS 417 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~-----------~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg 417 (515)
....++|+++|+++++-. ..+ .|.+++-..+.......... .........+++.++| +++++...
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vf-a~~l~~p~Gi~~~~~G--lyV~~~~~ 91 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVF-AEELSMVTGLAVAVGG--VYVATPPD 91 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEe-ecCCCCccceeEecCC--EEEeCCCe
Confidence 367789999998877643 122 66666543322211111111 1112244689999998 44444443
Q ss_pred cEEEEECCC-----CceeEEeecccc----CCCCCEEEEEecCCCEEEEEeCC-------------------CcEEEEEC
Q psy6127 418 IIRLFDAFN-----GNCVQSLSGVLN----NNASPLEATFTPDSQFVASGSTD-------------------GQVHIWNA 469 (515)
Q Consensus 418 ~i~iwd~~~-----~~~~~~~~~~~~----~~~~i~~~~~sp~g~~l~sgs~d-------------------g~I~iwd~ 469 (515)
..++.|... ++....+.+... .......++|.|||.+.++-+.. |.|.-++.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p 171 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP 171 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence 333434421 122122222211 12336789999999876654421 44666666
Q ss_pred CCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 470 ERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 470 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
..++... +...+ ...+.++|+|+|.++++-.+
T Consensus 172 dg~~~e~-~a~G~-rnp~Gl~~d~~G~l~~tdn~ 203 (367)
T TIGR02604 172 DGGKLRV-VAHGF-QNPYGHSVDSWGDVFFCDND 203 (367)
T ss_pred CCCeEEE-EecCc-CCCccceECCCCCEEEEccC
Confidence 6555432 32213 34578999999998876443
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.32 Score=49.13 Aligned_cols=112 Identities=9% Similarity=0.145 Sum_probs=72.2
Q ss_pred CeEEEEEcCC----CCEEEEEECCCcEEEEECC-----CCceeEEeeccccCC--CCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 397 EWTGLKFSPD----GKLILVSTNGSIIRLFDAF-----NGNCVQSLSGVLNNN--ASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 397 ~i~~l~~sp~----~~~l~~~s~dg~i~iwd~~-----~~~~~~~~~~~~~~~--~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
.|.+++|.|- ...+++.-..+.|.+|.+. ..+.+..-....... --...+.|+|....|++-.....-.
T Consensus 58 hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV 137 (671)
T PF15390_consen 58 HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSV 137 (671)
T ss_pred eeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeE
Confidence 4678999984 3345555667889999875 223222222111111 1235688999999888776655444
Q ss_pred EEECCCC--eEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC---EEEEcC
Q psy6127 466 IWNAERG--YKVCVLDGDHPSAVQSLQFNPKYHMLASACSN---MAFWIP 510 (515)
Q Consensus 466 iwd~~~~--~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d---v~iW~~ 510 (515)
++++... +....+. ..+.|.|.+|.+||+.|+.+-|. -.|||=
T Consensus 138 ~~sV~~d~srVkaDi~--~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 138 LPSVHCDSSRVKADIK--TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred eeeeeeCCceEEEecc--CCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 5665433 3333343 67889999999999998887665 677763
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=96.01 E-value=1.8 Score=42.82 Aligned_cols=141 Identities=13% Similarity=0.103 Sum_probs=79.8
Q ss_pred CcEEEEEEcCCCCEEEEEe-----------CCC-eEEEEECCC--Ce--eeeEecCCCCceeEEEEecCCCeEEEEEeeC
Q psy6127 222 DKINSLDYSSDGSLLISCS-----------DDD-QIIIYDCEQ--GT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs-----------~dg-~i~iwd~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
.....|+|.++|+++++-. ..+ .|.+++-.+ |+ ....+...-.....+++.+++ ++++.
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~--- 88 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVAT--- 88 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeC---
Confidence 4567889999998776642 223 677776443 32 223443334456888998888 44443
Q ss_pred CCeEEEE-ECCCC-----e--ee-EEecC----CCCCeEEEEEcCCCCEEEEEeCC-------------------CcEEE
Q psy6127 286 DATLRYL-SLHDN-----K--YV-RYFPG----HVRKVSSLNLSPVDDSFISGSYD-------------------KTVRV 333 (515)
Q Consensus 286 d~~v~vw-d~~~~-----~--~~-~~~~~----h~~~v~~l~~~~~~~~l~s~s~d-------------------g~i~i 333 (515)
...|..+ |.... + .+ ..+.. +......++|.|||.+.++-+.. |.|.-
T Consensus 89 ~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r 168 (367)
T TIGR02604 89 PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFR 168 (367)
T ss_pred CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEE
Confidence 3345444 44221 1 11 22322 23457889999999866654421 34555
Q ss_pred EEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE
Q psy6127 334 WDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 334 wd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 367 (515)
+|..+++....-........++|+|+|+++++-.
T Consensus 169 ~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 169 YNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred EecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence 5655544322222223356799999998877643
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.23 Score=51.69 Aligned_cols=110 Identities=13% Similarity=0.114 Sum_probs=74.4
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe--cCCCEEEEEeCCCcEEEEECC-------
Q psy6127 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT--PDSQFVASGSTDGQVHIWNAE------- 470 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s--p~g~~l~sgs~dg~I~iwd~~------- 470 (515)
-+.-|.-++.-++-+....+.|||.+.+.....-. ......|.++.|. |+|+.+.+.+..+.|.+|--.
T Consensus 34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~--f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~ 111 (631)
T PF12234_consen 34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEES--FSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNK 111 (631)
T ss_pred eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeee--ecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcC
Confidence 45555555555555566689999998887433322 2334558888885 588888888889999998531
Q ss_pred --CCeEEEEEcC-CCC-CCeEEEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 471 --RGYKVCVLDG-DHP-SAVQSLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 471 --~~~~~~~~~~-~h~-~~V~~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
+..++..+.- .|+ .+|.+..|.++|.+++.++..+.|++-.
T Consensus 112 ~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sGNqlfv~dk~ 156 (631)
T PF12234_consen 112 GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSGNQLFVFDKW 156 (631)
T ss_pred CcccceeEEEEeecCCCCCccceeEecCCeEEEEeCCEEEEECCC
Confidence 1233333321 133 6799999999999888888778888654
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.023 Score=37.08 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=30.1
Q ss_pred CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 439 NNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
....|..++|+|...++|.|+.+|.|.+|.+ +++.
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 3445899999999999999999999999998 5554
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=3.1 Score=44.96 Aligned_cols=114 Identities=12% Similarity=0.084 Sum_probs=69.2
Q ss_pred CceeEEEEecCCCeEEEEE---eeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC------CcEEEE
Q psy6127 264 YGVDLIKFTHSKTTAIHAS---TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD------KTVRVW 334 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s---~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d------g~i~iw 334 (515)
-.+..+.++|+++.++++. |+....+++.|+.+++.+........ ..++|.+|++.|+....+ ..|..+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 3466788999999887764 22233688999988864322221222 469999999866655432 357778
Q ss_pred EcCCC--CeEEEEecC-CCee-EEEECCCCCEEEEEEC---CCcEEEEEeec
Q psy6127 335 DLRQP--NNVGMIQLS-GNKP-IAAYDPEGLAFAIGVN---SDSIKLYDVRS 379 (515)
Q Consensus 335 d~~~~--~~~~~~~~~-~~~~-~~~~s~~~~~l~~g~~---dg~i~i~d~~~ 379 (515)
++.++ +....+... .... ....+.++++++..+. ++.+.+++...
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~ 256 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAEL 256 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcC
Confidence 88887 333344322 2222 2334447877665543 35688888543
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.94 E-value=1.4 Score=40.97 Aligned_cols=151 Identities=15% Similarity=0.102 Sum_probs=92.9
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE-cCCCCeEE
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD-LRQPNNVG 343 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd-~~~~~~~~ 343 (515)
.+...+.++++..++++. ..++.-.+|-...+....... ....+..-.|++++...+....+...+++. ..++....
T Consensus 25 ~~~s~AvS~dg~~~A~v~-~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~ 102 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVS-EGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP 102 (253)
T ss_pred cccceEECCCCCeEEEEE-EcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence 688999999999888776 233433344333333333321 223688889999987766666666666663 33333222
Q ss_pred -EEe---cCCCeeEEEECCCCCEEEEEE---CCCcEEEEEeecCCCC-Cc---eeeecCCCCCcCeEEEEEcCCCCEEEE
Q psy6127 344 -MIQ---LSGNKPIAAYDPEGLAFAIGV---NSDSIKLYDVRSYDKG-PF---ASFKCPGERGCEWTGLKFSPDGKLILV 412 (515)
Q Consensus 344 -~~~---~~~~~~~~~~s~~~~~l~~g~---~dg~i~i~d~~~~~~~-~~---~~~~~~~~~~~~i~~l~~sp~~~~l~~ 412 (515)
... ....+..+.+||||..++... .++.+.+--+...... +. ............++.+.|.+++.+++.
T Consensus 103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~ 182 (253)
T PF10647_consen 103 VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVL 182 (253)
T ss_pred EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEE
Confidence 221 122689999999999988776 3577777766544333 11 111222233457889999999987776
Q ss_pred EECCC
Q psy6127 413 STNGS 417 (515)
Q Consensus 413 ~s~dg 417 (515)
+...+
T Consensus 183 ~~~~~ 187 (253)
T PF10647_consen 183 GRSAG 187 (253)
T ss_pred eCCCC
Confidence 65443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=95.89 E-value=1.7 Score=41.40 Aligned_cols=233 Identities=13% Similarity=0.110 Sum_probs=109.7
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec---CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN---SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
...++.|..+ ..+++| ..+ +.+...+.|+.-..+. .-......+....++ ...+++ ..|.|+.= .+.|+.
T Consensus 63 ~l~~I~f~~~-~g~ivG-~~g-~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~~--~~G~iy~T-~DgG~t 135 (302)
T PF14870_consen 63 HLNSISFDGN-EGWIVG-EPG-LLLHTTDGGKTWERVPLSSKLPGSPFGITALGDG-SAELAG--DRGAIYRT-TDGGKT 135 (302)
T ss_dssp EEEEEEEETT-EEEEEE-ETT-EEEEESSTTSS-EE----TT-SS-EEEEEEEETT-EEEEEE--TT--EEEE-SSTTSS
T ss_pred eEEEEEecCC-ceEEEc-CCc-eEEEecCCCCCcEEeecCCCCCCCeeEEEEcCCC-cEEEEc--CCCcEEEe-CCCCCC
Confidence 4667888654 344444 445 3344444444333322 112233344444443 333333 34444332 222322
Q ss_pred -eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-EEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEe
Q psy6127 300 -VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-GMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377 (515)
Q Consensus 300 -~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~ 377 (515)
......-.+.+..+.-++||+++++++......-||--..... ........+..+.|+|++.+.+.+ ..|.++.=+.
T Consensus 136 W~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~ 214 (302)
T PF14870_consen 136 WQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDD 214 (302)
T ss_dssp EEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-
T ss_pred eeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccC
Confidence 2223445577899999999998888877666677875543222 223445669999999998876655 8888887761
Q ss_pred ecCCCCCcee-eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 378 RSYDKGPFAS-FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 378 ~~~~~~~~~~-~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
.... ..... ..........+..++|.+++...++|+. |.+ +.....|+.-+.......-...+..+.|.++.+-++
T Consensus 215 ~~~~-~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~ 291 (302)
T PF14870_consen 215 PDDG-ETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV 291 (302)
T ss_dssp TTEE-EEE---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE
T ss_pred CCCc-cccccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEE
Confidence 1100 00001 1111122334778999998777776554 433 445566665555444333344478899987655555
Q ss_pred EEeCCCcEEEE
Q psy6127 457 SGSTDGQVHIW 467 (515)
Q Consensus 457 sgs~dg~I~iw 467 (515)
.| .+|.+--|
T Consensus 292 lG-~~G~ll~~ 301 (302)
T PF14870_consen 292 LG-QDGVLLRY 301 (302)
T ss_dssp E--STTEEEEE
T ss_pred EC-CCcEEEEe
Confidence 54 68876544
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.55 Score=49.24 Aligned_cols=176 Identities=9% Similarity=0.112 Sum_probs=88.0
Q ss_pred eEEEEECCCCeeeEEe--cCCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCCeEEEEecCCC--eeEEEECC
Q psy6127 288 TLRYLSLHDNKYVRYF--PGHVRKVSSLNLSPVDDSFISGSYD-----KTVRVWDLRQPNNVGMIQLSGN--KPIAAYDP 358 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~ 358 (515)
.+..||..+++....- .........+. -++..++.||.+ ..+..||..+.+....-....+ ..++ ...
T Consensus 312 ~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~-~~~ 388 (534)
T PHA03098 312 SVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCV-VNV 388 (534)
T ss_pred cEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceE-EEE
Confidence 5778888776543221 11111122222 246777778765 3477888887665432222111 1122 223
Q ss_pred CCCEEEEEECC------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC--------CcEEEEEC
Q psy6127 359 EGLAFAIGVNS------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG--------SIIRLFDA 424 (515)
Q Consensus 359 ~~~~l~~g~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d--------g~i~iwd~ 424 (515)
+++.++.|+.+ ..+..||..+........... ... .. +++. .++...+.|+.+ ..+.+||.
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~--~r~-~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 463 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPI--SHY-GG-CAIY-HDGKIYVIGGISYIDNIKVYNIVESYNP 463 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCc--ccc-Cc-eEEE-ECCEEEEECCccCCCCCcccceEEEecC
Confidence 56777777632 457888887654332221111 111 11 2222 255566666532 23888998
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeE
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYK 474 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~ 474 (515)
.+.+....-. ..........+. .++++++.|+.+ +.+.+||..+.+-
T Consensus 464 ~~~~W~~~~~-~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 464 VTNKWTELSS-LNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTNTW 515 (534)
T ss_pred CCCceeeCCC-CCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCCEE
Confidence 8765433211 111111112222 267777777654 4688899887654
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=95.75 E-value=1.9 Score=46.38 Aligned_cols=96 Identities=13% Similarity=0.250 Sum_probs=58.8
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ-GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~ 298 (515)
-.-.|..+.+||+|++||..|..| |.|-.+.. ......+.+....+.|-.+.-+..
T Consensus 83 ~~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~---------------------- 139 (717)
T PF10168_consen 83 PLFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDER---------------------- 139 (717)
T ss_pred CceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechh----------------------
Confidence 345789999999999999998866 44444432 111122333233333322211110
Q ss_pred eeEEecCCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEcCCCC
Q psy6127 299 YVRYFPGHVRKVSSLNLSPV---DDSFISGSYDKTVRVWDLRQPN 340 (515)
Q Consensus 299 ~~~~~~~h~~~v~~l~~~~~---~~~l~s~s~dg~i~iwd~~~~~ 340 (515)
.. ...+...|..+.|+|. +..|+.-..|+++++||+....
T Consensus 140 -~~-~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 140 -FF-TSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred -hc-cCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 00 1134567888999986 4688888999999999997543
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=95.56 E-value=2.6 Score=41.24 Aligned_cols=149 Identities=9% Similarity=0.057 Sum_probs=68.5
Q ss_pred CCCEEEEEeCC-------CeEEEEECCCCeeeeEecC---CCCceeEEEEecCCCeEEEEEeeC----CCeEEEEECCCC
Q psy6127 232 DGSLLISCSDD-------DQIIIYDCEQGTSKNTINS---KKYGVDLIKFTHSKTTAIHASTKV----DATLRYLSLHDN 297 (515)
Q Consensus 232 d~~~lasgs~d-------g~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~s~~~----d~~v~vwd~~~~ 297 (515)
++++.+.|+.+ ..+.+||..+.+-...-.. ........+...-+..+++.+|.. -..+.+||..+.
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 111 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKN 111 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCC
Confidence 34555555542 3577888776543221110 010011111222244555555421 135788998876
Q ss_pred eeeE--EecC---CCCCeEEEEEcCCCCEEEEEeCC-----------CcEEEEEcCCCCeEEEEecC----CC-eeEEEE
Q psy6127 298 KYVR--YFPG---HVRKVSSLNLSPVDDSFISGSYD-----------KTVRVWDLRQPNNVGMIQLS----GN-KPIAAY 356 (515)
Q Consensus 298 ~~~~--~~~~---h~~~v~~l~~~~~~~~l~s~s~d-----------g~i~iwd~~~~~~~~~~~~~----~~-~~~~~~ 356 (515)
+-.. .+.. ........+..-+++.++.|+.+ ..+.+||.++.+....-... .. ...++
T Consensus 112 ~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~- 190 (341)
T PLN02153 112 EWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFA- 190 (341)
T ss_pred EEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEE-
Confidence 5432 1110 11111222222346666777653 24778898876554322111 00 11122
Q ss_pred CCCCCEEEEEECC-------------CcEEEEEeecCC
Q psy6127 357 DPEGLAFAIGVNS-------------DSIKLYDVRSYD 381 (515)
Q Consensus 357 s~~~~~l~~g~~d-------------g~i~i~d~~~~~ 381 (515)
..+++.++.|+.+ ..+.+||..+..
T Consensus 191 ~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~ 228 (341)
T PLN02153 191 VVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGK 228 (341)
T ss_pred EECCeEEEEeccccccccCCccceecCceEEEEcCCCc
Confidence 2356666655432 457888887654
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.51 E-value=1.5 Score=44.52 Aligned_cols=150 Identities=14% Similarity=0.168 Sum_probs=92.3
Q ss_pred CceeEEEEecCCCeEEEEE-eeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCC----CEEEEEeCCCcEEEEEcCC
Q psy6127 264 YGVDLIKFTHSKTTAIHAS-TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD----DSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s-~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~----~~l~s~s~dg~i~iwd~~~ 338 (515)
.++..++|. ||+.+++.. --.+|.+++=| .+.+..| ..|..+.|.|-+ ..+.+.-....|.+|.+..
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd---s~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~ 91 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD---SKVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCP 91 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCC---ccEeecc----ceeeeeeecCcccCCCCceEEEeccceEEEEEecc
Confidence 567888886 444444332 11233333221 1223333 458999999853 3566667788999998752
Q ss_pred -----CCeEEEE--ecCCC----eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC
Q psy6127 339 -----PNNVGMI--QLSGN----KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG 407 (515)
Q Consensus 339 -----~~~~~~~--~~~~~----~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~ 407 (515)
++.+... ....+ ...+.|+|....|++-.....-.+++++.... ..+..-...+.|.+.+|.+||
T Consensus 92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~s----rVkaDi~~~G~IhCACWT~DG 167 (671)
T PF15390_consen 92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSS----RVKADIKTSGLIHCACWTKDG 167 (671)
T ss_pred CccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCc----eEEEeccCCceEEEEEecCcC
Confidence 2222221 22222 23578999999998887777767788876542 333333556789999999999
Q ss_pred CEEEEEECC-CcEEEEECC
Q psy6127 408 KLILVSTNG-SIIRLFDAF 425 (515)
Q Consensus 408 ~~l~~~s~d-g~i~iwd~~ 425 (515)
++|+++-.. =.-++||-.
T Consensus 168 ~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 168 QRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CEEEEEeCCeEEEEEecCc
Confidence 988776433 346788843
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.59 Score=48.99 Aligned_cols=189 Identities=13% Similarity=0.120 Sum_probs=90.8
Q ss_pred CCCCEEEEEeCCC------eEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeC----CCeEEEEECCCCe
Q psy6127 231 SDGSLLISCSDDD------QIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKV----DATLRYLSLHDNK 298 (515)
Q Consensus 231 pd~~~lasgs~dg------~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~----d~~v~vwd~~~~~ 298 (515)
.++..++.||.++ .+..||..+++.... +.........+. -+..+++.+|.. -..+..||..+++
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~---~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 369 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV---FNNRIYVIGGIYNSISLNTVESWKPGESK 369 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE---ECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence 3556677776542 577888876654321 111111112222 234566555432 2357788887765
Q ss_pred eeEEecC-CCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEcCCCCeEEEEecCCCe-eEEEECCCCCEEEEEECC-
Q psy6127 299 YVRYFPG-HVRKVSSLNLSPVDDSFISGSYD------KTVRVWDLRQPNNVGMIQLSGNK-PIAAYDPEGLAFAIGVNS- 369 (515)
Q Consensus 299 ~~~~~~~-h~~~v~~l~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~g~~d- 369 (515)
-...-.- +...-.+++ .-+++..+.||.+ ..+..||..+.+....-..+.+. ...+...++..++.|+.+
T Consensus 370 W~~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 448 (534)
T PHA03098 370 WREEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISY 448 (534)
T ss_pred eeeCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccC
Confidence 3321110 111111222 2246666777632 45788998876554332221111 112222356666776543
Q ss_pred -------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCc
Q psy6127 370 -------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNGN 428 (515)
Q Consensus 370 -------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~~ 428 (515)
..+.+||..+.+.......... ......+.+ +++.++.|+.+ +.+.+||..+.+
T Consensus 449 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 449 IDNIKVYNIVESYNPVTNKWTELSSLNFP---RINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred CCCCcccceEEEecCCCCceeeCCCCCcc---cccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 2378888877553322221111 111112222 56666666643 467778776654
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=1.1 Score=46.08 Aligned_cols=175 Identities=13% Similarity=0.093 Sum_probs=86.1
Q ss_pred CeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeCC--CcEEEEEcCCCCeEEEEecCCCe-eEEEECCCCC
Q psy6127 287 ATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSYD--KTVRVWDLRQPNNVGMIQLSGNK-PIAAYDPEGL 361 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~d--g~i~iwd~~~~~~~~~~~~~~~~-~~~~~s~~~~ 361 (515)
.++..||..+++.... +.........+ .-++...+.||.+ ..+..||..+++....-....+. ......-+|+
T Consensus 287 ~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v--~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~ 364 (480)
T PHA02790 287 NNAIAVNYISNNWIPIPPMNSPRLYASGV--PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNV 364 (480)
T ss_pred CeEEEEECCCCEEEECCCCCchhhcceEE--EECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCE
Confidence 3577788877654332 22111112222 2346677777754 35788888766544332222211 1122233677
Q ss_pred EEEEEECCC---cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc
Q psy6127 362 AFAIGVNSD---SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN 438 (515)
Q Consensus 362 ~l~~g~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 438 (515)
..+.|+.++ .+..||.++........... .......+. -+++..+.| |.+.+||..+.+....-. ...
T Consensus 365 IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~---~r~~~~~~~--~~~~IYv~G---G~~e~ydp~~~~W~~~~~-m~~ 435 (480)
T PHA02790 365 IYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY---PHYKSCALV--FGRRLFLVG---RNAEFYCESSNTWTLIDD-PIY 435 (480)
T ss_pred EEEecCcCCCCccEEEEeCCCCEEEeCCCCCC---ccccceEEE--ECCEEEEEC---CceEEecCCCCcEeEcCC-CCC
Confidence 778877543 46778877644322111111 111111222 255555555 357789987765432211 111
Q ss_pred CCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeE
Q psy6127 439 NNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYK 474 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~ 474 (515)
..... .++ .-+|++.+.||.+ ..+..||..+++-
T Consensus 436 ~r~~~-~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~W 474 (480)
T PHA02790 436 PRDNP-ELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTYSW 474 (480)
T ss_pred Ccccc-EEE-EECCEEEEECCcCCCcccceEEEEECCCCeE
Confidence 11112 222 2367777777754 3466777766543
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.19 Score=54.40 Aligned_cols=147 Identities=11% Similarity=0.054 Sum_probs=92.0
Q ss_pred eeEEEECCCCCEEEEEE--CCCcEEEEEeecCCCCCceeee------cCCCCCcCeEEEEEcCCCC-EEEEEECCCcEEE
Q psy6127 351 KPIAAYDPEGLAFAIGV--NSDSIKLYDVRSYDKGPFASFK------CPGERGCEWTGLKFSPDGK-LILVSTNGSIIRL 421 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~--~dg~i~i~d~~~~~~~~~~~~~------~~~~~~~~i~~l~~sp~~~-~l~~~s~dg~i~i 421 (515)
+..+...+|+...++.. .+-.|..||++........... ..........++.|+|.-. ..++...|+.|++
T Consensus 103 i~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V 182 (1405)
T KOG3630|consen 103 IVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRV 182 (1405)
T ss_pred ceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhh
Confidence 44456667766655543 3347899999875432211111 1112223345788888533 4556678888888
Q ss_pred EECCCCce-eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC---CCCCCeEEEEECCCCCE
Q psy6127 422 FDAFNGNC-VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG---DHPSAVQSLQFNPKYHM 497 (515)
Q Consensus 422 wd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~ 497 (515)
..+..... ...+. .....++++|+|.|+.++.|...|++.-|.. .++....+.. .....|.+|+|-....+
T Consensus 183 ~~~~~~~~~v~s~p----~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl~t~ef 257 (1405)
T KOG3630|consen 183 KSTKQLAQNVTSFP----VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWLSTQEF 257 (1405)
T ss_pred hhhhhhhhhhcccC----cccceeeEEeccccceeeEecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEecceeE
Confidence 77653322 12212 2223799999999999999999999998875 3444444433 12467999999998888
Q ss_pred EEEee
Q psy6127 498 LASAC 502 (515)
Q Consensus 498 las~~ 502 (515)
++.-+
T Consensus 258 lvvy~ 262 (1405)
T KOG3630|consen 258 LVVYG 262 (1405)
T ss_pred EEEec
Confidence 77643
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.39 E-value=1.6 Score=43.50 Aligned_cols=150 Identities=17% Similarity=0.165 Sum_probs=95.6
Q ss_pred EEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-------EEEEEeCCCcEEEEEcCCC-
Q psy6127 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-------SFISGSYDKTVRVWDLRQP- 339 (515)
Q Consensus 268 ~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-------~l~s~s~dg~i~iwd~~~~- 339 (515)
.+..+.+...+++..|.....++-.|++.|+.+....-|... -+.|.|+.+ .-+.|-.+..|.-.|.+-.
T Consensus 471 K~mlh~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~g 548 (776)
T COG5167 471 KIMLHDNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARG 548 (776)
T ss_pred hceeecCCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccC
Confidence 344444555666666667788999999999999999877765 577877532 1234555666666676543
Q ss_pred CeEEEEecCCCeeEEEE----CCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC
Q psy6127 340 NNVGMIQLSGNKPIAAY----DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN 415 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~----s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~ 415 (515)
..+.......-..--.| .....++++++..|.|++||--..+ ......+-+..|..+..+.+|+++++.+.
T Consensus 549 NKi~v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~r-----AKtalP~lG~aIk~idvta~Gk~ilaTCk 623 (776)
T COG5167 549 NKIKVVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKR-----AKTALPGLGDAIKHIDVTANGKHILATCK 623 (776)
T ss_pred CceeeeeehhccccccccccccccCceEEEecCCCceeeehhhcch-----hhhcCcccccceeeeEeecCCcEEEEeec
Confidence 23332222222222222 2355689999999999999965422 22223345567888999999999887665
Q ss_pred CCcEEEEECC
Q psy6127 416 GSIIRLFDAF 425 (515)
Q Consensus 416 dg~i~iwd~~ 425 (515)
..+.+-|++
T Consensus 624 -~yllL~d~~ 632 (776)
T COG5167 624 -NYLLLTDVP 632 (776)
T ss_pred -ceEEEEecc
Confidence 466676653
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=95.30 E-value=2.3 Score=39.03 Aligned_cols=188 Identities=15% Similarity=0.153 Sum_probs=121.2
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI 345 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 345 (515)
-..++-.|||..-+.+. ..+.+--.|..+|+....--+....-..+..-|||..-++-+.. -|.-.|-++.+....-
T Consensus 64 p~dvapapdG~VWft~q--g~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~ 140 (353)
T COG4257 64 PFDVAPAPDGAVWFTAQ--GTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFP 140 (353)
T ss_pred ccccccCCCCceEEecC--ccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEee
Confidence 44566677776555443 47778888888888776666666677788888998866654333 5666666665543321
Q ss_pred ----ecCCCeeEEEECCCCCEEEEEEC---------CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEE
Q psy6127 346 ----QLSGNKPIAAYDPEGLAFAIGVN---------SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILV 412 (515)
Q Consensus 346 ----~~~~~~~~~~~s~~~~~l~~g~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~ 412 (515)
..........|++.|++-.++.. .+.+++|+.. ....-..|+..|+|..-++
T Consensus 141 lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaP---------------qG~gpyGi~atpdGsvwya 205 (353)
T COG4257 141 LPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAP---------------QGGGPYGICATPDGSVWYA 205 (353)
T ss_pred cccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccC---------------CCCCCcceEECCCCcEEEE
Confidence 22344678899999999888752 1234444332 2223458999999998888
Q ss_pred EECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 413 STNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 413 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
.-.++.|-..|..++.. ..+............+--+|.|+.-++-...+.+..+|..+.
T Consensus 206 slagnaiaridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~ 264 (353)
T COG4257 206 SLAGNAIARIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVT 264 (353)
T ss_pred eccccceEEcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccc
Confidence 77788888888877733 233322221222455666777887777777777887776543
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=1.2 Score=45.77 Aligned_cols=183 Identities=10% Similarity=-0.046 Sum_probs=87.4
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCCCeeeE--
Q psy6127 232 DGSLLISCSDD-----DQIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHDNKYVR-- 301 (515)
Q Consensus 232 d~~~lasgs~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~~~~~~-- 301 (515)
++..++.||.+ .++..||..+++.... +.........+ .- +..+++++|. ...++..||..+++-..
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v--~~-~~~iYviGG~~~~~sve~ydp~~n~W~~~~ 347 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV--PA-NNKLYVVGGLPNPTSVERWFHGDAAWVNMP 347 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE--EE-CCEEEEECCcCCCCceEEEECCCCeEEECC
Confidence 45566777754 3577788876543322 22111111112 22 3455555542 22468888877664332
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEcCCCCeEEEEecCCCe-eEEEECCCCCEEEEEECCCcEEEEEe
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYDK---TVRVWDLRQPNNVGMIQLSGNK-PIAAYDPEGLAFAIGVNSDSIKLYDV 377 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~g~~dg~i~i~d~ 377 (515)
.+.........+ .-+|+..+.||.++ .+..||.++.+....-....+. ...+..-+++..+.| |.+.+||.
T Consensus 348 ~l~~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ydp 422 (480)
T PHA02790 348 SLLKPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RNAEFYCE 422 (480)
T ss_pred CCCCCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---CceEEecC
Confidence 222111111222 23477777777653 4778888876554432222111 112223356666666 45778888
Q ss_pred ecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCC
Q psy6127 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNG 427 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~ 427 (515)
++........+.. ..... +++. -+++..++|+.+ ..+..||..++
T Consensus 423 ~~~~W~~~~~m~~---~r~~~-~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 423 SSNTWTLIDDPIY---PRDNP-ELII-VDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred CCCcEeEcCCCCC---Ccccc-EEEE-ECCEEEEECCcCCCcccceEEEEECCCC
Confidence 7654332222211 11111 2222 256666666643 23555555444
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.17 E-value=1.8 Score=38.00 Aligned_cols=107 Identities=14% Similarity=-0.001 Sum_probs=66.3
Q ss_pred CCCEEEEEeCC--CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCC
Q psy6127 232 DGSLLISCSDD--DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRK 309 (515)
Q Consensus 232 d~~~lasgs~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~ 309 (515)
+|.++.+.+.- ..|++||+.+|+.+..-+-....+..=-...-++.+...+ -.+|....+|.++-+++..+. -.+.
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LT-w~egvaf~~d~~t~~~lg~~~-y~Ge 132 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLT-WKEGVAFKYDADTLEELGRFS-YEGE 132 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEE-eccceeEEEChHHhhhhcccc-cCCc
Confidence 56677776643 4799999999988766543322222222223355555555 468999999999888876664 3344
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE
Q psy6127 310 VSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 342 (515)
=+.++- |++.|+.++...+++.-|.++....
T Consensus 133 GWgLt~--d~~~LimsdGsatL~frdP~tfa~~ 163 (262)
T COG3823 133 GWGLTS--DDKNLIMSDGSATLQFRDPKTFAEL 163 (262)
T ss_pred ceeeec--CCcceEeeCCceEEEecCHHHhhhc
Confidence 455544 3555776666667777777654433
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.17 E-value=2.7 Score=39.03 Aligned_cols=196 Identities=11% Similarity=0.066 Sum_probs=114.9
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe--
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK-- 298 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~-- 298 (515)
.+-+..+.++. ++...+..+.-++|.|+.+......+..-.-.=..-.|.-.|++.+++. .|.-+.+.|+.+.+
T Consensus 86 ~~l~~Dv~vse--~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVad--lddgfLivdvsdpssP 161 (370)
T COG5276 86 RDLFADVRVSE--EYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVAD--LDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhhheeEecc--cEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEee--ccCcEEEEECCCCCCc
Confidence 44566677764 4666777777799999987654443322211122334455677776664 56777778876543
Q ss_pred -eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe---EEEEecCCCeeEEEECCCCCEEEEEECCCcEEE
Q psy6127 299 -YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN---VGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKL 374 (515)
Q Consensus 299 -~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i 374 (515)
....+......-+.++.+ |++-..+..|+-+.+-|+..... +..........++..+++..+++.. +--+.+
T Consensus 162 ~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy--~egvli 237 (370)
T COG5276 162 QLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVY--DEGVLI 237 (370)
T ss_pred eeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEc--ccceEE
Confidence 334455455555777887 78888888999999999976543 3344555457778888777666654 334556
Q ss_pred EEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy6127 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~ 427 (515)
-|..........-... ......++.+.. .+++......+.-+.+-|+.+.
T Consensus 238 vd~s~~ssp~~~gsye-t~~p~~~s~v~V--s~~~~Yvadga~gl~~idisnp 287 (370)
T COG5276 238 VDVSGPSSPTVFGSYE-TSNPVSISTVPV--SGEYAYVADGAKGLPIIDISNP 287 (370)
T ss_pred EecCCCCCceEeeccc-cCCcccccceec--ccceeeeeccccCceeEeccCC
Confidence 6665533211111110 111111222233 4556666666666777776654
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.16 E-value=2.7 Score=39.02 Aligned_cols=157 Identities=9% Similarity=0.032 Sum_probs=96.2
Q ss_pred EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
.+....-...+.++ +++...+..+.-++++|+.+.......... ...+. .-.|.-.|++..++.-|.-+.+.|
T Consensus 82 ~i~~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~l---nt~gy--aygv~vsGn~aYVadlddgfLivd 154 (370)
T COG5276 82 VINARDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFL---NTDGY--AYGVYVSGNYAYVADLDDGFLIVD 154 (370)
T ss_pred EEehhhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccc---cCCce--EEEEEecCCEEEEeeccCcEEEEE
Confidence 33444445556664 456666677888999999987643222211 11122 233444678888888666688889
Q ss_pred CCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC---eEEEEEcCCCCCCeEEEEECCCCCEEEE
Q psy6127 424 AFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG---YKVCVLDGDHPSAVQSLQFNPKYHMLAS 500 (515)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~---~~~~~~~~~h~~~V~~l~~sp~~~~las 500 (515)
+.+.+....-............++.| |++-..+..|+-+.+-|+... ..+.... ....+.++..+++..+++.
T Consensus 155 vsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n--~g~g~~sv~vsdnr~y~vv 230 (370)
T COG5276 155 VSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN--TGPGTYSVSVSDNRAYLVV 230 (370)
T ss_pred CCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEe--cCCceEEEEecCCeeEEEE
Confidence 87765432221111122223567776 777777778888999998764 3333332 3347889999999888887
Q ss_pred eeCCEEEEcCC
Q psy6127 501 ACSNMAFWIPT 511 (515)
Q Consensus 501 ~~~dv~iW~~~ 511 (515)
.+.-+.+-+.+
T Consensus 231 y~egvlivd~s 241 (370)
T COG5276 231 YDEGVLIVDVS 241 (370)
T ss_pred cccceEEEecC
Confidence 77655555544
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=95.09 E-value=2.8 Score=43.87 Aligned_cols=201 Identities=11% Similarity=0.113 Sum_probs=98.6
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE-E---ecCCCeeEEEECCCCC
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM-I---QLSGNKPIAAYDPEGL 361 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~-~---~~~~~~~~~~~s~~~~ 361 (515)
--.|+|++. +|+.+....-....+-.+.|+.+. .|++...||++.+|++-....... . .....+..+.+..+|-
T Consensus 63 ~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GV 140 (829)
T KOG2280|consen 63 RPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGV 140 (829)
T ss_pred ceeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCce
Confidence 455778875 455555444344478889999754 566778999999999854322210 1 1111233333333443
Q ss_pred EEEEEECCCcEEEE-EeecCCCCCceeeecCCCCCcCeEEEEEcCCCC---EEEEEE-CCCcEEEEECC--CCceeEEee
Q psy6127 362 AFAIGVNSDSIKLY-DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK---LILVST-NGSIIRLFDAF--NGNCVQSLS 434 (515)
Q Consensus 362 ~l~~g~~dg~i~i~-d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~---~l~~~s-~dg~i~iwd~~--~~~~~~~~~ 434 (515)
.+ -..+|.+.+- +..... ............+-++-...+++. .++--. ..+ ..++-.. +.+.. .+.
T Consensus 141 av--lt~~g~v~~i~~~~~~~---~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~-~~~ 213 (829)
T KOG2280|consen 141 AV--LTVSGQVILINGVEEPK---LRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLH-ALS 213 (829)
T ss_pred EE--EecCCcEEEEcCCCcch---hhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceeccccccc-ccC
Confidence 33 3344544432 222211 011110000000101111112211 111100 000 0111111 11111 111
Q ss_pred ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEE
Q psy6127 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHML 498 (515)
Q Consensus 435 ~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 498 (515)
.....+..+..||++++|+--..+|.|.+-+.+..++...+...-..+-..++|..+...+
T Consensus 214 ---~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~WcgndaVv 274 (829)
T KOG2280|consen 214 ---WPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGNDAVV 274 (829)
T ss_pred ---CCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecCCceE
Confidence 1224478899999999999999999999999888887777764222333467776654333
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=95.04 E-value=4 Score=40.36 Aligned_cols=186 Identities=12% Similarity=0.069 Sum_probs=90.8
Q ss_pred EcCCCCEEEEEeCC------CeEEEEECCCCeeeeEecCCC---CceeEEEEecCCCeEEEEEe----------------
Q psy6127 229 YSSDGSLLISCSDD------DQIIIYDCEQGTSKNTINSKK---YGVDLIKFTHSKTTAIHAST---------------- 283 (515)
Q Consensus 229 ~spd~~~lasgs~d------g~i~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~s~---------------- 283 (515)
--|+|+.++|+-.| |-+.+.|-++.+......... .--...-|.|..+.+++..-
T Consensus 137 clp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~ 216 (461)
T PF05694_consen 137 CLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLE 216 (461)
T ss_dssp E-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHH
T ss_pred ecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhh
Confidence 34688888876332 568888888777776665432 23455677777666554321
Q ss_pred --eCCCeEEEEECCCCeeeEEecCCC--CCeEEEEEcCCC--CE-EEEEeCCCcEEEEEc-CCCCeE--EEEec------
Q psy6127 284 --KVDATLRYLSLHDNKYVRYFPGHV--RKVSSLNLSPVD--DS-FISGSYDKTVRVWDL-RQPNNV--GMIQL------ 347 (515)
Q Consensus 284 --~~d~~v~vwd~~~~~~~~~~~~h~--~~v~~l~~~~~~--~~-l~s~s~dg~i~iwd~-~~~~~~--~~~~~------ 347 (515)
....++.+||+.+.+.++++.--. .....+.|..+. .+ ++.+.-.++|..|-- +.++.. ..+..
T Consensus 217 ~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~ 296 (461)
T PF05694_consen 217 AGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVE 296 (461)
T ss_dssp HH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--
T ss_pred cccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccC
Confidence 145789999999999999886433 346677776553 33 444444455555433 333321 11111
Q ss_pred --------------CCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCC--------------CCcCe
Q psy6127 348 --------------SGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGE--------------RGCEW 398 (515)
Q Consensus 348 --------------~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~--------------~~~~i 398 (515)
..-++.+.+|.|.++|.++. ..|.++.||+.........-....++ -.+..
T Consensus 297 ~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgP 376 (461)
T PF05694_consen 297 GWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGP 376 (461)
T ss_dssp SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S--
T ss_pred cccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCC
Confidence 12256788999999988776 58999999998754332211111110 11223
Q ss_pred EEEEEcCCCCEEEEEE
Q psy6127 399 TGLKFSPDGKLILVST 414 (515)
Q Consensus 399 ~~l~~sp~~~~l~~~s 414 (515)
.-+..|-||++|++.+
T Consensus 377 qMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 377 QMVQLSLDGKRLYVTN 392 (461)
T ss_dssp --EEE-TTSSEEEEE-
T ss_pred CeEEEccCCeEEEEEe
Confidence 4678888888887654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.03 E-value=1.7 Score=38.12 Aligned_cols=170 Identities=14% Similarity=0.121 Sum_probs=92.2
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEE
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 364 (515)
...|++||+.+++.+..-+-....+..=-...-+..+. -.=.+|.-..+|.++-+++..+...+.-..++- |+..++
T Consensus 67 ~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeGWgLt~--d~~~Li 144 (262)
T COG3823 67 FSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEGWGLTS--DDKNLI 144 (262)
T ss_pred cceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcceeeec--CCcceE
Confidence 56799999999987755432211111111111133332 233578888999999999888877776666654 555577
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc--------
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV-------- 436 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-------- 436 (515)
.+....+++.-|.++............+..-..++.+.|- +|...+-.-.+..|...+..+|+....+...
T Consensus 145 msdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~ 223 (262)
T COG3823 145 MSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNL 223 (262)
T ss_pred eeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCc
Confidence 7666667776666554322222222222222233334442 4444443334445566666677665544311
Q ss_pred -ccCCCCCEEEEEecCC-CEEEEE
Q psy6127 437 -LNNNASPLEATFTPDS-QFVASG 458 (515)
Q Consensus 437 -~~~~~~i~~~~~sp~g-~~l~sg 458 (515)
..+..-.+.+++.|++ +++++|
T Consensus 224 ~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 224 DKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cccccccccceeecCcCCeEEEec
Confidence 1122235778888887 455555
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=94.95 E-value=5.1 Score=42.06 Aligned_cols=260 Identities=9% Similarity=0.012 Sum_probs=126.6
Q ss_pred CcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 222 DKINSLDYSSDG-SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 222 ~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
+..-++..+|.. .-++ +.--.|+|++.. |..+..+.-....+-.+.|+.+...++ .. .+|++.+|++......
T Consensus 44 gGpIAV~r~p~~~~~~~--~a~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~-v~--k~g~v~Vy~~~ge~ie 117 (829)
T KOG2280|consen 44 GGPIAVTRSPSKLVPLY--SARPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELIC-VQ--KDGTVHVYGLLGEFIE 117 (829)
T ss_pred CCceEEEeccccccccc--ccceeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEE-Ee--ccceEEEeecchhhhc
Confidence 334455566522 1122 334568999975 777666655555888999998876544 43 7999999997543221
Q ss_pred EE---ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec-CC---CeeEEEECCCCC---EEEEEECCC
Q psy6127 301 RY---FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-SG---NKPIAAYDPEGL---AFAIGVNSD 370 (515)
Q Consensus 301 ~~---~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~---~~~~~~~s~~~~---~l~~g~~dg 370 (515)
.. +......|..+.+..+|-.+. ..+|.+.+-+-........++. +. +..+.+..+++. .++-....-
T Consensus 118 ~~svg~e~~~~~I~ec~~f~~GVavl--t~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v 195 (829)
T KOG2280|consen 118 SNSVGFESQMSDIVECRFFHNGVAVL--TVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAV 195 (829)
T ss_pred ccccccccccCceeEEEEecCceEEE--ecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhh
Confidence 11 122233455556655553333 3445444332221111222211 11 112222222211 111110000
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
-..++....... .........+.+..+..||+.++|+.-...|.|.+-+....++...+...... +...++|..
T Consensus 196 ~~~~~q~~~~~~----q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~--~p~qm~Wcg 269 (829)
T KOG2280|consen 196 GLHICQVEESRV----QLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHD--PPKQMAWCG 269 (829)
T ss_pred hhcccceecccc----cccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCC--chHhceeec
Confidence 011222222111 11111222356778999999999999999999999998877776666532211 133566664
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
+... +.+.+..+.+... .|..+.-+.. +.. . +.--+||-.+.+.+
T Consensus 270 ndaV--vl~~e~~l~lvgp-~gd~V~f~yd-~t~--~-l~~E~DGVRI~t~t 314 (829)
T KOG2280|consen 270 NDAV--VLSWEVNLMLVGP-PGDSVQFYYD-ETA--I-LSAEVDGVRIITST 314 (829)
T ss_pred CCce--EEEEeeeEEEEcC-CCCccccccC-CCc--e-eeeccCeeEEeccc
Confidence 4421 1222333333332 2333332322 222 2 55555776666654
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=94.92 E-value=7.1 Score=42.87 Aligned_cols=119 Identities=11% Similarity=0.160 Sum_probs=76.6
Q ss_pred CCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCc-----eeEEe---eccc----cCCCCCEEEEEecCCCEEEEEe
Q psy6127 393 ERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGN-----CVQSL---SGVL----NNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 393 ~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~-----~~~~~---~~~~----~~~~~i~~~~~sp~g~~l~sgs 459 (515)
..+.+...++|+| +.+.||+....|...||++.... ..... .+.- .....-..+.|.++-..|+.++
T Consensus 143 tgg~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~ 222 (765)
T PF10214_consen 143 TGGFPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN 222 (765)
T ss_pred cCCCccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc
Confidence 3445667899999 45689999999999999992111 11111 1111 1112235788988888888775
Q ss_pred CCCcEEEEECCCCeEEE-EEcCCCCCCeEEEEECCC--CCEEEEeeCCEEEEcCCC
Q psy6127 460 TDGQVHIWNAERGYKVC-VLDGDHPSAVQSLQFNPK--YHMLASACSNMAFWIPTL 512 (515)
Q Consensus 460 ~dg~I~iwd~~~~~~~~-~~~~~h~~~V~~l~~sp~--~~~las~~~dv~iW~~~~ 512 (515)
...+.++|+++..... .........|.++.-+|+ +..++-.+..+...++..
T Consensus 223 -r~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs~eiiw~~~~~ 277 (765)
T PF10214_consen 223 -RSKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTSKEIIWLDVKS 277 (765)
T ss_pred -CCceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEecCeEEEEEccC
Confidence 4568999998876633 222225578999999987 555555666665555544
|
These proteins are found in fungi. |
| >smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2 | Back alignment and domain information |
|---|
Probab=94.80 E-value=4 Score=39.12 Aligned_cols=235 Identities=12% Similarity=0.100 Sum_probs=119.0
Q ss_pred CCCEEEEEeCCCeEEEEECCC--CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee----------
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQ--GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY---------- 299 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~---------- 299 (515)
++++|+.|..+|. .+.+... ++..+.+ +...|.++...+..+.+++.++ ....++++++..-..
T Consensus 12 ~~~~lL~GTe~Gl-y~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsg-k~~~L~~~~L~~L~~~~~~~~~~~~ 87 (302)
T smart00036 12 DGKWLLVGTEEGL-YVLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISG-KKPQLYSHPLSALVEKKEALGSARL 87 (302)
T ss_pred CCcEEEEEeCCce-EEEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeC-CcceEEEEEHHHhhhhhhccCCccc
Confidence 3468999999994 4555554 2333333 3568999999999998888873 455699999743221
Q ss_pred -----eEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCC--C--eEEE-----EecCCCeeEEEECC--CCCE
Q psy6127 300 -----VRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQP--N--NVGM-----IQLSGNKPIAAYDP--EGLA 362 (515)
Q Consensus 300 -----~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~--~--~~~~-----~~~~~~~~~~~~s~--~~~~ 362 (515)
....-+|............. ..++++....+|.++..... + ..+. ...+.++..+..++ ....
T Consensus 88 ~~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (302)
T smart00036 88 VIRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPG 167 (302)
T ss_pred cccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceE
Confidence 01122344433333333222 23445555667777644322 1 1111 01112232333333 3567
Q ss_pred EEEEECCCcEEEEEeec--CCCCCc-eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-ceeEEeecccc
Q psy6127 363 FAIGVNSDSIKLYDVRS--YDKGPF-ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-NCVQSLSGVLN 438 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~--~~~~~~-~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~ 438 (515)
++.|+..+...++++.. ...... ...........++ ++..-+++.++++ -.+ ...+-|.. | ...+...- .
T Consensus 168 lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~-~i~~l~~~e~Llc-~~~-~~v~Vn~~-G~~~~r~~~l--~ 241 (302)
T smart00036 168 ICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPI-SVVQVPRDEFLLC-YDE-FGVFVNLY-GKRRSRNPIL--H 241 (302)
T ss_pred EEEEEcCCCCeEEEEeecccccccccccccccccccCce-EEEEECCCeEEEE-ECc-EEEEEeCC-CCccccceEE--E
Confidence 88887753455555543 111000 0000001111344 3333445545543 333 34444533 3 22211111 1
Q ss_pred CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc
Q psy6127 439 NNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD 479 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~ 479 (515)
....+.++++. ..+|+.-+ +..|.|+++.+++.++++.
T Consensus 242 w~~~p~~~~~~--~pyll~~~-~~~ievr~l~~~~l~q~i~ 279 (302)
T smart00036 242 WEFMPESFAYH--SPYLLAFH-DNGIEIRSIKTGELLQELA 279 (302)
T ss_pred cCCcccEEEEE--CCEEEEEc-CCcEEEEECCCCceEEEEe
Confidence 22335677776 46776665 4459999999999988886
|
Unpublished observations. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.79 Score=44.90 Aligned_cols=143 Identities=15% Similarity=0.175 Sum_probs=87.0
Q ss_pred EEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEe
Q psy6127 354 AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~ 433 (515)
+-|+..++.++ +...|.+.-|-+....... .........++|.++.||+|.+.+|+--.+.+|.+++....+.....
T Consensus 28 vFfDDaNkqlf-avrSggatgvvvkgpndDV--piSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~ 104 (657)
T KOG2377|consen 28 VFFDDANKQLF-AVRSGGATGVVVKGPNDDV--PISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEY 104 (657)
T ss_pred eeeccCcceEE-EEecCCeeEEEEeCCCCCC--CceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHH
Confidence 34443333333 3344555566665543222 22222334558999999999999999999999999997443322221
Q ss_pred -eccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC-eEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 434 -SGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG-YKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 434 -~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
..+......|....|+.. .-+|..+..| +.+|.+..- ..++..+. |...|+-..|.++-+.+.-++
T Consensus 105 ~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks-~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 105 TQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKS-HNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred HHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhh-cccCccEEEEccccceEeeec
Confidence 122233344888899866 5566665555 677765443 33333444 788899999999877655444
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=94.48 E-value=1.1 Score=46.76 Aligned_cols=114 Identities=16% Similarity=0.171 Sum_probs=73.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec--CCCeeEEEE--CCCCCEEEEEECCCcEEEEEeec-----
Q psy6127 309 KVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL--SGNKPIAAY--DPEGLAFAIGVNSDSIKLYDVRS----- 379 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~--s~~~~~l~~g~~dg~i~i~d~~~----- 379 (515)
...-+.-+.-++.-+.-+....+.|||.+.+........ .+.+..+.| .|+++.+++.+..+.|.+|.-..
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~ 110 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN 110 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence 334444444445444444456799999999876555444 666877776 46888888888899999886421
Q ss_pred --CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 380 --YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 380 --~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
....+...+........+|....|.++|..++.+ ++.+.|+|-
T Consensus 111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred CCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 1123334444444455678899999999665543 346888874
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=94.43 E-value=6.9 Score=40.23 Aligned_cols=199 Identities=11% Similarity=-0.010 Sum_probs=93.0
Q ss_pred CCeEEEEEeeC------CCeEEEEECCCCeeeEEec-C-CC--CCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCC
Q psy6127 275 KTTAIHASTKV------DATLRYLSLHDNKYVRYFP-G-HV--RKVSSLNLSPVDDSFISGSYD-----KTVRVWDLRQP 339 (515)
Q Consensus 275 ~~~l~~~s~~~------d~~v~vwd~~~~~~~~~~~-~-h~--~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd~~~~ 339 (515)
++.+++..|.. +..+.+||+.+.+-...-. + .. .........-++...+.|+.+ ..+..||+.+.
T Consensus 175 ~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~ 254 (470)
T PLN02193 175 GNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTN 254 (470)
T ss_pred CCEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCC
Confidence 34555555421 1347788887765432110 0 01 111111122235566667654 35788898877
Q ss_pred CeEEEEec---CCC-eeEEEECCCCCEEEEEECCC-----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEE
Q psy6127 340 NNVGMIQL---SGN-KPIAAYDPEGLAFAIGVNSD-----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI 410 (515)
Q Consensus 340 ~~~~~~~~---~~~-~~~~~~s~~~~~l~~g~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l 410 (515)
+....-.. +.+ ....+..-++++++.|+.++ .+..||+.+.......................+ +++..
T Consensus 255 ~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~~--~gkiy 332 (470)
T PLN02193 255 EWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVV--QGKVW 332 (470)
T ss_pred EEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEEE--CCcEE
Confidence 65443222 111 11112223566677776543 456777765432111100000011111112222 56666
Q ss_pred EEEECC----CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC--------------CcEEEEECCCC
Q psy6127 411 LVSTNG----SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD--------------GQVHIWNAERG 472 (515)
Q Consensus 411 ~~~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d--------------g~I~iwd~~~~ 472 (515)
+.++.+ ..+.+||+.+.+....-.............+..-++++++.|+.+ +.+.+||+.+.
T Consensus 333 viGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~ 412 (470)
T PLN02193 333 VVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETL 412 (470)
T ss_pred EEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcC
Confidence 666644 468999998876543221100011111122223356777777743 24788999877
Q ss_pred eEE
Q psy6127 473 YKV 475 (515)
Q Consensus 473 ~~~ 475 (515)
+-.
T Consensus 413 ~W~ 415 (470)
T PLN02193 413 QWE 415 (470)
T ss_pred EEE
Confidence 554
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=94.19 E-value=5.9 Score=38.54 Aligned_cols=238 Identities=13% Similarity=0.138 Sum_probs=116.4
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee---eEEe----cCCCCCeEEEEEcCC---CCEEEEEeC-C-----
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY---VRYF----PGHVRKVSSLNLSPV---DDSFISGSY-D----- 328 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~---~~~~----~~h~~~v~~l~~~~~---~~~l~s~s~-d----- 328 (515)
..+.|+|.|++.. +++. ..|.|++++ ..+.. +... .........++++|+ +.+|+.... .
T Consensus 3 ~P~~~a~~pdG~l-~v~e--~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 3 NPRSMAFLPDGRL-LVAE--RSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp SEEEEEEETTSCE-EEEE--TTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred CceEEEEeCCCcE-EEEe--CCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 3578999999754 3333 699999999 44433 2222 234567899999995 334433332 1
Q ss_pred ---CcEEEEEcCCC--C-----eE-EEEec----CCCeeEEEECCCCCEEEEEECCCc-----------EEEEEeecCCC
Q psy6127 329 ---KTVRVWDLRQP--N-----NV-GMIQL----SGNKPIAAYDPEGLAFAIGVNSDS-----------IKLYDVRSYDK 382 (515)
Q Consensus 329 ---g~i~iwd~~~~--~-----~~-~~~~~----~~~~~~~~~s~~~~~l~~g~~dg~-----------i~i~d~~~~~~ 382 (515)
..|.-|....+ . .+ ..... .+....+.|.|+|.+.++.+..+. -+|+.+.....
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~ 158 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS 158 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCc
Confidence 23444544433 1 11 11122 234567999999977666543322 12333322111
Q ss_pred C----Cc-------eeeecCCCCCcCeEEEEEcCC-CCEEEEE-ECCCcEEEEECCCCce----------------e---
Q psy6127 383 G----PF-------ASFKCPGERGCEWTGLKFSPD-GKLILVS-TNGSIIRLFDAFNGNC----------------V--- 430 (515)
Q Consensus 383 ~----~~-------~~~~~~~~~~~~i~~l~~sp~-~~~l~~~-s~dg~i~iwd~~~~~~----------------~--- 430 (515)
. +. ..+. ..+.. ....++|+|. |.+.++= +.++.=.|--+..|.. .
T Consensus 159 ~p~dnP~~~~~~~~~~i~-A~GlR-N~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~ 236 (331)
T PF07995_consen 159 IPADNPFVGDDGADSEIY-AYGLR-NPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDA 236 (331)
T ss_dssp B-TTSTTTTSTTSTTTEE-EE--S-EEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTG
T ss_pred CCCCCccccCCCceEEEE-EeCCC-ccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccc
Confidence 0 00 0000 01122 2347999998 6544432 1222222222222210 0
Q ss_pred -------EEeeccccCCCCCEEEEEec-------CCCEEEEEeCCCcEEEEECCCCeEEE---EEcCCCCCCeEEEEECC
Q psy6127 431 -------QSLSGVLNNNASPLEATFTP-------DSQFVASGSTDGQVHIWNAERGYKVC---VLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 431 -------~~~~~~~~~~~~i~~~~~sp-------~g~~l~sgs~dg~I~iwd~~~~~~~~---~~~~~h~~~V~~l~~sp 493 (515)
..... ..+...+..+.|.+ .|.++++.-..+.|....++.+..+. .+.......+.++++.|
T Consensus 237 ~~~~~~~~P~~~-~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~p 315 (331)
T PF07995_consen 237 PSCPGFVPPVFA-YPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGP 315 (331)
T ss_dssp SS-TTS---SEE-ETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEET
T ss_pred cCCCCcCcccee-ecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcC
Confidence 00000 01112356666664 34466655556778888876553322 22232555899999999
Q ss_pred CCCEEEEeeCCEEEEc
Q psy6127 494 KYHMLASACSNMAFWI 509 (515)
Q Consensus 494 ~~~~las~~~dv~iW~ 509 (515)
||.+.++.+.+.+||.
T Consensus 316 DG~Lyv~~d~~G~iyR 331 (331)
T PF07995_consen 316 DGALYVSDDSDGKIYR 331 (331)
T ss_dssp TSEEEEEE-TTTTEEE
T ss_pred CCeEEEEECCCCeEeC
Confidence 9999999887777773
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.056 Score=56.78 Aligned_cols=182 Identities=13% Similarity=0.179 Sum_probs=94.5
Q ss_pred eccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC--CCeeeeE-----ecCCCCceeEEEEecCCC-eEEEEEeeCC
Q psy6127 216 VFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCE--QGTSKNT-----INSKKYGVDLIKFTHSKT-TAIHASTKVD 286 (515)
Q Consensus 216 ~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~--~~~~~~~-----~~~~~~~v~~~~~~~~~~-~l~~~s~~~d 286 (515)
.++|..+.|-.+.|.. +...++ -.-|...+|++. .|+.... .......+.-+.|.|--. ....+.+..+
T Consensus 127 l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~ 204 (1283)
T KOG1916|consen 127 LAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKG 204 (1283)
T ss_pred HHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCC
Confidence 3567778888888854 222222 223678899876 3443222 222334455566665211 1333444567
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
+++++.++++... ..+.+|...+..++|...|-..+.+ ++|||..++..
T Consensus 205 ~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~------------------------------lSpDGtv~a~a 253 (1283)
T KOG1916|consen 205 GEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLAS------------------------------LSPDGTVFAWA 253 (1283)
T ss_pred CceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhhee------------------------------eCCCCcEEEEe
Confidence 8888877665433 4456688888877765433211111 55666666666
Q ss_pred ECCCcEEEEEeecCCCCCceeeecCCCCC-cCeEEEEEcCC-------C--CEEEEEE-CCCcEEEEECCCCcee
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCPGERG-CEWTGLKFSPD-------G--KLILVST-NGSIIRLFDAFNGNCV 430 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~i~~l~~sp~-------~--~~l~~~s-~dg~i~iwd~~~~~~~ 430 (515)
+.||.++.|.+.-.......++.....|. .+-.|.-|+.+ + .++++++ .+..+++|.....+|+
T Consensus 254 ~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 254 ISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred ecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 66666666655433322222333222332 11111112211 1 1233433 4567899998877776
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.37 Score=47.04 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=99.2
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE-EE-ec-CCC----ee-EEEECCCCCEEEEEECCCc
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG-MI-QL-SGN----KP-IAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~-~~-~~~----~~-~~~~s~~~~~l~~g~~dg~ 371 (515)
+..+......|..+-..|||+.++.-+. .++.++++.+..... .+ .. ++. +. .+..-..|.-+.+++.||.
T Consensus 213 i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~ 291 (733)
T COG4590 213 IRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGL 291 (733)
T ss_pred hhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCc
Confidence 3445555677888999999998776655 678888887643221 11 11 110 11 1122234566788888888
Q ss_pred EEEE-EeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 372 IKLY-DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 372 i~i~-d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
|.-| |++..........+...-...++.-+.-..+.+-+++-+..|++.++.....+.+-.-... ..+.-+++||
T Consensus 292 vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~----~~~~~~~~Sp 367 (733)
T COG4590 292 VSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAY----QAPQLVAMSP 367 (733)
T ss_pred eeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhh----cCcceeeeCc
Confidence 8665 6666544333333332222233333322223455667777888887764443333221111 1256789999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEE
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVC 476 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~ 476 (515)
.+.++++- +.|.++++.+++..+..
T Consensus 368 ~~~~Ll~e-~~gki~~~~l~Nr~Pei 392 (733)
T COG4590 368 NQAYLLSE-DQGKIRLAQLENRNPEI 392 (733)
T ss_pred ccchheee-cCCceEEEEecCCCCCc
Confidence 99999865 46789999888765433
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=94.03 E-value=4 Score=43.31 Aligned_cols=113 Identities=8% Similarity=0.101 Sum_probs=75.2
Q ss_pred eEEEEEcC--CCCEEEEEeCCCcEEEEEcCC-------C-------------CeEEEEecCCCeeEEEEC--CCCCEEEE
Q psy6127 310 VSSLNLSP--VDDSFISGSYDKTVRVWDLRQ-------P-------------NNVGMIQLSGNKPIAAYD--PEGLAFAI 365 (515)
Q Consensus 310 v~~l~~~~--~~~~l~s~s~dg~i~iwd~~~-------~-------------~~~~~~~~~~~~~~~~~s--~~~~~l~~ 365 (515)
|+.|.... +...|+.+..||.|.+|.+++ . ++...+..+...+.++++ ...+++|+
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence 44444332 345788999999999996621 0 122334555668889998 88899999
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC---C---EEEEEECCCcEEEEEC
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG---K---LILVSTNGSIIRLFDA 424 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~---~---~l~~~s~dg~i~iwd~ 424 (515)
++....|.||-............ ...+...|.+|+|-++. . ++++++-.|.+.+|++
T Consensus 183 SsNs~~VTVFaf~l~~~r~~~~~--s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 183 SSNSQEVTVFAFALVDERFYHVP--SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ecCCceEEEEEEecccccccccc--ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 99999999987765321111111 12345567789997743 2 7778888999998887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=93.90 E-value=6.1 Score=38.37 Aligned_cols=162 Identities=19% Similarity=0.275 Sum_probs=91.4
Q ss_pred CeeEEEECCCCCEEEEEECCCc------EEEEEeecCCC--CCce---eeecCCCCC-------cCeEEEEEcCCCCEEE
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDS------IKLYDVRSYDK--GPFA---SFKCPGERG-------CEWTGLKFSPDGKLIL 411 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~------i~i~d~~~~~~--~~~~---~~~~~~~~~-------~~i~~l~~sp~~~~l~ 411 (515)
....+.+.+++..+++.+.+|. +..+++..... .... ......... ...-++++.++|.+++
T Consensus 21 GlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~i 100 (326)
T PF13449_consen 21 GLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFWI 100 (326)
T ss_pred cEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEEE
Confidence 3667888876666777777777 55555554111 0000 011111111 1334788877887777
Q ss_pred EEECC------CcEEEEECCCCceeEEeecc------------ccCCCCCEEEEEecCCCEEEEEeC-----CC--c---
Q psy6127 412 VSTNG------SIIRLFDAFNGNCVQSLSGV------------LNNNASPLEATFTPDSQFVASGST-----DG--Q--- 463 (515)
Q Consensus 412 ~~s~d------g~i~iwd~~~~~~~~~~~~~------------~~~~~~i~~~~~sp~g~~l~sgs~-----dg--~--- 463 (515)
+.-.+ ..|+.++.. |+....+... ...+...-.++++|+|+.|+++.+ |+ .
T Consensus 101 s~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~ 179 (326)
T PF13449_consen 101 SSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPD 179 (326)
T ss_pred EeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccccc
Confidence 66566 678888865 6665544211 123445789999999996666542 22 1
Q ss_pred ----EEE--EECCC-CeEE----EEEcC----CCCCCeEEEEECCCCCEEEEe-------eCCEEEEcCCC
Q psy6127 464 ----VHI--WNAER-GYKV----CVLDG----DHPSAVQSLQFNPKYHMLASA-------CSNMAFWIPTL 512 (515)
Q Consensus 464 ----I~i--wd~~~-~~~~----~~~~~----~h~~~V~~l~~sp~~~~las~-------~~dv~iW~~~~ 512 (515)
+++ ||..+ ++.. ..+.. .....|..+.+.+++++++-- +...+|+.++.
T Consensus 180 ~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l 250 (326)
T PF13449_consen 180 NGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDL 250 (326)
T ss_pred cCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEc
Confidence 455 45444 3222 22221 034678999999999877742 12366666554
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.80 E-value=1.9 Score=43.06 Aligned_cols=147 Identities=12% Similarity=0.137 Sum_probs=84.4
Q ss_pred CCCEE-EEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCC-------EEEEEECCCcEEEEEeecCCCCCceeee
Q psy6127 318 VDDSF-ISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGL-------AFAIGVNSDSIKLYDVRSYDKGPFASFK 389 (515)
Q Consensus 318 ~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~-------~l~~g~~dg~i~i~d~~~~~~~~~~~~~ 389 (515)
+..+| ..|+....+.-.|++.|+.+.....+..+ .+.+.|..+ .-++|-.+..|.-.|.+...........
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~es 556 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVES 556 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeee
Confidence 34443 34555667778899999999988887766 788887532 1233444555555565543211110000
Q ss_pred cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 390 CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 390 ~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
..........+..-. ...|+++++..|.|++||--.-+.-..+++. ...|..+..+.+|+++++.+. ..+.+-|+
T Consensus 557 KdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKtalP~l---G~aIk~idvta~Gk~ilaTCk-~yllL~d~ 631 (776)
T COG5167 557 KDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTALPGL---GDAIKHIDVTANGKHILATCK-NYLLLTDV 631 (776)
T ss_pred hhccccccccccccc-cCceEEEecCCCceeeehhhcchhhhcCccc---ccceeeeEeecCCcEEEEeec-ceEEEEec
Confidence 011111122222222 3459999999999999995332222233332 334888999999998876653 45666665
Q ss_pred C
Q psy6127 470 E 470 (515)
Q Consensus 470 ~ 470 (515)
+
T Consensus 632 ~ 632 (776)
T COG5167 632 P 632 (776)
T ss_pred c
Confidence 3
|
|
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=93.59 E-value=3.8 Score=43.21 Aligned_cols=103 Identities=11% Similarity=0.195 Sum_probs=56.9
Q ss_pred EEEEEcCCCCEEEEEECCC-----cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy6127 399 TGLKFSPDGKLILVSTNGS-----IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 399 ~~l~~sp~~~~l~~~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
..++|-|+|..+++-..|| .|.++.. +|-.--.+....+........+|+-....++.+ ..+.+.+|-..+-.
T Consensus 250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfEr-NGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyh 327 (1243)
T COG5290 250 HQLSWKPQGSKYATIGTDGCSTSESVIFFER-NGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYH 327 (1243)
T ss_pred hccccccCCceeeeeccCCCCCcceEEEEcc-CCcccCCccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccceE
Confidence 3589999999999877554 3555542 222111111111122235566777665555544 56779999876654
Q ss_pred EEEEEcCCCCCCeEEEEECCC--CCEEEEeeCC
Q psy6127 474 KVCVLDGDHPSAVQSLQFNPK--YHMLASACSN 504 (515)
Q Consensus 474 ~~~~~~~~h~~~V~~l~~sp~--~~~las~~~d 504 (515)
.-..... .-..+.-+.|+|. ..++.++++-
T Consensus 328 WYLK~e~-~ip~~s~vkwhpe~~nTl~f~d~~~ 359 (1243)
T COG5290 328 WYLKVER-QIPGISYVKWHPEEKNTLLFRDGER 359 (1243)
T ss_pred EEEEEee-cCCCcceeeeccccCcEEEEecCCe
Confidence 3333322 3345677889993 3344444443
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=93.58 E-value=6.7 Score=38.09 Aligned_cols=150 Identities=18% Similarity=0.275 Sum_probs=84.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCc------EEEEEcCC--C--CeEE---E--Ee-cCC--------CeeEEEECCCCCE
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKT------VRVWDLRQ--P--NNVG---M--IQ-LSG--------NKPIAAYDPEGLA 362 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~------i~iwd~~~--~--~~~~---~--~~-~~~--------~~~~~~~s~~~~~ 362 (515)
-+.++.+.+.|++..+++.+.+|. +..+++.. + ..+. . +. ..+ ....+++.++|.+
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 356788888876667777777777 55555543 1 1111 1 11 111 2346778778877
Q ss_pred EEEEECC------CcEEEEEeecCCCCCceeee----------cCCCCCcCeEEEEEcCCCCEEEEEECC-----C--c-
Q psy6127 363 FAIGVNS------DSIKLYDVRSYDKGPFASFK----------CPGERGCEWTGLKFSPDGKLILVSTNG-----S--I- 418 (515)
Q Consensus 363 l~~g~~d------g~i~i~d~~~~~~~~~~~~~----------~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g--~- 418 (515)
+++.-.+ ..|..++.. +.......+. .....+..+.+++++|+|+.|+++.+. + .
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~ 177 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRAN 177 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccc
Confidence 7776555 667777755 2211100000 112345678899999999977765432 2 1
Q ss_pred ------EEE--EECCC-CceeEEeecccc------CCCCCEEEEEecCCCEEEE
Q psy6127 419 ------IRL--FDAFN-GNCVQSLSGVLN------NNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 419 ------i~i--wd~~~-~~~~~~~~~~~~------~~~~i~~~~~sp~g~~l~s 457 (515)
+++ ||..+ ++....+.-... ....+..+.+-+++++|+.
T Consensus 178 ~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 178 PDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred cccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 444 45444 333333322222 3445889999999997764
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.55 E-value=7.8 Score=37.75 Aligned_cols=272 Identities=11% Similarity=0.102 Sum_probs=131.0
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eeeeEec----CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG-TSKNTIN----SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~-~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
...+.++.|..+.+-+|+|. +|. ||...++ +.-.... .....+.++.|.++ . .++++ ..+.|..- -+
T Consensus 45 ~~~l~~v~F~d~~~g~avG~-~G~--il~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~-~~~~G--~~g~i~~S-~D 116 (334)
T PRK13684 45 EANLLDIAFTDPNHGWLVGS-NRT--LLETNDGGETWEERSLDLPEENFRLISISFKGD-E-GWIVG--QPSLLLHT-TD 116 (334)
T ss_pred CCceEEEEEeCCCcEEEEEC-CCE--EEEEcCCCCCceECccCCcccccceeeeEEcCC-c-EEEeC--CCceEEEE-CC
Confidence 56889999986666666664 454 3433332 2111111 12234667777643 2 22222 34443321 12
Q ss_pred CCeeeEEec---CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCCEEEEEECCC
Q psy6127 296 DNKYVRYFP---GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 296 ~~~~~~~~~---~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg 370 (515)
.|+.-.... ...+....+.....+..++ ++..|.|.. ..+.|+.-..+ .....+..+.+.|++.+++++ ..|
T Consensus 117 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~-~g~~G~i~~-S~DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g-~~G 193 (334)
T PRK13684 117 GGKNWTRIPLSEKLPGSPYLITALGPGTAEM-ATNVGAIYR-TTDGGKNWEALVEDAAGVVRNLRRSPDGKYVAVS-SRG 193 (334)
T ss_pred CCCCCeEccCCcCCCCCceEEEEECCCccee-eeccceEEE-ECCCCCCceeCcCCCcceEEEEEECCCCeEEEEe-CCc
Confidence 222211111 0111112222222222333 344444322 22233333322 223446778889988777665 445
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc-ccCCCCCEEEEEe
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV-LNNNASPLEATFT 449 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~s 449 (515)
.+..- .+.+. ...... .......++++.+.|+++.++++ ..|.+++=....|..-...... ......+..+.+.
T Consensus 194 ~i~~s-~~~gg-~tW~~~--~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~ 268 (334)
T PRK13684 194 NFYST-WEPGQ-TAWTPH--QRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYR 268 (334)
T ss_pred eEEEE-cCCCC-CeEEEe--eCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEc
Confidence 44321 11111 111111 22345578899999999877665 4566543234444432222211 1112236788999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcC--CCCCCeEEEEECCCCCEEEEee-CCEEEEcC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDG--DHPSAVQSLQFNPKYHMLASAC-SNMAFWIP 510 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~sp~~~~las~~-~dv~iW~~ 510 (515)
|++..+++| .+|.+. ...+.|+.-...+. .-....+.+.|..+++.+++|. +.+--|+-
T Consensus 269 ~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~il~~~~ 330 (334)
T PRK13684 269 TPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQRGVLLRYVG 330 (334)
T ss_pred CCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEECCCceEEEecC
Confidence 988766654 577554 44455544333321 1234688888888888887776 44555543
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=93.55 E-value=6.6 Score=36.89 Aligned_cols=225 Identities=14% Similarity=0.136 Sum_probs=124.1
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECC------CC-eeeEEecC-----CCCCeEEEEEcCCCC------------
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLH------DN-KYVRYFPG-----HVRKVSSLNLSPVDD------------ 320 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~------~~-~~~~~~~~-----h~~~v~~l~~~~~~~------------ 320 (515)
.-+.++++|.+..-+.. ...+...+||.. .. ..+.++.. .....+.+.|+....
T Consensus 24 N~WGia~~p~~~~WVad--ngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVAN--TGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred ccceeEecCCCCEEEec--CCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 45788999987544433 357888999986 12 22333331 234567777764322
Q ss_pred EEEEEeCCCcEEEEEcCCCCe-----EEEEecC--CCe-eEEEECC--CCCEEEE-EECCCcEEEEEeecCCCCCceeee
Q psy6127 321 SFISGSYDKTVRVWDLRQPNN-----VGMIQLS--GNK-PIAAYDP--EGLAFAI-GVNSDSIKLYDVRSYDKGPFASFK 389 (515)
Q Consensus 321 ~l~s~s~dg~i~iwd~~~~~~-----~~~~~~~--~~~-~~~~~s~--~~~~l~~-g~~dg~i~i~d~~~~~~~~~~~~~ 389 (515)
.++.+++||+|.-|...-... ...+... ..+ .-+++.. .+.+|.. -...++|.+||-.-........+.
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~ 181 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI 181 (336)
T ss_pred eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence 367788999999998543322 1222211 222 2344443 3445444 456889999986543211000000
Q ss_pred cC--CCCCcC--eEE---------EEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec------
Q psy6127 390 CP--GERGCE--WTG---------LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP------ 450 (515)
Q Consensus 390 ~~--~~~~~~--i~~---------l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp------ 450 (515)
-+ ...-.+ |.. ..-.++...=+.+..-|.|-+||. .|+.++.+... ..-...+.++..|
T Consensus 182 DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~-g~LNaPWG~a~APa~FG~~ 259 (336)
T TIGR03118 182 DPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASS-GRLNAPWGLAIAPESFGSL 259 (336)
T ss_pred CCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccC-CcccCCceeeeChhhhCCC
Confidence 00 000001 101 011111111222333468999995 67777777532 2333367787766
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCC-----CCeEEEEECC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHP-----SAVQSLQFNP 493 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~-----~~V~~l~~sp 493 (515)
.|.+|+---.||+|..+|..+|+.+..+..... ...+.++|..
T Consensus 260 sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 260 SGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 356666656799999999999998888876322 3467888866
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=93.38 E-value=9.3 Score=38.10 Aligned_cols=142 Identities=11% Similarity=0.120 Sum_probs=79.9
Q ss_pred EEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE-
Q psy6127 353 IAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ- 431 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~- 431 (515)
.+..++++.+++++.....++-||-... ..... .......++++.+.+++..++++ .+|.+ ++....++.-.
T Consensus 243 ~v~~~~dG~~~~vg~~G~~~~s~d~G~~---~W~~~--~~~~~~~l~~v~~~~dg~l~l~g-~~G~l-~~S~d~G~~~~~ 315 (398)
T PLN00033 243 TVNRSPDGDYVAVSSRGNFYLTWEPGQP---YWQPH--NRASARRIQNMGWRADGGLWLLT-RGGGL-YVSKGTGLTEED 315 (398)
T ss_pred eEEEcCCCCEEEEECCccEEEecCCCCc---ceEEe--cCCCccceeeeeEcCCCCEEEEe-CCceE-EEecCCCCcccc
Confidence 3456778777777654433333432210 00111 22334567899999999877665 55554 33444443211
Q ss_pred -Eeecc--ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc--CCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 432 -SLSGV--LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD--GDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 432 -~~~~~--~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~--~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
.+... ......+..+.|.+++..+++| .+|.+.... +.|+.-...+ ..-....+.+.|.++++..++|..
T Consensus 316 ~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~ 390 (398)
T PLN00033 316 FDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGND 390 (398)
T ss_pred cceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEeCC
Confidence 12211 1122347889999888776655 677666553 4454433332 123567889999998888887754
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=93.37 E-value=8.6 Score=37.65 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=27.8
Q ss_pred CCCEEEEEeCC-----------CcEEEEEcCCCCeEEEE-ecCCCee-EEEE-CCCCCEEEEEECC
Q psy6127 318 VDDSFISGSYD-----------KTVRVWDLRQPNNVGMI-QLSGNKP-IAAY-DPEGLAFAIGVNS 369 (515)
Q Consensus 318 ~~~~l~s~s~d-----------g~i~iwd~~~~~~~~~~-~~~~~~~-~~~~-s~~~~~l~~g~~d 369 (515)
+++..+.|+.+ ..+..||..+.+....- ....... ..+. .-+++..+.|+.+
T Consensus 63 ~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 63 DGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN 128 (346)
T ss_pred CCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence 46667777653 24677888776554432 1111111 1122 3477778887754
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=93.31 E-value=1.1 Score=44.47 Aligned_cols=92 Identities=12% Similarity=0.090 Sum_probs=63.1
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeE-EEEecCC----------------
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDL-IKFTHSK---------------- 275 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~-~~~~~~~---------------- 275 (515)
+...|......+.+++.+|++++.|+...=|.|.++|+.++..++.+++..+.-.. +.....+
T Consensus 299 ~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~ 378 (415)
T PF14655_consen 299 MRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRF 378 (415)
T ss_pred eEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcc
Confidence 34456677788999999999998888766699999999999888888776543211 1111111
Q ss_pred CeEEEEEeeCCCeEEEEECCCCeeeEEec
Q psy6127 276 TTAIHASTKVDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~~~~~~~~ 304 (515)
..+++.-.-.-|.|.||.+++|..+..+.
T Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 379 ALFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred eEEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 12222233478999999999888776654
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.20 E-value=8.9 Score=37.37 Aligned_cols=155 Identities=11% Similarity=0.122 Sum_probs=84.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEE-EEcCCCCeEEEE--ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKTVRV-WDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG 383 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~i~i-wd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~ 383 (515)
...+.++.+.|++.+++++ ..|.+.. +| ..++.-... .....+..+.+.++++.++++ ..|.+.+=....+.
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~-- 246 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLE-- 246 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCC--
Confidence 4578899999987666554 4465433 22 222322222 223457788999999887776 45665432222221
Q ss_pred CceeeecC-CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 384 PFASFKCP-GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 384 ~~~~~~~~-~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
.......+ ......+..+.+.|++..+++ +.+|.+. .....|+.-...............+.|..+++.+++ +..|
T Consensus 247 sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~-G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~G 323 (334)
T PRK13684 247 SWSKPIIPEITNGYGYLDLAYRTPGEIWAG-GGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVL-GQRG 323 (334)
T ss_pred ccccccCCccccccceeeEEEcCCCCEEEE-cCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEE-CCCc
Confidence 11111111 112235678999998776554 4566554 344455443333221122234677888877766664 4678
Q ss_pred cEEEEEC
Q psy6127 463 QVHIWNA 469 (515)
Q Consensus 463 ~I~iwd~ 469 (515)
.|--|+-
T Consensus 324 ~il~~~~ 330 (334)
T PRK13684 324 VLLRYVG 330 (334)
T ss_pred eEEEecC
Confidence 7776653
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.89 Score=41.21 Aligned_cols=68 Identities=12% Similarity=0.262 Sum_probs=51.5
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEE-------cC------CCCCCeEEEEECCCCCEEEEee-CCEEEEcCC
Q psy6127 446 ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVL-------DG------DHPSAVQSLQFNPKYHMLASAC-SNMAFWIPT 511 (515)
Q Consensus 446 ~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~-------~~------~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~ 511 (515)
+.+..++++|++-+.+|.+++||+.+++.+..- .. .....|..+..+.+|.-+++-+ ++...|+.+
T Consensus 16 ~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~ 95 (219)
T PF07569_consen 16 SFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPD 95 (219)
T ss_pred EEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccc
Confidence 335567899999999999999999998765433 10 1456789999999998777765 668888876
Q ss_pred CC
Q psy6127 512 LS 513 (515)
Q Consensus 512 ~~ 513 (515)
..
T Consensus 96 L~ 97 (219)
T PF07569_consen 96 LG 97 (219)
T ss_pred cc
Confidence 53
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=92.86 E-value=10 Score=37.09 Aligned_cols=156 Identities=13% Similarity=0.057 Sum_probs=72.9
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCCeEEEEec-----CCC-eeEEEECCCCCEEEEEECC-----------CcEEEE
Q psy6127 318 VDDSFISGSYD-----KTVRVWDLRQPNNVGMIQL-----SGN-KPIAAYDPEGLAFAIGVNS-----------DSIKLY 375 (515)
Q Consensus 318 ~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~-----~~~-~~~~~~s~~~~~l~~g~~d-----------g~i~i~ 375 (515)
+++.++.|+.+ ..+.+||..+.+....-.. ..+ ....+...+++.++.|+.+ ..+.+|
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~y 164 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY 164 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEE
Confidence 35666677653 3577889887655432211 111 1112223356667777643 246778
Q ss_pred EeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-------------CCcEEEEECCCCceeEEeeccccCCCC
Q psy6127 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-------------GSIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
|..+.......................+ +++..+.++. ...+.+||..+.+-...-.........
T Consensus 165 d~~~~~W~~l~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r 242 (341)
T PLN02153 165 NIADGKWVQLPDPGENFEKRGGAGFAVV--QGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSAR 242 (341)
T ss_pred ECCCCeEeeCCCCCCCCCCCCcceEEEE--CCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCc
Confidence 8776443211111000011111112222 5555555442 145888998876544321110001000
Q ss_pred CEEEEEecCCCEEEEEeCC--------------CcEEEEECCCCeEE
Q psy6127 443 PLEATFTPDSQFVASGSTD--------------GQVHIWNAERGYKV 475 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~d--------------g~I~iwd~~~~~~~ 475 (515)
....+...++++++.|+.. +.+..+|..+.+-.
T Consensus 243 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~ 289 (341)
T PLN02153 243 SVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWE 289 (341)
T ss_pred ceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEEE
Confidence 1112223356777777741 25788888766543
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=92.64 E-value=5.3 Score=42.43 Aligned_cols=110 Identities=15% Similarity=0.160 Sum_probs=68.0
Q ss_pred CCCEEEEEECCCcEEEEEeec-------C----CC----CCceeeecCCCCCcCeEEEEEc--CCCCEEEEEECCCcEEE
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRS-------Y----DK----GPFASFKCPGERGCEWTGLKFS--PDGKLILVSTNGSIIRL 421 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~-------~----~~----~~~~~~~~~~~~~~~i~~l~~s--p~~~~l~~~s~dg~i~i 421 (515)
+...|+++..||.|.+|.++. . +. ....+.. .........+++++ ...++||+++....|.|
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f-~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTV 191 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFF-HLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTV 191 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCe-EeecCCceeEEEEEecCcceEEEEecCCceEEE
Confidence 445788899999999997632 0 00 0000111 11223356689998 78889999998888888
Q ss_pred EECCCCceeEEeeccccCCCCCEEEEEecCC---C---EEEEEeCCCcEEEEEC
Q psy6127 422 FDAFNGNCVQSLSGVLNNNASPLEATFTPDS---Q---FVASGSTDGQVHIWNA 469 (515)
Q Consensus 422 wd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g---~---~l~sgs~dg~I~iwd~ 469 (515)
|-...............+...|.+++|-++. . +|++++-.|.+.+|++
T Consensus 192 Faf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 192 FAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 7654421111110011123348899998753 2 7888899999999887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=92.58 E-value=10 Score=41.44 Aligned_cols=176 Identities=16% Similarity=0.184 Sum_probs=100.3
Q ss_pred EEEEEcCCCCeEEEEecCCC-----eeEEEECCCCC--EEEEEE-----------CCCcEEEEEeecCCCCCceeeecCC
Q psy6127 331 VRVWDLRQPNNVGMIQLSGN-----KPIAAYDPEGL--AFAIGV-----------NSDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 331 i~iwd~~~~~~~~~~~~~~~-----~~~~~~s~~~~--~l~~g~-----------~dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
|++.|..+++.+..+.+... +....|+.... ++++|. .+|.++.|++-..... ..+-...
T Consensus 855 I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~--lellh~T 932 (1205)
T KOG1898|consen 855 IRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDK--LELLHKT 932 (1205)
T ss_pred EEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCce--eeeeecc
Confidence 77778777777666644432 34455554333 333333 2455777776654321 1121112
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEE--EECC
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHI--WNAE 470 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~i--wd~~ 470 (515)
.-.++ -.+..|...++++| ....+++||+...+.++...... -...|..+.+. +..+++|...-.|.+ |+..
T Consensus 933 ~~~~~--v~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~-~p~~Is~iqt~--~~RI~VgD~qeSV~~~~y~~~ 1006 (1205)
T KOG1898|consen 933 EIPGP--VGAICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKF-IPNRISSIQTY--GARIVVGDIQESVHFVRYRRE 1006 (1205)
T ss_pred CCCcc--ceEEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhcc-CceEEEEEeec--ceEEEEeeccceEEEEEEecC
Confidence 22333 35666766666655 45689999998877665544322 12225556554 667888875554544 6655
Q ss_pred CCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcCCCCCC
Q psy6127 471 RGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLSAD 515 (515)
Q Consensus 471 ~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~~~~~d 515 (515)
..+.+......-...|+++.+-. ...+|.++.-+.+|-+..++|
T Consensus 1007 ~n~l~~fadD~~pR~Vt~~~~lD-~~tvagaDrfGNi~~vR~P~d 1050 (1205)
T KOG1898|consen 1007 DNQLIVFADDPVPRHVTALELLD-YDTVAGADRFGNIAVVRIPPD 1050 (1205)
T ss_pred CCeEEEEeCCCccceeeEEEEec-CCceeeccccCcEEEEECCCc
Confidence 55555544433445677666554 455777887788887766654
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.69 Score=29.31 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=26.1
Q ss_pred CcEEEEEEcCCC---CEEEEEeCCCeEEEEECCC
Q psy6127 222 DKINSLDYSSDG---SLLISCSDDDQIIIYDCEQ 252 (515)
Q Consensus 222 ~~I~~l~~spd~---~~lasgs~dg~i~iwd~~~ 252 (515)
+.|.+++|||+. .+|+.+-.-|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999844 5888888889999999985
|
It contains a characteristic DLL sequence motif. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=92.32 E-value=13 Score=37.16 Aligned_cols=144 Identities=13% Similarity=0.083 Sum_probs=86.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeee--eE-e-cCCCCceeEEEEec-----CCCeEEEEEeeCCCeEEEEECCC--Ce--
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSK--NT-I-NSKKYGVDLIKFTH-----SKTTAIHASTKVDATLRYLSLHD--NK-- 298 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~--~~-~-~~~~~~v~~~~~~~-----~~~~l~~~s~~~d~~v~vwd~~~--~~-- 298 (515)
+...+++||..|.++||+...+... .. + ..-..+|..+..-+ ....+++. .-..+.+|.+.. |.
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVL---hP~kl~vY~v~~~~g~~~ 112 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVL---HPRKLSVYSVSLVDGTVE 112 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEe---cCCEEEEEEEEecCCCcc
Confidence 3468999999999999998643311 11 1 11235676666543 22334443 367777877621 11
Q ss_pred -----eeEEecCCC--CCeEEEEEcC----C-CCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 299 -----YVRYFPGHV--RKVSSLNLSP----V-DDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 299 -----~~~~~~~h~--~~v~~l~~~~----~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
.+.....|. .....++.-| . ..++..=+.||.+.+++-+.-.....+...--...+++.+.-+.|+++
T Consensus 113 ~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~ 192 (418)
T PF14727_consen 113 HGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTA 192 (418)
T ss_pred cCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEe
Confidence 112222232 2223333322 2 246778899999999997665444444332224458888999999999
Q ss_pred ECCCcEEEEEee
Q psy6127 367 VNSDSIKLYDVR 378 (515)
Q Consensus 367 ~~dg~i~i~d~~ 378 (515)
+.+..+..|...
T Consensus 193 sss~~l~~Yky~ 204 (418)
T PF14727_consen 193 SSSWTLECYKYQ 204 (418)
T ss_pred cCceeEEEecHH
Confidence 999899988764
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=92.25 E-value=3.7 Score=37.70 Aligned_cols=145 Identities=16% Similarity=0.220 Sum_probs=81.9
Q ss_pred EEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-C--CcEEEEEcCC----CCeEE---EEecCCCeeEEEECC
Q psy6127 289 LRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-D--KTVRVWDLRQ----PNNVG---MIQLSGNKPIAAYDP 358 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-d--g~i~iwd~~~----~~~~~---~~~~~~~~~~~~~s~ 358 (515)
-.+||+.+++....-........+-.+.+||+.+.+|+. | ..+++++... ..... .+....--.....-|
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 357898887654332233334445568899999999875 2 3578887654 11111 112222234566678
Q ss_pred CCCEEEEEECCC-cEEEEEeecCCCCCceeeecC-----CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE
Q psy6127 359 EGLAFAIGVNSD-SIKLYDVRSYDKGPFASFKCP-----GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 359 ~~~~l~~g~~dg-~i~i~d~~~~~~~~~~~~~~~-----~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
||+.++.|+... +..+|.-+....... ..... ......---+...|+|+.++.+..+ -.+||..+.+.++.
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~-~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v~~~ 204 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPV-TLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTVVRT 204 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCce-eeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeEEee
Confidence 999999988764 334444322111111 11110 0111122257778999999888765 45778888877666
Q ss_pred eecc
Q psy6127 433 LSGV 436 (515)
Q Consensus 433 ~~~~ 436 (515)
+...
T Consensus 205 lP~l 208 (243)
T PF07250_consen 205 LPDL 208 (243)
T ss_pred CCCC
Confidence 6543
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A | Back alignment and domain information |
|---|
Probab=92.17 E-value=16 Score=37.87 Aligned_cols=255 Identities=11% Similarity=0.111 Sum_probs=125.6
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCee--eeEecCC-CCceeEEEEecCC-CeEEEEEeeCCCeEEEEECCCCeeeEEecC
Q psy6127 230 SSDGSLLISCSDDDQIIIYDCEQGTS--KNTINSK-KYGVDLIKFTHSK-TTAIHASTKVDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 230 spd~~~lasgs~dg~i~iwd~~~~~~--~~~~~~~-~~~v~~~~~~~~~-~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~ 305 (515)
..++..++.+..+|.+....+..... ....-+. .....++.+..++ ..+++++...|+.+..|....-+.+..+.
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~- 297 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLP- 297 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE--
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEecc-
Confidence 45677888999999999887765331 1111122 4456677777665 46666665567777777765556666665
Q ss_pred CCCCeEEEEEcCC----CC------EEEEEe---CCCcEEEEEcCCC---CeEEEEecCC--CeeEEEECC-CCCEEEEE
Q psy6127 306 HVRKVSSLNLSPV----DD------SFISGS---YDKTVRVWDLRQP---NNVGMIQLSG--NKPIAAYDP-EGLAFAIG 366 (515)
Q Consensus 306 h~~~v~~l~~~~~----~~------~l~s~s---~dg~i~iwd~~~~---~~~~~~~~~~--~~~~~~~s~-~~~~l~~g 366 (515)
.-++|.++++.+. .. .|++++ .+|.+++..-.-+ .........+ .+..+.... ++.+++.+
T Consensus 298 N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~S 377 (504)
T PF10433_consen 298 NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVLS 377 (504)
T ss_dssp ---SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEEE
T ss_pred CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEEE
Confidence 4578999888532 11 555554 4678887742211 1222223333 122233222 24566666
Q ss_pred ECCCcEEEEEeec-CCCCCceeee--cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCC
Q psy6127 367 VNSDSIKLYDVRS-YDKGPFASFK--CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP 443 (515)
Q Consensus 367 ~~dg~i~i~d~~~-~~~~~~~~~~--~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 443 (515)
..+ .-+++.+.. .......... ........+.+-.+. +..++=.+. ..|++.+...++....+.... ...|
T Consensus 378 ~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~-~~i~l~~~~~~~~~~~w~~~~--~~~I 451 (504)
T PF10433_consen 378 FPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTP-KGIRLIDLEDGKLTQEWKPPA--GSII 451 (504)
T ss_dssp ESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEES-SEEEEEESSSTSEEEEEE-TT--S---
T ss_pred cCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEec-CeEEEEECCCCeEEEEEeCCC--CCeE
Confidence 544 455666641 1111110110 111111122222222 334443333 348888887777766654332 2225
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC----CCCCCeEEEEECC
Q psy6127 444 LEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG----DHPSAVQSLQFNP 493 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~h~~~V~~l~~sp 493 (515)
.+.+.. +.+++.+-.++.+..+.++.......... .....|.|+...|
T Consensus 452 ~~a~~~--~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 452 VAASIN--DPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp SEEEES--SSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEEEEC--CCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 555554 45677777788899999887766533321 1357788888776
|
... |
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=92.09 E-value=13 Score=36.70 Aligned_cols=199 Identities=11% Similarity=-0.023 Sum_probs=103.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCC--CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC-C
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKK--YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV-R 308 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~-~ 308 (515)
+++ +..+..||.+.-.|.++++.+....... ..+..-.+..+|+ +++. +.++.++.+|.++|+.+..+.... -
T Consensus 68 dg~-v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g--~~~g~~y~ld~~~G~~~W~~~~~~~~ 143 (370)
T COG1520 68 DGT-VYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVG--SWDGKLYALDASTGTLVWSRNVGGSP 143 (370)
T ss_pred CCe-EEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEe--cccceEEEEECCCCcEEEEEecCCCe
Confidence 554 4455778888888888887664333221 2233333333554 4444 368899999998999888776555 1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCC-eeEEEEC--CCCCEEEEEEC--CCcEEEEEeecCCCC
Q psy6127 309 KVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGN-KPIAAYD--PEGLAFAIGVN--SDSIKLYDVRSYDKG 383 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~s--~~~~~l~~g~~--dg~i~i~d~~~~~~~ 383 (515)
.+..-....++ .++.++.++.+.-.|..+++..-....... -....-+ .....+..+.. ++.+.-.|..++...
T Consensus 144 ~~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~ 222 (370)
T COG1520 144 YYASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLK 222 (370)
T ss_pred EEecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEe
Confidence 12222222223 344444778888889888888766544321 1111111 22333444444 455555565554321
Q ss_pred CceeeecCCCCCcC--eEEEEEcC--CCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 384 PFASFKCPGERGCE--WTGLKFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 384 ~~~~~~~~~~~~~~--i~~l~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
-............. ...+...+ .+.-+..++.++.+...|..+++.+-.+..
T Consensus 223 w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 223 WSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred eeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEec
Confidence 11111111111000 00000000 112235666777788889889988777664
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=92.07 E-value=11 Score=37.23 Aligned_cols=117 Identities=14% Similarity=0.225 Sum_probs=79.0
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee----eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK----NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
..++|.++.||+|.+.||.--.|++|.+++....+.. .+.+..+..|....|+.+ ..+++.+ +..+-+|-..
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~---~~G~e~y~v~ 140 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFIT---DQGIEFYQVL 140 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEe---cCCeEEEEEc
Confidence 4569999999999999999999999999998533322 223344556888889877 4455554 5556666554
Q ss_pred CC-eeeEEecCCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCC
Q psy6127 296 DN-KYVRYFPGHVRKVSSLNLSPVDDSFISGS--YDKTVRVWDLRQPN 340 (515)
Q Consensus 296 ~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~s--~dg~i~iwd~~~~~ 340 (515)
.. +.++..+.|...|.--.|.++.+.+.-++ ..+++.=+.++++.
T Consensus 141 pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~ 188 (657)
T KOG2377|consen 141 PEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGT 188 (657)
T ss_pred hhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeece
Confidence 32 34455567888899999999887433332 34444445555543
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=92.06 E-value=16 Score=37.54 Aligned_cols=195 Identities=8% Similarity=0.034 Sum_probs=90.6
Q ss_pred CCCEEEEEeCC-------CeEEEEECCCCeeeeEecCC-CC-c--eeEEEEecCCCeEEEEEeeC----CCeEEEEECCC
Q psy6127 232 DGSLLISCSDD-------DQIIIYDCEQGTSKNTINSK-KY-G--VDLIKFTHSKTTAIHASTKV----DATLRYLSLHD 296 (515)
Q Consensus 232 d~~~lasgs~d-------g~i~iwd~~~~~~~~~~~~~-~~-~--v~~~~~~~~~~~l~~~s~~~----d~~v~vwd~~~ 296 (515)
++.+++.|+.+ ..+..||+.+.+-.. +... .. . ....+....+..+++.+|.. -..+..+|+.+
T Consensus 175 ~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~-~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t 253 (470)
T PLN02193 175 GNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSI-SPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTT 253 (470)
T ss_pred CCEEEEECCcCCCCCCeeCcEEEEECCCCEEEe-CCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCC
Confidence 34556666643 247788887654332 1110 00 0 11111222244566555421 14688899887
Q ss_pred CeeeEEecC----CCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCCeEEEEecC----CCeeEEEECCCCCEE
Q psy6127 297 NKYVRYFPG----HVRKVSSLNLSPVDDSFISGSYDK-----TVRVWDLRQPNNVGMIQLS----GNKPIAAYDPEGLAF 363 (515)
Q Consensus 297 ~~~~~~~~~----h~~~v~~l~~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~----~~~~~~~~s~~~~~l 363 (515)
.+-...-.. ....-.++.. -+++..+.|+.++ .+..||+.+.+....-... ......+...+++.+
T Consensus 254 ~~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~~~gkiy 332 (470)
T PLN02193 254 NEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVW 332 (470)
T ss_pred CEEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEEECCcEE
Confidence 654332111 1111122222 2456666776543 4677888776543321100 000111112356777
Q ss_pred EEEECC----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC--------------CcEEEEECC
Q psy6127 364 AIGVNS----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG--------------SIIRLFDAF 425 (515)
Q Consensus 364 ~~g~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d--------------g~i~iwd~~ 425 (515)
+.++.+ ..+.+||+.+....................++.+ +++.++.|+.. ..+.+||+.
T Consensus 333 viGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~ 410 (470)
T PLN02193 333 VVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAV--GKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTE 410 (470)
T ss_pred EEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEE--CCEEEEECCccCCccccccCccceeccEEEEEcC
Confidence 777655 4588899877543211111000011111122222 55666677642 247888988
Q ss_pred CCcee
Q psy6127 426 NGNCV 430 (515)
Q Consensus 426 ~~~~~ 430 (515)
+.+..
T Consensus 411 t~~W~ 415 (470)
T PLN02193 411 TLQWE 415 (470)
T ss_pred cCEEE
Confidence 77653
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=91.93 E-value=13 Score=36.06 Aligned_cols=137 Identities=10% Similarity=0.118 Sum_probs=64.5
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCee---eeEecCCCCceeEEEEecCCCeEEEEEeeC----CCeEEEEECCCCee
Q psy6127 232 DGSLLISCSDD-----DQIIIYDCEQGTS---KNTINSKKYGVDLIKFTHSKTTAIHASTKV----DATLRYLSLHDNKY 299 (515)
Q Consensus 232 d~~~lasgs~d-----g~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~----d~~v~vwd~~~~~~ 299 (515)
++.+++.|+.+ ..+..+|+.+.+. ...+..-..+....+..--+..+++.+|.. ...+..||+.+.+-
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W 151 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLETQEW 151 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCCCCe
Confidence 45666777654 3566677765542 122211111111111111234555555421 34688889887653
Q ss_pred eEE--ecCCCCCeEEEEEcCCCCEEEEEeCCCc----EEEEEcCCCCeEEEEecC---CCe---eEE-EECCCCCEEEEE
Q psy6127 300 VRY--FPGHVRKVSSLNLSPVDDSFISGSYDKT----VRVWDLRQPNNVGMIQLS---GNK---PIA-AYDPEGLAFAIG 366 (515)
Q Consensus 300 ~~~--~~~h~~~v~~l~~~~~~~~l~s~s~dg~----i~iwd~~~~~~~~~~~~~---~~~---~~~-~~s~~~~~l~~g 366 (515)
... +... ......+...+++..+.|+.++. +..||.++.+....-... .+. ... ....+++.++.|
T Consensus 152 ~~~~~~p~~-~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~G 230 (323)
T TIGR03548 152 FELPDFPGE-PRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIKINESLLLCIG 230 (323)
T ss_pred eECCCCCCC-CCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEEECCCEEEEEC
Confidence 321 2211 12222223345677777776543 568888876654322111 111 111 222356777777
Q ss_pred ECC
Q psy6127 367 VNS 369 (515)
Q Consensus 367 ~~d 369 (515)
+.+
T Consensus 231 G~~ 233 (323)
T TIGR03548 231 GFN 233 (323)
T ss_pred CcC
Confidence 765
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=91.83 E-value=15 Score=36.57 Aligned_cols=38 Identities=8% Similarity=-0.090 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCeEEEEecCC-C--eeEEEECCCCCEEEEEEC
Q psy6127 330 TVRVWDLRQPNNVGMIQLSG-N--KPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~~~-~--~~~~~~s~~~~~l~~g~~ 368 (515)
.+.+||..+.+....-.... . ..++.. .++++.+.|+.
T Consensus 190 ~v~~YD~~t~~W~~~~~~p~~~~~~~a~v~-~~~~iYv~GG~ 230 (376)
T PRK14131 190 EVLSYDPSTNQWKNAGESPFLGTAGSAVVI-KGNKLWLINGE 230 (376)
T ss_pred eEEEEECCCCeeeECCcCCCCCCCcceEEE-ECCEEEEEeee
Confidence 47889988776554322221 1 112222 35666667663
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=91.75 E-value=13 Score=35.92 Aligned_cols=106 Identities=8% Similarity=0.076 Sum_probs=53.3
Q ss_pred CCeEEEEEeeCC----CeEEEEECCCCee---eEEecCCCCCe--EEEEEcCCCCEEEEEeC-----CCcEEEEEcCCCC
Q psy6127 275 KTTAIHASTKVD----ATLRYLSLHDNKY---VRYFPGHVRKV--SSLNLSPVDDSFISGSY-----DKTVRVWDLRQPN 340 (515)
Q Consensus 275 ~~~l~~~s~~~d----~~v~vwd~~~~~~---~~~~~~h~~~v--~~l~~~~~~~~l~s~s~-----dg~i~iwd~~~~~ 340 (515)
++.+++.+|..+ ..+..+|+.+.+. ...+..-..+. .+++.. +++..+.|+. ...+..||+.+.+
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-DGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-CCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 345555554221 3577777766553 12221111111 122222 4666666664 2458888988776
Q ss_pred eEEEEecC--CCeeEEEECCCCCEEEEEECCC----cEEEEEeecCC
Q psy6127 341 NVGMIQLS--GNKPIAAYDPEGLAFAIGVNSD----SIKLYDVRSYD 381 (515)
Q Consensus 341 ~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg----~i~i~d~~~~~ 381 (515)
....-... ......+...++++.+.|+.++ .+..||.++..
T Consensus 151 W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 151 WFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred eeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 54432222 1122233344677778877654 34678877654
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=91.59 E-value=15 Score=36.38 Aligned_cols=52 Identities=13% Similarity=0.101 Sum_probs=27.0
Q ss_pred CCCEEEEEeCC-----------CcEEEEEcCCCCeEEEEec-CCCee-EEEEC-CCCCEEEEEECC
Q psy6127 318 VDDSFISGSYD-----------KTVRVWDLRQPNNVGMIQL-SGNKP-IAAYD-PEGLAFAIGVNS 369 (515)
Q Consensus 318 ~~~~l~s~s~d-----------g~i~iwd~~~~~~~~~~~~-~~~~~-~~~~s-~~~~~l~~g~~d 369 (515)
++...+.|+.+ ..+..||..+.+....-.. ..... ..+.. .+++..+.|+.+
T Consensus 84 ~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 84 DGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred CCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 46666666653 2467788877654443211 11111 12222 467777777754
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=91.56 E-value=1.4 Score=39.94 Aligned_cols=67 Identities=13% Similarity=0.171 Sum_probs=48.0
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeeeeEe-------c-------CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-------N-------SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 229 ~spd~~~lasgs~dg~i~iwd~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
+..++++|++-..+|.+++||+.+++.+..- . .....|..+..+.+|.-++..+ +|..+.|+.
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls---ng~~y~y~~ 94 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS---NGDSYSYSP 94 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe---CCCEEEecc
Confidence 4457889999999999999999988764332 1 2446677778887777666654 677788876
Q ss_pred CCCe
Q psy6127 295 HDNK 298 (515)
Q Consensus 295 ~~~~ 298 (515)
+-+.
T Consensus 95 ~L~~ 98 (219)
T PF07569_consen 95 DLGC 98 (219)
T ss_pred ccce
Confidence 5443
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=91.41 E-value=6 Score=42.65 Aligned_cols=79 Identities=10% Similarity=0.203 Sum_probs=52.8
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC----------CCce---eEEeec-----cccCCCCCEEEEEecC---
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF----------NGNC---VQSLSG-----VLNNNASPLEATFTPD--- 451 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~----------~~~~---~~~~~~-----~~~~~~~i~~~~~sp~--- 451 (515)
...-.|..+.++|+|.+++..+..|. .|-.+. .|+. .+++.. ..+....|..+.|+|.
T Consensus 82 ~~~f~v~~i~~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~ 160 (717)
T PF10168_consen 82 PPLFEVHQISLNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSES 160 (717)
T ss_pred CCceeEEEEEECCCCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCC
Confidence 34457889999999999998887664 443332 1111 111110 1123345889999996
Q ss_pred CCEEEEEeCCCcEEEEECCCC
Q psy6127 452 SQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~ 472 (515)
+..|+.-..|+++|+||+...
T Consensus 161 ~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 161 DSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCeEEEEecCCEEEEEecCCC
Confidence 478999999999999999653
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=90.79 E-value=18 Score=35.62 Aligned_cols=199 Identities=17% Similarity=0.211 Sum_probs=113.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEE----ecCCCe--EEEEEeeCC--CeEEEEECC--CCeee
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKF----THSKTT--AIHASTKVD--ATLRYLSLH--DNKYV 300 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~----~~~~~~--l~~~s~~~d--~~v~vwd~~--~~~~~ 300 (515)
|...+++....++-+.+||++ |+.+..+.. +..+.+.. .-.++. +++++-..+ .+|++|.+. ++..
T Consensus 66 p~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L- 141 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLD-GKELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL- 141 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETT-S-EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE-
T ss_pred cccceEEEEeCCCCEEEEcCC-CcEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcc-
Confidence 455677777888889999997 777777753 23333322 123443 344442222 578998765 3433
Q ss_pred EEecC-------CCCCeEEEEEc--C-CCC-EEEEEeCCCcEEEEEcC---CC----CeEEEEecCCCeeEEEECCCCCE
Q psy6127 301 RYFPG-------HVRKVSSLNLS--P-VDD-SFISGSYDKTVRVWDLR---QP----NNVGMIQLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 301 ~~~~~-------h~~~v~~l~~~--~-~~~-~l~s~s~dg~i~iwd~~---~~----~~~~~~~~~~~~~~~~~s~~~~~ 362 (515)
..+.. ....+..+|+. | +|. +.+....+|.+.-|-+. .+ +.++.+.....+..+..+.....
T Consensus 142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~ 221 (381)
T PF02333_consen 142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGR 221 (381)
T ss_dssp EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTE
T ss_pred eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCC
Confidence 22221 12346777764 3 344 56667888988877664 33 35777888778999999999999
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEc--CCC-CEEEEEE-CCCcEEEEECCCC-ceeEEe
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFS--PDG-KLILVST-NGSIIRLFDAFNG-NCVQSL 433 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~s--p~~-~~l~~~s-~dg~i~iwd~~~~-~~~~~~ 433 (515)
|..+-++.-|.-|+.+.........+.. .......+..+++- +++ .||++++ .+++..+|+.... ..+..+
T Consensus 222 LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~~~~g~f 299 (381)
T PF02333_consen 222 LYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPNAYVGSF 299 (381)
T ss_dssp EEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT--EEEEE
T ss_pred EEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCCcccceE
Confidence 9999888877777766432222122211 12234567777774 344 3666666 5678999997643 333444
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12 | Back alignment and domain information |
|---|
Probab=90.78 E-value=15 Score=34.84 Aligned_cols=169 Identities=15% Similarity=0.140 Sum_probs=95.8
Q ss_pred eEEEEECCCCeeeeEecCC------CCceeEEEEecCCC----eEEEEEeeCCCeEEEEECCCCeeeEEecCCC------
Q psy6127 244 QIIIYDCEQGTSKNTINSK------KYGVDLIKFTHSKT----TAIHASTKVDATLRYLSLHDNKYVRYFPGHV------ 307 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~----~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~------ 307 (515)
.+.+||+.+++.++++.-+ ......+.+..... ..+..+-...+.+.|+|+.+++..+.+..+.
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~ 114 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA 114 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence 6888999999888776533 34567777776332 4555554556799999999988766554321
Q ss_pred -------------CCeEEEEEcC---CCCEEEEEeCCCcEEEEEcCC-----C---------CeEEEEec-CCCeeEEEE
Q psy6127 308 -------------RKVSSLNLSP---VDDSFISGSYDKTVRVWDLRQ-----P---------NNVGMIQL-SGNKPIAAY 356 (515)
Q Consensus 308 -------------~~v~~l~~~~---~~~~l~s~s~dg~i~iwd~~~-----~---------~~~~~~~~-~~~~~~~~~ 356 (515)
+.+..++.+| +++.|+-....+. ++|.+.+ . ..+..+.. ......+++
T Consensus 115 ~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~ 193 (287)
T PF03022_consen 115 GPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAI 193 (287)
T ss_dssp EEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEEE
T ss_pred cceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC-cEEEEEHHHhhCccccccccccccceeccccCCCCceEEE
Confidence 2255566655 5555555543322 2333221 1 11222221 234567889
Q ss_pred CCCCCEEEEEECCCcEEEEEeecCCCC-CceeeecCCCCCcCeEEEEEcC--CCCEEEEE
Q psy6127 357 DPEGLAFAIGVNSDSIKLYDVRSYDKG-PFASFKCPGERGCEWTGLKFSP--DGKLILVS 413 (515)
Q Consensus 357 s~~~~~l~~g~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~i~~l~~sp--~~~~l~~~ 413 (515)
+++|..+++--..+.|..|+....-.. ....+......-..+.++.+.+ +|...+.+
T Consensus 194 D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 194 DPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS 253 (287)
T ss_dssp ETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred CCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence 999999999889999999998762211 1112222222245667888888 66544443
|
5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.037 Score=54.24 Aligned_cols=140 Identities=14% Similarity=0.200 Sum_probs=96.9
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEE-EECCCcEEEEECCCCce
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILV-STNGSIIRLFDAFNGNC 429 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~-~s~dg~i~iwd~~~~~~ 429 (515)
.-...|-|.+.-++.++.+..+..||-... ........+....++|+.++..++. +-..+.+.+||+.+...
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~agq-------~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eyt 109 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQ-------VILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYT 109 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhcc-------eecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhH
Confidence 344677888877888888889999986642 2222233334447888888876554 45678999999876532
Q ss_pred eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 430 ~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
. .+.....+. -.-..|++.+..++.+...|.+.|++..+.+.+...- .|...+++++|.+.+..+..+
T Consensus 110 q-qLE~gg~~s--~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~G-kh~RRgtq~av~lEd~vil~d 177 (615)
T KOG2247|consen 110 Q-QLESGGTSS--KSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMG-KHQRRGTQIAVTLEDYVILCD 177 (615)
T ss_pred H-HHhccCcch--HHHHhhccCCccccccccccceEEEeccchhhhhhhc-ccccceeEEEecccceeeecC
Confidence 2 222111111 2237899999999999999999999988877666554 399999999999987655433
|
|
| >PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins | Back alignment and domain information |
|---|
Probab=90.71 E-value=22 Score=36.59 Aligned_cols=157 Identities=13% Similarity=0.099 Sum_probs=73.0
Q ss_pred CeEEEEEe---eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCe-
Q psy6127 276 TTAIHAST---KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK- 351 (515)
Q Consensus 276 ~~l~~~s~---~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~- 351 (515)
+.+.++.. .......+.|. .|.....+.........+...++|.+++..+ ..+..+|+. |+.+.........
T Consensus 114 ~gl~~~~~~~~~~~~~~~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~ 189 (477)
T PF05935_consen 114 DGLYFVNGNDWDSSSYTYLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYY 189 (477)
T ss_dssp T-EEEEEETT--BEEEEEEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE
T ss_pred CcEEEEeCCCCCCCceEEEECC-CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCccc
Confidence 44444443 23455666663 3444444432221111166778888776554 788888875 5666666554432
Q ss_pred ---eEEEECCCCCEEEEEEC--------------C---------CcEEEEEeecCCCCCce---------eee--cCCCC
Q psy6127 352 ---PIAAYDPEGLAFAIGVN--------------S---------DSIKLYDVRSYDKGPFA---------SFK--CPGER 394 (515)
Q Consensus 352 ---~~~~~s~~~~~l~~g~~--------------d---------g~i~i~d~~~~~~~~~~---------~~~--~~~~~ 394 (515)
..+...|+|++|+.+.. | ..+..||+...-..... ... .....
T Consensus 190 ~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~D 269 (477)
T PF05935_consen 190 DFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRD 269 (477)
T ss_dssp -B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSB
T ss_pred ccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEECCCCCEEEEEehHHhCCcccccccccccccccccCCCCCC
Confidence 45778899999888771 1 12344555442100000 000 01111
Q ss_pred CcCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCCceeEEeecc
Q psy6127 395 GCEWTGLKFSPDGKLILVSTN-GSIIRLFDAFNGNCVQSLSGV 436 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~~~~~~~~~~~~ 436 (515)
-.-++++.+.|....|+.++. -..|...|.++++....+..+
T Consensus 270 W~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 270 WLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPP 312 (477)
T ss_dssp S--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-S
T ss_pred ccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCC
Confidence 124789999994444444454 458888898888776666543
|
Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A. |
| >KOG4659|consensus | Back alignment and domain information |
|---|
Probab=90.69 E-value=34 Score=38.72 Aligned_cols=27 Identities=11% Similarity=0.166 Sum_probs=21.4
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCEEEE
Q psy6127 482 HPSAVQSLQFNPKYHMLASACSNMAFW 508 (515)
Q Consensus 482 h~~~V~~l~~sp~~~~las~~~dv~iW 508 (515)
|-..+.+++.+|||.+.++-.++.+|=
T Consensus 660 ~lnsp~alaVsPdg~v~IAD~gN~rIr 686 (1899)
T KOG4659|consen 660 KLNSPYALAVSPDGDVIIADSGNSRIR 686 (1899)
T ss_pred ccCCcceEEECCCCcEEEecCCchhhh
Confidence 456788999999999888877776553
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=90.67 E-value=20 Score=35.96 Aligned_cols=146 Identities=17% Similarity=0.208 Sum_probs=85.7
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC-----eEEEEecCCCeeEEEEC---C--CCCEEEEEECCCcEEEEEeecCCCC----C
Q psy6127 319 DDSFISGSYDKTVRVWDLRQPN-----NVGMIQLSGNKPIAAYD---P--EGLAFAIGVNSDSIKLYDVRSYDKG----P 384 (515)
Q Consensus 319 ~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~s---~--~~~~l~~g~~dg~i~i~d~~~~~~~----~ 384 (515)
...|+.||..|.++||+...+. .+-..+...++-.+..- + +...||+ -.-..+.+|.+...... .
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccCc
Confidence 3589999999999999986543 23334555666555432 2 2334444 46778889988543221 0
Q ss_pred ceeeecCCCC--CcCeEEEEEcC----C-CCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 385 FASFKCPGER--GCEWTGLKFSP----D-GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 385 ~~~~~~~~~~--~~~i~~l~~sp----~-~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
...+.....| ......++.-| . -.++.+-+.||.+.+|+-+.....+.+.... . +..++|.+.-..+++
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~l-l---PgPl~Y~~~tDsfvt 191 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFL-L---PGPLCYCPRTDSFVT 191 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCC-C---CcCeEEeecCCEEEE
Confidence 0111111111 11222344433 2 2578888999999999966554444444321 2 345778887777888
Q ss_pred EeCCCcEEEEEC
Q psy6127 458 GSTDGQVHIWNA 469 (515)
Q Consensus 458 gs~dg~I~iwd~ 469 (515)
++.+..+.-|..
T Consensus 192 ~sss~~l~~Yky 203 (418)
T PF14727_consen 192 ASSSWTLECYKY 203 (418)
T ss_pred ecCceeEEEecH
Confidence 777777777654
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=90.52 E-value=1.4 Score=27.97 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=26.1
Q ss_pred CCeEEEEEcCCCC---EEEEEeCCCcEEEEEcCC
Q psy6127 308 RKVSSLNLSPVDD---SFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 308 ~~v~~l~~~~~~~---~l~s~s~dg~i~iwd~~~ 338 (515)
+.|.+++|+|++. +|+.+-.-|.|.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4689999998544 888888889999999995
|
It contains a characteristic DLL sequence motif. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=90.42 E-value=16 Score=34.46 Aligned_cols=222 Identities=15% Similarity=0.127 Sum_probs=120.6
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECC------CC-eeeeEecC-----CCCceeEEEEecCCCe------------E
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCE------QG-TSKNTINS-----KKYGVDLIKFTHSKTT------------A 278 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~------~~-~~~~~~~~-----~~~~v~~~~~~~~~~~------------l 278 (515)
.-+.|+|+|.+.+-++....+...+||.. .. ..+-++.. .....+.+.|+..... +
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 34789999998887777778999999986 11 22333332 2345777888754332 2
Q ss_pred EEEEeeCCCeEEEEECCCCee-----eEEec-CCCCCe-EEEEEcCC--CCEEEEEe-CCCcEEEEEcCCCCeEE--EEe
Q psy6127 279 IHASTKVDATLRYLSLHDNKY-----VRYFP-GHVRKV-SSLNLSPV--DDSFISGS-YDKTVRVWDLRQPNNVG--MIQ 346 (515)
Q Consensus 279 ~~~s~~~d~~v~vwd~~~~~~-----~~~~~-~h~~~v-~~l~~~~~--~~~l~s~s-~dg~i~iwd~~~~~~~~--~~~ 346 (515)
+++ ++||+|.-|...-+.. ...+. ...+.| ..+++... +.+|+.+. ..++|.++|-.-..... .+.
T Consensus 104 if~--tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~ 181 (336)
T TIGR03118 104 LFV--TEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI 181 (336)
T ss_pred EEE--eCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence 333 4899999998532222 12222 112333 34555433 45555553 57889888754322110 010
Q ss_pred cC---------------CC--eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC----
Q psy6127 347 LS---------------GN--KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP---- 405 (515)
Q Consensus 347 ~~---------------~~--~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp---- 405 (515)
.. +. +.-..-+++++.=+.|..-|.|.+||....- .+.+.....-+. ...++..|
T Consensus 182 DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l---~~r~as~g~LNa-PWG~a~APa~FG 257 (336)
T TIGR03118 182 DPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQL---LRRVASSGRLNA-PWGLAIAPESFG 257 (336)
T ss_pred CCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcE---EEEeccCCcccC-CceeeeChhhhC
Confidence 00 00 0001112222222334445788999887521 122222222233 33777766
Q ss_pred --CCCEEEEEECCCcEEEEECCCCceeEEeeccccC---CCCCEEEEEec
Q psy6127 406 --DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN---NASPLEATFTP 450 (515)
Q Consensus 406 --~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~---~~~i~~~~~sp 450 (515)
.+..|+---.||+|..||..+++.+-.+....+. ...++.++|..
T Consensus 258 ~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 258 SLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 3556655557999999999999887777654332 12356667754
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=90.24 E-value=15 Score=33.96 Aligned_cols=234 Identities=12% Similarity=0.104 Sum_probs=149.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
..-..++-.|||..-+++...+.|--.|..+|+....--+....-..+..-||+..-++=+ ...|.-.|-++.+..+
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~---~~aI~R~dpkt~evt~ 138 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDT---GLAIGRLDPKTLEVTR 138 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecC---cceeEEecCcccceEE
Confidence 4556788889998888888888888889888887766656666667778888887555432 1155556655544321
Q ss_pred -E--ecCCCCCeEEEEEcCCCCEEEEEeCC---------CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC
Q psy6127 302 -Y--FPGHVRKVSSLNLSPVDDSFISGSYD---------KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 302 -~--~~~h~~~v~~l~~~~~~~~l~s~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
. .+.-........|.+.|++-+++... +.|++|+.- .......++..|+|..-++.-.+
T Consensus 139 f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaP---------qG~gpyGi~atpdGsvwyaslag 209 (353)
T COG4257 139 FPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAP---------QGGGPYGICATPDGSVWYASLAG 209 (353)
T ss_pred eecccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccC---------CCCCCcceEECCCCcEEEEeccc
Confidence 1 12234567888899999988877531 234444433 22346779999999998888788
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
..|-..|...+... .+..+......-+.+--+|.|..-++....+.+..+|..+... .++.. .+......++...
T Consensus 210 naiaridp~~~~ae---v~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW-~eypL-Pgs~arpys~rVD 284 (353)
T COG4257 210 NAIARIDPFAGHAE---VVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSW-IEYPL-PGSKARPYSMRVD 284 (353)
T ss_pred cceEEcccccCCcc---eecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccc-eeeeC-CCCCCCcceeeec
Confidence 88888887665321 2222333233345677778888877777778888888765542 22221 1122224566666
Q ss_pred cCCCEEEEEeCCCcEEEEECCCC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
..++.-.+--..|.|.-+|.++-
T Consensus 285 ~~grVW~sea~agai~rfdpeta 307 (353)
T COG4257 285 RHGRVWLSEADAGAIGRFDPETA 307 (353)
T ss_pred cCCcEEeeccccCceeecCcccc
Confidence 66665555445566766776543
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=90.05 E-value=0.62 Score=49.40 Aligned_cols=181 Identities=9% Similarity=0.133 Sum_probs=101.8
Q ss_pred CCCeEEEEECCCCee-eEEecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCC--CCeEEEE------ecCCCeeEE
Q psy6127 285 VDATLRYLSLHDNKY-VRYFPGHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLRQ--PNNVGMI------QLSGNKPIA 354 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~--~~~~~~~------~~~~~~~~~ 354 (515)
..+.+++-+..+... -...++..+.|-.+.|... ...+. -.-|.+.+||+.- |+....+ .....+.-+
T Consensus 109 ~~~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V 186 (1283)
T KOG1916|consen 109 MENGVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLV 186 (1283)
T ss_pred hhhhhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCccee
Confidence 456666666544321 1234566777777777432 22222 2336788898753 3322222 222334455
Q ss_pred EECC---CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEE-----------EEEcCCCCEEEEEECCCcEE
Q psy6127 355 AYDP---EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTG-----------LKFSPDGKLILVSTNGSIIR 420 (515)
Q Consensus 355 ~~s~---~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~-----------l~~sp~~~~l~~~s~dg~i~ 420 (515)
.|.| +..++.++-.++.+++........ .....|...+.. -..||||..++.++.||.++
T Consensus 187 ~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~------~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~ 260 (1283)
T KOG1916|consen 187 SWCPIAVNKVYICYGLKGGEIRLLNINRALR------SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVG 260 (1283)
T ss_pred eecccccccceeeeccCCCceeEeeechHHH------HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccc
Confidence 5554 667788888899999877665321 111113322222 23799999999999999988
Q ss_pred EEECC-----CCceeEEeeccccCCCCCEEEEEecC-------C--CEEEEEeC-CCcEEEEECCCCeEE
Q psy6127 421 LFDAF-----NGNCVQSLSGVLNNNASPLEATFTPD-------S--QFVASGST-DGQVHIWNAERGYKV 475 (515)
Q Consensus 421 iwd~~-----~~~~~~~~~~~~~~~~~i~~~~~sp~-------g--~~l~sgs~-dg~I~iwd~~~~~~~ 475 (515)
.|.+. ...|+...+.|..+.. + |.-++.+ + .+++++++ +..+++|.....+|+
T Consensus 261 f~Qiyi~g~~~~rclhewkphd~~p~-v-C~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 261 FYQIYITGKIVHRCLHEWKPHDKHPR-V-CWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred eeeeeeeccccHhhhhccCCCCCCCc-e-eeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 88653 3455566666554432 1 2223221 1 23445543 456999998877776
|
|
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=89.76 E-value=24 Score=35.61 Aligned_cols=31 Identities=16% Similarity=0.559 Sum_probs=25.6
Q ss_pred CCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
.+..++..+..+.+++.+.+|.|.+|++..+
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~ 221 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGPG 221 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-SS
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeCC
Confidence 3889999998999999999999999999743
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=89.71 E-value=14 Score=32.89 Aligned_cols=146 Identities=16% Similarity=0.168 Sum_probs=78.0
Q ss_pred CEEEEEeCCCcEEEEEcCC--CCeEEEEecCCCeeEEEECCCCCEEEEEECC---C---cEEEE---EeecCCCCCcee-
Q psy6127 320 DSFISGSYDKTVRVWDLRQ--PNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS---D---SIKLY---DVRSYDKGPFAS- 387 (515)
Q Consensus 320 ~~l~s~s~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g---~i~i~---d~~~~~~~~~~~- 387 (515)
+.|+.+...+.|.+|++.. .+....+..-+.+..+.++..|+++++--.+ . .+|+| .....+..+...
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR 108 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR 108 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence 4444446668899999983 3445666666779999999999999986432 2 55665 221111111110
Q ss_pred -----------------eec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce-eE-----Eeeccc-c--CC
Q psy6127 388 -----------------FKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC-VQ-----SLSGVL-N--NN 440 (515)
Q Consensus 388 -----------------~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~-~~-----~~~~~~-~--~~ 440 (515)
+.. .-+-..++.+++..|-..-|++|+. +.+.+|.+..... .. .+..+. . ..
T Consensus 109 iaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~~~~ 187 (215)
T PF14761_consen 109 IAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCG-NKLVLFTLKYQTIQSEKFSFLDFERSLIDHIDN 187 (215)
T ss_pred EcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcC-CEEEEEEEEEEEEecccccEEechhhhhheecC
Confidence 000 0111334557777774444555554 5788887654332 11 110000 0 11
Q ss_pred CCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 441 ASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
..+..+++. +.|+|..+ +-.+++..+
T Consensus 188 ~~p~~v~ic--~~yiA~~s-~~ev~Vlkl 213 (215)
T PF14761_consen 188 FKPTQVAIC--EGYIAVMS-DLEVLVLKL 213 (215)
T ss_pred ceEEEEEEE--eeEEEEec-CCEEEEEEE
Confidence 113445554 56777665 445666654
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=89.63 E-value=15 Score=32.85 Aligned_cols=60 Identities=12% Similarity=0.176 Sum_probs=38.8
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN 415 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~ 415 (515)
...++-.+. +.|..+.....|.+|++......+...+. .-+.|..+.++..|+|+++--.
T Consensus 20 P~~~c~~g~-d~Lfva~~g~~Vev~~l~~~~~~~~~~F~----Tv~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 20 PTAVCCGGP-DALFVAASGCKVEVYDLEQEECPLLCTFS----TVGRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred cceeeccCC-ceEEEEcCCCEEEEEEcccCCCceeEEEc----chhheeEEEeccccceEEEEEe
Confidence 444444433 34434467788999999954433333333 3367889999999999998653
|
|
| >PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A | Back alignment and domain information |
|---|
Probab=89.41 E-value=29 Score=36.02 Aligned_cols=232 Identities=14% Similarity=0.089 Sum_probs=108.6
Q ss_pred cCCCeEEEEEeeCCCeEEEEECCCCee--eEEecCC-CCCeEEEEEcCCC-CEEEEEeC--CCcEEEEEcCCCCeEEEEe
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLHDNKY--VRYFPGH-VRKVSSLNLSPVD-DSFISGSY--DKTVRVWDLRQPNNVGMIQ 346 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~~~~~--~~~~~~h-~~~v~~l~~~~~~-~~l~s~s~--dg~i~iwd~~~~~~~~~~~ 346 (515)
.++..++++. .+|.+....+..... ....-+. ....+++.+..+| .+++.||. |+.+.-|....-+.+..+.
T Consensus 220 ~~~~~~lL~~--e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~ 297 (504)
T PF10433_consen 220 KDGDRILLQD--EDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLP 297 (504)
T ss_dssp TTSSEEEEEE--TTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE-
T ss_pred CCCCEEEEEe--CCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEecc
Confidence 4455566654 799999888765441 1222222 4556677777655 36777776 4455555544445556666
Q ss_pred cCCCeeEEEECCC----CC------EEEEEE---CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEE
Q psy6127 347 LSGNKPIAAYDPE----GL------AFAIGV---NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILV 412 (515)
Q Consensus 347 ~~~~~~~~~~s~~----~~------~l~~g~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~ 412 (515)
.-+++..+++-+. .. .+++++ .+|.+++..-.-.-............ -..+..+.... +..+++.
T Consensus 298 N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~-v~~iW~l~~~~~~~~~lv~ 376 (504)
T PF10433_consen 298 NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPG-VTGIWTLKLSSSDHSYLVL 376 (504)
T ss_dssp ---SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEEST-EEEEEEE-SSSSSBSEEEE
T ss_pred CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCC-ceEEEEeeecCCCceEEEE
Confidence 5566777666421 11 455554 46677776432111000001110111 22233343322 2457777
Q ss_pred EECCCcEEEEECC---CCceeEEee--ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeE
Q psy6127 413 STNGSIIRLFDAF---NGNCVQSLS--GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQ 487 (515)
Q Consensus 413 ~s~dg~i~iwd~~---~~~~~~~~~--~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 487 (515)
+..+. -+++.+. ....+.... +.......+ .+.... +..++=....+ |++.+...++............|.
T Consensus 377 S~~~~-T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl-~~~~~~-~~~ivQVt~~~-i~l~~~~~~~~~~~w~~~~~~~I~ 452 (504)
T PF10433_consen 377 SFPNE-TRVLQISEGDDGEEVEEVEEDGFDTDEPTL-AAGNVG-DGRIVQVTPKG-IRLIDLEDGKLTQEWKPPAGSIIV 452 (504)
T ss_dssp EESSE-EEEEEES----SSEEEEE---TS-SSS-EE-EEEEET-TTEEEEEESSE-EEEEESSSTSEEEEEE-TTS---S
T ss_pred EcCCc-eEEEEEecccCCcchhhhhhccCCCCCCCe-EEEEcC-CCeEEEEecCe-EEEEECCCCeEEEEEeCCCCCeEE
Confidence 66554 4455553 233332221 111111112 222222 44555554444 888988888877766443456677
Q ss_pred EEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 488 SLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 488 ~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
+.+.+...-.++.+++.+..+.++
T Consensus 453 ~a~~~~~~v~v~~~~~~~~~~~~~ 476 (504)
T PF10433_consen 453 AASINDPQVLVALSGGELVYFELD 476 (504)
T ss_dssp EEEESSSEEEEEE-TTEEEEEEEE
T ss_pred EEEECCCEEEEEEeCCcEEEEEEE
Confidence 777776544555555666666554
|
... |
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.37 E-value=9.6 Score=37.67 Aligned_cols=159 Identities=11% Similarity=0.046 Sum_probs=88.5
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-CCCCCcCeE-EEEEcCCCCEEEEEECCCcEEEE-ECCCC
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-PGERGCEWT-GLKFSPDGKLILVSTNGSIIRLF-DAFNG 427 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~-~l~~sp~~~~l~~~s~dg~i~iw-d~~~~ 427 (515)
+..+-..|||+.+..-+. .++.++++.+......+.... ++.....|+ .+..-..|.-+++++.||.|.-| |++.+
T Consensus 223 v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~ 301 (733)
T COG4590 223 VSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRD 301 (733)
T ss_pred hHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecC
Confidence 555778999999887655 788899887643221111111 111111222 22223356678888899988877 55433
Q ss_pred ce--eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-CC
Q psy6127 428 NC--VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-SN 504 (515)
Q Consensus 428 ~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-~d 504 (515)
.. ........-...++..+.-..+.+-+++-+..|++.++.....+.+..-. --..+.-+++||.+.++++-+ +.
T Consensus 302 ~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~--~~~~~~~~~~Sp~~~~Ll~e~~gk 379 (733)
T COG4590 302 GQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER--AYQAPQLVAMSPNQAYLLSEDQGK 379 (733)
T ss_pred CCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhh--hhcCcceeeeCcccchheeecCCc
Confidence 21 11111111111222222222234566777788888887755544443322 223566789999999888876 45
Q ss_pred EEEEcCCC
Q psy6127 505 MAFWIPTL 512 (515)
Q Consensus 505 v~iW~~~~ 512 (515)
++++.++.
T Consensus 380 i~~~~l~N 387 (733)
T COG4590 380 IRLAQLEN 387 (733)
T ss_pred eEEEEecC
Confidence 88877653
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=89.07 E-value=24 Score=34.52 Aligned_cols=40 Identities=13% Similarity=-0.055 Sum_probs=21.5
Q ss_pred CcEEEEEcCCCCeEEEEecCC--CeeEEEECCCCCEEEEEEC
Q psy6127 329 KTVRVWDLRQPNNVGMIQLSG--NKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 329 g~i~iwd~~~~~~~~~~~~~~--~~~~~~~s~~~~~l~~g~~ 368 (515)
..+..||..+.+....-.... .........++++++.|+.
T Consensus 168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~ 209 (346)
T TIGR03547 168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGNKLLLINGE 209 (346)
T ss_pred ceEEEEECCCCceeECccCCCCcCCCceEEEECCEEEEEeee
Confidence 457889988776544322221 1112222346777777764
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=88.68 E-value=2.8 Score=26.11 Aligned_cols=40 Identities=20% Similarity=0.142 Sum_probs=29.5
Q ss_pred CCCCEEEEEe-CCCcEEEEEcCCCCeEEEEecCCCeeEEEE
Q psy6127 317 PVDDSFISGS-YDKTVRVWDLRQPNNVGMIQLSGNKPIAAY 356 (515)
Q Consensus 317 ~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 356 (515)
|+++.|+++. .+++|.++|..+++.+..+........++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 5677666655 578999999999988888876655555555
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.64 E-value=31 Score=35.38 Aligned_cols=273 Identities=11% Similarity=0.039 Sum_probs=136.5
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCC-CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKK-YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
..+|..+.+...|. +..|+.|| +..||..+++....-.... .+|..+.-...+ .+.+++ |.-+++.+.+..+.
T Consensus 164 d~~V~aLv~D~~g~-lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGT---dqGv~~~e~~G~~~ 237 (671)
T COG3292 164 DTPVVALVFDANGR-LWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGT---DQGVYLQEAEGWRA 237 (671)
T ss_pred CccceeeeeeccCc-EEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEe---ccceEEEchhhccc
Confidence 56788888888874 56688888 6778877777765544333 455555544444 355554 66777777665322
Q ss_pred eEEecC-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC---CCeeEEEECCCCCEEEEEECCCcEEEE
Q psy6127 300 VRYFPG-HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS---GNKPIAAYDPEGLAFAIGVNSDSIKLY 375 (515)
Q Consensus 300 ~~~~~~-h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~s~~~~~l~~g~~dg~i~i~ 375 (515)
...... ....|..+.-..+| .+-.|+..|-.+.---+.+-.....+.+ ..+.++..+.+|.. -+++.+|.+++-
T Consensus 238 sn~~~~lp~~~I~ll~qD~qG-~lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGsL-Wv~t~~giv~~~ 315 (671)
T COG3292 238 SNWGPMLPSGNILLLVQDAQG-ELWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGSL-WVGTYGGIVRYL 315 (671)
T ss_pred cccCCCCcchheeeeecccCC-CEEEeecccceeEecCCCCccccccccCCccccccceeeccCCCE-eeeccCceEEEe
Confidence 221111 22334443333333 3455555554332222222111111111 22455666666654 445555555543
Q ss_pred EeecCCCCCceeeecCCCCCcCeEEEEEcC--CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
+..- .....+.... ...+...+.+| .+..+-.....|.+.+-+-.+|..++......+ ..|+..++..+|+
T Consensus 316 ~a~w---~~ma~in~~d--G~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg--~nit~~~~d~~g~ 388 (671)
T COG3292 316 TADW---KRMAVINDSD--GGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRG--MNITTTLEDSRGR 388 (671)
T ss_pred cchh---hheeeeecCC--CchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccc--cccchhhhccCCc
Confidence 3221 0000111110 11111111122 122222222333455555566666665433332 3367777777554
Q ss_pred EEEEEeCCCcEEEEECCC-CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcC
Q psy6127 454 FVASGSTDGQVHIWNAER-GYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIP 510 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~ 510 (515)
+-.|+...-+..|+.++ +.......+...++|..+.=.|+++ |-.++.++-+|..
T Consensus 389 -lWlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk~~ 444 (671)
T COG3292 389 -LWLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKRD 444 (671)
T ss_pred -EEEEecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEecC
Confidence 44555553466677776 5555555555667899999999888 5556555555543
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=88.59 E-value=20 Score=32.99 Aligned_cols=146 Identities=14% Similarity=0.168 Sum_probs=80.0
Q ss_pred EEEEcCCCCeEEEEecCCCee--EEEECCCCCEEEEEEC-C--CcEEEEEeec-CCCCCceeeecCCCCCcCeEEEEEcC
Q psy6127 332 RVWDLRQPNNVGMIQLSGNKP--IAAYDPEGLAFAIGVN-S--DSIKLYDVRS-YDKGPFASFKCPGERGCEWTGLKFSP 405 (515)
Q Consensus 332 ~iwd~~~~~~~~~~~~~~~~~--~~~~s~~~~~l~~g~~-d--g~i~i~d~~~-~~~~~~~~~~~~~~~~~~i~~l~~sp 405 (515)
.+||+.+++.... ....... .-.+-+||+++.+|+. + ..+++++... ............-.....-.+..--|
T Consensus 49 ~~yD~~tn~~rpl-~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 49 VEYDPNTNTFRPL-TVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEecCCCcEEec-cCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 5788888765432 2222222 3457789999999874 2 3577877544 11111111111112222333566678
Q ss_pred CCCEEEEEECCC-cEEEEECCC-CceeEEe---ecc--ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 406 DGKLILVSTNGS-IIRLFDAFN-GNCVQSL---SGV--LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 406 ~~~~l~~~s~dg-~i~iwd~~~-~~~~~~~---~~~--~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
||+.|+.|+... +..+|.-.. ......+ ... ......-..+...|+|++++.+..+. .|||..+++.+..+
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~l 205 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTL 205 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeC
Confidence 999999988764 344555321 1111111 100 00111123567789999998887554 57799888877777
Q ss_pred cC
Q psy6127 479 DG 480 (515)
Q Consensus 479 ~~ 480 (515)
+.
T Consensus 206 P~ 207 (243)
T PF07250_consen 206 PD 207 (243)
T ss_pred CC
Confidence 65
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=88.23 E-value=12 Score=37.98 Aligned_cols=113 Identities=14% Similarity=0.139 Sum_probs=61.0
Q ss_pred CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCC------CEEEEEE------
Q psy6127 349 GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDG------KLILVST------ 414 (515)
Q Consensus 349 ~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~------~~l~~~s------ 414 (515)
.....++|.|+|++|++--..|.|++++-..........+.. ..........|+++|+- .+|++..
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~ 109 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGD 109 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCC
Confidence 347889999999888776557999998765433221111111 11124567799999884 3455442
Q ss_pred ----CCCcEEEEECCCC--c---eeEEeeccc-cCCCCCEEEEEecCCCEEEEEeCC
Q psy6127 415 ----NGSIIRLFDAFNG--N---CVQSLSGVL-NNNASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 415 ----~dg~i~iwd~~~~--~---~~~~~~~~~-~~~~~i~~~~~sp~g~~l~sgs~d 461 (515)
....|.-|.+... . ....+.... .....-..++|.|||.+.++.++.
T Consensus 110 ~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 110 KELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred CCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCC
Confidence 1223444544321 1 111121110 011123578899999877655543
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=87.86 E-value=0.065 Score=52.61 Aligned_cols=141 Identities=10% Similarity=0.066 Sum_probs=97.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
.......|-|.+.-++.++.+..+..||-. ++...... .++....++|..+++.+++.. ...+.+.+||+.+.....
T Consensus 35 v~pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDkegdvlavlA-ek~~piylwd~n~eytqq 111 (615)
T KOG2247|consen 35 VGPIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDKEGDVLAVLA-EKTGPIYLWDVNSEYTQQ 111 (615)
T ss_pred cccceeeEecCCCceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhccccchhhhhh-hcCCCeeechhhhhhHHH
Confidence 334455678877778889999999999955 44433333 335566788888888777666 368999999997654322
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEE
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~ 365 (515)
.-.+.+..-.-+.|++....++.+-..|.+.+++..+.+...... +...+...++.+.+..+..
T Consensus 112 LE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~ 176 (615)
T KOG2247|consen 112 LESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILC 176 (615)
T ss_pred HhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeec
Confidence 112222222237899988889999899999999988776655553 5566888888887755543
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=87.85 E-value=14 Score=30.28 Aligned_cols=111 Identities=8% Similarity=0.090 Sum_probs=67.9
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCe--------eeeEecCCCCceeEEEEec-----CCCeEEEEEeeCCCeEEE
Q psy6127 225 NSLDYSSDGSLLISCSDDDQIIIYDCEQGT--------SKNTINSKKYGVDLIKFTH-----SKTTAIHASTKVDATLRY 291 (515)
Q Consensus 225 ~~l~~spd~~~lasgs~dg~i~iwd~~~~~--------~~~~~~~~~~~v~~~~~~~-----~~~~l~~~s~~~d~~v~v 291 (515)
..-+|......|+.++.-|.|.|++..... .+..+.. ...|++++-.+ ..+.+++++ ...+..
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNi-n~~italaaG~l~~~~~~D~LliGt---~t~lla 77 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNI-NQEITALAAGRLKPDDGRDCLLIGT---QTSLLA 77 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEEC-CCceEEEEEEecCCCCCcCEEEEec---cceEEE
Confidence 344676667789999999999999876432 2333332 35577775544 234455554 889999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcC----CCCEEEEEeCCCcEEEEEcCCCCe
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSP----VDDSFISGSYDKTVRVWDLRQPNN 341 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~----~~~~l~s~s~dg~i~iwd~~~~~~ 341 (515)
||+..+..+..- .-.+.|+++.+-. +.+.++. +.+..|.-||....+.
T Consensus 78 YDV~~N~d~Fyk-e~~DGvn~i~~g~~~~~~~~l~iv-GGncsi~Gfd~~G~e~ 129 (136)
T PF14781_consen 78 YDVENNSDLFYK-EVPDGVNAIVIGKLGDIPSPLVIV-GGNCSIQGFDYEGNEI 129 (136)
T ss_pred EEcccCchhhhh-hCccceeEEEEEecCCCCCcEEEE-CceEEEEEeCCCCcEE
Confidence 999887655432 3346677776632 2334444 4456666666554443
|
|
| >PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
Probab=87.83 E-value=40 Score=35.69 Aligned_cols=166 Identities=11% Similarity=0.097 Sum_probs=87.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC--eEEEEecCCCeeEE---EEC------CCCCEEEEEEC-C---Cc
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN--NVGMIQLSGNKPIA---AYD------PEGLAFAIGVN-S---DS 371 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~~~~~~---~~s------~~~~~l~~g~~-d---g~ 371 (515)
.+.|..+.|.++++.++....+|.|.+||...+. .+..+...... .+ .|- ....++++.+. + -.
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~-~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~ 207 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSI-NVSYSKFVNDFELENGKDLLLTVSQLSNSKLS 207 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEecccccccccccccccccc-ceehhhhhcccccccCCceEEEEEEcCCCcEE
Confidence 5679999999999999999999999999993322 11122111111 11 111 12334444433 2 24
Q ss_pred EEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc--cCC-CCCEEE
Q psy6127 372 IKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL--NNN-ASPLEA 446 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~--~~~-~~i~~~ 446 (515)
.+++.+.. .......+.. .......=..+++. +|. ++.- .+++|.+|++...+..+++.... ... ..+.++
T Consensus 208 ykL~~l~~-~~~~~~El~s~~~e~~~~~~s~f~Y~-~G~-LY~l-~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl 283 (670)
T PF10395_consen 208 YKLISLSN-ESSSIFELSSTILENFGLEDSKFCYQ-FGK-LYQL-SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSL 283 (670)
T ss_pred EEEEEecc-CCcceEEeehheeccCCcccceEEEe-CCE-EEEE-eCCEEEEEEcCCceEEEEEEechhhccccccceEe
Confidence 56777721 2222222221 11111111133333 443 3222 67799999998887776665431 111 123333
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc
Q psy6127 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD 479 (515)
Q Consensus 447 ~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~ 479 (515)
.--...+.|.+ .+++|++.|+.-...+..+.
T Consensus 284 ~~~s~nRvLLs--~~nkIyLld~~~~siLse~~ 314 (670)
T PF10395_consen 284 KPPSPNRVLLS--VNNKIYLLDLKFESILSEFE 314 (670)
T ss_pred ecCCCCeEEEE--cCCEEEEEeehhhhhhhhhh
Confidence 32223444443 46789999987666665555
|
It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex []. |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=86.63 E-value=37 Score=34.46 Aligned_cols=26 Identities=15% Similarity=0.045 Sum_probs=20.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy6127 309 KVSSLNLSPVDDSFISGSYDKTVRVW 334 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s~dg~i~iw 334 (515)
.|..+..++.|..++-+|.+|.+..+
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVME 130 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEE
Confidence 46778888999999888888876554
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=84.81 E-value=45 Score=33.33 Aligned_cols=152 Identities=15% Similarity=0.139 Sum_probs=80.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-eEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC---Cc
Q psy6127 310 VSSLNLSPVDDSFISGSYDKTVRVWDLRQPN-NVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG---PF 385 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~---~~ 385 (515)
...+...+++.+++.+.....++-||-.... ..........+..+.+.+++..++++ ..|.+.. ....+..- ..
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f 318 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDF 318 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccce
Confidence 4445667777766665543333334432211 11222334457788899999888776 4555433 22222110 01
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
..... ......+..+.|.+++..+++ +..|.+.... ..|+.-........-....+.+.|.++++.+++| .+|.|.
T Consensus 319 ~~~~~-~~~~~~l~~v~~~~d~~~~a~-G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il 394 (398)
T PLN00033 319 EEADI-KSRGFGILDVGYRSKKEAWAA-GGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLL 394 (398)
T ss_pred eeccc-CCCCcceEEEEEcCCCcEEEE-ECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEE
Confidence 11111 112245788999988776554 5667655543 4454433332112223347889998877766655 677765
Q ss_pred EE
Q psy6127 466 IW 467 (515)
Q Consensus 466 iw 467 (515)
-|
T Consensus 395 ~~ 396 (398)
T PLN00033 395 RY 396 (398)
T ss_pred Ee
Confidence 44
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=84.37 E-value=5.8 Score=24.61 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=24.8
Q ss_pred CCCCEEEEEe-CCCeEEEEECCCCeeeeEecCC
Q psy6127 231 SDGSLLISCS-DDDQIIIYDCEQGTSKNTINSK 262 (515)
Q Consensus 231 pd~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~ 262 (515)
|++++|+++. .+++|.++|..+++.+..+...
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg 33 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG 33 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence 5777766655 5789999999988888777653
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12 | Back alignment and domain information |
|---|
Probab=83.74 E-value=41 Score=31.97 Aligned_cols=171 Identities=18% Similarity=0.189 Sum_probs=92.2
Q ss_pred CeEEEEECCCCeeeEEecC------CCCCeEEEEEcCCC-----CEEEEE-eCCCcEEEEEcCCCCeEEEEec-------
Q psy6127 287 ATLRYLSLHDNKYVRYFPG------HVRKVSSLNLSPVD-----DSFISG-SYDKTVRVWDLRQPNNVGMIQL------- 347 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~------h~~~v~~l~~~~~~-----~~l~s~-s~dg~i~iwd~~~~~~~~~~~~------- 347 (515)
-.+.+||+.+++.++++.- ..+.+..+.+.... .+.+.+ +..+.|.++|+.+++..+....
T Consensus 34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~ 113 (287)
T PF03022_consen 34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPD 113 (287)
T ss_dssp -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-S
T ss_pred cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceecc
Confidence 3677888888887776532 24567888887632 233333 3346899999999877665522
Q ss_pred -------------CCCeeEEEECC---CCCEEEEEECCCcEEEEEeecC--CCCC---ce----eeecCCCCCcCeEEEE
Q psy6127 348 -------------SGNKPIAAYDP---EGLAFAIGVNSDSIKLYDVRSY--DKGP---FA----SFKCPGERGCEWTGLK 402 (515)
Q Consensus 348 -------------~~~~~~~~~s~---~~~~l~~g~~dg~i~i~d~~~~--~~~~---~~----~~~~~~~~~~~i~~l~ 402 (515)
...+..++.+| +++.|....-.+. ++|.+.+. .... .. .+...+.......+++
T Consensus 114 ~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~ 192 (287)
T PF03022_consen 114 AGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMA 192 (287)
T ss_dssp SEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEE
T ss_pred ccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC-cEEEEEHHHhhCccccccccccccceeccccCCCCceEE
Confidence 12233455544 6666666654332 33443321 1100 00 1111111123445789
Q ss_pred EcCCCCEEEEEECCCcEEEEECCCCc---eeEEeeccccCCCCCEEEEEec--CCCEEEEE
Q psy6127 403 FSPDGKLILVSTNGSIIRLFDAFNGN---CVQSLSGVLNNNASPLEATFTP--DSQFVASG 458 (515)
Q Consensus 403 ~sp~~~~l~~~s~dg~i~iwd~~~~~---~~~~~~~~~~~~~~i~~~~~sp--~g~~l~sg 458 (515)
++++|..+++--..+.|..|+..+.- ....+......-..+..+.+.+ +|.+.+..
T Consensus 193 ~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 193 IDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS 253 (287)
T ss_dssp EETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred ECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence 99999888888889999999987621 2222322221123467888888 66655544
|
5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=83.49 E-value=33 Score=38.83 Aligned_cols=153 Identities=11% Similarity=0.141 Sum_probs=90.4
Q ss_pred EEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEc-C-------CCCEEEEEeCCCcEEEEEcC--
Q psy6127 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLS-P-------VDDSFISGSYDKTVRVWDLR-- 337 (515)
Q Consensus 268 ~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~-~-------~~~~l~s~s~dg~i~iwd~~-- 337 (515)
.+-+.|.=.+.-+. -|+.+.+|+.+++.....+.+-...|..+..- | .=+++..-+.--.|.++-+.
T Consensus 83 ~mGiFpeI~RaWiT---iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~ 159 (1311)
T KOG1900|consen 83 DMGIFPEIGRAWIT---IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFD 159 (1311)
T ss_pred eeccchhhcceEEE---eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEec
Confidence 34444443343333 49999999999988777777777767666532 2 22333333333445554332
Q ss_pred --CCCeE-----EEEec-CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC--------------------Cceeee
Q psy6127 338 --QPNNV-----GMIQL-SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG--------------------PFASFK 389 (515)
Q Consensus 338 --~~~~~-----~~~~~-~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~--------------------~~~~~~ 389 (515)
++... ..+.. +-.+.++....+|+.+.+| .|| .+|.+.-.... ....+.
T Consensus 160 ~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~ 236 (1311)
T KOG1900|consen 160 EFTGELSIFNTSFKISVDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLS 236 (1311)
T ss_pred cccCcccccccceeeecCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhc
Confidence 21111 11122 3346778877788887776 555 45544321100 000112
Q ss_pred cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy6127 390 CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 390 ~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~ 426 (515)
.++.+..+|..++....-..+.+-++.|+|.+||+..
T Consensus 237 ~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 237 VPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 2245677899999998888999999999999999875
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=82.62 E-value=5.7 Score=41.79 Aligned_cols=74 Identities=18% Similarity=0.264 Sum_probs=44.2
Q ss_pred CCCCEEEEEECCCcEEEEECCC----CceeEEe-----------ecc--------ccCCCCCEEEEEec----CCCEEEE
Q psy6127 405 PDGKLILVSTNGSIIRLFDAFN----GNCVQSL-----------SGV--------LNNNASPLEATFTP----DSQFVAS 457 (515)
Q Consensus 405 p~~~~l~~~s~dg~i~iwd~~~----~~~~~~~-----------~~~--------~~~~~~i~~~~~sp----~g~~l~s 457 (515)
++...++++..||.+....... +...... .+. ..........++++ +..+|++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 3556777788888877776553 2111111 110 01122345566666 6789999
Q ss_pred EeCCCcEEEEECCCCeEEEEE
Q psy6127 458 GSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 458 gs~dg~I~iwd~~~~~~~~~~ 478 (515)
.+.|+++|+||+.+++++...
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEe
Confidence 999999999999999997665
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=82.23 E-value=61 Score=34.79 Aligned_cols=218 Identities=11% Similarity=0.114 Sum_probs=101.8
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCC------CceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKK------YGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
.-.+.|.+.+||.|.+.++....+.+|.+++-. -.++....-.. +.-..+.|......+- +..-..++-
T Consensus 110 ~v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k~-fd~ise~~L~~~dl~ef~khi~VgWgkketqfr----gk~~raqlr 184 (1243)
T COG5290 110 KVSNGIVAASWSADEKTWCVVTSTREILLFDKY-FDPISEYHLKKSDLVEFGKHIRVGWGKKETQFR----GKGARAQLR 184 (1243)
T ss_pred cccCceEEEeeccCCceEEEEEcCceEEEEecc-ccccchhhcchhHHHHhccceEeeecccchhcc----ccchhhhcc
Confidence 346789999999999987777778889888743 22221111000 1112233332211110 000011111
Q ss_pred EC------CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCE
Q psy6127 293 SL------HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD----KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 293 d~------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~ 362 (515)
|. +.|+..... .| =.-+.|-.|..+.+.+... ..+++|.-+..--...-+..+.-..++|-|+|..
T Consensus 185 dptmp~~vD~G~l~avd-~~---k~~i~wrgD~~y~~v~r~Ee~prra~rvysreg~lds~sep~~g~e~~LSWkpqgS~ 260 (1243)
T COG5290 185 DPTMPYMVDYGDLFAVD-TN---KKIIFWRGDTEYNLVGRSEERPRRAFRVYSREGQLDSASEPVTGMEHQLSWKPQGSK 260 (1243)
T ss_pred CCCCcccccccceeEee-CC---ceEEEEccCcceeeecchhcccccceeeeccccccccccCCcccchhccccccCCce
Confidence 11 111111110 01 1234555555555555432 2355554221110111122232345899999999
Q ss_pred EEEEECCC-----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 363 FAIGVNSD-----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 363 l~~g~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
+++-..|| .+..+.-+..+.. .+....+........+|+-....++.+ ..+.+++|-..+...........
T Consensus 261 ~ati~td~~~~S~~ViFfErNGLrHG---ef~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyhWYLK~e~~i 336 (1243)
T COG5290 261 YATIGTDGCSTSESVIFFERNGLRHG---EFDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYHWYLKVERQI 336 (1243)
T ss_pred eeeeccCCCCCcceEEEEccCCcccC---CccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccceEEEEEEeecC
Confidence 99876544 3555544332211 111111222334567776655545443 45679999877655433222211
Q ss_pred cCCCCCEEEEEecCC
Q psy6127 438 NNNASPLEATFTPDS 452 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g 452 (515)
. .+.-+.|+|..
T Consensus 337 p---~~s~vkwhpe~ 348 (1243)
T COG5290 337 P---GISYVKWHPEE 348 (1243)
T ss_pred C---Ccceeeecccc
Confidence 1 25667888854
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=82.12 E-value=62 Score=32.91 Aligned_cols=107 Identities=13% Similarity=0.113 Sum_probs=62.7
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee--eeEec-----CCCCceeEEEEecCC------CeEEEEEee--
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS--KNTIN-----SKKYGVDLIKFTHSK------TTAIHASTK-- 284 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~--~~~~~-----~~~~~v~~~~~~~~~------~~l~~~s~~-- 284 (515)
.-...+.|+|.|||++|++--..|.|++++..++.. +..+. ........++++|+- .++++..+.
T Consensus 28 GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~ 107 (454)
T TIGR03606 28 GLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKN 107 (454)
T ss_pred CCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccC
Confidence 345678999999998887765569999998655432 21111 135778999999874 244444311
Q ss_pred ------CCCeEEEEECCCC-------eee-EEec---CCCCCeEEEEEcCCCCEEEEEeCC
Q psy6127 285 ------VDATLRYLSLHDN-------KYV-RYFP---GHVRKVSSLNLSPVDDSFISGSYD 328 (515)
Q Consensus 285 ------~d~~v~vwd~~~~-------~~~-~~~~---~h~~~v~~l~~~~~~~~l~s~s~d 328 (515)
....|.-|.+... +.+ ..+. .|. -..|+|.|||.+.++.+..
T Consensus 108 ~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 108 GDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred CCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence 1234555554321 111 1111 232 3567899999866655543
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=81.80 E-value=8.4 Score=40.49 Aligned_cols=78 Identities=10% Similarity=0.223 Sum_probs=44.8
Q ss_pred CCCCEEEEEECCCcEEEEEeecCC--CCCcee-----------ee--------cCCCCCcCeEEEEEcC----CCCEEEE
Q psy6127 358 PEGLAFAIGVNSDSIKLYDVRSYD--KGPFAS-----------FK--------CPGERGCEWTGLKFSP----DGKLILV 412 (515)
Q Consensus 358 ~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~-----------~~--------~~~~~~~~i~~l~~sp----~~~~l~~ 412 (515)
++...++.+..||.+......... ...... +. ...........+++++ +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 466677777788877777665411 000000 00 0011223455667766 6789999
Q ss_pred EECCCcEEEEECCCCceeEEeec
Q psy6127 413 STNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 413 ~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
.+.|+++|+||+.+++++.....
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEET
T ss_pred EeCCCeEEEEECCCCeEEEEecc
Confidence 99999999999999999776543
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=81.29 E-value=28 Score=28.48 Aligned_cols=106 Identities=14% Similarity=0.157 Sum_probs=64.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCC--------CCeEEEEecCCCeeEEEECC-----CCCEEEEEECCCcEEEEEee
Q psy6127 312 SLNLSPVDDSFISGSYDKTVRVWDLRQ--------PNNVGMIQLSGNKPIAAYDP-----EGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~dg~i~iwd~~~--------~~~~~~~~~~~~~~~~~~s~-----~~~~l~~g~~dg~i~i~d~~ 378 (515)
.-+|....+.|++++.-|+|.|++... ...+..+.....+.+++--+ +...|+.|+ ...+..||+.
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~ 81 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVE 81 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcc
Confidence 345666667899999999999998763 34567777888888875433 345666664 5678999998
Q ss_pred cCCCCCceeeecCCCCCcCeEEEEEcC----CCCEEEEEECCCcEEEEECC
Q psy6127 379 SYDKGPFASFKCPGERGCEWTGLKFSP----DGKLILVSTNGSIIRLFDAF 425 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~l~~sp----~~~~l~~~s~dg~i~iwd~~ 425 (515)
....... ..-...++++.+-. ....+++| .+..|.-||..
T Consensus 82 ~N~d~Fy------ke~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~ 125 (136)
T PF14781_consen 82 NNSDLFY------KEVPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYE 125 (136)
T ss_pred cCchhhh------hhCccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCC
Confidence 7542211 12223455555532 22334433 34455555543
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=81.29 E-value=75 Score=36.02 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCE 251 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~ 251 (515)
......++|+|.-.++|.|..+|.|+++...
T Consensus 35 ~~~~~~~afD~~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 35 PSTPSALAFDPTQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred CCCCcceeeccccceEEEEEecccEEEeccc
Confidence 3456788999999999999999999999765
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=80.69 E-value=24 Score=39.78 Aligned_cols=145 Identities=16% Similarity=0.228 Sum_probs=81.1
Q ss_pred eCCCcEEEEEcCCCCeEEEEe-cCCCeeEEE--------ECCCCCEEEEEECCCcEEEEEeecCCCCCceeee----cCC
Q psy6127 326 SYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAA--------YDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK----CPG 392 (515)
Q Consensus 326 s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~--------~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~----~~~ 392 (515)
+.|+.+.+|+.+++.....+. ..+.+..+. |-|.=+++.+....-.|.++-+...+........ ...
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 468899999999866555552 222233222 2223334444444556666655433211111111 111
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEE--EEECCCC---c-e-------------eEEeeccc-cCCCCCEEEEEecCC
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIR--LFDAFNG---N-C-------------VQSLSGVL-NNNASPLEATFTPDS 452 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~--iwd~~~~---~-~-------------~~~~~~~~-~~~~~i~~~~~sp~g 452 (515)
..+..|+++....+|+.+++| .||.++ +|....+ + | +.++.... .+..+|..++.....
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G-~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR 254 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAG-RDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSR 254 (1311)
T ss_pred cCCceEEEEEeccCCcEEEee-cCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccc
Confidence 234567888877788776655 555332 1222211 1 1 11111112 345578999999888
Q ss_pred CEEEEEeCCCcEEEEECCC
Q psy6127 453 QFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~ 471 (515)
+.+.+-+..|+|.+||+..
T Consensus 255 ~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 255 NILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred ceeeeeccCceEEEEEccC
Confidence 9999999999999999976
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 515 | ||||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 8e-21 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 8e-21 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 9e-21 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 9e-21 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 1e-20 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 1e-20 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-20 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 2e-20 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 2e-20 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 2e-20 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 2e-20 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-20 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 2e-20 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 2e-20 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-20 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 2e-20 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 4e-20 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 6e-17 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 2e-12 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 3e-12 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 3e-12 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 7e-12 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 1e-11 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 2e-11 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 4e-11 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 1e-04 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 1e-10 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 1e-10 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 1e-10 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 1e-10 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 3e-05 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 2e-10 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 3e-05 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 2e-10 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 5e-04 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 2e-10 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 5e-04 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-09 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 2e-08 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 4e-08 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 2e-05 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 4e-08 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 5e-08 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 1e-07 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 1e-07 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 1e-07 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 1e-07 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 1e-07 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 2e-07 | ||
| 1gxr_A | 337 | Wd40 Region Of Human Groucho/tle1 Length = 337 | 2e-07 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 3e-07 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 3e-07 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 4e-07 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 1e-04 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 5e-04 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 6e-07 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 3e-06 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 3e-06 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 2e-05 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 5e-06 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 1e-05 | ||
| 3ei4_B | 436 | Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | 5e-05 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 8e-05 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 8e-05 | ||
| 4e5z_B | 436 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 9e-05 | ||
| 4e54_B | 435 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 9e-05 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 4e-04 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 4e-04 |
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|3EI4|B Chain B, Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|4E5Z|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 436 | Back alignment and structure |
|
| >pdb|4E54|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 435 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 515 | |||
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 100.0 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 100.0 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.98 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.98 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.98 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.97 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.97 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.97 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.97 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.96 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.96 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.95 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.95 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.95 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.95 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.95 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.94 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.94 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.94 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.94 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.94 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.93 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.93 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.93 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.93 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.92 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.92 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.92 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.92 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.92 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.91 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.91 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.91 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.89 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.88 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.88 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.88 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.88 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.87 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.87 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.86 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.86 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.85 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.85 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.85 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.85 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.84 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.83 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.82 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.81 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.8 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.79 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.78 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.78 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.77 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.76 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.75 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.75 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.74 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.74 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.74 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.74 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.73 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.73 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.72 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.71 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.71 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.7 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.69 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.69 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.69 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.69 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.68 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.67 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.65 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.65 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.65 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.64 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.64 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.64 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.63 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.61 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.59 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.58 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.57 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.56 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.56 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.55 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.53 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.53 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.52 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.49 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.48 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.48 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.47 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.47 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.46 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.46 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.44 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.41 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.4 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.38 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.37 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.34 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.33 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 99.31 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.3 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.3 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.25 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.25 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.25 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 99.25 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.21 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.21 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.18 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.14 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 99.13 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.13 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 99.13 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 99.1 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 99.08 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 99.03 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 99.03 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.99 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.98 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.98 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.98 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.96 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.95 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.95 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.93 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.89 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.89 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.87 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.87 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.84 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.84 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.83 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.82 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.78 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.78 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.76 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.75 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.71 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.69 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.68 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.66 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.66 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.63 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.6 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.54 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.54 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.49 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.47 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 98.46 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.45 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.45 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 98.43 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.4 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.36 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.35 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.32 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 98.31 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.31 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.31 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 98.3 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 98.29 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.27 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.23 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 98.22 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 98.19 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 98.18 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.18 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 98.14 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.13 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 98.1 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.09 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 98.06 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 98.03 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 98.0 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.98 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.95 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.95 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.93 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.91 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.9 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.82 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.81 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.75 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.62 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.58 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.54 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 97.48 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 97.48 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.4 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 97.39 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.34 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 97.31 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.3 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.28 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 97.27 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.24 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 97.17 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 97.16 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.12 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.1 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.1 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.09 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.03 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 96.93 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.9 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 96.89 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 96.89 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.88 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 96.71 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 96.5 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 96.48 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.46 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.45 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.37 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.23 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 96.14 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 95.62 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 95.25 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.08 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 95.07 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 94.87 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 93.61 | |
| 3q6k_A | 381 | 43.2 kDa salivary protein; beta propeller, binding | 92.6 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 90.75 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 88.16 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 86.43 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 86.03 | |
| 3q6k_A | 381 | 43.2 kDa salivary protein; beta propeller, binding | 84.43 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 81.55 | |
| 1wp5_A | 323 | Topoisomerase IV; broken beta-propeller, hairpin-i | 81.14 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 81.01 |
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-48 Score=407.35 Aligned_cols=308 Identities=20% Similarity=0.307 Sum_probs=257.8
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec-------CCCCc
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN-------SKKYG 265 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~-------~~~~~ 265 (515)
++++.|+.+++|+ .+++++..++.+|.+.|++++|+|||++||+|+.|++|++||..+++....+. +|...
T Consensus 164 ~s~s~D~~v~lwd--~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 164 ISGSDDNTVAIFE--GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp EEEETTSCEEEEE--TTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred EEEeCCCeEEEEE--CCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCC
Confidence 3677788899998 67788899999999999999999999999999999999999999999888874 79999
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE-------------------------------------------E
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR-------------------------------------------Y 302 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~-------------------------------------------~ 302 (515)
|.+++|+|++..+++++ .|++|++||+.+++.+. .
T Consensus 242 V~~v~~spdg~~l~s~s--~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~ 319 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASAS--ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQV 319 (611)
T ss_dssp EEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEe--CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceE
Confidence 99999999999887665 79999999998876543 3
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-------------------------------------
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI------------------------------------- 345 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~------------------------------------- 345 (515)
+.+|...|++++|+|++++|++++.|++|++||+.+++....+
T Consensus 320 ~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 320 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSS
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcc
Confidence 4579999999999999999999999999999999876543221
Q ss_pred ----------------------------------------------ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 346 ----------------------------------------------QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 346 ----------------------------------------------~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
.+...+.+++|+|+|+++++|+.|++|++||+..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~ 479 (611)
T 1nr0_A 400 VDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG 479 (611)
T ss_dssp SCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEET
T ss_pred ccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccC
Confidence 1112356789999999999999999999999986
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CceeEEeeccccCCCCCEEEEEecCCCEEEEE
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN-GNCVQSLSGVLNNNASPLEATFTPDSQFVASG 458 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg 458 (515)
... ..... ..|...|++++|+|+|++|++++.|++|++||+.+ ++..... ....|...|.+++|+|||++|++|
T Consensus 480 ~~~---~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~-~~~~H~~~V~~v~fspdg~~lasg 554 (611)
T 1nr0_A 480 ASV---SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN-SWTFHTAKVACVSWSPDNVRLATG 554 (611)
T ss_dssp TEE---EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCC-CCCCCSSCEEEEEECTTSSEEEEE
T ss_pred Cce---eeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeee-eeeecccceeEEEECCCCCEEEEE
Confidence 421 11222 45778899999999999999999999999999987 5544321 111245569999999999999999
Q ss_pred eCCCcEEEEECCCCe-EE-EEEcCCC-CCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 459 STDGQVHIWNAERGY-KV-CVLDGDH-PSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 459 s~dg~I~iwd~~~~~-~~-~~~~~~h-~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
+.|++|++||+.++. .. ..+.+ | .+.|++++|+|+++ |++++.| +++|+++
T Consensus 555 s~D~~v~lW~~~~~~~~~~~~~~~-h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 555 SLDNSVIVWNMNKPSDHPIIIKGA-HAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp ETTSCEEEEETTCTTSCCEEETTS-STTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred ECCCcEEEEECCCcccccchhhcc-CcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 999999999998865 33 45555 8 89999999999998 8888765 9999985
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=395.55 Aligned_cols=361 Identities=13% Similarity=0.143 Sum_probs=287.3
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEcccee----
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV---- 208 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~---- 208 (515)
+.||++. ...| .+||..+++.+.++.+|...+.+++|.|... +.++++.|+.+++||-..
T Consensus 31 ~~l~~~~-~~~v----------~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~-----~lasg~~d~~v~lWd~~~~~~~ 94 (611)
T 1nr0_A 31 DKIQYCN-GTSV----------YTVPVGSLTDTEIYTEHSHQTTVAKTSPSGY-----YCASGDVHGNVRIWDTTQTTHI 94 (611)
T ss_dssp SEEEEEE-TTEE----------EEEETTCSSCCEEECCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEESSSTTCC
T ss_pred CEEEeCC-CCEE----------EEecCCCcccCeEecCCCCceEEEEECCCCc-----EEEEEeCCCCEEEeECCCCcce
Confidence 4566654 3456 9999999999999999977777777766532 334777788888887310
Q ss_pred --ee--------------------------------------eEeeeeccccCCcEEEEEEcCCCC-EEEEEeCCCeEEE
Q psy6127 209 --RS--------------------------------------YRVAKVFRENTDKINSLDYSSDGS-LLISCSDDDQIII 247 (515)
Q Consensus 209 --~~--------------------------------------~~~~~~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~i 247 (515)
.. +++..++.+|.+.|++++|+|++. .|++|+.|++|++
T Consensus 95 ~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~l 174 (611)
T 1nr0_A 95 LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAI 174 (611)
T ss_dssp EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEE
T ss_pred eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEE
Confidence 00 011234678888999999999886 5999999999999
Q ss_pred EECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec-------CCCCCeEEEEEcCCCC
Q psy6127 248 YDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP-------GHVRKVSSLNLSPVDD 320 (515)
Q Consensus 248 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~ 320 (515)
||..+++....+.+|...|.+++|+|+++.+++++ .|++|++||+.+++.+..+. +|.+.|.+++|+|+++
T Consensus 175 wd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s--~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 175 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp EETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred EECCCCeEeeeeccccCceEEEEECCCCCEEEEEE--CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 99999999999999999999999999999777654 79999999999999888884 7999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCCeEEEE--------------------------------------------ecCCCeeEEEE
Q psy6127 321 SFISGSYDKTVRVWDLRQPNNVGMI--------------------------------------------QLSGNKPIAAY 356 (515)
Q Consensus 321 ~l~s~s~dg~i~iwd~~~~~~~~~~--------------------------------------------~~~~~~~~~~~ 356 (515)
+|++++.|++|++||+++++....+ .+...+.+++|
T Consensus 253 ~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~ 332 (611)
T 1nr0_A 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSS 332 (611)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEE
Confidence 9999999999999999988765543 23456889999
Q ss_pred CCCCCEEEEEECCCcEEEEEeecCCCCCc---------eeee--------------------------------------
Q psy6127 357 DPEGLAFAIGVNSDSIKLYDVRSYDKGPF---------ASFK-------------------------------------- 389 (515)
Q Consensus 357 s~~~~~l~~g~~dg~i~i~d~~~~~~~~~---------~~~~-------------------------------------- 389 (515)
+|+|++|++++.|++|++||+.++..... ..+.
T Consensus 333 spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~ 412 (611)
T 1nr0_A 333 SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSS 412 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSS
T ss_pred eCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCC
Confidence 99999999999999999999875421000 0000
Q ss_pred ------c-CC-----------------------CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccC
Q psy6127 390 ------C-PG-----------------------ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN 439 (515)
Q Consensus 390 ------~-~~-----------------------~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~ 439 (515)
. .. .+...+.+++|+|+|+++++|+.|++|++||+.++..... .. ..+
T Consensus 413 ~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~-~~-~~h 490 (611)
T 1nr0_A 413 QPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV-KT-IVH 490 (611)
T ss_dssp CEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE-EE-EEC
T ss_pred CCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeee-ec-cCC
Confidence 0 00 0234577899999999999999999999999987653211 11 234
Q ss_pred CCCCEEEEEecCCCEEEEEeCCCcEEEEECCC-CeEEEE-EcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 440 NASPLEATFTPDSQFVASGSTDGQVHIWNAER-GYKVCV-LDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 440 ~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~-~~~~~~-~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
...|.+++|+|+|++|++++.|++|++||+.+ +++... ....|.+.|++++|+||+++||+++.| +++|+++..
T Consensus 491 ~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 491 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCT
T ss_pred CCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCc
Confidence 55699999999999999999999999999987 665543 223399999999999999999999865 999999754
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=376.85 Aligned_cols=287 Identities=21% Similarity=0.355 Sum_probs=262.8
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
...+.+|.++|++++|+|++++|++|+.||+|++||+.+++....+.+|...|.+++|+|+++.+++++ .|++|++||
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs--~D~~i~iwd 178 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS--ADMTIKLWD 178 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE--TTSCCCEEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe--CCCeEEEEe
Confidence 456789999999999999999999999999999999999999999999999999999999998776654 799999999
Q ss_pred CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcE
Q psy6127 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSI 372 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i 372 (515)
+.+++++..+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+. +...+.++.++|++.++++|+.|++|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 99999999999999999999999999999999999999999999999988874 44568999999999999999999999
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC--------------------CCEEEEEECCCcEEEEECCCCceeEE
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD--------------------GKLILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~--------------------~~~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
++||+++.. .......|...|.+++|+|+ +.++++|+.|+.|++||+++++++..
T Consensus 259 ~vwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 259 RVWVVATKE-----CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp EEEETTTCC-----EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEECCCCc-----eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 999998754 33444578889999999996 67899999999999999999999998
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
+.+|.. .|.+++|+|+|++|++|+.||.|++||+.+++++..+.+ |...|++++|+|++.+|++|+.| +++|++
T Consensus 334 ~~~h~~---~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 334 LVGHDN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EECCSS---CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC-CSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EECCCC---cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 887654 499999999999999999999999999999999999988 99999999999999999999866 999986
Q ss_pred C
Q psy6127 511 T 511 (515)
Q Consensus 511 ~ 511 (515)
.
T Consensus 410 r 410 (410)
T 1vyh_C 410 R 410 (410)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=355.57 Aligned_cols=292 Identities=20% Similarity=0.320 Sum_probs=258.9
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
+..++|++|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|..+|.+++|+|+++.+++++ .|++|++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s--~d~~i~v 81 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS--DDFRIRV 81 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE--TTSEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC--CCCEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999887665 7999999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-EEE-ecCCCeeEEEECC-CCCEEEEEEC
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-GMI-QLSGNKPIAAYDP-EGLAFAIGVN 368 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~-~~~~~~~~~~~s~-~~~~l~~g~~ 368 (515)
||+.+++.+..+.+|.+.|.+++|+|++++|++|+.|++|++||++++... ..+ .+...+.+++|+| ++..+++|+.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999987544 444 4556799999999 6789999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC--CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 446 (515)
|++|++||++.... .......+...+..+.|+| +++++++++.|++|++||+++++++..+.+|... |.++
T Consensus 162 D~~v~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~---v~~~ 234 (304)
T 2ynn_A 162 DRTVKVWSLGQSTP----NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN---VSFA 234 (304)
T ss_dssp TSEEEEEETTCSSC----SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSC---EEEE
T ss_pred CCeEEEEECCCCCc----cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCC---EEEE
Confidence 99999999976442 2222345666788999987 7789999999999999999999999999876544 9999
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC--EEEEeeCC-EEEEcCCCC
Q psy6127 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH--MLASACSN-MAFWIPTLS 513 (515)
Q Consensus 447 ~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~--~las~~~d-v~iW~~~~~ 513 (515)
+|+|++++|++|+.||+|++||+.+++++..+.. |...+++++|+|++. ++|+++.+ ..+|++..+
T Consensus 235 ~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 235 VFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-GLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (304)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-SSSSEEEEEECTTCGGGCEEEEETTEEEEEECC--
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCceeeeccC-CCccEEEEEECCCCCceEEEEecCCceEEEEeccC
Confidence 9999999999999999999999999999999987 889999999999875 68888776 788887643
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=358.34 Aligned_cols=290 Identities=19% Similarity=0.307 Sum_probs=259.5
Q ss_pred eEeeeeccccCCcEEEEEEcCC----CCEEEEEeCCCeEEEEECCCCee--eeEecCCCCceeEEEEecCCCeEEEEEee
Q psy6127 211 YRVAKVFRENTDKINSLDYSSD----GSLLISCSDDDQIIIYDCEQGTS--KNTINSKKYGVDLIKFTHSKTTAIHASTK 284 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd----~~~lasgs~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~~ 284 (515)
+.+.+.+++|.+.|++++|+|+ +++|+||+.|++|++|++.+++. ...+.+|...|.+++|++++..++++ +
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~--s 99 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASS--S 99 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEE--E
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEE--e
Confidence 4445678899999999999984 67999999999999999987654 45689999999999999999876655 4
Q ss_pred CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEE
Q psy6127 285 VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAF 363 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l 363 (515)
.|++|++||+.+++.+..+..|...+.+++|+|++++|++|+.||.|++||+++++....+.. ...+.+++|+|++++|
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE
T ss_pred CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEE
Confidence 899999999999999999999999999999999999999999999999999999998877744 4558899999999999
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCC
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP 443 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 443 (515)
++|+.||.|++||+++++ .......|..+|.+++|+|++++|++++.|+.|++||+++++....+.+|.. .|
T Consensus 180 asg~~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~---~v 251 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGK-----LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS---WV 251 (321)
T ss_dssp EEEETTSCEEEEETTTTE-----EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS---CE
T ss_pred EEEcCCCeEEEEECCCCc-----EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC---ce
Confidence 999999999999998754 4444567888999999999999999999999999999999998888877554 49
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 444 LEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
.+++|+|++++|++++.|++|++||+.+++++..+.+ |.+.|++++|+|++.+|++++.| +++||.+
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999988 99999999999999999999865 9999976
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=359.02 Aligned_cols=289 Identities=20% Similarity=0.319 Sum_probs=259.8
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+...++++|.+.|++++|+||+++|++|+.||+|++||..+++....+..|...|.+++|+|+++.+++++ .|+.++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~d~~v~ 122 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG--LDNICS 122 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE--TTCEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe--CCCeEE
Confidence 345678899999999999999999999999999999999999999999999999999999999999777654 799999
Q ss_pred EEECCCC----eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEE
Q psy6127 291 YLSLHDN----KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 291 vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~ 365 (515)
+||+.++ +....+.+|.+.|.++.|++++. +++++.|++|++||+++++.+..+. +...+.+++|+|+++++++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 9999875 45667889999999999998765 8999999999999999999888884 5567999999999999999
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
|+.|+.|++||++++. .......|...|++++|+|++++|++++.|+.|++||+++++.+..+. +......+.+
T Consensus 202 g~~d~~v~~wd~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~~~~v~~ 275 (340)
T 1got_B 202 GACDASAKLWDVREGM-----CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275 (340)
T ss_dssp EETTSCEEEEETTTCS-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CTTCCSCEEE
T ss_pred EeCCCcEEEEECCCCe-----eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-cCCcccceEE
Confidence 9999999999998754 444456788899999999999999999999999999999998877665 3333445899
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 446 ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 446 ~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
++|+|+|++|++|+.||.|++||+.+++.+..+.+ |.++|++++|+|++.+|++++.| ++||+
T Consensus 276 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCCCEEEEECCCCeEEEEEcccCcEeeEeec-CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999988 99999999999999999999865 99996
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-45 Score=381.49 Aligned_cols=341 Identities=24% Similarity=0.377 Sum_probs=295.0
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
+.|++++.++.| ++||. +++.+.++.+|...+.++.+.+... ...+++.++.+++|+. ..+
T Consensus 234 ~~l~~~~~d~~i----------~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~-----~l~~~~~d~~i~~w~~---~~~ 294 (577)
T 2ymu_A 234 QTIASASDDKTV----------KLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQ-----TIASASDDKTVKLWNR---NGQ 294 (577)
T ss_dssp SCEEEEETTSCE----------EEECT-TSCEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEET---TSC
T ss_pred CEEEEEeCCCEE----------EEEeC-CCCEEEEEecCCCCEEEEEEcCCCC-----EEEEEeCCCEEEEEeC---CCc
Confidence 567788888888 99995 5778888899877777888776543 2236677888999983 356
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
+...+.+|...|.+++|+|++++|++++.|++|++||.. ++....+.+|...+.+++|+|++..+++++ .|+.+++|
T Consensus 295 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~dg~v~~~ 371 (577)
T 2ymu_A 295 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASAS--DDKTVKLW 371 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEE
T ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEe--CCCEEEEE
Confidence 778889999999999999999999999999999999976 556677889999999999999999877664 79999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCc
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
|. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+ .+...+.+++|+|+++++++++.|+.
T Consensus 372 ~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 372 NR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT 449 (577)
T ss_dssp ET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE
Confidence 95 57788889999999999999999999999999999999996 45555555 55667899999999999999999999
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
|++||... + .......|...|++++|+|++++|++++.|+.|++||. +++++..+.+|.. .|++++|+|+
T Consensus 450 v~~w~~~~-~-----~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~---~v~~l~~s~d 519 (577)
T 2ymu_A 450 VKLWNRNG-Q-----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS---SVRGVAFSPD 519 (577)
T ss_dssp EEEEETTS-C-----EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSS---CEEEEEECTT
T ss_pred EEEEECCC-C-----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCC---CEEEEEEcCC
Confidence 99999643 1 33334567889999999999999999999999999994 7888888887554 4999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
|++|++++.||.|++||. +++++..+.+ |.+.|++++|+||+++|++++.| +++||
T Consensus 520 g~~l~s~~~dg~v~lwd~-~~~~~~~~~~-h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 520 GQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEETTSEEEEECT-TSCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEECcCEEEEEeC-CCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999996 6889999988 99999999999999999999866 99997
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=343.43 Aligned_cols=295 Identities=25% Similarity=0.422 Sum_probs=263.9
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
.+....++.+|.+.|++++|+|++++|++|+.||.|++|+..+++....+.+|...|.+++|+|+++.+++++ .|+.|
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~d~~i 89 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS--DDKTL 89 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC--CCCEE
Confidence 4566788999999999999999999999999999999999999999999999999999999999998877665 79999
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEEC
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
++||+++++.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+. +...+.+++|+|+++++++++.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999888874 4567899999999999999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
||.|++||+++.+. .......+...+..++|+|+++++++++.|+.|++||+++++++..+.++......+.....
T Consensus 170 d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 170 DGLCRIWDTASGQC----LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp TSCEEEEETTTCCE----EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred CCcEEEEECCCCce----eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 99999999987541 22223456678999999999999999999999999999999999988877665444444444
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee----CCEEEEcCC
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC----SNMAFWIPT 511 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~----~dv~iW~~~ 511 (515)
.+++.++++|+.||.|++||+.+++.+..+.+ |.+.|.+++|+|++.++++++ +.+++|+.+
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-HTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eCCCcEEEEECCCCEEEEEECCCchhhhhhhc-cCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 57889999999999999999999999999998 999999999999999999985 349999875
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-44 Score=352.06 Aligned_cols=289 Identities=17% Similarity=0.289 Sum_probs=257.2
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
+...++++|.+.|++++|+|++++||||+.||+|++||..+++....+..|...|.+++|+|++..++++ +.|+.+++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg--~~d~~i~v 132 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACG--GLDNKCSV 132 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEE--STTSEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEe--eCCCCEEE
Confidence 4456789999999999999999999999999999999999999999999999999999999999877655 58999999
Q ss_pred EECCCC------eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECC--CCCE
Q psy6127 292 LSLHDN------KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDP--EGLA 362 (515)
Q Consensus 292 wd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~--~~~~ 362 (515)
|++... .....+.+|...|.+++|+|++..|++++.|++|++||+++++.+..+. +...+.+++++| ++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 998643 3455677899999999999999999999999999999999999988885 455688899987 5789
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCC
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
|++|+.||.|++||+++++ .......|...|++++|+|++++|++++.|++|++||+++++.+..+..+. ....
T Consensus 213 l~sgs~Dg~v~~wd~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~-~~~~ 286 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQ-----CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES-IIFG 286 (354)
T ss_dssp EEEEETTSCEEEEETTTCC-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-CCSC
T ss_pred EEEEeCCCeEEEEECCCCc-----EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC-cccc
Confidence 9999999999999998865 444456788899999999999999999999999999999988776665332 3345
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
+.+++|+|+|++|++|+.|+.|++||+.+++.+..+.+ |.+.|++++|+|++++|++++.| +++|+
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC-CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 78999999999999999999999999999999999988 99999999999999999999866 99995
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=360.86 Aligned_cols=300 Identities=17% Similarity=0.309 Sum_probs=260.3
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
.....+.+++++|.+.|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|+++.++++ +.|+
T Consensus 53 ~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~--~~d~ 130 (380)
T 3iz6_a 53 PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACG--GLDS 130 (380)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEEC--CSSS
T ss_pred cceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEe--eCCC
Confidence 34566778899999999999999999999999999999999999999999999999999999999999977654 5899
Q ss_pred eEEEEECCCCe-------eeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCeEEEEe------cCCCeeE
Q psy6127 288 TLRYLSLHDNK-------YVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNNVGMIQ------LSGNKPI 353 (515)
Q Consensus 288 ~v~vwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~~~~~ 353 (515)
.+++||+.+.. ....+.+|.+.|.++.|.|++ ..|++|+.|++|++||+++++.+..+. +...+.+
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 99999987532 345678999999999999975 479999999999999999999888762 3455888
Q ss_pred EEECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE
Q psy6127 354 AAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 354 ~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
++++| +++++++|+.|++|++||++.... .......|...|.+++|+|++++|++++.|++|++||+++++++..
T Consensus 211 ~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 211 LSINSLNANMFISGSCDTTVRLWDLRITSR----AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp EEECSSSCCEEEEEETTSCEEEEETTTTCC----CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred EEeecCCCCEEEEEECCCeEEEEECCCCCc----ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 99977 889999999999999999985321 3333457888999999999999999999999999999999998887
Q ss_pred eeccccC----CCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc---CCCCCCeEEEEECCCCCEEEEeeCC-
Q psy6127 433 LSGVLNN----NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD---GDHPSAVQSLQFNPKYHMLASACSN- 504 (515)
Q Consensus 433 ~~~~~~~----~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~---~~h~~~V~~l~~sp~~~~las~~~d- 504 (515)
+..+... ...+.+++|+|+|++|++|+.||.|++||+.+++.+..+. ..|.+.|++++|+|++.+|++|+.|
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 7654322 2347899999999999999999999999999999888772 2399999999999999999999865
Q ss_pred -EEEEcCCCC
Q psy6127 505 -MAFWIPTLS 513 (515)
Q Consensus 505 -v~iW~~~~~ 513 (515)
+++|++...
T Consensus 367 ~i~iW~~~~~ 376 (380)
T 3iz6_a 367 NLKIWAFSGH 376 (380)
T ss_dssp CEEEEECCSS
T ss_pred CEEEEecCCC
Confidence 999998754
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=341.11 Aligned_cols=292 Identities=20% Similarity=0.279 Sum_probs=252.6
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-----CeeeeEecCCCCceeEEEEecCCCeEEEEE
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQ-----GTSKNTINSKKYGVDLIKFTHSKTTAIHAS 282 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 282 (515)
+...+..++++|.+.|++++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++..+++++
T Consensus 5 ~~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 5 EVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 3466778899999999999999965 8999999999999999864 345678899999999999999999877665
Q ss_pred eeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCC---
Q psy6127 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE--- 359 (515)
Q Consensus 283 ~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~--- 359 (515)
.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||++.........+...+..+.++|.
T Consensus 85 --~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 85 --WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp --TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC---
T ss_pred --CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCC
Confidence 799999999999999999999999999999999999999999999999999975443333356667899999985
Q ss_pred ---CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc
Q psy6127 360 ---GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV 436 (515)
Q Consensus 360 ---~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~ 436 (515)
+..+++++.|+.|++||++..+ .......|...|.+++|+|++++|++++.|+.|++||+.+++++..+..+
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~-----~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 237 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQ-----IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ 237 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTE-----EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred CCCccEEEEEeCCCEEEEEECCcch-----hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 4589999999999999998743 33344578889999999999999999999999999999999998888753
Q ss_pred ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC-------CCCCCeEEEEECCCCCEEEEeeCC--EEE
Q psy6127 437 LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG-------DHPSAVQSLQFNPKYHMLASACSN--MAF 507 (515)
Q Consensus 437 ~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------~h~~~V~~l~~sp~~~~las~~~d--v~i 507 (515)
..+.+++|+|++.++++++.+ .+++|++..+..+..+.. .|...+.+++|+|||++|++++.| +++
T Consensus 238 ----~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~v 312 (319)
T 3frx_A 238 ----DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRV 312 (319)
T ss_dssp ----SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ----CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEE
Confidence 349999999999999988755 499999998888777653 145679999999999999999865 999
Q ss_pred EcCCC
Q psy6127 508 WIPTL 512 (515)
Q Consensus 508 W~~~~ 512 (515)
|++..
T Consensus 313 Wd~~t 317 (319)
T 3frx_A 313 WQVMT 317 (319)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 99864
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=341.65 Aligned_cols=298 Identities=13% Similarity=0.164 Sum_probs=257.9
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
+..+..+++|...|.++++.+....... +.++++.|+.+++|+.......+...+.+|...|.+++|+|++.++++|+.
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~-~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSE-TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 100 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------C-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCC-EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC
Confidence 3344566788777888888754322111 334888999999998332334556679999999999999999999999999
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
|++|++||+.+++.+..+..+...+.+++|+|+++.++++ +.|+.|++||+++++....+..|...|.+++|+|++++
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g--~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATG--THVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEE--CTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEE--cCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 9999999999999999999999999999999999987765 47999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEE
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTG 400 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~ 400 (515)
|++|+.||.|++||+++++.+..+. +...+.+++|+|++++|++|+.|++|++||++... .......|...|.+
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-----LAGTLSGHASWVLN 253 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC-----EEEEECCCSSCEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-----eeEEEcCCCCceEE
Confidence 9999999999999999999988885 45678999999999999999999999999998754 34445678889999
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 401 LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 401 l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
++|+|++++|++++.|++|++||+.+++++..+..|.. .|.+++|+|++++|++++.||.|++||..
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~---~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD---QVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC---cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999999887554 49999999999999999999999999974
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=366.99 Aligned_cols=343 Identities=23% Similarity=0.376 Sum_probs=295.6
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
+.+++++.++.| ++||. +++.+.++.+|...+.++.+.+... ...+++.++.+++|+. ..+
T Consensus 193 ~~l~~~~~d~~v----------~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~-----~l~~~~~d~~i~~w~~---~~~ 253 (577)
T 2ymu_A 193 QTIASASDDKTV----------KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQ-----TIASASDDKTVKLWNR---NGQ 253 (577)
T ss_dssp SCEEEEETTSEE----------EEECT-TSCEEEEEECCSSCEEEEEECTTSS-----CEEEEETTSCEEEECT---TSC
T ss_pred CEEEEEcCCCEE----------EEEeC-CCcEEEEEecCCCCEEEEEECCCCC-----EEEEEeCCCEEEEEeC---CCC
Confidence 578888888888 99995 6788888889877777777776543 2236677888999984 356
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
++..+.+|...|.+++|+|++++|++++.|+.|++||.. ++....+.+|...|.+++|+|++..+++++ .|+.|++|
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~--~d~~i~~w 330 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASAS--DDKTVKLW 330 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEE
T ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEe--CCCeEEEE
Confidence 778899999999999999999999999999999999964 778888999999999999999999887665 79999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCc
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
|... +.+..+.+|...|.+++|+|+++.+++++.|+.|++||. +++.+..+ .+...+.+++|+|++++|++++.|+.
T Consensus 331 ~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 331 NRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 408 (577)
T ss_dssp ETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred eCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE
Confidence 9764 456778899999999999999999999999999999995 45666655 45667999999999999999999999
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
|++||... + .......|...|++++|+|+++++++++.|+.|++||. +++.+..+.+|.. .+.+++|+|+
T Consensus 409 v~~~~~~~-~-----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~---~v~~~~~spd 478 (577)
T 2ymu_A 409 VKLWNRNG-Q-----LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSS---SVRGVAFSPD 478 (577)
T ss_dssp EEEECTTC-C-----EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSS---CEEEEEECTT
T ss_pred EEEEeCCC-C-----EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCC---CEEEEEEcCC
Confidence 99999542 1 33334567889999999999999999999999999995 6677777776544 4999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
+++|++++.|+.|++||. +++++..+.+ |.+.|++++|+|++++||+++.| +++|+.+
T Consensus 479 ~~~las~~~d~~i~iw~~-~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp SCEEEEEETTSEEEEEET-TSCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCEEEEEeCCCEEEEEcC-CCCEEEEEeC-CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 999999999999999995 6889999988 99999999999999999999866 9999964
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=349.65 Aligned_cols=304 Identities=16% Similarity=0.153 Sum_probs=232.9
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeee----eEecCC
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD------DDQIIIYDCEQGTSK----NTINSK 262 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~------dg~i~iwd~~~~~~~----~~~~~~ 262 (515)
+.++++.....|+ ++. ....+|...|++++|||||++||+||. |+.|++|+..++... .....|
T Consensus 20 ~~~~g~~~~~~w~--~p~----~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~ 93 (357)
T 4g56_B 20 FQSNGSSKGSAWG--RPV----TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT 93 (357)
T ss_dssp --------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC
T ss_pred EecCCCccccccC--CCC----CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC
Confidence 3455556677787 433 234579999999999999999999997 788999998876543 334568
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE----EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR----YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~----~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~ 338 (515)
...|.+++|+|++. ++++ +.|++|++||+.+++... ...+|.+.|++++|+|++++|++|+.|++|++||+++
T Consensus 94 ~~~V~~~~~s~d~~-~l~~--s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 94 EAGVTDVAWVSEKG-ILVA--SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp SSCEEEEEEETTTE-EEEE--ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEEcCCCC-EEEE--ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 88999999999975 4443 369999999999887543 3458999999999999999999999999999999999
Q ss_pred CCeEEEEe-cCCCeeEEEECCCCC-EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEEC
Q psy6127 339 PNNVGMIQ-LSGNKPIAAYDPEGL-AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTN 415 (515)
Q Consensus 339 ~~~~~~~~-~~~~~~~~~~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~ 415 (515)
++.+..+. +...+.+++|+|++. .+++++.||.|++||+++++... ......+...+.+++|+|+ +.++++|+.
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~---~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT---RIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC---BCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee---eeeeccccccccchhhhhcccceEEEeec
Confidence 99988885 456799999999875 78999999999999998765221 1122356678999999997 468899999
Q ss_pred CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC-
Q psy6127 416 GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP- 493 (515)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp- 493 (515)
|+.|++||+++++++..+.++.. .|.+++|+|++ ++|++|+.||+|+|||+++++++..+ + |.+.|++++|+|
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~-H~~~V~~vafsP~ 322 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQ---NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-S-HRDFVTGVAWSPL 322 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSS---CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-C-CSSCEEEEEECSS
T ss_pred ccceeEEECCCCcEeEEEeccce---eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-C-CCCCEEEEEEeCC
Confidence 99999999999999988887554 49999999987 58999999999999999999888765 4 999999999999
Q ss_pred CCCEEEEeeCC--EEEEcCCCC
Q psy6127 494 KYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 494 ~~~~las~~~d--v~iW~~~~~ 513 (515)
++.+|++++.| +++|+++..
T Consensus 323 d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 323 DHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp STTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEcCCCeEEEEECCCC
Confidence 89999999855 999998754
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=345.59 Aligned_cols=285 Identities=21% Similarity=0.384 Sum_probs=247.1
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCC------------------ceeEEEEecCCCeEEE
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY------------------GVDLIKFTHSKTTAIH 280 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 280 (515)
+|.+.|.+++|+|||++||+|+ ++++++|++.+++.+..+..+.. .|.+++|+|+++.+++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999987 68999999999998887765532 3899999999998776
Q ss_pred EEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECC-C
Q psy6127 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP-E 359 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~-~ 359 (515)
++ .|+.|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|++|++||++++++...+.....+.+++++| +
T Consensus 141 ~~--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GA--EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 218 (393)
T ss_dssp EE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT
T ss_pred Ec--CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC
Confidence 64 79999999999999999999999999999999999999999999999999999999988888888899999999 8
Q ss_pred CCEEEEEECCCcEEEEEeecCCCCCceee----ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC--------
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASF----KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-------- 427 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~~~~~~~----~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~-------- 427 (515)
++++++|+.|+.|++||++++.. ...+ .....|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCEEEEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 99999999999999999987541 1111 112467889999999999999999999999999999764
Q ss_pred ----ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC------CCCE
Q psy6127 428 ----NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP------KYHM 497 (515)
Q Consensus 428 ----~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp------~~~~ 497 (515)
.+...+.+| ...|.+++|+|++++|++|+.||.|++||..+++++..+.+ |.+.|.+++|+| ++.+
T Consensus 297 ~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~-h~~~v~~v~~~~~~~~~p~~~~ 372 (393)
T 1erj_A 297 PNSGTCEVTYIGH---KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNV 372 (393)
T ss_dssp ----CEEEEEECC---SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEE
T ss_pred CCCCcceEEEecc---cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-CCCCEEEEEecCCcCcCCCCCE
Confidence 334445544 44599999999999999999999999999999999999988 999999999986 6889
Q ss_pred EEEeeCC--EEEEcCCC
Q psy6127 498 LASACSN--MAFWIPTL 512 (515)
Q Consensus 498 las~~~d--v~iW~~~~ 512 (515)
|++|+.| +++|+++.
T Consensus 373 l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 373 FATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEETTSEEEEEEEEE
T ss_pred EEEECCCCcEEECcccc
Confidence 9999866 99999753
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=355.14 Aligned_cols=290 Identities=21% Similarity=0.313 Sum_probs=260.3
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
...++.+|...|.++.|.+... +.++++.|+.+++|| ..++++.+++.+|.+.|++++|+|++++|++|+.|+
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~-----~l~s~s~Dg~i~vwd--~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~ 172 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFS-----VMVSASEDATIKVWD--YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM 172 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSS-----EEEEEESSSCEEEEE--TTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEeecccCCcEEEEEEcCCCC-----EEEEEeCCCeEEEEE--CCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC
Confidence 3456778887888888887643 445788899999999 778888999999999999999999999999999999
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI 323 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~ 323 (515)
+|++||+.+++++..+.+|...|.+++|+|+++.+++++ .|++|++||++++.++..+.+|...|.+++++|++.+|+
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s--~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS--RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA 250 (410)
T ss_dssp CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEE
Confidence 999999999999999999999999999999999877654 799999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCC--------------------CCEEEEEECCCcEEEEEeecCCC
Q psy6127 324 SGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPE--------------------GLAFAIGVNSDSIKLYDVRSYDK 382 (515)
Q Consensus 324 s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~--------------------~~~l~~g~~dg~i~i~d~~~~~~ 382 (515)
+|+.|++|++||++++++...+ .+...+.+++|+|+ +.++++|+.|++|++||++++.
T Consensus 251 s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~- 329 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM- 329 (410)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE-
T ss_pred EEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc-
Confidence 9999999999999999988887 45566899999996 6789999999999999998754
Q ss_pred CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 383 GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
.......|...|++++|+|++++|++++.|+.|++||+.+++++..+.+|.. .|++++|+|++.+|++|+.||
T Consensus 330 ----~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~sgs~D~ 402 (410)
T 1vyh_C 330 ----CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH---FVTSLDFHKTAPYVVTGSVDQ 402 (410)
T ss_dssp ----EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS---CEEEEEECSSSSCEEEEETTS
T ss_pred ----eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC---cEEEEEEcCCCCEEEEEeCCC
Confidence 4444457888999999999999999999999999999999999998887654 499999999999999999999
Q ss_pred cEEEEECC
Q psy6127 463 QVHIWNAE 470 (515)
Q Consensus 463 ~I~iwd~~ 470 (515)
+|++|+++
T Consensus 403 ~i~vW~~r 410 (410)
T 1vyh_C 403 TVKVWECR 410 (410)
T ss_dssp EEEEEC--
T ss_pred cEEEEeCC
Confidence 99999863
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=339.29 Aligned_cols=297 Identities=21% Similarity=0.338 Sum_probs=245.3
Q ss_pred eeEeeeeccccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeee---EecCCCCceeEEEEecCCCeEEEEEeeC
Q psy6127 210 SYRVAKVFRENTD-KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN---TINSKKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 210 ~~~~~~~~~~h~~-~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
..+++.++++|.+ .|.+++|+|+|++||+|+.|++|+|||+.+++... ...+|...|.+++|+|+++.+++++ .
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s--~ 81 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS--F 81 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE--T
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE--C
Confidence 3567888999988 99999999999999999999999999998876432 2368999999999999999877665 7
Q ss_pred CCeEEEEECCCC--eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe---EEEE-ecCCCeeEEEECCC
Q psy6127 286 DATLRYLSLHDN--KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN---VGMI-QLSGNKPIAAYDPE 359 (515)
Q Consensus 286 d~~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~-~~~~~~~~~~~s~~ 359 (515)
|+++++||+.++ +.+..+.+|...|.+++|+|++++|++|+.|++|++||++++.. +..+ .+...+.+++|+|+
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 999999998876 46788999999999999999999999999999999999987754 3333 34566899999999
Q ss_pred CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC------------
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG------------ 427 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~------------ 427 (515)
+++|++++.|++|++||.+.... ........|...|.+++|+|++++|++++.|++|++||....
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~---~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDW---VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEE---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---
T ss_pred CCEEEEEeCCCcEEEEEecCCCE---EEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccC
Confidence 99999999999999999986431 122334678889999999999999999999999999996332
Q ss_pred ---ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe--------EEEEEcCCCCCCeEEEEECCCC-
Q psy6127 428 ---NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY--------KVCVLDGDHPSAVQSLQFNPKY- 495 (515)
Q Consensus 428 ---~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~--------~~~~~~~~h~~~V~~l~~sp~~- 495 (515)
+++..+.+ .+...|.+++|+|++..|++++.|+.|++|+...+. ........|.+.|++++|+|++
T Consensus 239 ~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 316 (345)
T 3fm0_A 239 PSWKCICTLSG--FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP 316 (345)
T ss_dssp CEEEEEEEECS--SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST
T ss_pred CccceeEEecC--CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc
Confidence 22233332 144569999999999999999999999999986542 2222323499999999999987
Q ss_pred CEEEEeeCC--EEEEcCCCC
Q psy6127 496 HMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 496 ~~las~~~d--v~iW~~~~~ 513 (515)
.+||+++.| +++|++...
T Consensus 317 ~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 317 GLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp TEEEEEETTSCEEEEEECC-
T ss_pred eEEEEcCCCCcEEEEEecCC
Confidence 499999865 999998754
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=336.36 Aligned_cols=291 Identities=20% Similarity=0.265 Sum_probs=241.3
Q ss_pred eeEeeeeccccCCcEEEEEE-----cC-CCCEEEEEeCCCeEEEEECCCC-------eeeeEecCCCCceeEEEEecCCC
Q psy6127 210 SYRVAKVFRENTDKINSLDY-----SS-DGSLLISCSDDDQIIIYDCEQG-------TSKNTINSKKYGVDLIKFTHSKT 276 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~-----sp-d~~~lasgs~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 276 (515)
..++..++++|.+.|++++| +| ++++|++|+.|++|++||+.++ .+...+.+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 45667889999999999999 77 9999999999999999998753 45677899999999999999998
Q ss_pred eEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE---ecCCCeeE
Q psy6127 277 TAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI---QLSGNKPI 353 (515)
Q Consensus 277 ~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~ 353 (515)
.++++ +.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+......... .+...+.+
T Consensus 90 ~l~s~--s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 90 FAISS--SWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp EEEEE--ETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred EEEEE--cCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 77755 48999999999999999999999999999999999999999999999999999843322222 34456889
Q ss_pred EEECCCC----------CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 354 AAYDPEG----------LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 354 ~~~s~~~----------~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
++|+|++ .++++++.|+.|++||... ........|...|.+++|+|+|++|++|+.|+.|++||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF------QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT------EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC------ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 9999987 7999999999999999432 12333456788999999999999999999999999999
Q ss_pred CCC-CceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEE--EEcC----------CCCCCeEEEE
Q psy6127 424 AFN-GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVC--VLDG----------DHPSAVQSLQ 490 (515)
Q Consensus 424 ~~~-~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~--~~~~----------~h~~~V~~l~ 490 (515)
+.. ......+. ....+.+++|+|++.+++++ .|+.|++||+.+++... .+.. .|...|++++
T Consensus 242 ~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 316 (343)
T 2xzm_R 242 ILNLTYPQREFD----AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLA 316 (343)
T ss_dssp SSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEE
T ss_pred CCCCcccceeec----CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEE
Confidence 954 33333332 12348999999999988765 57789999998776443 3331 3788999999
Q ss_pred ECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 491 FNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 491 ~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
|+|++++|++|+.| +++|+++.+
T Consensus 317 ~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 317 WNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp ECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred ECCCCCeEEEecCCceEEEEEEEcc
Confidence 99999999999865 999998643
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=337.35 Aligned_cols=284 Identities=19% Similarity=0.230 Sum_probs=228.7
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ-----------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
..|...|.+++|+|||++|++++ |+++++||... .........+...|.+++|+|++ .++++ +.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~--s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVA--SDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEE--ETT
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEE--ECC
Confidence 46788899999999999999888 67788886321 11111223355789999999986 45444 479
Q ss_pred CeEEEEECCCCeeeEE----ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCC-
Q psy6127 287 ATLRYLSLHDNKYVRY----FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEG- 360 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~----~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~- 360 (515)
|+|++||+++++.... +.+|.+.|++++|+|++++|++|+.|++|++||+++++.+..+. +...+.+++|+|++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence 9999999998876543 45899999999999999999999999999999999999998885 56779999999988
Q ss_pred CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCceeEEeeccccC
Q psy6127 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN 439 (515)
Q Consensus 361 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~ 439 (515)
.++++++.|++|++||+++++. ...+ ....+...+.+++|+|+ ++++++|+.||.|++||+++++++..+.+|..
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~--~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~- 258 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKP--ASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ- 258 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSC--EEEC-C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS-
T ss_pred Cceeeeccccccccccccccce--eeee-ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC-
Confidence 4789999999999999987652 1111 12345567889999995 56889999999999999999999999887654
Q ss_pred CCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEeeCC--EEEEcCCCC
Q psy6127 440 NASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASACSN--MAFWIPTLS 513 (515)
Q Consensus 440 ~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~~d--v~iW~~~~~ 513 (515)
.|++++|+|++ ++|++|+.|++|+|||+.++++.. +.+ |.+.|++++|+|++. ++++++.| +++|+++..
T Consensus 259 --~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~-H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 259 --CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQA-HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp --CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECC-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred --CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcC-CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 49999999998 589999999999999999988654 566 999999999999886 56777754 999998754
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=334.01 Aligned_cols=291 Identities=20% Similarity=0.297 Sum_probs=253.0
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
.+...++.+|...|.++.|.+... +.++++.|+.+++|| ....+....+..|...|.+++|+|++++|++|+.
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~-----~l~s~s~Dg~v~iWd--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 117 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSR-----LLLSASQDGKLIIWD--SYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 117 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSS-----EEEEEETTTEEEEEE--TTTCCEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred chhheeecCCCCceEEEEECCCCC-----EEEEEeCCCcEEEEE--CCCCCcceEeecCCccEEEEEECCCCCEEEEEeC
Confidence 345567889988788888876543 344788899999999 7778888999999999999999999999999999
Q ss_pred CCeEEEEECCCC----eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC
Q psy6127 242 DDQIIIYDCEQG----TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 242 dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 317 (515)
|+.|++|++.++ .....+.+|...|.++.|++++. +++ ++.|++|++||+++++.+..+.+|.+.|.+++|+|
T Consensus 118 d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s--~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT--SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEE--EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEE--EECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 999999999875 35567889999999999999874 443 35799999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
+++++++|+.|++|++||++++.+...+. +...+.+++|+|++++|++|+.||+|++||++.... ...+ ....+..
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~-~~~~~~~ 271 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE--LMTY-SHDNIIC 271 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEE-CCTTCCS
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE--EEEE-ccCCccc
Confidence 99999999999999999999999988884 556799999999999999999999999999987431 1111 1223445
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
.|++++|+|+|+++++|+.|+.|++||+.+++.+..+.+|.. .|.+++|+|+|.+|++|+.||.|++||
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~---~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN---RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC---cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 799999999999999999999999999999999888887554 499999999999999999999999997
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=329.70 Aligned_cols=293 Identities=15% Similarity=0.236 Sum_probs=232.5
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eeeeEe-cC-CCCceeEEEEecCCCeEEEEEeeC
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG--TSKNTI-NS-KKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
..++++++++|.++|++++|+|+ +||+|+.|++|++||+.++ +....+ .. |...|.+++|+|+++.+++++ .
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s--~ 78 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS--F 78 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE--T
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe--C
Confidence 45677889999999999999998 9999999999999999875 445556 44 999999999999998776654 7
Q ss_pred CCeEEEEECCC-------CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC----CeEEEE-ecCCCeeE
Q psy6127 286 DATLRYLSLHD-------NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP----NNVGMI-QLSGNKPI 353 (515)
Q Consensus 286 d~~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~----~~~~~~-~~~~~~~~ 353 (515)
|++|++||+.. .+.+..+.+|...|.+++|+|++++|++|+.|++|++||++.. +++..+ .+...+.+
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 99999999853 3567788999999999999999999999999999999999532 344555 45567999
Q ss_pred EEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC--CCEEEEEECCCcEEEEECCCC----
Q psy6127 354 AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD--GKLILVSTNGSIIRLFDAFNG---- 427 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~--~~~l~~~s~dg~i~iwd~~~~---- 427 (515)
++|+|++.+|++++.|++|++||.+.... ........|...|.+++|+|+ +.++++++.|++|++||+..+
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYDDDW---ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD 235 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEE---EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCCe---eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc
Confidence 99999999999999999999999876421 134445678889999999998 778999999999999998654
Q ss_pred ----ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe--EEEEEcCCCCC-CeEEEEECC--CCCEE
Q psy6127 428 ----NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY--KVCVLDGDHPS-AVQSLQFNP--KYHML 498 (515)
Q Consensus 428 ----~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~-~V~~l~~sp--~~~~l 498 (515)
.+...+.. .+...|.+++|++++ +|++++.||.|++||..+++ ........|.. .|++++|+| ++.+|
T Consensus 236 ~~~~~~~~~~~~--~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 236 QQEWVCEAILPD--VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL 312 (330)
T ss_dssp CEEEEEEEECCS--CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCE
T ss_pred cceeEEeeeccc--ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEE
Confidence 22333322 244569999999765 78999999999999998874 34444333876 899999999 78999
Q ss_pred EEeeCC--EEEEcCCC
Q psy6127 499 ASACSN--MAFWIPTL 512 (515)
Q Consensus 499 as~~~d--v~iW~~~~ 512 (515)
|+++.| +++|+++.
T Consensus 313 as~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 313 ATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEETTSEEEEEEC--
T ss_pred EEecCCCcEEEEEecc
Confidence 999865 99999864
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=337.87 Aligned_cols=337 Identities=12% Similarity=0.152 Sum_probs=273.8
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEcccee----eeeE------eeeeccc-----
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV----RSYR------VAKVFRE----- 219 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~----~~~~------~~~~~~~----- 219 (515)
.+|+............|...+.++.+.+..... ++ +++.++.+++|+ + ..++ ....+..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~---l~-~~~~dg~i~iw~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (425)
T 1r5m_A 28 SSDDLDGFVKILKEIVKLDNIVSSTWNPLDESI---LA-YGEKNSVARLAR--IVETDQEGKKYWKLTIIAELRHPFALS 101 (425)
T ss_dssp ------CCCEECEEEEECSCCSEEEECSSCTTE---EE-EEETBTEEEEEE--EEEC------CEEEEEEEEEECCCCCC
T ss_pred ccccchhhhhheeeeeccCceEEEEECCCCCcE---EE-EecCCceEEEEE--EecccCCcccccccccccccccccccc
Confidence 567776554443333333456677776654311 33 667789999999 6 5555 3333333
Q ss_pred -----cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 220 -----NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 220 -----h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
|.+.|++++|+|++++|++|+.||.|++|| .+++....+..|...|.+++|+|+++.+++++ .|+.|++||+
T Consensus 102 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~ 178 (425)
T 1r5m_A 102 ASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMD--VENVTILWNV 178 (425)
T ss_dssp ------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEE--TTCCEEEEET
T ss_pred ccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEe--cCCeEEEEEC
Confidence 788999999999999999999999999999 67888899999999999999999999887665 7999999999
Q ss_pred CCCeeeEEecCCCCC---------------eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECC
Q psy6127 295 HDNKYVRYFPGHVRK---------------VSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDP 358 (515)
Q Consensus 295 ~~~~~~~~~~~h~~~---------------v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~ 358 (515)
.+++.+..+..|... +.+++|+|+ ..+++++.||.|++||+++++....+ .+...+.+++|+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 999999999888777 999999997 46889999999999999999888777 4556789999999
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN 438 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 438 (515)
+++++++++.|+.|++||++..+ .......+...+.+++|+|++ ++++++.|+.|++||+++++.+..+..+.
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~- 330 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGN-----SQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDG- 330 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBS-----CSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTT-
T ss_pred CCCEEEEEcCCCEEEEEECCCCc-----cceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCC-
Confidence 99999999999999999998754 223334677899999999999 99999999999999999999888887644
Q ss_pred CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe--------------------EEEEEcCCCCC--CeEEEEECCCCC
Q psy6127 439 NNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY--------------------KVCVLDGDHPS--AVQSLQFNPKYH 496 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~--------------------~~~~~~~~h~~--~V~~l~~sp~~~ 496 (515)
..+.+++|+|++++|++++.||.|++||+.+++ ++..+.. |.. .|++++|+|+++
T Consensus 331 --~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~ 407 (425)
T 1r5m_A 331 --VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS-SQDNDYIFDLSWNCAGN 407 (425)
T ss_dssp --CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC-TTCCCCEEEEEECTTSS
T ss_pred --ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC-cccCCceEEEEccCCCc
Confidence 349999999999999999999999999999888 8888988 765 999999999999
Q ss_pred EEEEeeCC--EEEEcCC
Q psy6127 497 MLASACSN--MAFWIPT 511 (515)
Q Consensus 497 ~las~~~d--v~iW~~~ 511 (515)
+|++++.+ +++|+++
T Consensus 408 ~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 408 KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEEESSSCCEEEECC
T ss_pred eEEEEecCceEEEEeec
Confidence 99998855 9999986
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=323.47 Aligned_cols=290 Identities=15% Similarity=0.201 Sum_probs=249.4
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
...++.+|...|.++.|.|... +.++++.|+.+++|| ..+.+++..+.+|..+|.+++|+|++++|++|+.|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~-----~l~s~~~dg~v~lWd--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEP-----WVLTTLYSGRVELWN--YETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSS-----EEEEEETTSEEEEEE--TTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred eEEeecCCCCceEEEEECCCCC-----EEEEEcCCCcEEEEE--CCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence 3456778877788888877653 334778899999999 778888999999999999999999999999999999
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eeeEEecCCCCCeEEEEEcC-CCCE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSP-VDDS 321 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~l~~~~-~~~~ 321 (515)
+|++||+.+++.+..+.+|...|.+++|+|+++.+++++ .|++|++||++++ .....+.+|...|.+++|+| ++..
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC--CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 999999999999999999999999999999999777554 8999999999887 55678899999999999999 5789
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEEe--cCCCeeEEEECC--CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKPIAAYDP--EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~s~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
|++|+.|++|++||++++.....+. +...+..+.++| ++.++++|+.|++|++||+++++ .......|...
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-----~~~~~~~h~~~ 230 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-----CVATLEGHMSN 230 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-----EEEEEECCSSC
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-----cceeeCCCCCC
Confidence 9999999999999999887766553 335578888876 77899999999999999998754 44445678889
Q ss_pred eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC--EEEEEeCCCcEEEEECCC
Q psy6127 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ--FVASGSTDGQVHIWNAER 471 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~--~l~sgs~dg~I~iwd~~~ 471 (515)
|.+++|+|++++|++|+.||+|++||+.+++..+.+..+.. .+.+++|+|++. ++++|+.|| +.+|++..
T Consensus 231 v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE---RSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSS---SEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCc---cEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 99999999999999999999999999999999998876544 489999999875 578777665 77888754
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=351.24 Aligned_cols=354 Identities=15% Similarity=0.164 Sum_probs=301.8
Q ss_pred hheeecccccccccccCCCCcCCCcchhhc----cccccccCCcee-EEEEEEee--ccccceeeeeeeCCCCcEEEEcc
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELL----HSLSSLESPHFV-SLFVTFVS--RVLTMAASLAHSRSSRTITKCSE 205 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~----~~l~~~~~~~~~-~~~~~~~~--~~~~~~~~l~~s~~~~~~i~~wd 205 (515)
++||++. ++.| .+||..++ +.+..+.+|... +.++.+.+ ... +.++++.++.+++|+
T Consensus 31 ~~l~~~~-~~~v----------~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~-----~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 31 NAIAYPC-GKSA----------FVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-----YLCSGDESGKVIVWG 94 (615)
T ss_dssp TEEEEEE-TTEE----------EEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC-----EEEEEETTSEEEEEE
T ss_pred CEEEEec-CCeE----------EEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC-----EEEEecCCCEEEEEe
Confidence 5677766 5677 99999999 899999999877 88888887 432 334677789999999
Q ss_pred ceee--------eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCeeeeEecCCCCceeEEEEec
Q psy6127 206 NLVR--------SYRVAKVFRENTDKINSLDYSSDGSLLISCSDD----DQIIIYDCEQGTSKNTINSKKYGVDLIKFTH 273 (515)
Q Consensus 206 ~~~~--------~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 273 (515)
+. ..++...+.+|...|.+++|+|++++|++++.+ +.|++|| .++....+.+|...|.+++|+|
T Consensus 95 --~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 95 --WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp --EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred --CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC
Confidence 65 447888999999999999999999999999988 6888888 6778889999999999999999
Q ss_pred CCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC---CeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCeEEEE----
Q psy6127 274 SKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR---KVSSLNLSPV-DDSFISGSYDKTVRVWDLRQPNNVGMI---- 345 (515)
Q Consensus 274 ~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~---~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~---- 345 (515)
+++.+++.+ +.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.||.|++||+++++.+..+
T Consensus 171 ~~~~~l~~~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 249 (615)
T 1pgu_A 171 SRPMRSMTV-GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ 249 (615)
T ss_dssp SSSCEEEEE-ETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT
T ss_pred CCCcEEEEE-eCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccc
Confidence 998443333 4799999999999999999999999 9999999999 999999999999999999999999988
Q ss_pred -ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC-----C-----------------------------------
Q psy6127 346 -QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG-----P----------------------------------- 384 (515)
Q Consensus 346 -~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~-----~----------------------------------- 384 (515)
.+...+.+++|+ +++++++++.|+.|++||+++++.. .
T Consensus 250 ~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 250 EPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp BCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTE
T ss_pred cccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCC
Confidence 566779999999 9999999999999999997632100 0
Q ss_pred ---cee--------------------------------------------------------------------------
Q psy6127 385 ---FAS-------------------------------------------------------------------------- 387 (515)
Q Consensus 385 ---~~~-------------------------------------------------------------------------- 387 (515)
...
T Consensus 329 ~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~ 408 (615)
T 1pgu_A 329 DEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQ 408 (615)
T ss_dssp EEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSC
T ss_pred CcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCC
Confidence 000
Q ss_pred ----------------------------------------------------------------------e--ecCCCCC
Q psy6127 388 ----------------------------------------------------------------------F--KCPGERG 395 (515)
Q Consensus 388 ----------------------------------------------------------------------~--~~~~~~~ 395 (515)
. .....|.
T Consensus 409 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 488 (615)
T 1pgu_A 409 PKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLR 488 (615)
T ss_dssp EEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCS
T ss_pred ceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCcc
Confidence 0 1123456
Q ss_pred cCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec----------CCCEEEEEeCCCcEE
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP----------DSQFVASGSTDGQVH 465 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp----------~g~~l~sgs~dg~I~ 465 (515)
..|++++|+|++++|++++.|+.|++||+.+++.+..+.+. +...|++++|+| ++++|++++.||.|+
T Consensus 489 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~ 566 (615)
T 1pgu_A 489 AKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF--RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 566 (615)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC--CSSCEEEEEECCCC------CCSCCEEEEEETTSCEE
T ss_pred CceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC--CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEE
Confidence 78899999999999999999999999999999988877651 334599999999 999999999999999
Q ss_pred EEECCCC-eEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 466 IWNAERG-YKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 466 iwd~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
+||+.++ +++..+.+ |.+.|++++|+|++. |++++.| +++|+++.
T Consensus 567 iw~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 567 IYSVKRPMKIIKALNA-HKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEESSCTTCCEEETTS-STTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEECCCCceechhhhc-CccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9999998 78888887 999999999999999 9998865 99999875
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=320.29 Aligned_cols=295 Identities=18% Similarity=0.285 Sum_probs=252.8
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCe-----eeeEecCCCCceeEEEEecCCCeEEEE
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSD-GSLLISCSDDDQIIIYDCEQGT-----SKNTINSKKYGVDLIKFTHSKTTAIHA 281 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd-~~~lasgs~dg~i~iwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~ 281 (515)
.+..++..+|+||++.|++++|+|+ +++|||||.||+|+|||+.+++ +...+.+|...|.+++|+|++..++++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 5566778899999999999999997 6899999999999999987643 466789999999999999999987766
Q ss_pred EeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCC
Q psy6127 282 STKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPE 359 (515)
Q Consensus 282 s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~ 359 (515)
+ .|+.|++|+............+...+....++++++.|++++.|+.+++||+......... .+...+..++|+++
T Consensus 105 ~--~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 105 S--WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp E--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred c--ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 5 7999999999999999888889999999999999999999999999999999876554433 33456788899876
Q ss_pred C--CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 360 G--LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 360 ~--~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
+ ..+++++.|+.|++||+++.+ .......|...|++++|+|++++|++++.|+.|++||+++++++..+..+
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~-----~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~- 256 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCK-----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG- 256 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-
T ss_pred CCCcEEEEEcCCCEEEEEECCCCc-----eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-
Confidence 4 578899999999999998754 44445678889999999999999999999999999999999998888754
Q ss_pred cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC--------CCCCCeEEEEECCCCCEEEEeeCC--EEE
Q psy6127 438 NNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG--------DHPSAVQSLQFNPKYHMLASACSN--MAF 507 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~--------~h~~~V~~l~~sp~~~~las~~~d--v~i 507 (515)
..+.+++|+|++.+++ ++.|+.|++||++++..+..+.. .|...|++++|+|++++|++|+.| ++|
T Consensus 257 ---~~v~~~~~~~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 257 ---DIINALCFSPNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp ---SCEEEEEECSSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ---ceEEeeecCCCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 3489999999887655 55799999999999888776642 388899999999999999999865 999
Q ss_pred EcCCCCC
Q psy6127 508 WIPTLSA 514 (515)
Q Consensus 508 W~~~~~~ 514 (515)
|+++.+.
T Consensus 333 W~~~tGt 339 (340)
T 4aow_A 333 WQVTIGT 339 (340)
T ss_dssp EEEEC--
T ss_pred EeCCCcC
Confidence 9998754
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=322.08 Aligned_cols=297 Identities=19% Similarity=0.226 Sum_probs=248.7
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEcccee---eeeEeeeeccccCCcEEEEEEcCCCCEEEE
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV---RSYRVAKVFRENTDKINSLDYSSDGSLLIS 238 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~---~~~~~~~~~~~h~~~I~~l~~spd~~~las 238 (515)
.....++++|...|.++.+.+.... +.++++.|+.+++|+-.- +...++..+++|...|.+++|+|++++|++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~----~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 82 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPN----LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALS 82 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTT----EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCcc----EEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEE
Confidence 4455678999887888888754311 345888999999998221 234567889999999999999999999999
Q ss_pred EeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCC
Q psy6127 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPV 318 (515)
Q Consensus 239 gs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 318 (515)
|+.|++|++||+.+++....+.+|...|.+++|+|++..+++++ .|++|++||++ ++.+..+.+|...|.+++|.|.
T Consensus 83 ~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGS--RDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEE--TTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred EeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence 99999999999999999999999999999999999998777654 79999999996 5677888999999999999985
Q ss_pred ------CCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC
Q psy6127 319 ------DDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391 (515)
Q Consensus 319 ------~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~ 391 (515)
+..+++++.|+.|++||+++++....+ .+...+.+++|+|++++|++++.||.|++||+++.+ .....
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~-----~~~~~ 234 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK-----AMYTL 234 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-----EEEEE
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----EEEEe
Confidence 448999999999999999999887776 456679999999999999999999999999998753 22222
Q ss_pred CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc-----cCCCCCEEEEEecCCCEEEEEeCCCcEEE
Q psy6127 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL-----NNNASPLEATFTPDSQFVASGSTDGQVHI 466 (515)
Q Consensus 392 ~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~i~~~~~sp~g~~l~sgs~dg~I~i 466 (515)
. ....+.+++|+|++.++++++.+ .+++|++..+.....+..+. .+...+.+++|+|||++|++|+.||.|++
T Consensus 235 ~-~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~v 312 (319)
T 3frx_A 235 S-AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRV 312 (319)
T ss_dssp E-CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred c-CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEE
Confidence 2 23579999999999999988765 59999998887776665321 23445889999999999999999999999
Q ss_pred EECCCC
Q psy6127 467 WNAERG 472 (515)
Q Consensus 467 wd~~~~ 472 (515)
||+.++
T Consensus 313 Wd~~t~ 318 (319)
T 3frx_A 313 WQVMTA 318 (319)
T ss_dssp EEEEEC
T ss_pred EEEeec
Confidence 998764
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-41 Score=367.00 Aligned_cols=352 Identities=14% Similarity=0.144 Sum_probs=272.3
Q ss_pred hhheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee
Q psy6127 132 LKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY 211 (515)
Q Consensus 132 ~~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~ 211 (515)
-++||+|+.+|.| ++||..+++.+..+. |...|.++.|.+ .. +.++++.|+.+++|| +...
T Consensus 29 g~~lAsgs~Dg~I----------~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~-----~L~S~s~D~~v~lWd--~~~~ 89 (902)
T 2oaj_A 29 QNLLAIATVTGEV----------HIYGQQQVEVVIKLE-DRSAIKEMRFVK-GI-----YLVVINAKDTVYVLS--LYSQ 89 (902)
T ss_dssp TTEEEEEETTSEE----------EEECSTTCEEEEECS-SCCCEEEEEEET-TT-----EEEEEETTCEEEEEE--TTTC
T ss_pred CCEEEEEeCCCEE----------EEEeCCCcEEEEEcC-CCCCEEEEEEcC-CC-----EEEEEECcCeEEEEE--CCCC
Confidence 3689999999999 999998887766654 444577777776 21 234777899999999 7777
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-----------eEecCCCCceeEEEEecCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-----------NTINSKKYGVDLIKFTHSKTTAIH 280 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~l~~ 280 (515)
+++.++. |.+.|++++|+|++++|++|+.||+|++||+.+++.. ..+.+|..+|.+++|+|++...++
T Consensus 90 ~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 90 KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 8888775 7789999999999999999999999999999988754 234678899999999997644444
Q ss_pred EEeeCCCeEEEEECCCCeeeEEecCC------------------CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE
Q psy6127 281 ASTKVDATLRYLSLHDNKYVRYFPGH------------------VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~~~~~~~~~h------------------~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 342 (515)
+ ++.|+.| +||+++++.+..+..| ...|++++|+|+|++|++|+.||+|++||+++++++
T Consensus 169 ~-g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 169 I-SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp E-ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred E-EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 3 3579999 9999999998888766 578999999999999999999999999999776543
Q ss_pred EEEe------c-------------CCCeeEEEE-----------------------------------------------
Q psy6127 343 GMIQ------L-------------SGNKPIAAY----------------------------------------------- 356 (515)
Q Consensus 343 ~~~~------~-------------~~~~~~~~~----------------------------------------------- 356 (515)
.... + ...+.+++|
T Consensus 247 ~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~ 326 (902)
T 2oaj_A 247 MARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKN 326 (902)
T ss_dssp EEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHH
T ss_pred EEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhh
Confidence 3100 0 001112222
Q ss_pred --------------------------------------------------------------------------------
Q psy6127 357 -------------------------------------------------------------------------------- 356 (515)
Q Consensus 357 -------------------------------------------------------------------------------- 356 (515)
T Consensus 327 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~ 406 (902)
T 2oaj_A 327 YYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATT 406 (902)
T ss_dssp HHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEE
T ss_pred hhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeE
Confidence
Q ss_pred -------------------------------------CCCCCEEEEEECCCcEEEEEeecCCCCCceeeec------CCC
Q psy6127 357 -------------------------------------DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC------PGE 393 (515)
Q Consensus 357 -------------------------------------s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~------~~~ 393 (515)
+|+++.+++|+.|++|++||+..+.......+.. ...
T Consensus 407 ~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~ 486 (902)
T 2oaj_A 407 SMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKA 486 (902)
T ss_dssp EEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCS
T ss_pred EEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCC
Confidence 3445566677777777777766543211011110 125
Q ss_pred CCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc---------------------------------------------
Q psy6127 394 RGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN--------------------------------------------- 428 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~--------------------------------------------- 428 (515)
|...|.+++|+|++++||+|+.||+|++||+.+++
T Consensus 487 h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 566 (902)
T 2oaj_A 487 KELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFM 566 (902)
T ss_dssp SSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEE
T ss_pred CCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccc
Confidence 67789999999999999999999999999997662
Q ss_pred eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE--E---c-CCCCCCeEEEEEC-----CCC--
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV--L---D-GDHPSAVQSLQFN-----PKY-- 495 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~--~---~-~~h~~~V~~l~~s-----p~~-- 495 (515)
++..+.+ +...|++++|+||| +||+|+.|++|++||++++..+.. + . + |.+.|++++|+ |||
T Consensus 567 ~~~~l~~---h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~g-h~~~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 567 PSTAVHA---NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGA-QSACVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEECC---CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSS-CCCCEEEEEEEEEECTTSSSE
T ss_pred eeEEEEc---CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccc-cccceEEEEEEEEecCCCCCc
Confidence 2344444 45569999999999 999999999999999988877642 2 2 4 89999999999 885
Q ss_pred -CEEEEeeCC--EEEEcC
Q psy6127 496 -HMLASACSN--MAFWIP 510 (515)
Q Consensus 496 -~~las~~~d--v~iW~~ 510 (515)
++|++++.| +++|++
T Consensus 642 ~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 642 SILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEETTSEEEEEEE
T ss_pred ceEEEEEecCCcEEEEEE
Confidence 899999865 999998
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=327.08 Aligned_cols=291 Identities=22% Similarity=0.315 Sum_probs=252.2
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
+...++++|...|.++.|.+... ..++++.|+.+++|| ..+.+..+.+..|...|.+++|+|+|++|++|+.|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~-----~l~s~s~Dg~v~vWd--~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKR-----RIVSSSQDGKVIVWD--SFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSS-----EEEEEETTSEEEEEE--TTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred EEEEEecCCCCeEEEEEECCCCC-----EEEEEeCCCeEEEEE--CCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 45567889988888888887543 345888999999999 66777888889999999999999999999999999
Q ss_pred CeEEEEECCCC------eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEc
Q psy6127 243 DQIIIYDCEQG------TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLS 316 (515)
Q Consensus 243 g~i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~ 316 (515)
+.+++|++... .....+..|...|.+++|+|++..+++++ .|++|++||+++++.+..+.+|...|.+++|+
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s--~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~ 205 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS--GDGTCALWDVESGQLLQSFHGHGADVLCLDLA 205 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEE
Confidence 99999998643 34566778999999999999999887665 79999999999999999999999999999998
Q ss_pred C--CCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC
Q psy6127 317 P--VDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE 393 (515)
Q Consensus 317 ~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~ 393 (515)
| +++.|++|+.||+|++||+++++++..+. +...+.+++|+|+++.+++|+.|++|++||++.... . .......
T Consensus 206 ~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~--~-~~~~~~~ 282 (354)
T 2pbi_B 206 PSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE--V-AIYSKES 282 (354)
T ss_dssp CCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--E-EEECCTT
T ss_pred eCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--E-EEEcCCC
Confidence 8 46899999999999999999999988884 556799999999999999999999999999987431 1 1111223
Q ss_pred CCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 394 RGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
+...+.+++|+|+++++++|+.|+.|++||+.+++.+..+.+|.. .|.+++|+|+|++|++|+.||+|++|+
T Consensus 283 ~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~---~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 283 IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN---RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS---CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC---cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 345788999999999999999999999999999998888877554 499999999999999999999999996
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=336.51 Aligned_cols=309 Identities=17% Similarity=0.235 Sum_probs=258.1
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCC
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGS 234 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~ 234 (515)
..|+..+.....++.+|...|.++.|.+... +.++++.|+.+++|| ..+.+....+++|...|.+++|+|+|+
T Consensus 49 ~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~-----~l~s~s~D~~v~iWd--~~~~~~~~~~~~h~~~v~~~~~s~~g~ 121 (380)
T 3iz6_a 49 VSFNPTDLVCCRTLQGHSGKVYSLDWTPEKN-----WIVSASQDGRLIVWN--ALTSQKTHAIKLHCPWVMECAFAPNGQ 121 (380)
T ss_dssp CCCCCCCCEEEEEECCCSSCEEEEEECTTSS-----CEEEEETTSEEEEEE--TTTTEEEEEEECCCTTCCCCEECTTSS
T ss_pred cccccceeEEeecccccccEEEEEEEcCCCC-----EEEEEeCCCeEEEEE--CCCCccceEEecCCCCEEEEEECCCCC
Confidence 5688888888889999988888888887543 334888999999999 777888899999999999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCe-------eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe----
Q psy6127 235 LLISCSDDDQIIIYDCEQGT-------SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF---- 303 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~---- 303 (515)
+||+|+.|+.+++||+.+.. ....+.+|...+.++.|.|++...++ +++.|++|++||+.+++.+..+
T Consensus 122 ~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~-s~s~D~~i~~wd~~~~~~~~~~~~~~ 200 (380)
T 3iz6_a 122 SVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLI-TGSGDQTCVLWDVTTGQRISIFGSEF 200 (380)
T ss_dssp EEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEE-EECTTSCEEEECTTTCCEEEEECCCS
T ss_pred EEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEE-EECCCCcEEEEEcCCCcEEEEeeccc
Confidence 99999999999999987532 34567899999999999998654333 3358999999999999988877
Q ss_pred -cCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcC-CCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 304 -PGHVRKVSSLNLSP-VDDSFISGSYDKTVRVWDLR-QPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 304 -~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iwd~~-~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
.+|...|.+++|+| ++++|++|+.|++|++||++ .++.+..+ .+...+.+++|+|++++|++|+.||+|++||+++
T Consensus 201 ~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 201 PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 68999999999987 78899999999999999998 44666666 4566799999999999999999999999999987
Q ss_pred CCCCCceeeec----CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc-ccCCCCCEEEEEecCCCE
Q psy6127 380 YDKGPFASFKC----PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV-LNNNASPLEATFTPDSQF 454 (515)
Q Consensus 380 ~~~~~~~~~~~----~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~sp~g~~ 454 (515)
+... ..+.. ...+...+++++|+|+|+++++|+.||.|++||..+++....+... ..+...|.+++|+|+|++
T Consensus 281 ~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 281 GHQL--QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp TEEE--EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred CcEE--EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 5411 11111 1122335789999999999999999999999999999888777322 345666999999999999
Q ss_pred EEEEeCCCcEEEEECCCCe
Q psy6127 455 VASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 455 l~sgs~dg~I~iwd~~~~~ 473 (515)
|++|+.||.|++|++...+
T Consensus 359 l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 359 LCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEECTTSCEEEEECCSSS
T ss_pred EEEeeCCCCEEEEecCCCc
Confidence 9999999999999987653
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=318.42 Aligned_cols=301 Identities=17% Similarity=0.249 Sum_probs=232.8
Q ss_pred hccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeec-cc-cCCcEEEEEEcCCCCEEEE
Q psy6127 161 LLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVF-RE-NTDKINSLDYSSDGSLLIS 238 (515)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~-~~-h~~~I~~l~~spd~~~las 238 (515)
+.+.+.++++|...|.++.|.+.. ++ +++.|+.+++|+-.....++...+ .+ |.+.|.+++|+|++++||+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~~------la-s~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las 75 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQGI------LA-TGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAA 75 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETTE------EE-EEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEE
T ss_pred ccccceeeccCCCceeeeccCCCE------EE-EEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEE
Confidence 455677888998888888887762 43 778889999998332224556666 44 9999999999999999999
Q ss_pred EeCCCeEEEEECCC-------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC----CeeeEEecCCC
Q psy6127 239 CSDDDQIIIYDCEQ-------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD----NKYVRYFPGHV 307 (515)
Q Consensus 239 gs~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~----~~~~~~~~~h~ 307 (515)
|+.|++|++||... .+....+.+|...|.+++|+|+++++++++ .|++|++||+.. .+++..+.+|.
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 99999999999853 356778899999999999999999777664 799999999943 25678889999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--CeEEEE-ecCCCeeEEEECCC--CCEEEEEECCCcEEEEEeecCCC
Q psy6127 308 RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP--NNVGMI-QLSGNKPIAAYDPE--GLAFAIGVNSDSIKLYDVRSYDK 382 (515)
Q Consensus 308 ~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~--~~~~~~-~~~~~~~~~~~s~~--~~~l~~g~~dg~i~i~d~~~~~~ 382 (515)
..|.+++|+|++++|++|+.|++|++||..++ +++..+ .+...+.+++|+|+ +..+++|+.|++|++||++....
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 99999999999999999999999999999876 455666 45567999999998 77899999999999999986432
Q ss_pred CCc---eeee-cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCC-CCEEEEEec--CCCEE
Q psy6127 383 GPF---ASFK-CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA-SPLEATFTP--DSQFV 455 (515)
Q Consensus 383 ~~~---~~~~-~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-~i~~~~~sp--~g~~l 455 (515)
... .... ....|...|.+++|+|++ +|++++.||.|++||..+++..........+.. .+.+++|+| ++++|
T Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 234 DDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL 312 (330)
T ss_dssp TSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCE
T ss_pred cccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEE
Confidence 111 1122 233478899999999765 889999999999999987743211111122333 589999999 78999
Q ss_pred EEEeCCCcEEEEECCC
Q psy6127 456 ASGSTDGQVHIWNAER 471 (515)
Q Consensus 456 ~sgs~dg~I~iwd~~~ 471 (515)
++|+.||.|++||+++
T Consensus 313 as~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 313 ATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEETTSEEEEEEC--
T ss_pred EEecCCCcEEEEEecc
Confidence 9999999999999864
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=319.27 Aligned_cols=287 Identities=16% Similarity=0.264 Sum_probs=255.3
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
...+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|+++.+++++ .|+.|++||
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd 102 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS--ADYSIKLWD 102 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTTEEEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe--CCCeEEEEE
Confidence 356889999999999999999999999999999999999999999999999999999999999887665 799999999
Q ss_pred CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCCe-----------EEEE-ecCC--CeeEE
Q psy6127 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD-----KTVRVWDLRQPNN-----------VGMI-QLSG--NKPIA 354 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~-----------~~~~-~~~~--~~~~~ 354 (515)
+.+++.+..+. |...|.+++|+|+++.+++++.+ +.|++||++.+.. ...+ .+.. .+.++
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 99999998887 88999999999999999999999 9999999986642 1222 2222 68899
Q ss_pred EECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 355 AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 355 ~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
+|+|+++.+++++.||.|++||+++.. ........+...|.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNY----EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTT----EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCc----EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 999999999999999999999998732 1344445677899999999999999999999999999999999888887
Q ss_pred ccccCCCCCEEEEEecCCCEEEEEeCCC--------------cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEE
Q psy6127 435 GVLNNNASPLEATFTPDSQFVASGSTDG--------------QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500 (515)
Q Consensus 435 ~~~~~~~~i~~~~~sp~g~~l~sgs~dg--------------~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las 500 (515)
....+..++|+|+++++++++.++ .+++||..+++.+..+.+ |.+.|++++|+|++++|++
T Consensus 258 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 258 ----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYAS 332 (369)
T ss_dssp ----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEE
T ss_pred ----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEE
Confidence 334489999999999999999888 899999999999999988 9999999999999999999
Q ss_pred eeCC--EEEEcCCC
Q psy6127 501 ACSN--MAFWIPTL 512 (515)
Q Consensus 501 ~~~d--v~iW~~~~ 512 (515)
++.| +++|+++.
T Consensus 333 ~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 333 GGEDGFIRLHHFEK 346 (369)
T ss_dssp EETTSEEEEEEECH
T ss_pred EcCCCeEEEEECcc
Confidence 9865 99999863
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=318.95 Aligned_cols=309 Identities=16% Similarity=0.187 Sum_probs=243.2
Q ss_pred ccccccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE--eee-eccccCCcEEEEEEcCCCCEEE
Q psy6127 162 LHSLSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR--VAK-VFRENTDKINSLDYSSDGSLLI 237 (515)
Q Consensus 162 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~--~~~-~~~~h~~~I~~l~~spd~~~la 237 (515)
.+.+.++++|.. .+.+++|.+... +.++++.|+.+++|+ ....+ +.. ...+|...|.+++|+|++++||
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~-----~las~~~D~~i~iw~--~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 77 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGT-----LLASCGGDRRIRIWG--TEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA 77 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSS-----CEEEEETTSCEEEEE--EETTEEEEEEEECSSCSSCEEEEEECTTSSEEE
T ss_pred EEEeeeecCCCCCcEEEEEECCCCC-----EEEEEcCCCeEEEEE--cCCCcceeeeeeccccCCcEEEEEECCCCCEEE
Confidence 456678888865 677777776543 334788899999998 54433 222 3479999999999999999999
Q ss_pred EEeCCCeEEEEECCCC--eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC---eeeEEecCCCCCeEE
Q psy6127 238 SCSDDDQIIIYDCEQG--TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN---KYVRYFPGHVRKVSS 312 (515)
Q Consensus 238 sgs~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~---~~~~~~~~h~~~v~~ 312 (515)
+|+.|+++++||..++ +....+.+|...|.+++|+|+++.+++++ .|++|++||+.++ ..+..+.+|...|.+
T Consensus 78 s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 155 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKH 155 (345)
T ss_dssp EEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEE
T ss_pred EEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEE
Confidence 9999999999998876 45788999999999999999999877665 7999999999876 456778899999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCCeE--EEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc----
Q psy6127 313 LNLSPVDDSFISGSYDKTVRVWDLRQPNNV--GMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF---- 385 (515)
Q Consensus 313 l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~---- 385 (515)
++|+|++++|++|+.|++|++||.++++.. ..+ .+...+.+++|+|++++|++++.|++|++||.........
T Consensus 156 ~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 156 VVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp EEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee
Confidence 999999999999999999999999887643 344 4556799999999999999999999999999865332110
Q ss_pred ------eee-ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce----eEEe--eccccCCCCCEEEEEecCC
Q psy6127 386 ------ASF-KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC----VQSL--SGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 386 ------~~~-~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~----~~~~--~~~~~~~~~i~~~~~sp~g 452 (515)
... .....|...|.+++|+|++..+++++.|+.|++|+...+.. ...+ ..+..|...|.+++|+|++
T Consensus 236 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp ---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred ccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence 111 12234778899999999999999999999999999875431 1111 2223456679999999998
Q ss_pred -CEEEEEeCCCcEEEEECCCCeEEEEEc
Q psy6127 453 -QFVASGSTDGQVHIWNAERGYKVCVLD 479 (515)
Q Consensus 453 -~~l~sgs~dg~I~iwd~~~~~~~~~~~ 479 (515)
.+|++|+.||+|++|++.+++.....+
T Consensus 316 ~~~laS~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 316 PGLLASCSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp TTEEEEEETTSCEEEEEECC--------
T ss_pred ceEEEEcCCCCcEEEEEecCCCCccccc
Confidence 599999999999999999887765443
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=315.20 Aligned_cols=279 Identities=14% Similarity=0.205 Sum_probs=242.4
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee---eEec--CCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK---NTIN--SKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
..+|.+.|++++|+|++++|++++ ||.|++||+.+++.. ..+. .|...|.+++|+|+++.+++++ .|+.|++
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~ 123 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG--EASTLSI 123 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE--SSSEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc--CCCcEEE
Confidence 348999999999999999999999 999999999876533 3333 7889999999999998877665 7999999
Q ss_pred EECCCCe--eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEEC
Q psy6127 292 LSLHDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 292 wd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~ 368 (515)
||+.+++ ....+..|...|.+++|+|+++++++++.||.|++||+++++....+. +...+.+++|+|+++.+++++.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 9999887 667788899999999999999999999999999999999999888875 4567999999999999999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
||.|++||+++.+ .... ..+...+.+++|+|+++++++++.++.|++||+++++.. .+.. +...+.+++|
T Consensus 204 dg~i~~~d~~~~~-----~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~---~~~~v~~~~~ 273 (337)
T 1gxr_A 204 DNTVRSWDLREGR-----QLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHL---HESCVLSLKF 273 (337)
T ss_dssp TSEEEEEETTTTE-----EEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECC---CSSCEEEEEE
T ss_pred CCcEEEEECCCCc-----eEee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcC---CccceeEEEE
Confidence 9999999998754 2211 135567999999999999999999999999999988754 3333 4455999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
+|++++|++++.||.|++||+.+++.+.... |...|++++|+|+++++++++.+ +++|++
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEECCCCeEEEEec--CCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999999999999999999999999886654 88999999999999999998865 999986
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-40 Score=330.54 Aligned_cols=317 Identities=15% Similarity=0.152 Sum_probs=261.6
Q ss_pred EEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee
Q psy6127 176 LFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS 255 (515)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~ 255 (515)
.++++.++. ++ +++.++.+++|+ ....+....+.+| ..+....|+|++++|++|+.||.|++||+.+++.
T Consensus 62 ~~~s~~g~~------l~-~~~~d~~v~i~d--~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 62 NTFEKVGSH------LY-KARLDGHDFLFN--TIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp CEEEEEETT------EE-EEEETTEEEEEE--CCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE
T ss_pred eeeeecCCe------EE-EEEcCCcEEEEE--ecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcce
Confidence 345555554 33 566678999999 7777777777777 5555667899999999999999999999999999
Q ss_pred eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy6127 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335 (515)
Q Consensus 256 ~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd 335 (515)
...+..|...|.+++|+|+++.+++++ .|+.|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|++|++||
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSS--QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eeecccccCccEEEEECCCCCEEEEEe--CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 888899999999999999999777654 799999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEec----C---------------------CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec
Q psy6127 336 LRQPNNVGMIQL----S---------------------GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC 390 (515)
Q Consensus 336 ~~~~~~~~~~~~----~---------------------~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~ 390 (515)
+++++.+..+.. . ..+.+++|+|+++++++|+.||.|++||+++.. .....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~ 285 (420)
T 3vl1_A 210 CGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE----QTIQL 285 (420)
T ss_dssp TTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC----EEEEE
T ss_pred CCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc----eeEEc
Confidence 999998888753 1 234445668999999999999999999998754 23333
Q ss_pred CCCCCcCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCce-eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 391 PGERGCEWTGLKFSPDGK-LILVSTNGSIIRLFDAFNGNC-VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 391 ~~~~~~~i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
...+...+.+++|+|+++ ++++++.||.|++||+++++. +..+..+. ...+.++ +.+++++|++++.||.|++|+
T Consensus 286 ~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~--~~~v~~~-~~~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 286 PSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE--GTPINNV-YFAAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp CCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST--TSCEEEE-EEETTEEEEEETTTEEEEEEE
T ss_pred ccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC--CCCceEE-EeCCCCEEEEecCCccEEEEe
Confidence 456788999999999999 999999999999999998754 66666543 2336666 556888999999999999999
Q ss_pred CCCCe---------EEEEEcCCCCCCeEEEEECCCCC----EEEEeeCC-EEEEcCCC
Q psy6127 469 AERGY---------KVCVLDGDHPSAVQSLQFNPKYH----MLASACSN-MAFWIPTL 512 (515)
Q Consensus 469 ~~~~~---------~~~~~~~~h~~~V~~l~~sp~~~----~las~~~d-v~iW~~~~ 512 (515)
+.... ....+.. |.+.|.+++|+|++. ++++|+.. +.+|+++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 363 ISDPESERPAIEFETPTFLVS-NDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCTTCCSCEECTTSCEEECC-SSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCCCCccceeccCccEEcc-CCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 87631 1223344 888999999999998 66666544 99999875
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=380.01 Aligned_cols=353 Identities=16% Similarity=0.252 Sum_probs=303.6
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
++||+++.++.| ++||..+++.+.++.+|...+.++.|.+..... +.++++.|+.+++|| +..++
T Consensus 670 ~~l~s~~~d~~v----------~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~l~sg~~d~~v~vwd--~~~~~ 734 (1249)
T 3sfz_A 670 SYIATCSADKKV----------KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL---LLATGSNDFFLKLWD--LNQKE 734 (1249)
T ss_dssp SEEEEEETTSEE----------EEEETTTCCEEEEEECCSSCEEEEEECSSSSCC---EEEEEETTSCEEEEE--TTSSS
T ss_pred CEEEEEeCCCeE----------EEEECCCCceEEEEcCCCCcEEEEEEecCCCce---EEEEEeCCCeEEEEE--CCCcc
Confidence 678899999999 999999999999999998878888887643322 445788899999999 78889
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEe---------------------------------
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI--------------------------------- 259 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~--------------------------------- 259 (515)
+..++.+|.+.|++++|+|++++|++|+.||+|++||+.+++....+
T Consensus 735 ~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 814 (1249)
T 3sfz_A 735 CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKII 814 (1249)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEE
T ss_pred hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEE
Confidence 99999999999999999999999999999999999998876544332
Q ss_pred ----------------------cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC
Q psy6127 260 ----------------------NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 260 ----------------------~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 317 (515)
.+|...+.+++|+|++..+++++ .|+.|++||+.++..+..+.+|...|.+++|+|
T Consensus 815 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 815 VAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL--SQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp EEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEEC--SSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 16678899999999998777664 799999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCC-----------------------------------------------------------
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQ----------------------------------------------------------- 338 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~----------------------------------------------------------- 338 (515)
+++.+++++.||.|++||+.+
T Consensus 893 dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 972 (1249)
T 3sfz_A 893 DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH 972 (1249)
T ss_dssp TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence 999999999999999998542
Q ss_pred --------------------CCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 339 --------------------PNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 339 --------------------~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
++....+ .+...+.+++|+|+++++++++.||.|++||+.++. . .....+...
T Consensus 973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~-----~-~~~~~~~~~ 1046 (1249)
T 3sfz_A 973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD-----Y-VFLQAHQET 1046 (1249)
T ss_dssp SSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTE-----E-ECCBCCSSC
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc-----e-EEEecCCCc
Confidence 1111111 234457789999999999999999999999998753 2 233467789
Q ss_pred eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy6127 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV 477 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~ 477 (515)
+.+++|+|++ .+++++.|+.|++||+.+++....+.+|... +.+++|+|+++++++++.||.|++||+.+++++..
T Consensus 1047 v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~ 1122 (1249)
T 3sfz_A 1047 VKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGT---VLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHE 1122 (1249)
T ss_dssp EEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSC---CCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBC
T ss_pred EEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCc---EEEEEECCCCCEEEEEcCCCcEEEEECCCcceeee
Confidence 9999999976 5778999999999999999999888875544 89999999999999999999999999999999988
Q ss_pred EcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 478 LDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 478 ~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
+.+ |.+.|++++|+|+++++++++.| +++|++...
T Consensus 1123 l~~-h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1123 LKG-HNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159 (1249)
T ss_dssp CCC-CSSCEEEEEECSSSSEEEEEETTSCCCEEESSSS
T ss_pred ecc-CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 888 99999999999999999999865 999998754
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-40 Score=320.40 Aligned_cols=298 Identities=16% Similarity=0.212 Sum_probs=227.7
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEee---------eeccccCCcEE
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVA---------KVFRENTDKIN 225 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~---------~~~~~h~~~I~ 225 (515)
+.|+....... .+...+.++.|.+.... ++ +++ +..+++|+..+..++.. .....|...|.
T Consensus 17 r~w~~~~~~~~----~~~~~v~~~~fs~dG~~----l~-~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (344)
T 4gqb_B 17 REWNLPPNAPA----CMERQLEAARYRSDGAL----LL-GAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVA 86 (344)
T ss_dssp ------CCSCS----SCCSEEEEEEECTTSCE----EE-EEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEE
T ss_pred cccCCCCCCcc----cccCCEEEEEECCCCCE----EE-EEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEE
Confidence 67877654332 23333556666654421 22 333 44577887443333211 11234567899
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE----ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 226 SLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT----INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 226 ~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
+++|+|++ .|++|+.||+|+|||+.+++.... ..+|...|.+++|+|+++.+++++ .|++|++||+++++++.
T Consensus 87 ~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs--~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 87 DLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS--KDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEE
T ss_pred EEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEEE
Confidence 99999985 688999999999999998876544 458999999999999999877664 79999999999999999
Q ss_pred EecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEe---cCCCeeEEEECCC-CCEEEEEECCCcEEEEE
Q psy6127 302 YFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQ---LSGNKPIAAYDPE-GLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d 376 (515)
.+.+|.+.|.+++|+|++. .|++++.|++|++||+++++....+. ....+.+++|+|+ ++++++|+.||+|++||
T Consensus 164 ~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 164 SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 9999999999999999985 78999999999999999999888763 2334788999995 57889999999999999
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-E
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-F 454 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~ 454 (515)
+++++ .......|...|++++|+|++ ++|++|+.|++|++||+.+++... +.+ |...|++++|+|+++ +
T Consensus 244 ~~~~~-----~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~---H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 244 TKSTS-----CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQA---HRDFVRDATWSPLNHSL 314 (344)
T ss_dssp SCC-------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECC---CSSCEEEEEECSSSTTE
T ss_pred CCCCc-----EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcC---CCCCEEEEEEeCCCCeE
Confidence 98765 333345788899999999998 578999999999999999987653 444 445599999999986 6
Q ss_pred EEEEeCCCcEEEEECCCCeE
Q psy6127 455 VASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 455 l~sgs~dg~I~iwd~~~~~~ 474 (515)
|++++.||+|++|++.+...
T Consensus 315 las~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEEETTSCEEEEECCC---
T ss_pred EEEEcCCCeEEEEECCCCCC
Confidence 77999999999999987543
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=325.54 Aligned_cols=330 Identities=20% Similarity=0.318 Sum_probs=282.4
Q ss_pred cchhhccccccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCE
Q psy6127 157 WDFELLHSLSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSL 235 (515)
Q Consensus 157 wd~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~ 235 (515)
|.....+....+.+|.. ++.+++++++. + ++++.|+.+++|+ ..++++...+.+|.+.|.+++|+ +++
T Consensus 103 w~~~~~~~~~~l~~h~~~v~~~~~~~g~~------l-~sg~~dg~i~vwd--~~~~~~~~~~~~h~~~v~~~~~~--~~~ 171 (445)
T 2ovr_B 103 WRRGELKSPKVLKGHDDHVITCLQFCGNR------I-VSGSDDNTLKVWS--AVTGKCLRTLVGHTGGVWSSQMR--DNI 171 (445)
T ss_dssp HHHSCCCCCEEEECSTTSCEEEEEEETTE------E-EEEETTSCEEEEE--TTTCCEEEECCCCSSCEEEEEEE--TTE
T ss_pred ccCCCcceeEEecccCCCcEEEEEEcCCE------E-EEEECCCcEEEEE--CCCCcEEEEEcCCCCCEEEEEec--CCE
Confidence 55444555667888854 56778887553 3 4778899999999 77889999999999999999997 569
Q ss_pred EEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEE
Q psy6127 236 LISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~ 315 (515)
+++|+.||+|++||+.+++....+.+|...|.+++|++ +.++++ +.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 172 l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~--s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 172 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSG--SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--TEEEEE--ETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC--CEEEEE--eCCCEEEEEECCCCcEEEEEcCCcccEEEEEE
Confidence 99999999999999999999999999999999999964 445444 58999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCC
Q psy6127 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGER 394 (515)
Q Consensus 316 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 394 (515)
+++.+++|+.||.|++||+++++.+..+. +...+.+++| ++..+++++.||.|++||+++++ .......|
T Consensus 248 --~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~-----~~~~~~~~ 318 (445)
T 2ovr_B 248 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN-----CIHTLTGH 318 (445)
T ss_dssp --CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC-----EEEEECCC
T ss_pred --CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC-----EEEEEcCC
Confidence 68899999999999999999999888885 4456778888 88999999999999999998865 44444567
Q ss_pred CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
...+.++.+ +++++++++.||.|++||+++++++..+..+..+...|.+++|+ ++++++|+.||.|++||+.+++.
T Consensus 319 ~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 319 QSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp CSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred cccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCce
Confidence 777877777 56699999999999999999999999998866677779999995 68999999999999999999999
Q ss_pred EEEEc----CCCCCCeEEEEECCCCCEEEEeeCC------EEEEcCCCCC
Q psy6127 475 VCVLD----GDHPSAVQSLQFNPKYHMLASACSN------MAFWIPTLSA 514 (515)
Q Consensus 475 ~~~~~----~~h~~~V~~l~~sp~~~~las~~~d------v~iW~~~~~~ 514 (515)
+..+. ..|.+.|++++|+|++.++++++.| +.+||++..+
T Consensus 395 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 395 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCCC
T ss_pred eeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCCC
Confidence 98882 2388899999999999999998743 7799988764
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=325.76 Aligned_cols=292 Identities=15% Similarity=0.254 Sum_probs=251.2
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe------eeeEecCCCCceeEEEEecC----C---Ce
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT------SKNTINSKKYGVDLIKFTHS----K---TT 277 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~ 277 (515)
..+.+.+++|.+.|++++|+| ++|++|+.||.|++||+.+++ ....+..|...|.+++|+|+ + ..
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 355678899999999999999 799999999999999999887 78888999999999999999 7 76
Q ss_pred EEEEEeeCCCeEEEEECCCCee-----eEEecCC-----CCCeEEEEEc----CCCCE-EEEEeCCCcEEEEEcCC----
Q psy6127 278 AIHASTKVDATLRYLSLHDNKY-----VRYFPGH-----VRKVSSLNLS----PVDDS-FISGSYDKTVRVWDLRQ---- 338 (515)
Q Consensus 278 l~~~s~~~d~~v~vwd~~~~~~-----~~~~~~h-----~~~v~~l~~~----~~~~~-l~s~s~dg~i~iwd~~~---- 338 (515)
+++++ .|+.|++||+.+++. ...+..| ...|.+++|+ |+++. |++++.||.|++||+++
T Consensus 84 l~s~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 84 VATTS--FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEE--TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEEc--CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 66554 799999999998887 8888888 5999999999 99999 99999999999999998
Q ss_pred --CCeEE-----EEe--------cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC---C---CcC
Q psy6127 339 --PNNVG-----MIQ--------LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE---R---GCE 397 (515)
Q Consensus 339 --~~~~~-----~~~--------~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~---~---~~~ 397 (515)
++.+. .+. +...+.+++|+|++ .+++++.||.|++||+++.+ ....... | ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLR-----PLYNFESQHSMINNSNS 235 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE-----EEEEEECCC---CCCCC
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc-----eeEEEeccccccccCCc
Confidence 65554 553 35668999999999 99999999999999998743 2222233 6 789
Q ss_pred eEEEEEcCCCCEEEEEECC---CcEEEEECCCCceeEEeeccc----------cCCCCCEEEEEecCCCEEEEEeCCCcE
Q psy6127 398 WTGLKFSPDGKLILVSTNG---SIIRLFDAFNGNCVQSLSGVL----------NNNASPLEATFTPDSQFVASGSTDGQV 464 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~~----------~~~~~i~~~~~sp~g~~l~sgs~dg~I 464 (515)
+.+++|+|++++|++++.| +.|++||+++++.+..+.... .+...+.+++|+|++++|++++.||.|
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 9999999999999999999 999999999999988887610 033459999999999999999999999
Q ss_pred EEEECCCCeEEEEEc------CCC---------------CCCeEEEEECCCC----------CEEEEeeCC--EEEEcCC
Q psy6127 465 HIWNAERGYKVCVLD------GDH---------------PSAVQSLQFNPKY----------HMLASACSN--MAFWIPT 511 (515)
Q Consensus 465 ~iwd~~~~~~~~~~~------~~h---------------~~~V~~l~~sp~~----------~~las~~~d--v~iW~~~ 511 (515)
++||+.+++++..+. . | ...|++++|+|++ .+|++++.| +++|+++
T Consensus 316 ~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 316 RFWDVKTKERITTLNMHCDDIE-IEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEETTTTEEEEEEECCGGGCS-SGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EEEEcCCCceeEEEecccCccc-chhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 999999999999998 6 7 8999999999998 799998865 9999987
Q ss_pred CC
Q psy6127 512 LS 513 (515)
Q Consensus 512 ~~ 513 (515)
.+
T Consensus 395 ~g 396 (397)
T 1sq9_A 395 GG 396 (397)
T ss_dssp C-
T ss_pred CC
Confidence 53
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=317.44 Aligned_cols=300 Identities=15% Similarity=0.178 Sum_probs=237.3
Q ss_pred cccccccCCceeEEEEEEeeccccc-eeeeeeeCCCCcEEEEccceee-------eeEeeeeccccCCcEEEEEEcCCCC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTM-AASLAHSRSSRTITKCSENLVR-------SYRVAKVFRENTDKINSLDYSSDGS 234 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~~l~~s~~~~~~i~~wd~~~~-------~~~~~~~~~~h~~~I~~l~~spd~~ 234 (515)
+...++++|...|.++.+....... ...+.++++.|+.+++|+ +. ...+...+.+|...|.+++|+|++.
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd--~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWK--LYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEE--ECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEE--CCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 4556788998778887772110000 111345888899999998 43 3466788999999999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe--cCCCCCeEE
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF--PGHVRKVSS 312 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~--~~h~~~v~~ 312 (515)
++++|+.|++|++||+.+++....+.+|...|.+++|+|++..+++++ .|++|++||+......... .+|...|.+
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG--AEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE--TTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc--CCCEEEEEeccCCceeeeecccCCCceeee
Confidence 999999999999999999999999999999999999999999887664 7999999999844332222 378999999
Q ss_pred EEEcCCC----------CEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCC
Q psy6127 313 LNLSPVD----------DSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 313 l~~~~~~----------~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
++|+|++ .+|++++.|++|++||. ..+....+ .+...+.+++|+|+|++|++|+.||.|++||++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999987 78999999999999994 44444444 456679999999999999999999999999995433
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE--Eeec--------cccCCCCCEEEEEecC
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ--SLSG--------VLNNNASPLEATFTPD 451 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~--~~~~--------~~~~~~~i~~~~~sp~ 451 (515)
.. ...+ .+...|.+++|+|++.+++++ .|+.+++||+.+++... .+.. ...+...+.+++|+|+
T Consensus 247 ~~-~~~~----~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 247 YP-QREF----DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp SC-SEEE----ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred cc-ceee----cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence 21 1111 133469999999999887655 57789999998876543 3331 1134556899999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCe
Q psy6127 452 SQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
|++|++|+.||.|++|+++++.
T Consensus 321 g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp SCCEEEEETTSEEEEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEEccC
Confidence 9999999999999999987653
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=344.13 Aligned_cols=288 Identities=19% Similarity=0.296 Sum_probs=245.8
Q ss_pred EeeeeccccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-----eeeeEecCCCCceeEEEEecCCCeEEEEEeeC
Q psy6127 212 RVAKVFRENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQG-----TSKNTINSKKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
+....+++|++.|++++|+|++ ++|+|||.|++|++||+.+. .....+.+|...|.+++|+|+++.+++++ .
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs--~ 450 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS--W 450 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE--T
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe--C
Confidence 4456789999999999999964 79999999999999998753 44567899999999999999999877654 7
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE----ecCCCeeEEEECCCC-
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI----QLSGNKPIAAYDPEG- 360 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~s~~~- 360 (515)
|++|++||+.+++....+.+|...|.+++|+|+++.|++|+.|++|++||.......... .+...+.+++|+|++
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 999999999999999999999999999999999999999999999999998755433332 234558999999987
Q ss_pred -CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccC
Q psy6127 361 -LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN 439 (515)
Q Consensus 361 -~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~ 439 (515)
..+++++.|++|++||++..+ .......|...|++++|+|++++|++++.|+.|++||+++++++..+..
T Consensus 531 ~~~l~s~s~d~~v~vwd~~~~~-----~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~---- 601 (694)
T 3dm0_A 531 QPTIVSASWDKTVKVWNLSNCK-----LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA---- 601 (694)
T ss_dssp SCEEEEEETTSCEEEEETTTCC-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC----
T ss_pred cceEEEEeCCCeEEEEECCCCc-----EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC----
Confidence 689999999999999998754 4444567888999999999999999999999999999999998877653
Q ss_pred CCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCC------------------CCCeEEEEECCCCCEEEEe
Q psy6127 440 NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDH------------------PSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 440 ~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h------------------~~~V~~l~~sp~~~~las~ 501 (515)
...+.+++|+|++.++++++ ++.|++||+.+++.+..+...+ ...+++++|+|+|++|++|
T Consensus 602 ~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sg 680 (694)
T 3dm0_A 602 NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSG 680 (694)
T ss_dssp SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEE
T ss_pred CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEE
Confidence 23489999999999888776 5569999999999888775311 1237899999999999999
Q ss_pred eCC--EEEEcCC
Q psy6127 502 CSN--MAFWIPT 511 (515)
Q Consensus 502 ~~d--v~iW~~~ 511 (515)
+.| +++|++.
T Consensus 681 s~Dg~i~iW~i~ 692 (694)
T 3dm0_A 681 YTDGVIRVWGIG 692 (694)
T ss_dssp ETTSEEEEEEC-
T ss_pred cCCCeEEEEecc
Confidence 866 9999985
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=309.19 Aligned_cols=291 Identities=19% Similarity=0.285 Sum_probs=249.4
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
....++.+|...+.++.+.+... +.++++.|+.+++|+ ....+....+.+|...|.+++|+|++++|++|+.|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~-----~l~s~~~dg~i~iw~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGE-----WLASSSADKLIKIWG--AYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEE--TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEEEEcccCCcEEEEEECCCCC-----EEEEeeCCCeEEEEe--CCCcccchhhccCCCceEEEEEcCCCCEEEEECCC
Confidence 44557788877788888877543 334677888999998 66778888999999999999999999999999999
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
+.|++||+.+++.+..+.+|...|.+++|+|+++.+++++ .|+.|++||+++++.+..+..|..+|.+++|+|++++|
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS--FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence 9999999999999999999999999999999998877654 79999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCCeEEEEe--cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc---C
Q psy6127 323 ISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC---E 397 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---~ 397 (515)
++++.||.|++||+++++.+..+. ....+..++|+|+++++++++.|+.|++||+++++ .......+.. .
T Consensus 165 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~ 239 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK-----CLKTYTGHKNEKYC 239 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE-----EEEEECSSCCSSSC
T ss_pred EEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc-----EEEEEEecCCceEE
Confidence 999999999999999999887763 33457889999999999999999999999998754 2222222222 2
Q ss_pred eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe--CCCcEEEEECC
Q psy6127 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS--TDGQVHIWNAE 470 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs--~dg~I~iwd~~ 470 (515)
+......+++.++++|+.||.|++||+.+++.+..+.+|.. .|.+++|+|+++++++++ .|+.|++|+.+
T Consensus 240 ~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~---~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 240 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD---VVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSS---CEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCC---cEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 32333446788999999999999999999999988887654 499999999999999987 69999999864
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=332.43 Aligned_cols=306 Identities=14% Similarity=0.203 Sum_probs=257.6
Q ss_pred CCCcEEEEccceeeeeE---eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeeeeEecCCCCceeE
Q psy6127 196 SSRTITKCSENLVRSYR---VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ----GTSKNTINSKKYGVDL 268 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~~---~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~----~~~~~~~~~~~~~v~~ 268 (515)
+.++.+++|+ +...+ +...+ .|...|++++|+|++++|++|+.||.|++||+.+ .+....+..|...|.+
T Consensus 42 ~~d~~v~iw~--~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~ 118 (416)
T 2pm9_A 42 STDSSLELWS--LLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKT 118 (416)
T ss_dssp CCCCCCEEEE--SSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCE
T ss_pred CCCCeEEEEE--ccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEE
Confidence 7788899998 55443 33333 6899999999999999999999999999999987 4578889999999999
Q ss_pred EEEecC-CCeEEEEEeeCCCeEEEEECCCCe------eeE---EecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcC
Q psy6127 269 IKFTHS-KTTAIHASTKVDATLRYLSLHDNK------YVR---YFPGHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLR 337 (515)
Q Consensus 269 ~~~~~~-~~~l~~~s~~~d~~v~vwd~~~~~------~~~---~~~~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~ 337 (515)
++|+|+ +..++++ +.|+.|++||+.+++ ... .+.+|...|.+++|+|+ +..+++++.|+.|++||++
T Consensus 119 ~~~~~~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 119 VKFNAKQDNVLASG--GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp EEECSSSTTBEEEE--CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEEcCCCCCEEEEE--cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 999998 6655544 479999999999886 332 34679999999999999 7899999999999999999
Q ss_pred CCCeEEEEec-------CCCeeEEEECCCC-CEEEEEECCC---cEEEEEeecCCCCCceeeecCC-CCCcCeEEEEEcC
Q psy6127 338 QPNNVGMIQL-------SGNKPIAAYDPEG-LAFAIGVNSD---SIKLYDVRSYDKGPFASFKCPG-ERGCEWTGLKFSP 405 (515)
Q Consensus 338 ~~~~~~~~~~-------~~~~~~~~~s~~~-~~l~~g~~dg---~i~i~d~~~~~~~~~~~~~~~~-~~~~~i~~l~~sp 405 (515)
+++.+..+.. ...+.+++|+|++ .++++++.++ .|++||++.... ...... .|...|.+++|+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~----~~~~~~~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT----PLQTLNQGHQKGILSLDWCH 272 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS----CSBCCCSCCSSCEEEEEECS
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC----CcEEeecCccCceeEEEeCC
Confidence 9998888855 4668999999997 6899999998 999999987531 233334 6788999999999
Q ss_pred -CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC-CEEEEEeCCCcEEEEECCCCeEEEEEc----
Q psy6127 406 -DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS-QFVASGSTDGQVHIWNAERGYKVCVLD---- 479 (515)
Q Consensus 406 -~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~sgs~dg~I~iwd~~~~~~~~~~~---- 479 (515)
++++|++++.|+.|++||+++++++..+..|.. .+.+++|+|++ .++++++.||.|++||+.+++......
T Consensus 273 ~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 349 (416)
T 2pm9_A 273 QDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN---WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETET 349 (416)
T ss_dssp SCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS---CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-----
T ss_pred CCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC---ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccc
Confidence 999999999999999999999999988887554 48999999999 899999999999999998765322110
Q ss_pred ------------------------------CCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 480 ------------------------------GDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 480 ------------------------------~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
..|..++++++|+|+|++|++++.+ ++||++...
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 350 KQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -----------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 0156788899999999999999854 999999865
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=318.38 Aligned_cols=297 Identities=15% Similarity=0.211 Sum_probs=242.9
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeeeeEec--CCCCceeEEEEec-CCCeEEEEEe
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQGTSKNTIN--SKKYGVDLIKFTH-SKTTAIHAST 283 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~s~ 283 (515)
...+++...+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.+++|+| ++..++++
T Consensus 60 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-- 137 (383)
T 3ei3_B 60 LKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS-- 137 (383)
T ss_dssp HTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE--
T ss_pred ccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE--
Confidence 34567777889999999999999999 999999999999999999888777765 6999999999999 45555544
Q ss_pred eCCCeEEEEECCCCeeeEEec---CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCC
Q psy6127 284 KVDATLRYLSLHDNKYVRYFP---GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPE 359 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~ 359 (515)
+.|+.|++||+.+ ..+..+. +|...|.+++|+|++++|++|+.|+.|++||++ ++.+..+ .+...+.+++|+|+
T Consensus 138 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 138 SIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp ETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSS
T ss_pred eCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCC
Confidence 4799999999986 4444443 345889999999999999999999999999994 5566665 45677999999999
Q ss_pred CC-EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 360 GL-AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 360 ~~-~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
++ ++++++.|+.|++||+++...... ..... .|...|.+++|+| ++++|++++.|+.|++||+++++....+..+.
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNS-YIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTC-EEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccc-eEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 99 999999999999999998542211 22222 4778999999999 99999999999999999999998877776543
Q ss_pred cC----C----------CCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC-CCCCeEEEEECCCCCEEEEee
Q psy6127 438 NN----N----------ASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-HPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 438 ~~----~----------~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~las~~ 502 (515)
.. . ..+..++|+|+|++ +|+.||.|++||+.+++++..+.+. |.+.+..++|+|++++|++++
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 21 1 12344566666666 6778999999999999999999863 456778889999999999987
Q ss_pred C-CEEEEcCCC
Q psy6127 503 S-NMAFWIPTL 512 (515)
Q Consensus 503 ~-dv~iW~~~~ 512 (515)
. .+++|+++.
T Consensus 372 d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 GFNILIWNRED 382 (383)
T ss_dssp TTEEEEEECC-
T ss_pred CCcEEEEecCC
Confidence 3 399999874
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=322.07 Aligned_cols=323 Identities=19% Similarity=0.240 Sum_probs=267.1
Q ss_pred ccccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 164 SLSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 164 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
...++.+|.. ++.++.+.+. +.++++.|+.+++|| ...++++..+.+|.+.|++++|+|++ +|++|+.|
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~~-------~l~sgs~dg~i~vwd--~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d 182 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFEDN-------YVITGADDKMIRVYD--SINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD 182 (464)
T ss_dssp EEEEEECCSSSCEEEEEEETT-------EEEEEETTSCEEEEE--TTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT
T ss_pred ceEEEcCCCCCcEEEEEECCC-------EEEEEcCCCcEEEEE--CCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC
Confidence 4457788855 4667777654 334788899999999 78889999999999999999999988 99999999
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee-----------------------
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY----------------------- 299 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~----------------------- 299 (515)
|+|++||+.+++....+.+|...|.+++|++..+.-.+++++.|+.|++||+.++..
T Consensus 183 g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 183 RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 999999999999999999999999999999643333333445899999999987652
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
...+.+|...|.++ +++++.+++|+.||.|++||+++++.+..+. +...+.+++|+|+++.+++|+.||.|++||++
T Consensus 263 ~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 263 VGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 55678899999887 5668999999999999999999999988884 55679999999999999999999999999998
Q ss_pred cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE
Q psy6127 379 SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG 458 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg 458 (515)
+++ .......|...|.+++|+ ++++++++.||.|++||+.++....... +...+..++|+|+++++++|
T Consensus 341 ~~~-----~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~ 409 (464)
T 3v7d_B 341 NGE-----LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILVSG 409 (464)
T ss_dssp TTE-----EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEEEE
T ss_pred CCc-----EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEEEe
Confidence 754 444556788899999997 5799999999999999999987665553 23337789999999999999
Q ss_pred eCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 459 STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 459 s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
+ ||.|++||+.+++++......|.+.|++++|++ ..++++++.+ +.+|.++
T Consensus 410 ~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~-~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 410 S-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp E-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEET-TEEEEEEEETTEEEEEEEE
T ss_pred c-CCeEEEEECCCCcEEehhhccCCCcEEEEEecC-CEEEEEEEeCCeEEEEEee
Confidence 8 899999999999999874445899999999983 3444444433 4444443
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=318.46 Aligned_cols=296 Identities=15% Similarity=0.191 Sum_probs=221.8
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCC------CcEEEEccceeeeeEe----eeeccccCCcE
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSS------RTITKCSENLVRSYRV----AKVFRENTDKI 224 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~------~~~i~~wd~~~~~~~~----~~~~~~h~~~I 224 (515)
..|+...... ..|...|.++.|.|.... |+ +++. |+.+++|+ ...... .....+|...|
T Consensus 29 ~~w~~p~~~p----~~H~~~V~~v~fSpDG~~----la-s~s~d~~~~wd~~v~~~~--~~~~~~~~~~~~~~~~~~~~V 97 (357)
T 4g56_B 29 SAWGRPVTAP----ACMEVQIGAVRYRRDGAL----LL-AASSLSSRTWGGSIWVFK--DPEGAPNESLCTAGVQTEAGV 97 (357)
T ss_dssp ---------------CCCSEEEEEEECSSSCE----EE-EEECSSSSSCCEEEEEES--SCC---CGGGCSEEEECSSCE
T ss_pred cccCCCCCCc----ccccCCEEEEEECCCCCE----EE-EEcCCCCccccCeEEEEE--CCCCCcceeEecccCCCCCCE
Confidence 7787754332 346555677777665432 33 4444 45566665 333332 23345799999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeee----EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 225 NSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN----TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 225 ~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
++++|+|+++ +++++.||+|+|||+.+++... ...+|...|.+++|+|+++.+++++ .|+.|++||+++++.+
T Consensus 98 ~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs--~dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 98 TDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG--KDFSVKVWDLSQKAVL 174 (357)
T ss_dssp EEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE--TTSCEEEEETTTTEEE
T ss_pred EEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEE
Confidence 9999999986 5567889999999998876543 3457899999999999999887664 7999999999999999
Q ss_pred EEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEe---cCCCeeEEEECCC-CCEEEEEECCCcEEEE
Q psy6127 301 RYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQ---LSGNKPIAAYDPE-GLAFAIGVNSDSIKLY 375 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~ 375 (515)
..+.+|...|.+++|+|++. .+++++.|++|++||+++++....+. ....+.+++|+|+ +.++++|+.|+.|++|
T Consensus 175 ~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 175 KSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp EEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred EEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 99999999999999999875 78999999999999999988776553 3345889999997 5689999999999999
Q ss_pred EeecCCCCCceeeecCCCCCcCeEEEEEcCCC-CEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec-CCC
Q psy6127 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDG-KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP-DSQ 453 (515)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~ 453 (515)
|+++++ .......+...|++++|+|++ ++|++++.|++|++||+++++.+..+ + |...|++++|+| +++
T Consensus 255 d~~~~~-----~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~---H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 255 NIKNPD-----SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-S---HRDFVTGVAWSPLDHS 325 (357)
T ss_dssp ESSCGG-----GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-C---CSSCEEEEEECSSSTT
T ss_pred ECCCCc-----EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-C---CCCCEEEEEEeCCCCC
Confidence 998754 333445778899999999987 57899999999999999999877654 3 445599999998 799
Q ss_pred EEEEEeCCCcEEEEECCCCe
Q psy6127 454 FVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~~~~ 473 (515)
+|++++.||+|++|++.+..
T Consensus 326 ~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEEEEETTSCEEEEECC---
T ss_pred EEEEEcCCCeEEEEECCCCC
Confidence 99999999999999997643
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=366.65 Aligned_cols=357 Identities=17% Similarity=0.238 Sum_probs=301.3
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
+++|+|+.++.| ++||..+++.+.++.+|...+.++.|.+... +.++++.|+.+++|| +.+++
T Consensus 628 ~~l~s~~~d~~i----------~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~-----~l~s~~~d~~v~vwd--~~~~~ 690 (1249)
T 3sfz_A 628 QRIASCGADKTL----------QVFKAETGEKLLDIKAHEDEVLCCAFSSDDS-----YIATCSADKKVKIWD--SATGK 690 (1249)
T ss_dssp SEEEEEETTSCE----------EEEETTTCCEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEE--TTTCC
T ss_pred CEEEEEeCCCeE----------EEEECCCCCEEEEeccCCCCEEEEEEecCCC-----EEEEEeCCCeEEEEE--CCCCc
Confidence 678888888988 9999999999999999988888888876543 334677889999999 78889
Q ss_pred eeeeccccCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 213 VAKVFRENTDKINSLDYSS--DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~sp--d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
++.++.+|...|.+++|+| ++.++++|+.||.|++||+.+++....+.+|...|.+++|+|+++.+++++ .||.|+
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s--~dg~v~ 768 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS--ADGTLR 768 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE--SSSEEE
T ss_pred eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE--CCCeEE
Confidence 9999999999999999999 556899999999999999999999999999999999999999999877665 799999
Q ss_pred EEECCCCeeeEEe-------------------------------------------------------cCCCCCeEEEEE
Q psy6127 291 YLSLHDNKYVRYF-------------------------------------------------------PGHVRKVSSLNL 315 (515)
Q Consensus 291 vwd~~~~~~~~~~-------------------------------------------------------~~h~~~v~~l~~ 315 (515)
+||+.+++....+ .+|...|.+++|
T Consensus 769 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~ 848 (1249)
T 3sfz_A 769 LWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF 848 (1249)
T ss_dssp EEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEE
T ss_pred EEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEE
Confidence 9998876543322 268889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc---------
Q psy6127 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF--------- 385 (515)
Q Consensus 316 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~--------- 385 (515)
+|+++.+++++.||.|++||+.++.....+ .+...+.+++|+|+++.+++++.||.+++||+........
T Consensus 849 sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 928 (1249)
T 3sfz_A 849 SPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDV 928 (1249)
T ss_dssp CSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeE
Confidence 999999999999999999999999888877 4556699999999999999999999999999764211000
Q ss_pred ------------------eeee-----cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCC
Q psy6127 386 ------------------ASFK-----CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 386 ------------------~~~~-----~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
.... ........+.+++|+|+++++++|+.+|.|++||+.+++....+.+|.. .
T Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~---~ 1005 (1249)
T 3sfz_A 929 VFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKK---A 1005 (1249)
T ss_dssp EEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSS---C
T ss_pred EEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCC---c
Confidence 0000 0011345688999999999999999999999999999998887776544 4
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-CCEEEEcCCCC
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-SNMAFWIPTLS 513 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~~~ 513 (515)
|.+++|+|+|+++++++.||.|++||+.+++..... . |...|.+++|+|++.+++.+. +.+++|++...
T Consensus 1006 v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ-A-HQETVKDFRLLQDSRLLSWSFDGTVKVWNVITG 1075 (1249)
T ss_dssp CCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB-C-CSSCEEEEEECSSSEEEEEESSSEEEEEETTTT
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe-c-CCCcEEEEEEcCCCcEEEEECCCcEEEEECCCC
Confidence 999999999999999999999999999999887533 4 999999999999876554443 44999998654
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=355.62 Aligned_cols=363 Identities=11% Similarity=0.120 Sum_probs=272.1
Q ss_pred hheeecccccccccccCCCCcCCCcchhhcccc-----------ccccCCceeEEEEEEeeccccceeeeeeeCCCCcEE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSL-----------SSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTIT 201 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i 201 (515)
++|++|+.+|.| ++||+.+++.. ..+.+|...|.+++|.+.... ..++++.++.+
T Consensus 111 ~~l~sgs~dg~V----------~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~----~l~~g~~dg~v 176 (902)
T 2oaj_A 111 DWMLIGLQNGSM----------IVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG----TVLISYEYVTL 176 (902)
T ss_dssp SEEEEEETTSCE----------EEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE----EEEEECSSCEE
T ss_pred CEEEEEcCCCcE----------EEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC----EEEEEeCCCcE
Confidence 688999999999 99999987753 445677666777888764321 22367788889
Q ss_pred EEccceeeeeEeeeecccc------------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE--e--
Q psy6127 202 KCSENLVRSYRVAKVFREN------------------TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT--I-- 259 (515)
Q Consensus 202 ~~wd~~~~~~~~~~~~~~h------------------~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~--~-- 259 (515)
+|| ++..++.+.+.+| ...|++++|+|||++||+|+.||+|++||+.+++++.. +
T Consensus 177 -lWd--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~ 253 (902)
T 2oaj_A 177 -TYS--LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFE 253 (902)
T ss_dssp -EEE--TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSC
T ss_pred -EEE--CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecc
Confidence 999 7777887777665 57899999999999999999999999999999887653 2
Q ss_pred -cC-------------CCCceeEEEEecC----CCeEEEEEe--------------------------------------
Q psy6127 260 -NS-------------KKYGVDLIKFTHS----KTTAIHAST-------------------------------------- 283 (515)
Q Consensus 260 -~~-------------~~~~v~~~~~~~~----~~~l~~~s~-------------------------------------- 283 (515)
.. |..+|.+++|++. +..++++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 333 (902)
T 2oaj_A 254 TEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQ 333 (902)
T ss_dssp SCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSE
T ss_pred cccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccc
Confidence 11 2447899999642 223322221
Q ss_pred -------------------------------------eCCCeEEEEECCCCeeeEE------------------------
Q psy6127 284 -------------------------------------KVDATLRYLSLHDNKYVRY------------------------ 302 (515)
Q Consensus 284 -------------------------------------~~d~~v~vwd~~~~~~~~~------------------------ 302 (515)
+.|+.|++||+.++.....
T Consensus 334 ~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~ 413 (902)
T 2oaj_A 334 MKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVP 413 (902)
T ss_dssp EEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEE
T ss_pred eEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcC
Confidence 1235566666655532211
Q ss_pred -----------------ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE----EEE--------ecCCCeeE
Q psy6127 303 -----------------FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV----GMI--------QLSGNKPI 353 (515)
Q Consensus 303 -----------------~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~----~~~--------~~~~~~~~ 353 (515)
+.+|...+.+++|+|+++.|++|+.|++|++||+.++... ... .+...+.+
T Consensus 414 ~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~s 493 (902)
T 2oaj_A 414 NKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDK 493 (902)
T ss_dssp HHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEE
T ss_pred HHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeE
Confidence 1233334444556788999999999999999999887431 111 23456999
Q ss_pred EEECCCCCEEEEEECCCcEEEEEeecCCCCC----------------------------------------ceeeecCCC
Q psy6127 354 AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGP----------------------------------------FASFKCPGE 393 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~----------------------------------------~~~~~~~~~ 393 (515)
++|+|++++||+|+.||+|++||+.+.+... .........
T Consensus 494 vafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 573 (902)
T 2oaj_A 494 ISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA 573 (902)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC
T ss_pred EEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc
Confidence 9999999999999999999999998753100 012334456
Q ss_pred CCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE--eeccc-cCCCCCEEEEEe-----cCC---CEEEEEeCCC
Q psy6127 394 RGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS--LSGVL-NNNASPLEATFT-----PDS---QFVASGSTDG 462 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~--~~~~~-~~~~~i~~~~~s-----p~g---~~l~sgs~dg 462 (515)
|...|++++|+|+| +||+|+.|++|++||++++..+.. +..+. .+...|++++|+ ||| ++|++|+.|+
T Consensus 574 h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~ 652 (902)
T 2oaj_A 574 NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMG 652 (902)
T ss_dssp CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTS
T ss_pred CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCC
Confidence 88999999999999 999999999999999988776542 22332 566779999999 886 8999999999
Q ss_pred cEEEEEC---CCCeEEEEEcC----CCCCCeEEEE-EC----------------------CCCCEEEEeeCCEEEEcCCC
Q psy6127 463 QVHIWNA---ERGYKVCVLDG----DHPSAVQSLQ-FN----------------------PKYHMLASACSNMAFWIPTL 512 (515)
Q Consensus 463 ~I~iwd~---~~~~~~~~~~~----~h~~~V~~l~-~s----------------------p~~~~las~~~dv~iW~~~~ 512 (515)
+|++||+ .+|+....+.+ .|.++|.+++ |+ +++.+|+++..++|||++..
T Consensus 653 tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~ 732 (902)
T 2oaj_A 653 EVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGK 732 (902)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTC
T ss_pred cEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEeccceEEEeCcc
Confidence 9999999 78888888766 1357888777 66 67888888878899999975
Q ss_pred C
Q psy6127 513 S 513 (515)
Q Consensus 513 ~ 513 (515)
.
T Consensus 733 ~ 733 (902)
T 2oaj_A 733 S 733 (902)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=302.25 Aligned_cols=286 Identities=18% Similarity=0.246 Sum_probs=247.0
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
..+++.+++.+|.+.|++++| |++++|++|+.||.|++||+.+++....+..|...|.+++|+|++..+++++ .|+.
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~ 82 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG--KDTM 82 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE--TTSC
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec--CCCe
Confidence 346788899999999999999 9999999999999999999999999999999999999999999999887765 7999
Q ss_pred EEEEECCCC---eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECC-CCCEE
Q psy6127 289 LRYLSLHDN---KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDP-EGLAF 363 (515)
Q Consensus 289 v~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~-~~~~l 363 (515)
+++|++... +.+..+.+|...|.+++| +++.+++++.|+.|++|| .++....+ .+...+.++++.| +++.+
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 999998654 567788899999999999 478999999999999999 55555555 4556688899888 99999
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCC
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP 443 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 443 (515)
++++.||.+++||... ........+...+.+++|+|++. +++++.|+.|++||+++++.+..+..|.. .+
T Consensus 159 ~~~~~d~~i~i~d~~~------~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~i 228 (313)
T 3odt_A 159 LTASADKTIKLWQNDK------VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHES---FV 228 (313)
T ss_dssp EEEETTSCEEEEETTE------EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSS---CE
T ss_pred EEEECCCCEEEEecCc------eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCc---eE
Confidence 9999999999999433 12222344788999999999998 89999999999999999999988876544 49
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-CCEEEEcCCCC
Q psy6127 444 LEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-SNMAFWIPTLS 513 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~~~ 513 (515)
.+++|+|++ .+++++.||.|++||+.+++++..+.. |...|++++|+|++++++++. +.+++|+++..
T Consensus 229 ~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 229 YCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL-PAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC-SSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred EEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec-cCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 999999999 588999999999999999999999988 889999999999999655333 34999998753
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=327.16 Aligned_cols=299 Identities=19% Similarity=0.256 Sum_probs=238.1
Q ss_pred eEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeee--eEecCCCCceeEEEEec-CCCeEEEEEeeCC
Q psy6127 211 YRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSK--NTINSKKYGVDLIKFTH-SKTTAIHASTKVD 286 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~s~~~d 286 (515)
++......+|...|+|++|+| ++++||+|+.||+|+|||+.+++.. ..+.+|...|.+++|+| ++..++++ +.|
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~--s~D 186 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS--SME 186 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEE--CSS
T ss_pred eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEE--eCC
Confidence 444556678999999999999 6679999999999999999877544 34568999999999998 45655544 589
Q ss_pred CeEEEEECCCCeeeEEecC--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCC-EE
Q psy6127 287 ATLRYLSLHDNKYVRYFPG--HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGL-AF 363 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~-~l 363 (515)
++|++||++++........ +...+.+++|+|++++|++|+.||.|++||++.........+...+.+++|+|++. ++
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEE
Confidence 9999999987765444433 34567899999999999999999999999997654333334566799999999876 78
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC---
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN--- 440 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~--- 440 (515)
++|+.|+.|++||++..... ..+.....|...|++++|+|+|++|++++.|+.|++||+.++++...+..+....
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~--~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGK--ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EEEETTSBCCEEETTTCCSS--SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSS
T ss_pred EEecCcceeeEEeccccccc--ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccc
Confidence 89999999999999875432 1223345678899999999999999999999999999999998887776554321
Q ss_pred CCCEEEEEecCCCEEEEEe------------CCCcEEEEECCCCeEEEEEcCCCCCCeEEE-EECCCCCEEEEeeCC-EE
Q psy6127 441 ASPLEATFTPDSQFVASGS------------TDGQVHIWNAERGYKVCVLDGDHPSAVQSL-QFNPKYHMLASACSN-MA 506 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs------------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l-~~sp~~~~las~~~d-v~ 506 (515)
..+....|+|++.++++++ .++.|++||..+++.+..+...|...|.++ +|+|+|.+||+|+++ ++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~ 424 (435)
T 4e54_B 345 LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHIL 424 (435)
T ss_dssp SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEE
T ss_pred ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEE
Confidence 1234567777777776664 335799999999999999876688899987 699999999998754 99
Q ss_pred EEcCCCC
Q psy6127 507 FWIPTLS 513 (515)
Q Consensus 507 iW~~~~~ 513 (515)
||+++.+
T Consensus 425 iW~~~~g 431 (435)
T 4e54_B 425 IWSQQEA 431 (435)
T ss_dssp ECCCC--
T ss_pred EEECCcC
Confidence 9998764
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=310.68 Aligned_cols=289 Identities=15% Similarity=0.204 Sum_probs=244.2
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
+..|.++|++++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|+++.+++++ .|+.|++||+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~--~dg~i~vwd~ 81 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG--TDRNAYVWTL 81 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE--TTSCEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc--CCCeEEEEEC
Confidence 45699999999999999999999999999999999887 8889999999999999999999887665 7999999999
Q ss_pred CCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe---EEEE--ecCCCeeEEEECCCCCEEEEEE
Q psy6127 295 HDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN---VGMI--QLSGNKPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 295 ~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~--~~~~~~~~~~~s~~~~~l~~g~ 367 (515)
++++.... +..|...|.+++|+|++++|++++.|+.|++||++.++. ...+ .+...+.+++|+|+++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 98875443 467999999999999999999999999999999998873 2333 3456799999999999999999
Q ss_pred CCCcEEEEEeecCCC-------------CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 368 NSDSIKLYDVRSYDK-------------GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~-------------~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
.||.|++||++.... ...........|...+.+++|+|++++|++++.|+.|++||+++++++..+.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 999999999753210 0112334445778899999999999999999999999999999999998888
Q ss_pred ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC--CeE--------------------------------E-----
Q psy6127 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER--GYK--------------------------------V----- 475 (515)
Q Consensus 435 ~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~--~~~--------------------------------~----- 475 (515)
.+. ..+.+++|+|+++++++| .|+.|++|++.+ ++. .
T Consensus 242 ~~~---~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (372)
T 1k8k_C 242 SET---LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 317 (372)
T ss_dssp CSS---CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred cCC---CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence 654 349999999999988888 899999999987 431 1
Q ss_pred -EEEcCCCCCCeEEEEEC-CCC---CEEEEeeCC--EEEEcCC
Q psy6127 476 -CVLDGDHPSAVQSLQFN-PKY---HMLASACSN--MAFWIPT 511 (515)
Q Consensus 476 -~~~~~~h~~~V~~l~~s-p~~---~~las~~~d--v~iW~~~ 511 (515)
..+...|.++|++++|+ ++| .+|++++.| +++|+++
T Consensus 318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 23332499999999977 576 999999866 9999975
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=303.51 Aligned_cols=295 Identities=18% Similarity=0.261 Sum_probs=249.8
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE---eeeecc--ccCCcEEEEEE
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR---VAKVFR--ENTDKINSLDY 229 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~---~~~~~~--~h~~~I~~l~~ 229 (515)
..|+...........+|...+.++.+.+.... ++ +++ ++.+++|+ +...+ ....+. +|...|.+++|
T Consensus 34 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~----l~-~~~-dg~i~iw~--~~~~~~~~~~~~~~~~~~~~~v~~~~~ 105 (337)
T 1gxr_A 34 IGPGIPRHARQINTLNHGEVVCAVTISNPTRH----VY-TGG-KGCVKVWD--ISHPGNKSPVSQLDCLNRDNYIRSCKL 105 (337)
T ss_dssp SSTTCCSEEEEEEEECCSSCCCEEEECSSSSE----EE-EEC-BSEEEEEE--TTSTTCCSCSEEEECSCTTSBEEEEEE
T ss_pred eccccCCccccceeccCCCceEEEEEecCCcE----EE-EcC-CCeEEEEE--CCCCCceeeeecccccCCCCcEEEEEE
Confidence 66766655544444567666777777655431 33 444 88999998 43332 223333 89999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCe--eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC
Q psy6127 230 SSDGSLLISCSDDDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV 307 (515)
Q Consensus 230 spd~~~lasgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~ 307 (515)
+|++++|++++.||.|++||+.+++ ....+..|...+.+++|+|+++.+++++ .|+.|++||+++++.+..+.+|.
T Consensus 106 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~v~~~d~~~~~~~~~~~~~~ 183 (337)
T 1gxr_A 106 LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHT 183 (337)
T ss_dssp CTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCS
T ss_pred cCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe--CCCcEEEEeCCCCceeeeeeccc
Confidence 9999999999999999999999877 6677888999999999999998887665 79999999999999999999999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCcee
Q psy6127 308 RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFAS 387 (515)
Q Consensus 308 ~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 387 (515)
..|.+++|+|+++.|++++.||.|++||+++++....+.+...+.+++|+|+++.+++++.++.+++||++..+ .
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-----~ 258 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-----K 258 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-----E
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-----e
Confidence 99999999999999999999999999999999999988888889999999999999999999999999998754 2
Q ss_pred eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 388 FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 388 ~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
. ....|...+.+++|+|+++++++++.||.|++||+.+++.+.... +...+.+++|+|++++|++++.||.|++|
T Consensus 259 ~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 259 Y-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp E-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred E-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec----CCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 2 234677889999999999999999999999999999998875543 34459999999999999999999999999
Q ss_pred EC
Q psy6127 468 NA 469 (515)
Q Consensus 468 d~ 469 (515)
++
T Consensus 334 ~~ 335 (337)
T 1gxr_A 334 EV 335 (337)
T ss_dssp EE
T ss_pred EE
Confidence 96
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=316.99 Aligned_cols=300 Identities=14% Similarity=0.182 Sum_probs=245.0
Q ss_pred CCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEC----CCCe------eeeEecC---
Q psy6127 196 SSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDC----EQGT------SKNTINS--- 261 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~----~~~~------~~~~~~~--- 261 (515)
....++..|+ .+..........|.+.|++++|+|+++ +||+|+.||.|++||+ .+++ ....+..
T Consensus 22 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (425)
T 1r5m_A 22 DTNSIDSSDD--LDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFA 99 (425)
T ss_dssp --------------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCC
T ss_pred cccccccccc--chhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccc
Confidence 3344455666 333333333445679999999999999 9999999999999999 8887 4555544
Q ss_pred -------CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy6127 262 -------KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334 (515)
Q Consensus 262 -------~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw 334 (515)
|...|.+++|+|+++.+++++ .|+.|++|| .+++.+..+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 100 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 176 (425)
T 1r5m_A 100 LSASSGKTTNQVTCLAWSHDGNSIVTGV--ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILW 176 (425)
T ss_dssp CC------CBCEEEEEECTTSSEEEEEE--TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred ccccccCCCCceEEEEEcCCCCEEEEEe--CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEE
Confidence 677999999999999887665 799999999 6788889999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEecCCC----------------eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCe
Q psy6127 335 DLRQPNNVGMIQLSGN----------------KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398 (515)
Q Consensus 335 d~~~~~~~~~~~~~~~----------------~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (515)
|+++++.+..+..+.. +.+++|+|++ .+++++.+|.|++||++... .......|...+
T Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~-----~~~~~~~~~~~i 250 (425)
T 1r5m_A 177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKT-----PTGKLIGHHGPI 250 (425)
T ss_dssp ETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSS-----CSEEECCCSSCE
T ss_pred ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCc-----eeeeeccCCCce
Confidence 9999998888754433 7788999875 58888999999999998754 222334677899
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 399 ~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
.+++|+|+++++++++.|+.|++||+++++....+..+. ..+.+++|+|++ ++++++.||.|++||+.+++.+..+
T Consensus 251 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHS---QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCS---SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCC---ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 999999999999999999999999999998888887644 449999999999 9999999999999999999999999
Q ss_pred cCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 479 DGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 479 ~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
.. |...|++++|+|++.++++++.+ +++|++.
T Consensus 327 ~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 327 IV-DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EC-TTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred cc-CCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 87 99999999999999999999854 9999975
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=312.45 Aligned_cols=288 Identities=16% Similarity=0.264 Sum_probs=239.3
Q ss_pred eccccCCcEEEEEEcCC----CCEEEEEeCCCeEEEEECCCCeeeeEecC-----CCCceeEEEEecCCC----eEEEEE
Q psy6127 216 VFRENTDKINSLDYSSD----GSLLISCSDDDQIIIYDCEQGTSKNTINS-----KKYGVDLIKFTHSKT----TAIHAS 282 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd----~~~lasgs~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~----~l~~~s 282 (515)
...+|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|++. .++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~- 91 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA- 91 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE-
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe-
Confidence 34589999999999984 45566666677999999998877766653 557899999999943 44443
Q ss_pred eeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCeEEEE----ecCCCeeEEEEC
Q psy6127 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP-VDDSFISGSYDKTVRVWDLRQPNNVGMI----QLSGNKPIAAYD 357 (515)
Q Consensus 283 ~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~s 357 (515)
+.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+ .+...+.+++|+
T Consensus 92 -~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 92 -GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp -ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred -cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 5899999999999999999999999999999999 8999999999999999999999988887 456779999999
Q ss_pred CCCCEEEEEECCCcEEEEEeecCCCCCc-----------------------eeeecCCCCCcCeEEEEEcCCCCEEEEEE
Q psy6127 358 PEGLAFAIGVNSDSIKLYDVRSYDKGPF-----------------------ASFKCPGERGCEWTGLKFSPDGKLILVST 414 (515)
Q Consensus 358 ~~~~~l~~g~~dg~i~i~d~~~~~~~~~-----------------------~~~~~~~~~~~~i~~l~~sp~~~~l~~~s 414 (515)
|+++++++++.||.|++||+++.+.... ........|...|.+++|+ ++++++++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~ 248 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS 248 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe
Confidence 9999999999999999999986421000 0011123377889999998 67999999
Q ss_pred CCCcEEEEECCCCce--------------eEEeeccccCCCCCEEEEEecC--CCEEEEEeCCCcEEEEECCCCe----E
Q psy6127 415 NGSIIRLFDAFNGNC--------------VQSLSGVLNNNASPLEATFTPD--SQFVASGSTDGQVHIWNAERGY----K 474 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~--------------~~~~~~~~~~~~~i~~~~~sp~--g~~l~sgs~dg~I~iwd~~~~~----~ 474 (515)
.|+.|++||+.++.. +..+.. +...+.+++|+|+ +++|++|+.||.|++||+.+++ .
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY---SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC---SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccc---cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc
Confidence 999999999987754 444544 4445899999999 9999999999999999999875 4
Q ss_pred EEEEcCCC--CCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 475 VCVLDGDH--PSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 475 ~~~~~~~h--~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
...+.. | ...|++++|+|++++|++++.| +++|++.
T Consensus 326 ~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 326 CTTLTH-HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEECC-TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ceEEcc-cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 456766 6 7999999999999999999866 9999975
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=313.64 Aligned_cols=289 Identities=19% Similarity=0.241 Sum_probs=236.0
Q ss_pred CCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCC------------------cEEEEEEcC
Q psy6127 170 SPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTD------------------KINSLDYSS 231 (515)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~------------------~I~~l~~sp 231 (515)
+|...|.++.|.+.... ++ +++ +..+++|+ +..++.+..+.+|.. .|.+++|+|
T Consensus 62 ~h~~~V~~v~fspdg~~----la-~g~-~~~v~i~~--~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~ 133 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEY----LA-TGC-NKTTQVYR--VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 133 (393)
T ss_dssp ECSSCCCEEEECTTSSE----EE-EEC-BSCEEEEE--TTTCCEEEEECC-----------------CCCCBEEEEEECT
T ss_pred CCCCEEEEEEECCCCCE----EE-EEc-CCcEEEEE--ecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC
Confidence 36555666666654331 33 333 35688898 666777777766542 499999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS 311 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~ 311 (515)
||++||+|+.|++|++||+.+++....+.+|...|.+++|+|++..+++++ .|++|++||+++++....+. +...+.
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~-~~~~v~ 210 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS--GDRTVRIWDLRTGQCSLTLS-IEDGVT 210 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec--CCCcEEEEECCCCeeEEEEE-cCCCcE
Confidence 999999999999999999999999999999999999999999999877654 79999999999999888776 567899
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEEcCCCCeEEEE--------ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCC
Q psy6127 312 SLNLSP-VDDSFISGSYDKTVRVWDLRQPNNVGMI--------QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDK 382 (515)
Q Consensus 312 ~l~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~--------~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~ 382 (515)
+++|+| ++++|++|+.|+.|++||+++++.+..+ .+...+.+++|+|+++++++|+.|+.|++||++....
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN 290 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCC
Confidence 999999 8999999999999999999999887766 2445689999999999999999999999999986432
Q ss_pred CC-------ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec-----
Q psy6127 383 GP-------FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP----- 450 (515)
Q Consensus 383 ~~-------~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp----- 450 (515)
.. .........|...|.+++|+|++.+|++|+.|+.|++||..+++++..+.+|.. .|.+++|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~---~v~~v~~~~~~~~~ 367 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN---SVISVAVANGSSLG 367 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS---CEEEEEECSSCTTC
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC---CEEEEEecCCcCcC
Confidence 11 011222346778899999999999999999999999999999999988887654 499999886
Q ss_pred -CCCEEEEEeCCCcEEEEECCCC
Q psy6127 451 -DSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 451 -~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
++++|++|+.||+|++|++...
T Consensus 368 p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 368 PEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCCEEEEECCCCcEEECccccc
Confidence 6889999999999999998643
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=312.06 Aligned_cols=290 Identities=16% Similarity=0.221 Sum_probs=238.4
Q ss_pred eeccccCCcEEEEEEcCCCCEE-EEEeC---CCeEEEEECCCCeeeeEe-cCCCCceeEEEEecC---CCeEEEEEeeCC
Q psy6127 215 KVFRENTDKINSLDYSSDGSLL-ISCSD---DDQIIIYDCEQGTSKNTI-NSKKYGVDLIKFTHS---KTTAIHASTKVD 286 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~l-asgs~---dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~s~~~d 286 (515)
+.+++|.+.|.+++|+|+++.+ ++|+. ||.|++||+.+++..... ..|...|.+++|+|+ +..+++++ .|
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--~d 89 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD--FG 89 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE--TT
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec--CC
Confidence 4567899999999999999655 56655 899999999988765443 378899999999998 57666554 79
Q ss_pred CeEEEEECCCCe-eeEEecCCCCCeEEEEE------cCCCCEEEEEeCCCcEEEEEcCCCC-eEEEEecC-----CCeeE
Q psy6127 287 ATLRYLSLHDNK-YVRYFPGHVRKVSSLNL------SPVDDSFISGSYDKTVRVWDLRQPN-NVGMIQLS-----GNKPI 353 (515)
Q Consensus 287 ~~v~vwd~~~~~-~~~~~~~h~~~v~~l~~------~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~-----~~~~~ 353 (515)
+.|++||+.+++ .+..+.+|...|.+++| +|+++.|++++.||.|++||+++++ ....+... ..+.+
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 999999999988 88899999999999955 6789999999999999999999987 56666332 25777
Q ss_pred EE----ECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC---CCCEEEEEECCCcEEEEECCC
Q psy6127 354 AA----YDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP---DGKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 354 ~~----~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp---~~~~l~~~s~dg~i~iwd~~~ 426 (515)
++ |+|+++++++++.||.|++||+++.+ . .....+...+.+++|+| +++++++++.||.|++||+++
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-----L-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTE-----E-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCc-----e-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 77 78999999999999999999998754 1 22234567899999999 999999999999999999988
Q ss_pred CceeEEee--ccccCCCCCEEEEEecCCC-EEEEEeCCCcEEEEECCCC-------------------eEEEEEcCCCCC
Q psy6127 427 GNCVQSLS--GVLNNNASPLEATFTPDSQ-FVASGSTDGQVHIWNAERG-------------------YKVCVLDGDHPS 484 (515)
Q Consensus 427 ~~~~~~~~--~~~~~~~~i~~~~~sp~g~-~l~sgs~dg~I~iwd~~~~-------------------~~~~~~~~~h~~ 484 (515)
++....+. ....+...+.+++|+|+++ ++++++.||.|++||+.++ +++..+.+ |.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~ 322 (357)
T 3i2n_A 244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-STQ 322 (357)
T ss_dssp EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-CSS
T ss_pred CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc-CCC
Confidence 76655544 1123455699999999998 8999999999999998754 46777777 999
Q ss_pred CeEEEEECCCCCEEE-EeeCC--EEEEcCCCC
Q psy6127 485 AVQSLQFNPKYHMLA-SACSN--MAFWIPTLS 513 (515)
Q Consensus 485 ~V~~l~~sp~~~~la-s~~~d--v~iW~~~~~ 513 (515)
+|++++|+|++++++ +++.| +++|++...
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999999999999998 67754 999998753
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=337.00 Aligned_cols=291 Identities=20% Similarity=0.315 Sum_probs=258.5
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
+..+.+.+|.+.|++++|+|++++||+|+.||.|++||+.+++.+..+.+|..+|.+++|+|+++.+++++ .|+.|++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~v 81 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS--DDFRIRV 81 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE--TTSEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe--CCCeEEE
Confidence 45677899999999999999999999999999999999999999999999999999999999999887765 6999999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-CeEEEE-ecCCCeeEEEECC-CCCEEEEEEC
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP-NNVGMI-QLSGNKPIAAYDP-EGLAFAIGVN 368 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~-~~~~~~~~~~~s~-~~~~l~~g~~ 368 (515)
||+.+++.+..+.+|.+.|++++|+|++++|++++.||.|++||++++ .....+ .+...+.+++|+| +++.+++++.
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999987 444555 4556799999999 8999999999
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC--CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEE
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 446 (515)
||.|++||++.... .......+...+..++|+| ++.++++++.||.|++||+.+++.+..+..|.. .+.++
T Consensus 162 dg~v~vwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~---~v~~~ 234 (814)
T 3mkq_A 162 DRTVKVWSLGQSTP----NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS---NVSFA 234 (814)
T ss_dssp TSEEEEEETTCSSC----SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS---CEEEE
T ss_pred CCeEEEEECCCCcc----eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC---CEEEE
Confidence 99999999976542 2222344557788999999 999999999999999999999999888876544 49999
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC--EEEEeeCC-EEEEcCCC
Q psy6127 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH--MLASACSN-MAFWIPTL 512 (515)
Q Consensus 447 ~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~--~las~~~d-v~iW~~~~ 512 (515)
+|+|+++++++++.||.|++||+.+++.+..+.. |...|++++|+|++. ++++++.+ +.+|++..
T Consensus 235 ~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 235 VFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-GLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCSEEEEECC-SSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec-CCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 9999999999999999999999999999999988 889999999999987 56666544 88888654
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=313.36 Aligned_cols=289 Identities=16% Similarity=0.304 Sum_probs=232.7
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----------eeeEecCCC------------CceeEEEEecCC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-----------SKNTINSKK------------YGVDLIKFTHSK 275 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 275 (515)
.|.+.|++++|+|+|++||+|+.||.|++||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 368999999999999999999999999999999876 477888998 889999999998
Q ss_pred --CeEEEEEeeCCCeEEEEECCCCeee---------------------------------------EE-ecCCCCCeEEE
Q psy6127 276 --TTAIHASTKVDATLRYLSLHDNKYV---------------------------------------RY-FPGHVRKVSSL 313 (515)
Q Consensus 276 --~~l~~~s~~~d~~v~vwd~~~~~~~---------------------------------------~~-~~~h~~~v~~l 313 (515)
..++++ +.|+.|++||+.+++.. .. ..+|...|.++
T Consensus 106 ~~~~l~s~--s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 106 NAAQFLLS--TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SSSEEEEE--ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CcceEEEe--CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 556555 47999999999775432 12 36899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCC-CCeEEEE--------ecCCCeeEEEECCCC-CEEEEEECCCcEEEEEeecCCCC
Q psy6127 314 NLSPVDDSFISGSYDKTVRVWDLRQ-PNNVGMI--------QLSGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKG 383 (515)
Q Consensus 314 ~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~--------~~~~~~~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~~ 383 (515)
+|+|++++|++| .|+.|++||+++ ++....+ .+...+.+++|+|++ +++++|+.||.|++||+++....
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 799999999994 4444433 345669999999998 99999999999999999886521
Q ss_pred CceeeecCCCCCc------------CeEEEEEcCCCCEEEEEECCCcEEEEECCC-CceeEEeeccccCCC---------
Q psy6127 384 PFASFKCPGERGC------------EWTGLKFSPDGKLILVSTNGSIIRLFDAFN-GNCVQSLSGVLNNNA--------- 441 (515)
Q Consensus 384 ~~~~~~~~~~~~~------------~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~--------- 441 (515)
.. .......+.. .|.+++|+|++++|++++. +.|++||+++ ++++..+..|.....
T Consensus 263 ~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 263 DR-HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp CT-TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred cc-eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 10 0122233333 8999999999999999999 9999999997 888888887654221
Q ss_pred ---CCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC-------------------------------CCCCCeE
Q psy6127 442 ---SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG-------------------------------DHPSAVQ 487 (515)
Q Consensus 442 ---~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------------------------------~h~~~V~ 487 (515)
.+..++|+|++++|++|+.||.|++||+.+++.+..... .+...|.
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 134499999999999999999999999999887642210 1345789
Q ss_pred EEEECCCCCEEEEeeCC-EEEEcCCC
Q psy6127 488 SLQFNPKYHMLASACSN-MAFWIPTL 512 (515)
Q Consensus 488 ~l~~sp~~~~las~~~d-v~iW~~~~ 512 (515)
.++|+|++.+||+++.+ +.+|.-+.
T Consensus 421 ~~~~~p~~~~la~~~~~~~~~~~~~~ 446 (447)
T 3dw8_B 421 HTAWHPKENIIAVATTNNLYIFQDKV 446 (447)
T ss_dssp EEEECSSSSEEEEECSSCEEEEECCC
T ss_pred EEEECCCCCEEEEEecceeeeecccc
Confidence 99999999999998865 88987543
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=313.80 Aligned_cols=314 Identities=15% Similarity=0.153 Sum_probs=256.1
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCcee-EEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFV-SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY 211 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~ 211 (515)
+.|+++..++.| ++||..+++....+..+... +..++++++. + ++++.++.+++|+ +...
T Consensus 69 ~~l~~~~~d~~v----------~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------l-~~~~~dg~i~iwd--~~~~ 129 (420)
T 3vl1_A 69 SHLYKARLDGHD----------FLFNTIIRDGSKMLKRADYTAVDTAKLQMRR------F-ILGTTEGDIKVLD--SNFN 129 (420)
T ss_dssp TTEEEEEETTEE----------EEEECCSEETTTTSCSCCEEEEEEECSSSCE------E-EEEETTSCEEEEC--TTSC
T ss_pred CeEEEEEcCCcE----------EEEEecccceeeEEecCCceEEEEEecCCCE------E-EEEECCCCEEEEe--CCCc
Confidence 678899999999 99999999998888887443 2233333332 3 3667788899999 7788
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
++...+.+|.+.|++++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++..+++++ .|+.|++
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~d~~v~i 207 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS--LDGTIRL 207 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE--TTSCEEE
T ss_pred ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc--CCCcEEE
Confidence 88899999999999999999999999999999999999999999999999999999999999999887654 7999999
Q ss_pred EECCCCeeeEEecC---CCCCeEEEE---------------------EcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-
Q psy6127 292 LSLHDNKYVRYFPG---HVRKVSSLN---------------------LSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ- 346 (515)
Q Consensus 292 wd~~~~~~~~~~~~---h~~~v~~l~---------------------~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~- 346 (515)
||+++++.+..+.. |...+.+++ |+|++++|++|+.||.|++||+++++....+.
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 99999999988875 444555554 57889999999999999999999999887774
Q ss_pred -cCCCeeEEEECCCCC-EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 347 -LSGNKPIAAYDPEGL-AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 347 -~~~~~~~~~~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
+...+.+++|+|++. ++++|+.||.|++||+++.... ...+ ..++...+.++.+ |++++|++++.|+.|++|++
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~-~~~~--~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP-VGEF--LINEGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC-SEEE--EESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc-hhhh--hccCCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 446699999999999 9999999999999999876421 1222 2346678888855 57789999999999999998
Q ss_pred CCCceeEEee------ccccCCCCCEEEEEecCCC---EEEEEeCCCcEEEEECCC
Q psy6127 425 FNGNCVQSLS------GVLNNNASPLEATFTPDSQ---FVASGSTDGQVHIWNAER 471 (515)
Q Consensus 425 ~~~~~~~~~~------~~~~~~~~i~~~~~sp~g~---~l~sgs~dg~I~iwd~~~ 471 (515)
........+. ....+...+.+++|+|+++ .+++++.+|.+.+|++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 364 SDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 8742221111 1122445599999999999 777778899999999865
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-38 Score=309.82 Aligned_cols=287 Identities=10% Similarity=0.106 Sum_probs=224.9
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCC-------eEEEEECCCCee----------eeEecCCCCceeEEEEecCCCeEEEEE-
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDD-------QIIIYDCEQGTS----------KNTINSKKYGVDLIKFTHSKTTAIHAS- 282 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg-------~i~iwd~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~s- 282 (515)
.-||++++|+||+++|++|+.|. .|++|++..+.. ...+..|...+.++++. ++.++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45899999999999999998643 599999876532 12456788888887765 44555432
Q ss_pred --------eeCCCeEEEEECCCCeee----EEe-----cCCCCCeEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCCeEE
Q psy6127 283 --------TKVDATLRYLSLHDNKYV----RYF-----PGHVRKVSSLNLSPVDDSFISG--SYDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 283 --------~~~d~~v~vwd~~~~~~~----~~~-----~~h~~~v~~l~~~~~~~~l~s~--s~dg~i~iwd~~~~~~~~ 343 (515)
++.|+.+++|++.+.... ... ..+...+.+++|+|||++++++ +.|++|++||+++++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 235888999998664321 111 2345679999999999987654 478999999999999999
Q ss_pred EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC----cE
Q psy6127 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS----II 419 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg----~i 419 (515)
.+.+...+.+++|+|+|+++++++. +.+.+|+..++.. ........|...+.+++|+|+++++++++.|+ .+
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~---~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSC---IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCE---EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EeCCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcc---eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 9988888999999999999999875 5566777665431 12233456788899999999999999999877 68
Q ss_pred EEEECCCCceeE-EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEE
Q psy6127 420 RLFDAFNGNCVQ-SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHML 498 (515)
Q Consensus 420 ~iwd~~~~~~~~-~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 498 (515)
+.|++..+.... .......+...|++++|+|||++||+|+.|++|+|||+.+++++..+...|.++|++++|+|||++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE
Confidence 889987765422 1122233455699999999999999999999999999999999998754499999999999999999
Q ss_pred EEeeCC--EEEEcCCCC
Q psy6127 499 ASACSN--MAFWIPTLS 513 (515)
Q Consensus 499 as~~~d--v~iW~~~~~ 513 (515)
|+++.| ++||+++..
T Consensus 328 aS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 328 ASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSEEEEEECCTT
T ss_pred EEEeCCCeEEEEEcCCC
Confidence 999966 999998643
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=297.13 Aligned_cols=302 Identities=19% Similarity=0.215 Sum_probs=249.9
Q ss_pred cchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceee-----eeEeeeeccccCCcEEEEEEcC
Q psy6127 157 WDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVR-----SYRVAKVFRENTDKINSLDYSS 231 (515)
Q Consensus 157 wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~-----~~~~~~~~~~h~~~I~~l~~sp 231 (515)
+..++.+...+|+||...|.+++|.|.... +.++++.|+.|++|+ +. ...+.+++++|...|.+++|+|
T Consensus 23 ~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~----~l~S~s~D~~i~vWd--~~~~~~~~~~~~~~l~~h~~~V~~~~~s~ 96 (340)
T 4aow_A 23 MMTEQMTLRGTLKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWK--LTRDETNYGIPQRALRGHSHFVSDVVISS 96 (340)
T ss_dssp ---CEEEEEEEECCCSSCEEEEEECTTCTT----EEEEEETTSCEEEEE--ECCSSSCSEEEEEEECCCSSCEEEEEECT
T ss_pred ccCCceEEEEEECCccCCEEEEEEeCCCCC----EEEEEcCCCeEEEEE--CCCCCcccceeeEEEeCCCCCEEEEEECC
Confidence 345556667789999888999998865322 344788899999998 43 2456788999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee-eEEecCCCCCe
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY-VRYFPGHVRKV 310 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~-~~~~~~h~~~v 310 (515)
++++|++|+.|+.|++|+............+...+....+++++..+++++ .|+.+++||...... .....+|...+
T Consensus 97 dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s--~d~~~~~~d~~~~~~~~~~~~~~~~~v 174 (340)
T 4aow_A 97 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS--RDKTIKLWNTLGVCKYTVQDESHSEWV 174 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSSSCSSCE
T ss_pred CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeec--CCCeEEEEEeCCCceEEEEeccccCcc
Confidence 999999999999999999999999988888999999999999999887664 799999999876654 34567899999
Q ss_pred EEEEEcCCC--CEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCcee
Q psy6127 311 SSLNLSPVD--DSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFAS 387 (515)
Q Consensus 311 ~~l~~~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 387 (515)
..++|++++ ..+++++.|+.|++||+++++....+. +...+.+++|+|++++|++|+.||.|++||+++.. .
T Consensus 175 ~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~-----~ 249 (340)
T 4aow_A 175 SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK-----H 249 (340)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-----E
T ss_pred cceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc-----e
Confidence 999999875 478999999999999999999888874 55679999999999999999999999999998753 2
Q ss_pred eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc------ccCCCCCEEEEEecCCCEEEEEeCC
Q psy6127 388 FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV------LNNNASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 388 ~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~------~~~~~~i~~~~~sp~g~~l~sgs~d 461 (515)
.... .+...+.+++|+|++.++ +++.|+.|++||++++..+..+... ..+...|++++|+|+|++|++|+.|
T Consensus 250 ~~~~-~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 250 LYTL-DGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp EEEE-ECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred eeee-cCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 2222 234578999999998655 5667899999999998877766532 2355669999999999999999999
Q ss_pred CcEEEEECCCCe
Q psy6127 462 GQVHIWNAERGY 473 (515)
Q Consensus 462 g~I~iwd~~~~~ 473 (515)
|.|+|||+.+|+
T Consensus 328 g~v~iW~~~tGt 339 (340)
T 4aow_A 328 NLVRVWQVTIGT 339 (340)
T ss_dssp SCEEEEEEEC--
T ss_pred CEEEEEeCCCcC
Confidence 999999999885
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=315.38 Aligned_cols=288 Identities=13% Similarity=0.164 Sum_probs=226.7
Q ss_pred eccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG--TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
.++.|.++|++++|+|++++||+|+.|+.|++||+.++ +....+.+|...|.+++|+|+++.+++++ .|+.|++||
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~d~~v~vwd 83 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS--QDRNAYVYE 83 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE--TTSSEEEC-
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe--CCCeEEEEE
Confidence 34557889999999999999999999999999999988 78888999999999999999998877665 799999999
Q ss_pred CCCCe---eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe---EEEEe--cCCCeeEEEECCCCCEEEE
Q psy6127 294 LHDNK---YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN---VGMIQ--LSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 294 ~~~~~---~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~--~~~~~~~~~~s~~~~~l~~ 365 (515)
+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++++. ...+. +...+.+++|+|+++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 99887 6777889999999999999999999999999999999998873 55554 5677999999999999999
Q ss_pred EECCCcEEEEEeecCCCCC-------------ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce---
Q psy6127 366 GVNSDSIKLYDVRSYDKGP-------------FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC--- 429 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~-------------~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~--- 429 (515)
++.|+.|++||++...... ....... .|...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 9999999999996432110 1122223 7888999999999999999999999999999999987
Q ss_pred -eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe-----------------------------------
Q psy6127 430 -VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY----------------------------------- 473 (515)
Q Consensus 430 -~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~----------------------------------- 473 (515)
+..+..| ...+.+++|+|++++|++|+.++.+ +|+...+.
T Consensus 243 ~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (377)
T 3dwl_C 243 ALITVKLS---QLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFT 318 (377)
T ss_dssp ECCCEECS---SSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------
T ss_pred eeEeecCC---CCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccc
Confidence 5566654 4459999999999999999866655 66654211
Q ss_pred ----EEE------------EEcCCCCCCeEEEEECCCC-C---EEEEeeCC--EEEEcC
Q psy6127 474 ----KVC------------VLDGDHPSAVQSLQFNPKY-H---MLASACSN--MAFWIP 510 (515)
Q Consensus 474 ----~~~------------~~~~~h~~~V~~l~~sp~~-~---~las~~~d--v~iW~~ 510 (515)
... .+...|.+.|+++++.+.. . .+++++.| +++|++
T Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 319 ALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000 0111389999999977643 3 58888865 999985
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=304.51 Aligned_cols=307 Identities=20% Similarity=0.280 Sum_probs=250.9
Q ss_pred EEEccceeeeeEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeeEec-------------CCCCce
Q psy6127 201 TKCSENLVRSYRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTIN-------------SKKYGV 266 (515)
Q Consensus 201 i~~wd~~~~~~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~~~~~-------------~~~~~v 266 (515)
+++|+ ....+....+++|.+.|++++|+| ++++||+|+.||.|++||+.+++....+. +|...|
T Consensus 25 ~~v~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 25 RRVLG--LELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp HHHHT--EEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred ceeec--cccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 66777 667777888999999999999999 99999999999999999999887665543 589999
Q ss_pred eEEEEec-CCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCCeE
Q psy6127 267 DLIKFTH-SKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD---DSFISGSYDKTVRVWDLRQPNNV 342 (515)
Q Consensus 267 ~~~~~~~-~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~---~~l~s~s~dg~i~iwd~~~~~~~ 342 (515)
.+++|+| ++..++++ +.|+.|++||+.+++....+. +...+.++.++|.+ .++++++.|+.|++||+++++.+
T Consensus 103 ~~~~~~~~~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSS--SFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp EEEEECTTCTTCEEEE--ETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred EEEEEccCCCcEEEEE--eCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 9999999 55555544 479999999999999888876 78889999999854 49999999999999999999988
Q ss_pred EEEe-cCCCeeEEEECCCCC-EEEEEECCCcEEEEEeecCCCCCce-----------eeecCCCCCcCeEEEEEcCCCCE
Q psy6127 343 GMIQ-LSGNKPIAAYDPEGL-AFAIGVNSDSIKLYDVRSYDKGPFA-----------SFKCPGERGCEWTGLKFSPDGKL 409 (515)
Q Consensus 343 ~~~~-~~~~~~~~~~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~-----------~~~~~~~~~~~i~~l~~sp~~~~ 409 (515)
..+. +...+.+++|+|++. .+++++.||.|++||++........ .......|...|.+++|+|++++
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 259 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH 259 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE
Confidence 8875 556799999999998 5899999999999999875421111 11112467789999999999999
Q ss_pred EEEEECCCcEEEEECCCCceeEEeeccccC--CCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeE
Q psy6127 410 ILVSTNGSIIRLFDAFNGNCVQSLSGVLNN--NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQ 487 (515)
Q Consensus 410 l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 487 (515)
+++++.|+.|++||+.+++.......+... ...+........+..+++++.|+.|++||+.+++++..+.+ |.+.|+
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~v~ 338 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG-HYKTVD 338 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC-CSSCEE
T ss_pred EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc-CCCeEE
Confidence 999999999999999998876554432211 11122222233445666777899999999999999999988 999999
Q ss_pred EEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 488 SLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 488 ~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
+++|+|++.+|++++.| +++|+++..
T Consensus 339 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 339 CCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred EEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 99999999999999855 999998764
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=329.60 Aligned_cols=306 Identities=10% Similarity=0.078 Sum_probs=226.6
Q ss_pred eeCCCCcEEEEccceeeeeEe----eeeccccCCcEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCee-------
Q psy6127 193 HSRSSRTITKCSENLVRSYRV----AKVFRENTDKINSLDYSSD------GSLLISCSDDDQIIIYDCEQGTS------- 255 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~----~~~~~~h~~~I~~l~~spd------~~~lasgs~dg~i~iwd~~~~~~------- 255 (515)
.+++.|+.|++|+ +...++ ..++.+|.+.|.+++|+|+ +.+||+|+.||+|++||+.+++.
T Consensus 177 aS~s~D~tI~iWd--~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 177 DKEKHSSCIQIFK--MNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -----CEEEEEEE--EETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred ccCCCCceEEEEE--ccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 4788999999998 554433 3457788999999999997 57999999999999999987642
Q ss_pred ----eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe-eeEEecCCCCCeEEE--EEcCCC-CEEEEEeC
Q psy6127 256 ----KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK-YVRYFPGHVRKVSSL--NLSPVD-DSFISGSY 327 (515)
Q Consensus 256 ----~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~-~~~~~~~h~~~v~~l--~~~~~~-~~l~s~s~ 327 (515)
...+.+|...|.+++|++++ .+ ++|+.||+|++||++++. +...+.+|...|.++ +|+|++ .+|++|+.
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~~-~l--asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSPT-TV--VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSSS-EE--EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred ecCceEEEEcCCCCEEEEEecCCC-eE--EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 24678899999999999864 44 444689999999998764 456688999999999 578887 89999999
Q ss_pred CCcEEEEEcCCCCeEEEEecC---CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEc
Q psy6127 328 DKTVRVWDLRQPNNVGMIQLS---GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFS 404 (515)
Q Consensus 328 dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~s 404 (515)
|++|++||++++++...+..+ ..+.+++|+|++..+++++.|++|++||++... .......|...|++++|+
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~-----~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF-----AVHPLVSRETTITAIGVS 406 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT-----CCEEEEECSSCEEEEECC
T ss_pred CCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc-----cceeeecCCCceEEEEeC
Confidence 999999999988776555322 237789999999999999999999999998754 222233588899999999
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeccc--cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC-CCeEEEEEcCC
Q psy6127 405 PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL--NNNASPLEATFTPDSQFVASGSTDGQVHIWNAE-RGYKVCVLDGD 481 (515)
Q Consensus 405 p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~-~~~~~~~~~~~ 481 (515)
|++++|++|+.|++|++||+..+ .+....... .....+..++|+|+|+.+. ...+ +.+|+.. ++.++..+.+
T Consensus 407 p~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~--~~~~~~~~~g~~~~~l~g- 481 (524)
T 2j04_B 407 RLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSS--YEVYPLTVNDVSKAKIDA- 481 (524)
T ss_dssp SSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECCC--CCCCC--------------
T ss_pred CCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccCC--ceecccccCCcceeeecC-
Confidence 99999999999999999998653 222111100 1112367899999998553 2222 3344433 5777888887
Q ss_pred CCCCeEEEEECCCCC---EEEEeeCC--EEEEcCCCC
Q psy6127 482 HPSAVQSLQFNPKYH---MLASACSN--MAFWIPTLS 513 (515)
Q Consensus 482 h~~~V~~l~~sp~~~---~las~~~d--v~iW~~~~~ 513 (515)
|...|++++|+|++. ++|+|+.+ ++||++...
T Consensus 482 h~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 482 HGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 999999999999854 89998864 999998753
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=317.22 Aligned_cols=295 Identities=12% Similarity=0.188 Sum_probs=241.8
Q ss_pred EccceeeeeEeeeec-cccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC---Ce---eeeEecCCCCceeEEEEecC
Q psy6127 203 CSENLVRSYRVAKVF-RENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQ---GT---SKNTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 203 ~wd~~~~~~~~~~~~-~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~---~~---~~~~~~~~~~~v~~~~~~~~ 274 (515)
.|+ ..++++..+ .+|.+.|++++|+| ++++||+|+.||+|++||+.+ +. ....+ .|...|.+++|+|+
T Consensus 47 ~w~---~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~ 122 (437)
T 3gre_A 47 MGN---LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPN 122 (437)
T ss_dssp GGG---CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTT
T ss_pred ccc---ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCC
Confidence 375 335777778 89999999999999 999999999999999999876 43 22333 48899999999999
Q ss_pred CCeEEEEEeeCCCeEEEEECC---CCeeeEEecC------------CCCCeEEEE--EcCCCCEEEEEeCCCcEEEEEcC
Q psy6127 275 KTTAIHASTKVDATLRYLSLH---DNKYVRYFPG------------HVRKVSSLN--LSPVDDSFISGSYDKTVRVWDLR 337 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~---~~~~~~~~~~------------h~~~v~~l~--~~~~~~~l~s~s~dg~i~iwd~~ 337 (515)
++.+++++ .|+.|++||++ +++....+.+ +...+.++. ++|+++.|++|+.|+.|++||++
T Consensus 123 ~~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 123 FDAFAVSS--KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp SSEEEEEE--TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCEEEEEe--CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 98877665 79999999995 4444433322 456677777 56789999999999999999999
Q ss_pred CCCeEEEEe---cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-CCCCCcCeEEEEEcC----CCCE
Q psy6127 338 QPNNVGMIQ---LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-PGERGCEWTGLKFSP----DGKL 409 (515)
Q Consensus 338 ~~~~~~~~~---~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp----~~~~ 409 (515)
+++.+..+. +...+.+++|+|+++++++|+.||.|++||++... .... ...+...|.+++|+| ++.+
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV-----LIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE-----EEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc-----EEEEEecCCCCceEEEEeccccCCCccE
Confidence 999998885 45779999999999999999999999999998743 3322 225667899996654 6789
Q ss_pred EEEEECCCcEEEEECCCCceeEEeecccc-----------------------CCCCCEEEEEecCCCEEEEEeCCCcEEE
Q psy6127 410 ILVSTNGSIIRLFDAFNGNCVQSLSGVLN-----------------------NNASPLEATFTPDSQFVASGSTDGQVHI 466 (515)
Q Consensus 410 l~~~s~dg~i~iwd~~~~~~~~~~~~~~~-----------------------~~~~i~~~~~sp~g~~l~sgs~dg~I~i 466 (515)
+++++.|+.|++||+++++++..+.++.. +...|.+++|+ ++++|++|+.||.|++
T Consensus 276 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~ 354 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVM 354 (437)
T ss_dssp EEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEE
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEE
Confidence 99999999999999999999888875531 34458899999 7899999999999999
Q ss_pred EECCCCeEEEEEcCC------------------------------------CCCCeEEEEECCC--CCEEEEeeCC--EE
Q psy6127 467 WNAERGYKVCVLDGD------------------------------------HPSAVQSLQFNPK--YHMLASACSN--MA 506 (515)
Q Consensus 467 wd~~~~~~~~~~~~~------------------------------------h~~~V~~l~~sp~--~~~las~~~d--v~ 506 (515)
||+.++++...+.+. |.+.|++++|+++ +.+|++++.+ ++
T Consensus 355 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~ 434 (437)
T 3gre_A 355 FSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIG 434 (437)
T ss_dssp EETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEE
T ss_pred EECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEE
Confidence 999998776666542 8899999999998 7899999865 99
Q ss_pred EEc
Q psy6127 507 FWI 509 (515)
Q Consensus 507 iW~ 509 (515)
||+
T Consensus 435 iw~ 437 (437)
T 3gre_A 435 IFQ 437 (437)
T ss_dssp EEC
T ss_pred EeC
Confidence 995
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=301.21 Aligned_cols=281 Identities=14% Similarity=0.143 Sum_probs=243.4
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---eeeEecCCCCceeEEEEecCCC-eEEEEEeeCCCe
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT---SKNTINSKKYGVDLIKFTHSKT-TAIHASTKVDAT 288 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~~~d~~ 288 (515)
......+|.+.|++++|+|++++|++|+.||.|++||+.+++ ....+..|...|.+++|+|++. .+++++ .|+.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~ 80 (342)
T 1yfq_A 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT--VQGE 80 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE--TTSC
T ss_pred ceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc--CCCe
Confidence 345567999999999999999999999999999999998876 3455668999999999999998 777665 7999
Q ss_pred EEEEEC-CCCeeeEEecC--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC---------CCeEEEEecCCCeeEEEE
Q psy6127 289 LRYLSL-HDNKYVRYFPG--HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ---------PNNVGMIQLSGNKPIAAY 356 (515)
Q Consensus 289 v~vwd~-~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~ 356 (515)
|++||+ .+++. ..+.+ |...|.+++|+| ++.+++++.|+.|++||+++ ++++..+.+...+.+++|
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 999999 77755 67788 999999999999 99999999999999999988 776666677778999999
Q ss_pred CCCCCEEEEEECCCcEEEEEeec-CCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCC------c
Q psy6127 357 DPEGLAFAIGVNSDSIKLYDVRS-YDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNG------N 428 (515)
Q Consensus 357 s~~~~~l~~g~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~------~ 428 (515)
+|++ +++++.++.|++||++. ..... ......+...+.+++|+| +++++++++.||.+++|+++.. +
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLPLCEDDNG---TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESSCCTTCCC---EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred cCCc--EEEEeCCCeEEEEECCccccccc---eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 9988 99999999999999987 43221 112345667899999999 9999999999999999999887 7
Q ss_pred eeEEeecccc------CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCC-CCCeEEEEECCCCCEEEEe
Q psy6127 429 CVQSLSGVLN------NNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDH-PSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 429 ~~~~~~~~~~------~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~las~ 501 (515)
....+..+.. +...+.+++|+|++++|++++.||.|++||+.+++++..+.+ | .++|++++ |++.+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK-FNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-CSSSEEEEEE--ECSSEEEEE
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc-ccCCCceEec--CCCCeEEEE
Confidence 7777776643 234699999999999999999999999999999999999988 7 99999999 999999999
Q ss_pred eCCE
Q psy6127 502 CSNM 505 (515)
Q Consensus 502 ~~dv 505 (515)
+.|.
T Consensus 311 s~Dg 314 (342)
T 1yfq_A 311 TSDD 314 (342)
T ss_dssp EECT
T ss_pred ecCC
Confidence 8664
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=310.34 Aligned_cols=292 Identities=13% Similarity=0.141 Sum_probs=249.5
Q ss_pred cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE------eeeeccccCCcEEEEEEcCC----C-
Q psy6127 165 LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR------VAKVFRENTDKINSLDYSSD----G- 233 (515)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~------~~~~~~~h~~~I~~l~~spd----~- 233 (515)
...+.+|...+.++.+.+. +.++++.|+.+++|+ ....+ +...+.+|...|++++|+|+ +
T Consensus 9 ~~~~~~h~~~i~~~~~~~~-------~l~s~~~dg~i~iw~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACNS-------FTVSCSGDGYLKVWD--NKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 79 (397)
T ss_dssp EEESSCSSSCEEEEEECSS-------EEEEEETTSEEEEEE--SBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred hhhhhhhhcCeEEEEecCC-------eEEEEcCCCEEEEEE--CCCcccccCCCcceEEecCCCcEEEEEEecccccCCc
Confidence 4467788888999999873 344778899999999 66655 78888999999999999999 9
Q ss_pred --CEEEEEeCCCeEEEEECCCCee-----eeEecCC-----CCceeEEEEe----cCCCe-EEEEEeeCCCeEEEEECCC
Q psy6127 234 --SLLISCSDDDQIIIYDCEQGTS-----KNTINSK-----KYGVDLIKFT----HSKTT-AIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 234 --~~lasgs~dg~i~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~s~~~d~~v~vwd~~~ 296 (515)
++|++++.||.|++||+.+++. ...+..| ...|.+++|+ |+++. +++++ .|+.|++||+.+
T Consensus 80 ~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~ 157 (397)
T 1sq9_A 80 ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD--VKGTTYIWKFHP 157 (397)
T ss_dssp EEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE--TTSCEEEEEEES
T ss_pred cccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe--CCCcEEEEeCCc
Confidence 9999999999999999998887 8888888 5899999999 99988 66554 799999999998
Q ss_pred ------CeeeE-----Ee-------cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec-------CCCe
Q psy6127 297 ------NKYVR-----YF-------PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-------SGNK 351 (515)
Q Consensus 297 ------~~~~~-----~~-------~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-------~~~~ 351 (515)
++.+. .+ ..|...|.+++|+|++ .+++++.||.|++||+++++.+..+.. ...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc
Confidence 66665 66 4589999999999999 999999999999999999999888865 6779
Q ss_pred eEEEECCCCCEEEEEECC---CcEEEEEeecCCCCCceeeecCCC-------------CCcCeEEEEEcCCCCEEEEEEC
Q psy6127 352 PIAAYDPEGLAFAIGVNS---DSIKLYDVRSYDKGPFASFKCPGE-------------RGCEWTGLKFSPDGKLILVSTN 415 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~d---g~i~i~d~~~~~~~~~~~~~~~~~-------------~~~~i~~l~~sp~~~~l~~~s~ 415 (515)
.+++|+|++++|++++.| |.|++||+++.+ ....... |...|.+++|+|++++|++++.
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-----RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-----EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCCc-----ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 999999999999999999 999999998754 2222233 7889999999999999999999
Q ss_pred CCcEEEEECCCCceeEEee------cc------------ccCCCCCEEEEEecCC----------CEEEEEeCCCcEEEE
Q psy6127 416 GSIIRLFDAFNGNCVQSLS------GV------------LNNNASPLEATFTPDS----------QFVASGSTDGQVHIW 467 (515)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~------~~------------~~~~~~i~~~~~sp~g----------~~l~sgs~dg~I~iw 467 (515)
|+.|++||+++++.+..+. .+ ..+...|.+++|+|++ ++|++++.||.|++|
T Consensus 312 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 312 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence 9999999999999998888 44 0115569999999998 799999999999999
Q ss_pred ECCCCe
Q psy6127 468 NAERGY 473 (515)
Q Consensus 468 d~~~~~ 473 (515)
++.+|+
T Consensus 392 ~~~~g~ 397 (397)
T 1sq9_A 392 REAGGK 397 (397)
T ss_dssp EEEC--
T ss_pred EcCCCC
Confidence 998764
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=292.00 Aligned_cols=253 Identities=15% Similarity=0.194 Sum_probs=208.8
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeeeeEecCCCCceeEEEEecC--CCeEEEEEeeCCCeEE
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ--GTSKNTINSKKYGVDLIKFTHS--KTTAIHASTKVDATLR 290 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~~~d~~v~ 290 (515)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+ .+.+.++.+|..+|.+++|+++ ++.++++ +.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~--s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC--SYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEE--ETTTEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEE--cCCCEEE
Confidence 45789999999999999999999999999999999974 3677899999999999999864 6655544 5899999
Q ss_pred EEECCCCe--eeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCCe--EEEE-ecCCCeeEEEECCC----
Q psy6127 291 YLSLHDNK--YVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVRVWDLRQPNN--VGMI-QLSGNKPIAAYDPE---- 359 (515)
Q Consensus 291 vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~iwd~~~~~~--~~~~-~~~~~~~~~~~s~~---- 359 (515)
+||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|++|++||++++.. ...+ .+...+.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998874 56678889999999999998 88999999999999999987642 2223 45567899999997
Q ss_pred ---------CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC---CEEEEEECCCcEEEEECCCC
Q psy6127 360 ---------GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG---KLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 360 ---------~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~---~~l~~~s~dg~i~iwd~~~~ 427 (515)
+++|++|+.|++|++||++..... .........|...|.+++|+|++ ++|++++.|++|++||++++
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~-~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCce-EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 579999999999999999875421 11223345788899999999985 89999999999999999875
Q ss_pred ce--eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 428 NC--VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 428 ~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
.. .........+...+.+++|+|+|++|++++.||.|++|+..
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 31 12222112345569999999999999999999999999976
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=335.80 Aligned_cols=331 Identities=15% Similarity=0.180 Sum_probs=276.5
Q ss_pred ccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 164 SLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
...++.+|...+.++++.+... ..++++.++.+++|+ ..+++.+..+.+|.++|++++|+|++++|++|+.||
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~-----~la~~~~~g~v~iwd--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEP-----WVLTTLYSGRVEIWN--YETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSS-----EEEEEETTSEEEEEE--TTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred cceeeecCCCceEEEEECCCCC-----EEEEEeCCCEEEEEE--CCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC
Confidence 3456677776777888877543 223556788999999 778889999999999999999999999999999999
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eeeEEecCCCCCeEEEEEcC-CCCE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSP-VDDS 321 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~l~~~~-~~~~ 321 (515)
.|++||+.+++.+..+.+|...|.+++|+|+++.+++++ .|+.|++||+.++ .....+.+|...|.+++|+| +++.
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc--CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 999999999999999999999999999999999877654 7999999999987 77788899999999999999 8889
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEEecC--CCeeEEEECC--CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMIQLS--GNKPIAAYDP--EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~s~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
+++++.||.|++||+++++....+..+ ..+..++|+| ++.++++++.||.|++||++++. .......|...
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-----~~~~~~~~~~~ 230 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-----CVATLEGHMSN 230 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE-----EEEEEECCSSC
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-----EEEEEcCCCCC
Confidence 999999999999999988877666432 6689999999 99999999999999999998754 33334567788
Q ss_pred eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC--EEEEEeCCCcEEEEECCCCe--
Q psy6127 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ--FVASGSTDGQVHIWNAERGY-- 473 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~--~l~sgs~dg~I~iwd~~~~~-- 473 (515)
+.+++|+|+++++++++.||.|++||+.+++....+..+.. .+.+++|+|+|. ++++++ ++.+.+|++..+.
T Consensus 231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 306 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE---RSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPT 306 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSS---SEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCC
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCC---cEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCce
Confidence 99999999999999999999999999999998888876543 499999999987 455554 6668888876432
Q ss_pred --------EEEEE--------------------------------cCCCCCCeEEEEECCCCCEEEEeeC-CEEEEcCCC
Q psy6127 474 --------KVCVL--------------------------------DGDHPSAVQSLQFNPKYHMLASACS-NMAFWIPTL 512 (515)
Q Consensus 474 --------~~~~~--------------------------------~~~h~~~V~~l~~sp~~~~las~~~-dv~iW~~~~ 512 (515)
.+... ...+...+++++|+|+|+++++++. .+.+|++..
T Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~ 386 (814)
T 3mkq_A 307 LSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALA 386 (814)
T ss_dssp EEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred eEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECcc
Confidence 22210 0114456889999999999998874 389998653
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=307.62 Aligned_cols=284 Identities=18% Similarity=0.283 Sum_probs=241.9
Q ss_pred eeeeccccCCcE-EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 213 VAKVFRENTDKI-NSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 213 ~~~~~~~h~~~I-~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
....+++|.+.| .++.+ ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++ .++ +++.|++|++
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~--s~s~dg~i~v 187 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILV--SGSTDRTVRV 187 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEE--EEETTSCEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEE--EEeCCCCEEE
Confidence 446788999885 66666 56799999999999999999999999999999999999999988 443 4458999999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEEcCCCCeEEE----------------------Eec
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLS--PVDDSFISGSYDKTVRVWDLRQPNNVGM----------------------IQL 347 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~~~----------------------~~~ 347 (515)
||+++++.+..+.+|...|.+++|+ ++++++++|+.|++|++||++++..... ...
T Consensus 188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 9999999999999999999999998 5778999999999999999998764321 111
Q ss_pred CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy6127 348 SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 348 ~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~ 427 (515)
.......+++++++++++|+.||.|++||+++.+ .......|...|.+++|+|+++++++++.||.|++||++++
T Consensus 268 ~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 268 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK-----CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred CccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 1223445567899999999999999999998754 44445678889999999999999999999999999999999
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC-CEE
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS-NMA 506 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~-dv~ 506 (515)
+++..+.+|.. .+.+++|+ ++++++++.||.|++||+.+++...... |...+..++|+|++.++++++. .++
T Consensus 343 ~~~~~~~~h~~---~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~dg~i~ 415 (464)
T 3v7d_B 343 ELMYTLQGHTA---LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGSENQFN 415 (464)
T ss_dssp EEEEEECCCSS---CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEETTEEE
T ss_pred cEEEEEeCCCC---cEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEecCCeEE
Confidence 99998887544 48899987 6899999999999999999988777765 6677888999999999999874 499
Q ss_pred EEcCCCC
Q psy6127 507 FWIPTLS 513 (515)
Q Consensus 507 iW~~~~~ 513 (515)
+|++..+
T Consensus 416 iwd~~~g 422 (464)
T 3v7d_B 416 IYNLRSG 422 (464)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998764
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=300.71 Aligned_cols=296 Identities=10% Similarity=0.094 Sum_probs=240.6
Q ss_pred ccCCceeEEEEEEeeccccceeeeeeeCC---CCcEEEEccceeeeeEeeee-ccccCCcEEEEEEcCC---CCEEEEEe
Q psy6127 168 LESPHFVSLFVTFVSRVLTMAASLAHSRS---SRTITKCSENLVRSYRVAKV-FRENTDKINSLDYSSD---GSLLISCS 240 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~~---~~~~i~~wd~~~~~~~~~~~-~~~h~~~I~~l~~spd---~~~lasgs 240 (515)
+++|...+.++.|.+.... ++.+++ .++.+++|+ +...+.... ..+|...|.+++|+|+ +++|++|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~----l~~~~s~~~~d~~v~iw~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAK----FVTMGNFARGTGVIQLYE--IQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp EEECSSCEEEEEECTTSSE----EEEEEC--CCCEEEEEEE--ECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred ccCCCCceEEEEEcCCCce----EEEecCccCCCcEEEEEe--CCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec
Confidence 4567667888888875432 223444 389999999 666655433 3389999999999998 69999999
Q ss_pred CCCeEEEEECCCCe-eeeEecCCCCceeEEEE------ecCCCeEEEEEeeCCCeEEEEECCCCe-eeEEecCCCC----
Q psy6127 241 DDDQIIIYDCEQGT-SKNTINSKKYGVDLIKF------THSKTTAIHASTKVDATLRYLSLHDNK-YVRYFPGHVR---- 308 (515)
Q Consensus 241 ~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~s~~~d~~v~vwd~~~~~-~~~~~~~h~~---- 308 (515)
.||.|++||+.+++ ....+.+|...|.+++| +|+++.+++++ .|+.|++||+.+++ .+..+..|.+
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS--RDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE--TTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEe--CCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 99999999999988 88999999999999965 57787776554 79999999999887 6777766654
Q ss_pred CeEEEE----EcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECC---CCCEEEEEECCCcEEEEEeecCC
Q psy6127 309 KVSSLN----LSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP---EGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 309 ~v~~l~----~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~---~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
.+.+++ |+|+++++++++.||.|++||+++++......+...+.+++|+| ++..+++++.||.|++||++...
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 899998 78899999999999999999999999887778888899999999 99999999999999999999854
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCc-------------------eeEEeeccccCCC
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGK-LILVSTNGSIIRLFDAFNGN-------------------CVQSLSGVLNNNA 441 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~~~-------------------~~~~~~~~~~~~~ 441 (515)
............|...|.+++|+|+++ ++++++.||.|++||++++. .+..+.. +..
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~ 322 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL---STQ 322 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC---CSS
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc---CCC
Confidence 332222222346788999999999998 89999999999999998653 3344444 455
Q ss_pred CCEEEEEecCCCEEE-EEeCCCcEEEEECCCCeE
Q psy6127 442 SPLEATFTPDSQFVA-SGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~-sgs~dg~I~iwd~~~~~~ 474 (515)
.|.+++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 699999999999998 899999999999987654
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=323.82 Aligned_cols=292 Identities=20% Similarity=0.241 Sum_probs=241.4
Q ss_pred ccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEcccee---eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 166 SSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV---RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~---~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
..+++|...|.++++.+.... +.++++.|+.+++|+-.. ....+.+.+.+|...|.+++|+|++++|++|+.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~----~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNAD----IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCS----EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred hhcccCCceeEEEEecCCCCC----EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 357789888888887754322 344888999999998221 1234567889999999999999999999999999
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe---cCCCCCeEEEEEcCCC
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF---PGHVRKVSSLNLSPVD 319 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~ 319 (515)
|+|++||+.+++....+.+|...|.+++|+|++..+++++ .|++|++||.......... .+|...|.+++|+|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS--RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe--CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 9999999999999999999999999999999999887665 7999999998765443332 4789999999999987
Q ss_pred --CEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 320 --DSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 320 --~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
..+++++.|++|++||+++++....+. +...+.+++|+|+++++++|+.||.|++||+++++ ..... .+..
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~-----~~~~~-~~~~ 603 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK-----KLYSL-EANS 603 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE-----EEECC-BCSS
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----eEEEe-cCCC
Confidence 589999999999999999999888874 55679999999999999999999999999998754 22222 2345
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc----------------CCCCCEEEEEecCCCEEEEEeC
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN----------------NNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~----------------~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
.+.+++|+|++.++++++ ++.|++||+++++.+..+..+.. +...+++++|+|+|++|++|+.
T Consensus 604 ~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp CEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 799999999998887765 55699999999988877653221 1123678999999999999999
Q ss_pred CCcEEEEECC
Q psy6127 461 DGQVHIWNAE 470 (515)
Q Consensus 461 dg~I~iwd~~ 470 (515)
||.|++|++.
T Consensus 683 Dg~i~iW~i~ 692 (694)
T 3dm0_A 683 DGVIRVWGIG 692 (694)
T ss_dssp TSEEEEEEC-
T ss_pred CCeEEEEecc
Confidence 9999999985
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=314.16 Aligned_cols=281 Identities=16% Similarity=0.247 Sum_probs=239.2
Q ss_pred CCcEEEEEEcCCCC-EEEEE----------eCCCeEEEEECCCCe---eeeEecCCCCceeEEEEecCCCeEEEEEeeCC
Q psy6127 221 TDKINSLDYSSDGS-LLISC----------SDDDQIIIYDCEQGT---SKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 221 ~~~I~~l~~spd~~-~lasg----------s~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d 286 (515)
...|.+++|+|+++ +|++| +.|+.|++||+.+++ ....+ .|...|.+++|+|++..+++++ .|
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~--~d 88 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGAL--DN 88 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEE--SS
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEc--cC
Confidence 34688999999987 99999 899999999999875 33333 5788999999999999887665 79
Q ss_pred CeEEEEECCC----CeeeEEecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCC------eEEEE----ecCCCe
Q psy6127 287 ATLRYLSLHD----NKYVRYFPGHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLRQPN------NVGMI----QLSGNK 351 (515)
Q Consensus 287 ~~v~vwd~~~----~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~~~------~~~~~----~~~~~~ 351 (515)
+.|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+++++ ..... .+...+
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV 168 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC
T ss_pred CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe
Confidence 9999999987 4578889999999999999998 8899999999999999999886 33222 455678
Q ss_pred eEEEECCC-CCEEEEEECCCcEEEEEeecCCCCCceeeecCCC------CCcCeEEEEEcCCC-CEEEEEECCC---cEE
Q psy6127 352 PIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE------RGCEWTGLKFSPDG-KLILVSTNGS---IIR 420 (515)
Q Consensus 352 ~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~------~~~~i~~l~~sp~~-~~l~~~s~dg---~i~ 420 (515)
.+++|+|+ +.++++++.||.|++||+++.+ ....... +...+.+++|+|++ .++++++.|+ .|+
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSNFASIWDLKAKK-----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp CEEEECSSCTTEEEEESSSSCEEEEETTTTE-----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred eEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 99999999 7899999999999999998754 2222222 27789999999997 6899999998 999
Q ss_pred EEECCCC-ceeEEee-ccccCCCCCEEEEEec-CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCC-C
Q psy6127 421 LFDAFNG-NCVQSLS-GVLNNNASPLEATFTP-DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKY-H 496 (515)
Q Consensus 421 iwd~~~~-~~~~~~~-~~~~~~~~i~~~~~sp-~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~-~ 496 (515)
+||++++ .+...+. .| ...+.+++|+| ++++|++++.||.|++||+.+++++..+.. |.+.|++++|+|++ .
T Consensus 244 ~~d~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 319 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGH---QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA-RGNWCFKTKFAPEAPD 319 (416)
T ss_dssp EEETTSTTSCSBCCCSCC---SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC-SSSCCCCEEECTTCTT
T ss_pred EEeCCCCCCCcEEeecCc---cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC-CCCceEEEEECCCCCC
Confidence 9999987 4555555 43 44599999999 999999999999999999999999999988 99999999999998 8
Q ss_pred EEEEeeCC--EEEEcCCCC
Q psy6127 497 MLASACSN--MAFWIPTLS 513 (515)
Q Consensus 497 ~las~~~d--v~iW~~~~~ 513 (515)
++++++.| +++|++...
T Consensus 320 ~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 320 LFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEEECCSSSEEEEEESCCC
T ss_pred EEEEEecCCcEEEEEccCC
Confidence 99999865 999998754
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=298.00 Aligned_cols=288 Identities=16% Similarity=0.206 Sum_probs=242.2
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCC---CCEEEEEeCCCeEEEEECCC-Ceee-eEecCCCCceeEEEEecCCCeEEEEE
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSD---GSLLISCSDDDQIIIYDCEQ-GTSK-NTINSKKYGVDLIKFTHSKTTAIHAS 282 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd---~~~lasgs~dg~i~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~s 282 (515)
..+.+.+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ +... ..+.+|...|.+++|+|+++.+++++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 5566777889999999999999999 69999999999999999997 5544 77889999999999999999887665
Q ss_pred eeCCCeEEEEECCCCeeeEEecCCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCC
Q psy6127 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL--SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG 360 (515)
Q Consensus 283 ~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~ 360 (515)
.|+.|++||+++++.+. +.+|...|.+++| +|++++|++++.||.|++||+++++.+..+..+..+.++.+. +
T Consensus 106 --~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~ 180 (368)
T 3mmy_A 106 --CDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI--Y 180 (368)
T ss_dssp --TTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE--T
T ss_pred --CCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec--C
Confidence 79999999999998776 4569999999999 899999999999999999999999999888877766666555 4
Q ss_pred CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCE----EEEEECCCcEEEEECCCC---ceeEEe
Q psy6127 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKL----ILVSTNGSIIRLFDAFNG---NCVQSL 433 (515)
Q Consensus 361 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~----l~~~s~dg~i~iwd~~~~---~~~~~~ 433 (515)
..+++++.++.+.+|+++..... ..............+++.++... +++++.|+.|++||++.. .....+
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSE---FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEE---EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE
T ss_pred CeeEEEeCCCcEEEEEeccccch---hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee
Confidence 58889999999999999874321 11222333445556666655544 999999999999999987 456666
Q ss_pred eccccC---------CCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 434 SGVLNN---------NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 434 ~~~~~~---------~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
..+... ...+.+++|+|++++|++|+.||.|++||+.+++++..+.. |..+|++++|+|++++|++++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ-LDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-CSSCEEEEEECTTSSCEEEEECC
T ss_pred eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC-CCCCceEEEECCCCCeEEEEecc
Confidence 665431 11499999999999999999999999999999999999987 99999999999999999999865
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=305.47 Aligned_cols=306 Identities=15% Similarity=0.247 Sum_probs=262.8
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
+.|++|+.++.| ++||..+++.+.++.+|...+.++.+.+. +.++++.|+.+++|+ ...++
T Consensus 130 ~~l~sg~~dg~i----------~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-------~l~s~~~dg~i~vwd--~~~~~ 190 (445)
T 2ovr_B 130 NRIVSGSDDNTL----------KVWSAVTGKCLRTLVGHTGGVWSSQMRDN-------IIISGSTDRTLKVWN--AETGE 190 (445)
T ss_dssp TEEEEEETTSCE----------EEEETTTCCEEEECCCCSSCEEEEEEETT-------EEEEEETTSCEEEEE--TTTTE
T ss_pred CEEEEEECCCcE----------EEEECCCCcEEEEEcCCCCCEEEEEecCC-------EEEEEeCCCeEEEEE--CCcCc
Confidence 568888888888 99999999999999999888888888754 334788889999999 77889
Q ss_pred eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 213 VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 213 ~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
+...+.+|...|.+++|+ ++.+++|+.||+|++||+.+++....+.+|...+.+++| ++..+++++ .|+.|++|
T Consensus 191 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~dg~i~iw 264 (445)
T 2ovr_B 191 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA--YDFMVKVW 264 (445)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE--TTSCEEEE
T ss_pred EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc--CCCEEEEE
Confidence 999999999999999996 568999999999999999999999999999999999999 566666554 79999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECCCc
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
|+++++.+..+.+|...|.+++| ++..+++++.|+.|++||+++++.+..+..+ ..+.++. ++++.+++|+.||.
T Consensus 265 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~ 340 (445)
T 2ovr_B 265 DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME--LKDNILVSGNADST 340 (445)
T ss_dssp EGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE--EETTEEEEEETTSC
T ss_pred ECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE--EeCCEEEEEeCCCe
Confidence 99999999999999999999999 6899999999999999999999998888544 3344444 46789999999999
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc--ccCCCCCEEEEEe
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV--LNNNASPLEATFT 449 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~i~~~~~s 449 (515)
|++||+++++ ....+.....|...|.+++|+ ++++++++.||.|++||+.+++.+..+... ..+...+.+++|+
T Consensus 341 i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s 416 (445)
T 2ovr_B 341 VKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRAS 416 (445)
T ss_dssp EEEEETTTCC--EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEEC
T ss_pred EEEEECCCCc--EEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEec
Confidence 9999998754 223333334578899999995 579999999999999999999998887321 2345569999999
Q ss_pred cCCCEEEEEeCCCc----EEEEECCC
Q psy6127 450 PDSQFVASGSTDGQ----VHIWNAER 471 (515)
Q Consensus 450 p~g~~l~sgs~dg~----I~iwd~~~ 471 (515)
|++.++++|+.||+ |.+||+..
T Consensus 417 ~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 417 NTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCEEEEEEcccCCCCccEEEEEECCC
Confidence 99999999999998 99999875
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=316.10 Aligned_cols=298 Identities=13% Similarity=0.139 Sum_probs=257.3
Q ss_pred CcEEEEccceeeee----EeeeeccccCCc-EEEEEEcC--CCCEEEEEeCCCeEEEEECCCC--------eeeeEecCC
Q psy6127 198 RTITKCSENLVRSY----RVAKVFRENTDK-INSLDYSS--DGSLLISCSDDDQIIIYDCEQG--------TSKNTINSK 262 (515)
Q Consensus 198 ~~~i~~wd~~~~~~----~~~~~~~~h~~~-I~~l~~sp--d~~~lasgs~dg~i~iwd~~~~--------~~~~~~~~~ 262 (515)
++.+.+|+ +.+. +....+.+|.+. |++++|+| ++++||+|+.||.|++||+.++ +....+..|
T Consensus 38 ~~~v~v~~--~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 115 (615)
T 1pgu_A 38 GKSAFVRC--LDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL 115 (615)
T ss_dssp TTEEEEEE--CCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC
T ss_pred CCeEEEEE--CCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcc
Confidence 56799999 6677 788999999999 99999999 9999999999999999999754 677788899
Q ss_pred CCceeEEEEecCCCeEEEEEeeCC--CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVD--ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQP 339 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d--~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~ 339 (515)
...|.+++|+|++..+++++.+.+ +.|++|| .++.+..+.+|...|.+++|+|+++ .+++++.|+.|++||++++
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~ 193 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 193 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB
T ss_pred cccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc
Confidence 999999999999999888763222 5777777 6778889999999999999999998 8999999999999999999
Q ss_pred CeEEEEe-cCC---CeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCCCceeeecC-C---CCCcCeEEEEEcCCCCEE
Q psy6127 340 NNVGMIQ-LSG---NKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP-G---ERGCEWTGLKFSPDGKLI 410 (515)
Q Consensus 340 ~~~~~~~-~~~---~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~-~---~~~~~i~~l~~sp~~~~l 410 (515)
+....+. +.. .+.+++|+|+ ++++++++.||.|++||+++++ ..... . .|...|.+++|+ +++++
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~~-~~~~l 267 (615)
T 1pgu_A 194 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE-----FLKYIEDDQEPVQGGIFALSWL-DSQKF 267 (615)
T ss_dssp EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC-----EEEECCBTTBCCCSCEEEEEES-SSSEE
T ss_pred ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC-----EeEEecccccccCCceEEEEEc-CCCEE
Confidence 9888885 444 6999999999 9999999999999999998754 33333 3 788899999999 99999
Q ss_pred EEEECCCcEEEEECCCCceeEEeeccc-cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEE
Q psy6127 411 LVSTNGSIIRLFDAFNGNCVQSLSGVL-NNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL 489 (515)
Q Consensus 411 ~~~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 489 (515)
++++.|+.|++||+++++.+..+..+. .....+.++.|+ +++++++++.||.|++||+.+++++..+.+ |.+.|+++
T Consensus 268 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~-~~~~v~~~ 345 (615)
T 1pgu_A 268 ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISG-HNKGITAL 345 (615)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECC-CSSCEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeC-CCCCEEEE
Confidence 999999999999999999988887652 222346778885 899999999999999999999999999988 99999999
Q ss_pred EECCCCCEEEEee--CCEEEEcCC
Q psy6127 490 QFNPKYHMLASAC--SNMAFWIPT 511 (515)
Q Consensus 490 ~~sp~~~~las~~--~dv~iW~~~ 511 (515)
+| |+ +++++ +.+++|++.
T Consensus 346 ~~-~~---l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 346 TV-NP---LISGSYDGRIMEWSSS 365 (615)
T ss_dssp ET-TT---TEEEETTSCEEETTTT
T ss_pred Ee-cC---cEEECCCCeEEEEEch
Confidence 99 87 55555 348888753
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=300.52 Aligned_cols=303 Identities=16% Similarity=0.163 Sum_probs=243.0
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeec--cccCCcEEEEEEcC-
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVF--RENTDKINSLDYSS- 231 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~--~~h~~~I~~l~~sp- 231 (515)
.+|+....+...++.+|...+.++.+.+.... +.++++.|+.+++|+ ....+....+ .+|.+.|.+++|+|
T Consensus 56 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~----~l~s~~~dg~i~iwd--~~~~~~~~~~~~~~h~~~v~~~~~~~~ 129 (383)
T 3ei3_B 56 FIRSLKSYKLHRTASPFDRRVTSLEWHPTHPT----TVAVGSKGGDIILWD--YDVQNKTSFIQGMGPGDAITGMKFNQF 129 (383)
T ss_dssp HHHHHTTCEEEEEECCCSSCEEEEEECSSCTT----EEEEEEBTSCEEEEE--TTSTTCEEEECCCSTTCBEEEEEEETT
T ss_pred ccccccccceEEeccCCCCCEEEEEECCCCCC----EEEEEcCCCeEEEEe--CCCcccceeeecCCcCCceeEEEeCCC
Confidence 45666777777888899887888888876421 334677788999999 5545444444 47999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCC---CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSK---KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR 308 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~ 308 (515)
++++|++++.|+.|++||+.+ .....+..+ ...|.+++|+|++..+++++ .|+.|++||+ +++.+..+.+|..
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~-~~~~~~~~~~h~~ 205 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD--STGRLLLLGL-DGHEIFKEKLHKA 205 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEE--TTSEEEEEET-TSCEEEEEECSSS
T ss_pred CCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEEC--CCCCEEEEEC-CCCEEEEeccCCC
Confidence 789999999999999999985 555555444 47899999999999777664 7999999999 5778888999999
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEEcCC----CCeEEEEecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCC
Q psy6127 309 KVSSLNLSPVDD-SFISGSYDKTVRVWDLRQ----PNNVGMIQLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDK 382 (515)
Q Consensus 309 ~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~ 382 (515)
.|.+++|+|+++ ++++++.|+.|++||+++ +..+..+.+...+.+++|+| ++++|++++.|+.|++||+++...
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 999999999999 999999999999999998 67777778888899999999 999999999999999999988654
Q ss_pred CCceeeec--CCCCC----------cCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 383 GPFASFKC--PGERG----------CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 383 ~~~~~~~~--~~~~~----------~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
........ ...+. ..+..++|+|++++ +++.|+.|++||+.+++.+..+.++. +...+..++|+|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~-~~~~~~~~~~s~ 362 (383)
T 3ei3_B 286 PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPN-AAGIISLNKFSP 362 (383)
T ss_dssp CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTT-BCSCCCEEEECT
T ss_pred ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCC-CCceEEEEEEec
Confidence 32211110 11112 23445666666666 66789999999999999999887643 233477789999
Q ss_pred CCCEEEEEeCCCcEEEEECCC
Q psy6127 451 DSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~ 471 (515)
++++|++|+ ||.|++||+++
T Consensus 363 ~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 363 TGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TSSEEEEEE-TTEEEEEECC-
T ss_pred CccEEEEec-CCcEEEEecCC
Confidence 999999997 99999999864
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=298.22 Aligned_cols=278 Identities=19% Similarity=0.305 Sum_probs=236.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec--CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN--SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
.++.|+||++ ++||+|. |++|+|||..+++....+. +|...|++++|+|+++.+++++ .|+.|++||+++++.+
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs--~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT--SSAEVQLWDVQQQKRL 182 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE--CCCeEEEEEcCCCcEE
Confidence 4678999986 4788775 8999999999998877664 6677899999999999887665 7999999999999999
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe-EEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 301 RYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN-VGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
..+.+|...+.+++++ +..+++|+.|+.+++||...... +..+ .+...+..+.++|+++++++++.|+.+++|+..
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 9999999999998886 68999999999999999987554 3444 455668899999999999999999999999998
Q ss_pred cCCCCCceeeecCCCCCcCeEEEEEcCCCC-EEEEE--ECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEE
Q psy6127 379 SYDKGPFASFKCPGERGCEWTGLKFSPDGK-LILVS--TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV 455 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l 455 (515)
..+.... .......+...|.+++|+|++. .++++ +.|+.|++||+.++++...+..+. .+.++.|+|+++.+
T Consensus 261 ~~~~~~~-~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~----~v~~~~~~~~~~~l 335 (420)
T 4gga_A 261 PGEGGWV-PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS----QVCSILWSPHYKEL 335 (420)
T ss_dssp CCSSCSC-CSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS----CEEEEEEETTTTEE
T ss_pred cccccce-eeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc----ceeeeeecCCCCeE
Confidence 7653221 2233456778899999999665 55544 479999999999999988887543 38999999999988
Q ss_pred EEEe--CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 456 ASGS--TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 456 ~sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
++++ .||.|+|||+.+++++..+.+ |.+.|++++|+|||.+|++|+.| ++||++..
T Consensus 336 v~~sg~~d~~I~iwd~~~~~~v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEecCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 8765 789999999999999999998 99999999999999999999876 99999853
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=299.88 Aligned_cols=281 Identities=18% Similarity=0.284 Sum_probs=236.8
Q ss_pred ccccCCcE--EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 217 FRENTDKI--NSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 217 ~~~h~~~I--~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
..+|...+ .+++|++ ..+++++.|+.|++||+.+++....+.. |...|.+++|+|+++.+++++ .||.|++||
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~--~dg~i~iwd 162 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL--GNGLVDIYD 162 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE--TTSCEEEEE
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC--CCCeEEEEE
Confidence 45776654 4456654 5688899999999999999998887766 788999999999999877665 799999999
Q ss_pred CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCc
Q psy6127 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ-PNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
+.+++.+..+.+|...|.+++|+ ++.+++|+.||.|++||++. +.....+ .+...+.+++|+|+++++++|+.||.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 99999999999999999999995 67999999999999999994 4555555 45667999999999999999999999
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC-EEEEEE--CCCcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK-LILVST--NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
|++||+++.. .......|...|.+++|+|++. .+++++ .|+.|++||+.+++++..+.. ...+.+++|
T Consensus 241 v~iwd~~~~~-----~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~----~~~v~~~~~ 311 (401)
T 4aez_A 241 VQIWDARSSI-----PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA----GSQVTSLIW 311 (401)
T ss_dssp EEEEETTCSS-----EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC----SSCEEEEEE
T ss_pred EEEccCCCCC-----ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC----CCcEEEEEE
Confidence 9999998754 3334456788899999999775 555554 699999999999999888863 334999999
Q ss_pred ecCCCEEEEE--eCCCcEEEEECCCCeEEEE--EcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 449 TPDSQFVASG--STDGQVHIWNAERGYKVCV--LDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 449 sp~g~~l~sg--s~dg~I~iwd~~~~~~~~~--~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
+|++++++++ +.||.|++||+.+++.... +.+ |.+.|++++|+|++.+|++++.| +++|++...
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA-HDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC-CSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCccceeEEEecC-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 9999999994 4899999999999765554 556 99999999999999999999865 999998754
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=301.29 Aligned_cols=341 Identities=14% Similarity=0.157 Sum_probs=244.3
Q ss_pred CCcchhhccccccccCCceeEEEEEEee-ccccceeeeeeeCCCCcEEEEccceeeeeEeeeec-------------ccc
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVS-RVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVF-------------REN 220 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~-------------~~h 220 (515)
++|+...++....+.+|...+.++.+.+ ... +.++++.++.+++|+ +...+....+ .+|
T Consensus 26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-----~l~~~~~dg~i~iw~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
T 4a11_B 26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGR-----YMLSGGSDGVIVLYD--LENSSRQSYYTCKAVCSIGRDHPDVH 98 (408)
T ss_dssp HHHTEEECTTEEECCCCSSCEEEEEECTTTCC-----EEEEEETTSCEEEEE--CCCCSSSSCEEECEEEEECTTCTTCC
T ss_pred eeeccccCcceeeeeccCCcEEEEEEecCCCC-----EEEEEcCCCeEEEEE--CCCCcccceEeccccccccccccccC
Confidence 8899999999999999988888888877 332 334677788999998 5554444333 369
Q ss_pred CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCC---eEEEEEeeCCCeEEEEECCC
Q psy6127 221 TDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKT---TAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 221 ~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~s~~~d~~v~vwd~~~ 296 (515)
...|.+++|+| ++++|++++.||.|++||+.+++....+. +...+.++.|+|.+. .++++ +.++.|++||+++
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~d~~~ 175 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVG--TRGPKVQLCDLKS 175 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEE--ESSSSEEEEESSS
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEE--cCCCeEEEEeCCC
Confidence 99999999999 78899999999999999999999888776 667899999998654 44444 4799999999999
Q ss_pred CeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCC-eEEEE----------------ecCCCeeEEEECC
Q psy6127 297 NKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPN-NVGMI----------------QLSGNKPIAAYDP 358 (515)
Q Consensus 297 ~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~-~~~~~----------------~~~~~~~~~~~s~ 358 (515)
++.+..+.+|...|.+++|+|+++ .+++++.||.|++||++++. ....+ .+...+.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 999999999999999999999998 69999999999999998775 33332 3445689999999
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN 438 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 438 (515)
+++++++++.||.|++||+++++................+........+..+++++.++.|++||+.+++.+..+.+|..
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence 99999999999999999998865322111111111112222222233455677778899999999999999998887554
Q ss_pred CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee--CCEEEEcCCC
Q psy6127 439 NNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC--SNMAFWIPTL 512 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~--~dv~iW~~~~ 512 (515)
.|.+++|+|++++|++++.||.|++||+.+++++..... +. ....+.|... ...+++ +.+++|+.+.
T Consensus 336 ---~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 336 ---TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE-TT---TKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ---CEEEEEEETTTTEEEEEETTSCEEEEEECC--------------------------------------------
T ss_pred ---eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc-eE---eccccccccceeecccCccCceeecCCcc
Confidence 499999999999999999999999999999988776553 22 1233444222 222332 3499998764
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=293.24 Aligned_cols=290 Identities=16% Similarity=0.173 Sum_probs=249.1
Q ss_pred cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCe
Q psy6127 165 LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQ 244 (515)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~ 244 (515)
..++.+|...+.++.+.+... +.++++.++.+++|+ +..++....+.+|.+.|.+++|+|++++|++++.||.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~vwd--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 97 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGD-----LLFSCSKDSSASVWY--SLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYS 97 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSC-----EEEEEESSSCEEEEE--TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred cEEEEEeeceEEEEEEcCCCC-----EEEEEeCCCEEEEEe--CCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 345778877788888876543 334667788899999 7788899999999999999999999999999999999
Q ss_pred EEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC-----CeEEEEECCCCe-----------eeEEecCCCC
Q psy6127 245 IIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD-----ATLRYLSLHDNK-----------YVRYFPGHVR 308 (515)
Q Consensus 245 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d-----~~v~vwd~~~~~-----------~~~~~~~h~~ 308 (515)
|++||+.+++.+..+. +...+.+++|+|++..+++++ .+ +.|++||+.++. ....+..|..
T Consensus 98 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 98 IKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAIL--DNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEE--CCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred EEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEec--CCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 9999999999988888 788999999999999888776 46 999999987653 3344556666
Q ss_pred --CeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCC
Q psy6127 309 --KVSSLNLSPVDDSFISGSYDKTVRVWDLRQ-PNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGP 384 (515)
Q Consensus 309 --~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~ 384 (515)
.+.+++|+|+++.|++++.||.|++||+++ ++....+. +...+.+++|+|++++|++++.|+.|++||+++..
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--- 251 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ--- 251 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc---
Confidence 999999999999999999999999999998 66666664 55679999999999999999999999999998754
Q ss_pred ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC--------------cEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 385 FASFKCPGERGCEWTGLKFSPDGKLILVSTNGS--------------IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 385 ~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
..... .+...+..++|+|+++++++++.++ .+++||..+++.+..+.+|.. .|.+++|+|
T Consensus 252 --~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~v~~~~~s~ 325 (369)
T 3zwl_B 252 --VLKKY-ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG---PLNTVAISP 325 (369)
T ss_dssp --EEEEE-ECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS---CEEEEEECT
T ss_pred --eeeee-cCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC---cEEEEEECC
Confidence 22221 1566889999999999999999888 899999999999988887544 499999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCe
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
++++|++++.||.|++|+++++.
T Consensus 326 ~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 326 QGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp TSSEEEEEETTSEEEEEEECHHH
T ss_pred CCCEEEEEcCCCeEEEEECcccc
Confidence 99999999999999999998654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=301.13 Aligned_cols=295 Identities=14% Similarity=0.182 Sum_probs=236.4
Q ss_pred cCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccc-----cCCcEEEEEEcCC----CCEEEEE
Q psy6127 169 ESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRE-----NTDKINSLDYSSD----GSLLISC 239 (515)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~-----h~~~I~~l~~spd----~~~lasg 239 (515)
++|...+.++.|.+........+. .+..++.+++|+ ....+.+..+.. |...|++++|+|+ +++|++|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~-~~~~~~~v~vw~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVF-ATVGSNRVTLYE--CHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEE-EEEETTEEEEEE--ECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred cCCCCceEEEEEecccCCCCceEE-EECCCCEEEEEE--cCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 467777888888864111111122 233334799998 665555555543 6688999999998 6799999
Q ss_pred eCCCeEEEEECCCCeeeeEecCCCCceeEEEEec-CCCeEEEEEeeCCCeEEEEECCCCeeeEEe---cCCCCCeEEEEE
Q psy6127 240 SDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTH-SKTTAIHASTKVDATLRYLSLHDNKYVRYF---PGHVRKVSSLNL 315 (515)
Q Consensus 240 s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~---~~h~~~v~~l~~ 315 (515)
+.||.|++||+.+++.+..+.+|...|.+++|+| ++..+++++ .|+.|++||+++++.+..+ .+|...|.+++|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS--KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe--CCCeEEEEEeecCeEEEEecccccccCceeEEEE
Confidence 9999999999999999999999999999999999 777666554 7999999999999999888 789999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-----------------------------cCCCeeEEEECCCCCEEEEE
Q psy6127 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-----------------------------LSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 316 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~s~~~~~l~~g 366 (515)
+|++++|++++.||.|++||+++++....+. +...+.+++|+ +++++++
T Consensus 170 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 170 DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 9999999999999999999999775443221 56678899998 7799999
Q ss_pred ECCCcEEEEEeecCCCC---------CceeeecCCCCCcCeEEEEEcCC--CCEEEEEECCCcEEEEECCCCceeE----
Q psy6127 367 VNSDSIKLYDVRSYDKG---------PFASFKCPGERGCEWTGLKFSPD--GKLILVSTNGSIIRLFDAFNGNCVQ---- 431 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~---------~~~~~~~~~~~~~~i~~l~~sp~--~~~l~~~s~dg~i~iwd~~~~~~~~---- 431 (515)
+.|+.|++||++..... ..........|...|.+++|+|+ +++|++++.||.|++||+.+++...
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 327 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT 327 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccce
Confidence 99999999999875431 11123334456777889999999 9999999999999999999886433
Q ss_pred EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 432 SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
.+..+. +...|.+++|+|++++|++++.||.|++||+.+
T Consensus 328 ~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 328 TLTHHK-CGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECCTT-CCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEcccc-cCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 454432 245699999999999999999999999999853
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=279.93 Aligned_cols=277 Identities=19% Similarity=0.296 Sum_probs=231.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec--CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN--SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
.++|+||+++ +||+|. |++|+|||+.+++.+..+. +|...|.+++|+|+++.+++++ .|++|++||+++++.+.
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs--~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT--SSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE--CCCcEEEeecCCceeEE
Confidence 5789999986 777765 8999999999999887765 6677899999999999887664 79999999999999999
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-EEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-GMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
.+.+|...+.++.+. +..+++++.++.+++|+....... ..+ .+...+..+.++++++++++++.|+.|++||+++
T Consensus 104 ~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 104 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 999999998876665 679999999999999999876543 333 4556688999999999999999999999999987
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcCCCCEE---EEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLI---LVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l---~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
++.... .......+...+..++++|++..+ ++++.++.|++||............ ...+..+.|+|+++.++
T Consensus 182 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 182 GEGGWV-PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----HSQVCSILWSPHYKELI 256 (318)
T ss_dssp BTTBSC-CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC----SSCEEEEEEETTTTEEE
T ss_pred Cccccc-ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc----eeeeeeeeecccccceE
Confidence 643222 222234566789999999976533 3556789999999998887666543 33389999999999887
Q ss_pred EEe--CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 457 SGS--TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 457 sgs--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
+++ .|+.|++||+.+++++..+.+ |.+.|++++|+|++++|++++.| ++||++..
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~g-H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 654 799999999999999999998 99999999999999999999866 99999854
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=285.77 Aligned_cols=291 Identities=18% Similarity=0.165 Sum_probs=244.0
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
.+.+.++.+|...+.++.+ +... ..++++.++.+++|+ ....+....+.+|...|.+++|+|++++|++|+.
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~-----~l~s~~~dg~v~vw~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 79 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDS-----KVASVSRDGTVRLWS--KDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK 79 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETT-----EEEEEETTSEEEEEE--ESSSEEEEEEEECSSCEEEEEEETTTTEEEEEET
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCC-----EEEEEEcCCcEEEEE--CCCCEEEEEeecCCccEEEEEECCCCCEEEEecC
Confidence 3667788899777777777 3322 334778899999999 7888888999999999999999999999999999
Q ss_pred CCeEEEEECCCC---eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC-
Q psy6127 242 DDQIIIYDCEQG---TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP- 317 (515)
Q Consensus 242 dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~- 317 (515)
||.|++|++... +....+..|...|.+++| +++.++++ +.|+.|++|| .++....+..|...+.+++|.|
T Consensus 80 dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~--~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 153 (313)
T 3odt_A 80 DTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISG--SWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF 153 (313)
T ss_dssp TSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEE--ETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET
T ss_pred CCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEE--eCCCCEEEEc--CCcEEEecccCCCceeEEEEccC
Confidence 999999998754 567788999999999999 45555544 4799999999 7788888999999999999998
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCeEEEEe--cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCC
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
+++.+++++.||.|++|| .++....+. +...+.+++|+|++. +++++.||.|++||+++++ .......|.
T Consensus 154 ~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~-----~~~~~~~~~ 225 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD-----VLRTYEGHE 225 (313)
T ss_dssp TTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC-----EEEEEECCS
T ss_pred CCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh-----hhhhhhcCC
Confidence 899999999999999999 444555553 566789999999998 9999999999999998754 334445678
Q ss_pred cCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV 475 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~ 475 (515)
..+++++|+|++ .+++++.||.|++||+++++....+..+.. .+.+++|+|+++ +++++.||.|++||+.+++..
T Consensus 226 ~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 226 SFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI---SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp SCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS---CEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred ceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc---eEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 899999999999 688999999999999999999988877543 499999999998 556889999999999988765
Q ss_pred EEEc
Q psy6127 476 CVLD 479 (515)
Q Consensus 476 ~~~~ 479 (515)
....
T Consensus 301 ~~~~ 304 (313)
T 3odt_A 301 SEDE 304 (313)
T ss_dssp C---
T ss_pred ehhh
Confidence 5443
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=292.21 Aligned_cols=248 Identities=15% Similarity=0.190 Sum_probs=200.5
Q ss_pred eccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--eeeEecCCCCceeEEEEecC--CCeEEEEEeeCCCeEEE
Q psy6127 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHS--KTTAIHASTKVDATLRY 291 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~~~d~~v~v 291 (515)
.+.+|.+.|++++|+|+|++||+|+.|++|++||+.+++ .+..+.+|...|.+++|+++ ++.++++ +.|++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~--s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC--SYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEE--ETTSCEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEE--ECCCEEEE
Confidence 467999999999999999999999999999999998775 46788999999999999863 6666655 48999999
Q ss_pred EECCCCe--eeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCCeEEE---E-ecCCCeeEEEECCC----
Q psy6127 292 LSLHDNK--YVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVRVWDLRQPNNVGM---I-QLSGNKPIAAYDPE---- 359 (515)
Q Consensus 292 wd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~---~-~~~~~~~~~~~s~~---- 359 (515)
||+++++ ....+.+|...|.+++|+|+ +.+|++|+.|++|++||++.+..... + .+...+.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 9999873 56778899999999999998 77999999999999999987643221 1 23445788999997
Q ss_pred -------------CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC----CEEEEEECCCcEEEE
Q psy6127 360 -------------GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG----KLILVSTNGSIIRLF 422 (515)
Q Consensus 360 -------------~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~----~~l~~~s~dg~i~iw 422 (515)
+++|++|+.|++|++||++... ..........|...|.+++|+|++ ++|++++.|++|++|
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG--QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTS--CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCC--ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 4789999999999999996532 112334456788899999999986 899999999999999
Q ss_pred ECCCCc----eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 423 DAFNGN----CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 423 d~~~~~----~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
++.+.. ....+..+ ...|.+++|+|++++|++++.||.|++|+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~---~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKF---NDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ECSSTTCCCCBCCEEEEC---SSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EccCccccchhhhhhhcC---CCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 987631 12233333 4459999999999999999999999999975
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=293.55 Aligned_cols=284 Identities=17% Similarity=0.240 Sum_probs=224.5
Q ss_pred eCCCCcEEEEccceeeeeEeeeeccc-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEe
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFRE-NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFT 272 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~~-h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 272 (515)
+++.++.+++|+ ...++....+.. |...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+
T Consensus 108 ~~~~d~~v~lw~--~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 185 (401)
T 4aez_A 108 AVALERNVYVWN--ADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN 185 (401)
T ss_dssp EEEETTEEEEEE--TTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred EEECCCeEEEee--CCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC
Confidence 455678899999 666777766665 89999999999999999999999999999999999999999999999999995
Q ss_pred cCCCeEEEEEeeCCCeEEEEECC-CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCC
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLH-DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGN 350 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~-~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~ 350 (515)
+ ..++++ +.|+.|++||++ .+..+..+.+|.+.|.+++|+|++++|++|+.|+.|++||+++++....+ .+...
T Consensus 186 ~--~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 261 (401)
T 4aez_A 186 R--HVLSSG--SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA 261 (401)
T ss_dssp T--TEEEEE--ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC
T ss_pred C--CEEEEE--cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce
Confidence 4 444444 589999999998 56778888999999999999999999999999999999999999988877 45667
Q ss_pred eeEEEECCCCC-EEEEEE--CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE--CCCcEEEEECC
Q psy6127 351 KPIAAYDPEGL-AFAIGV--NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST--NGSIIRLFDAF 425 (515)
Q Consensus 351 ~~~~~~s~~~~-~l~~g~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s--~dg~i~iwd~~ 425 (515)
+.+++|+|++. .+++++ .|+.|++||++++. ..... .+...+.+++|+|+++++++++ .||.|++||+.
T Consensus 262 v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-----~~~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 262 VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-----RVNTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-----EEEEE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-----EEEEE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 99999999764 556654 69999999998754 22222 2456799999999999999954 89999999999
Q ss_pred CCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEE
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQ 490 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 490 (515)
+++...... ...+...|.+++|+|+|++|++++.||.|++|++.+++.+......+..+...+.
T Consensus 336 ~~~~~~~~~-~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~i~ 399 (401)
T 4aez_A 336 SSGLTKQVD-IPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPIPITKTPSSSIT 399 (401)
T ss_dssp TTEEEEEEE-EECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------------------
T ss_pred CccceeEEE-ecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccccccCCCcccee
Confidence 876655432 1224455999999999999999999999999999999887765442334444443
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=288.30 Aligned_cols=291 Identities=15% Similarity=0.181 Sum_probs=220.6
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eeeeEecCCCCceeEEEEec--CCCeEEEEEeeCCCe
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG----TSKNTINSKKYGVDLIKFTH--SKTTAIHASTKVDAT 288 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~s~~~d~~ 288 (515)
..+.+|.+.|++++|+|++++||+|+.||.|++||+.++ +....+.+|...|.+++|+| ++..+++++ .|+.
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~--~dg~ 82 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS--YDKT 82 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE--TTSC
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc--CCCe
Confidence 457899999999999999999999999999999999876 46677889999999999999 477666554 7999
Q ss_pred EEEEECCCC---------eeeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCCeEEEE------------
Q psy6127 289 LRYLSLHDN---------KYVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVRVWDLRQPNNVGMI------------ 345 (515)
Q Consensus 289 v~vwd~~~~---------~~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~------------ 345 (515)
|++||++++ +.+..+.+|...|.+++|+|+ ++++++++.||.|++||+++++.+..+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999887 667888999999999999999 999999999999999999987754332
Q ss_pred --ecCCCeeEEEECCC---CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC----CEEEEEECC
Q psy6127 346 --QLSGNKPIAAYDPE---GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG----KLILVSTNG 416 (515)
Q Consensus 346 --~~~~~~~~~~~s~~---~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~----~~l~~~s~d 416 (515)
.+...+.+++|+|+ +..+++++.++.+.+|+..... .........|...|++++|+|++ ++|++++.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK---LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC---EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc---eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 23445789999997 9999999999999777766543 12244456788899999999998 899999999
Q ss_pred CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE----eCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEEC
Q psy6127 417 SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG----STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 417 g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg----s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 492 (515)
|.|++||++++........... .......++....++.+ .....+.+|+....+++..+.+ |.+.|++++|+
T Consensus 240 g~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s 315 (351)
T 3f3f_A 240 GRIRIFKITEKLSPLASEESLT---NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD-HNGEVWSVSWN 315 (351)
T ss_dssp SCEEEEEEEECC------------------------------------------CCSEEEEEEEEECT-TSSCEEEEEEC
T ss_pred CeEEEEeCCCCcCccccCCccc---ceeccCCCcccccccccccccccceeeeecccccccEEEEEec-ccccEEEEEEc
Confidence 9999999987755443332211 13334444444444433 3445567777777888888988 99999999999
Q ss_pred CCCCEEEEeeCC--EEEEcCCCCC
Q psy6127 493 PKYHMLASACSN--MAFWIPTLSA 514 (515)
Q Consensus 493 p~~~~las~~~d--v~iW~~~~~~ 514 (515)
|++++|++++.| +++|+++...
T Consensus 316 ~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 316 LTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SSSCCEEEEETTSCEEEEEECTTS
T ss_pred CCCCEEEEecCCCcEEEEecCcCc
Confidence 999999999865 9999998653
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=290.57 Aligned_cols=257 Identities=15% Similarity=0.194 Sum_probs=216.7
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeeeeEecCCCCceeEEEEecC--CCeEEEEEeeCCC
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE--QGTSKNTINSKKYGVDLIKFTHS--KTTAIHASTKVDA 287 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~~~d~ 287 (515)
++...+++|.+.|++++|+|++++||+|+.||.|++||+. +++....+.+|...|.+++|+++ +..+++++ .|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~--~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec--cCC
Confidence 5667889999999999999999999999999999999998 56777889999999999999987 77666554 799
Q ss_pred eEEEEECCCCe--eeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCCeE---EEEecCCCeeEEEECC--
Q psy6127 288 TLRYLSLHDNK--YVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVRVWDLRQPNNV---GMIQLSGNKPIAAYDP-- 358 (515)
Q Consensus 288 ~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~s~-- 358 (515)
.|++||+.+++ .+..+.+|...|.+++|+|+ +++|++++.|+.|++||++++... ....+...+.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999987 77888899999999999999 899999999999999999987432 2235566799999999
Q ss_pred -----------CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC---CCEEEEEECCCcEEEEEC
Q psy6127 359 -----------EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD---GKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 359 -----------~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~---~~~l~~~s~dg~i~iwd~ 424 (515)
++..+++++.||.|++||++..... .........|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc-eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 6999999999999999999875422 1222334568889999999999 899999999999999999
Q ss_pred CCCcee--EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 425 FNGNCV--QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 425 ~~~~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
+++... ..+.....+...+.+++|+|+|++|++++.||.|++|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 887422 22222333556699999999999999999999999999873
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=289.38 Aligned_cols=288 Identities=12% Similarity=0.090 Sum_probs=233.6
Q ss_pred CceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE--eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy6127 171 PHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR--VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIY 248 (515)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~--~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iw 248 (515)
|...+.++.+.+... +.++++.++.+++|+ ....+ +...+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 7 ~~~~i~~~~~s~~~~-----~l~~~~~d~~v~i~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRT-----QIAICPNNHEVHIYE--KSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSS-----EEEEECSSSEEEEEE--EETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCC-----EEEEEeCCCEEEEEe--CCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 444566666665432 233667788999999 55554 889999999999999999999999999999999999
Q ss_pred ECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee----eEEecCCCCCeEEEEEcCCCCEE
Q psy6127 249 DCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY----VRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 249 d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
|+.+++.... +..|...|.+++|+|+++.+++++ .|+.|++||++.++. .....+|...|.+++|+|++++|
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE--TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe--CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE
Confidence 9988875444 467889999999999998877765 799999999988762 33346789999999999999999
Q ss_pred EEEeCCCcEEEEEcC------------------CCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC
Q psy6127 323 ISGSYDKTVRVWDLR------------------QPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG 383 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~------------------~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~ 383 (515)
++++.||.|++||++ .++.+..+ .+...+.+++|+|+++++++++.|+.|++||+++.+
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-- 235 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM-- 235 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT--
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--
Confidence 999999999999954 56777777 455679999999999999999999999999999865
Q ss_pred CceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC--Cce--eEE---------------------------
Q psy6127 384 PFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN--GNC--VQS--------------------------- 432 (515)
Q Consensus 384 ~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~--~~~--~~~--------------------------- 432 (515)
.......+...+.+++|+|++++++++ .|+.|++|++.+ ++. ...
T Consensus 236 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
T 1k8k_C 236 ---AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASS 311 (372)
T ss_dssp ---EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--
T ss_pred ---eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccc
Confidence 333344667789999999999988877 999999999987 421 100
Q ss_pred -------eeccccCCCCCEEEEEe-cCC---CEEEEEeCCCcEEEEECCCCe
Q psy6127 433 -------LSGVLNNNASPLEATFT-PDS---QFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 433 -------~~~~~~~~~~i~~~~~s-p~g---~~l~sgs~dg~I~iwd~~~~~ 473 (515)
......|...|++++|+ ++| ++|++|+.||.|++||+.+++
T Consensus 312 ~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 312 EGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp -------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 11112456679999966 666 999999999999999987654
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=277.74 Aligned_cols=249 Identities=14% Similarity=0.245 Sum_probs=204.7
Q ss_pred eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC--CeeeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEE
Q psy6127 257 NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD--NKYVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVR 332 (515)
Q Consensus 257 ~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~--~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~ 332 (515)
..+.+|...|.+++|+|+++.+++++ .|++|++||+.+ .+.+.++.+|.++|.+++|+|+ +++|++|+.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s--~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEE--TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEe--CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 45778999999999999999877665 799999999974 4678899999999999999864 88999999999999
Q ss_pred EEEcCCCC--eEEEE-ecCCCeeEEEECCC--CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-
Q psy6127 333 VWDLRQPN--NVGMI-QLSGNKPIAAYDPE--GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD- 406 (515)
Q Consensus 333 iwd~~~~~--~~~~~-~~~~~~~~~~~s~~--~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~- 406 (515)
+||+++++ .+..+ .+...+.+++|+|+ +.+|++++.|++|++||++...... ......|...|.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~---~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS---PIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC---CEEEECCSSCEEEEEECCCC
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee---eeeeecccCccceEeecCCc
Confidence 99999874 34444 35567999999997 8999999999999999998753211 1223467788999999997
Q ss_pred ------------CCEEEEEECCCcEEEEECCCCc----eeEEeeccccCCCCCEEEEEecCC---CEEEEEeCCCcEEEE
Q psy6127 407 ------------GKLILVSTNGSIIRLFDAFNGN----CVQSLSGVLNNNASPLEATFTPDS---QFVASGSTDGQVHIW 467 (515)
Q Consensus 407 ------------~~~l~~~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~~i~~~~~sp~g---~~l~sgs~dg~I~iw 467 (515)
+++|++|+.|++|++||+++++ ....+.+| ...|.+++|+|++ .+|++++.|++|++|
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H---~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH---SDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC---SSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC---CCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 5799999999999999998776 44555554 4459999999985 899999999999999
Q ss_pred ECCCCe---EEEEEc-CCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 468 NAERGY---KVCVLD-GDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 468 d~~~~~---~~~~~~-~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
|+.++. ....+. ..|...|++++|+|++++||+++.| +++|+....
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred EeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 997642 222331 2388899999999999999999865 999998754
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-35 Score=295.33 Aligned_cols=275 Identities=19% Similarity=0.353 Sum_probs=234.1
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
+....+|...|.+++| ++++|++|+.||.|++||..+++....+.+|...|.+++| +++.++++ +.||.|++||
T Consensus 126 ~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg--~~dg~i~vwd 199 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITG--SSDSTVRVWD 199 (435)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEE--ETTSCEEEEE
T ss_pred EecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEE--cCCCeEEEEE
Confidence 3445678888999987 7899999999999999999999999999999999999999 56665554 4799999999
Q ss_pred CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE---EE-ecCCCeeEEEECCCCCEEEEEECC
Q psy6127 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG---MI-QLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~---~~-~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
+.+++.+..+.+|...|.+++|+ +..+++|+.||.|++||+++++... .+ .+...+.++++ +++++++|+.|
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 99999999999999999999997 4699999999999999999887652 33 34556777777 88999999999
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
|.|++||+++++ .......|...+.++.| +++++++|+.||.|++||+++++++..+.+|.. .+.+++|
T Consensus 276 g~i~vwd~~~~~-----~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~~~~- 344 (435)
T 1p22_A 276 RTIKVWNTSTCE-----FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE---LVRCIRF- 344 (435)
T ss_dssp SEEEEEETTTCC-----EEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSS---CEEEEEC-
T ss_pred CeEEEEECCcCc-----EEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC---cEEEEEe-
Confidence 999999998764 34444567788999998 467999999999999999999999998887544 4888888
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCe---------EEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGY---------KVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~---------~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
++.++++|+.||.|++||+.+++ ++..+.+ |.+.|++++| ++.++++++.| +++|++...
T Consensus 345 -~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 345 -DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE-HSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp -CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC-CSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred -cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccC-CCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 78999999999999999997766 8888887 9999999999 67788988855 999998754
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=300.57 Aligned_cols=300 Identities=15% Similarity=0.143 Sum_probs=223.4
Q ss_pred ccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCe
Q psy6127 166 SSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQ 244 (515)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~ 244 (515)
....+|...|.+++|.|..... | ++++.|+.|++||-..........+.+|.+.|++++|+| ++++|++|+.||+
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~---l-asGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPST---V-AVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTC---E-EEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred ccCCCCCCCEEEEEEeCCCCCE---E-EEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 3444555568888887644322 3 478889999999943334445567789999999999998 7899999999999
Q ss_pred EEEEECCCCeeeeEecC--CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-E
Q psy6127 245 IIIYDCEQGTSKNTINS--KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-S 321 (515)
Q Consensus 245 i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~ 321 (515)
|++||++++........ +...+.+++|+|++..++++ +.||.|++||++ ++.+..+.+|...|.+++|+|+++ +
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTG--DNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEE--CSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEE--eCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceE
Confidence 99999987655443333 34567899999999877655 479999999986 456778899999999999999986 7
Q ss_pred EEEEeCCCcEEEEEcCCCCeEEEE----ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-CCCCCc
Q psy6127 322 FISGSYDKTVRVWDLRQPNNVGMI----QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-PGERGC 396 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~ 396 (515)
+++|+.|++|++||+++.+....+ .+...+.+++|+|+|++|++++.||.|++||++++.......... ......
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 345 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHL 345 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSS
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccc
Confidence 889999999999999887654333 455679999999999999999999999999998754211110000 001111
Q ss_pred CeEEEEEcCCCCEEEEEE------------CCCcEEEEECCCCceeEEeeccccCCCCCEEE-EEecCCCEEEEEeCCCc
Q psy6127 397 EWTGLKFSPDGKLILVST------------NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA-TFTPDSQFVASGSTDGQ 463 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~-~~sp~g~~l~sgs~dg~ 463 (515)
.+....|+|++.+++++. .++.|++||..+++.+..+..+ +...|.++ +|+|+|++|++|+ |+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~--~~~~v~s~~~fspdg~~lasg~-d~~ 422 (435)
T 4e54_B 346 TPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP--ESSGISSLNEFNPMGDTLASAM-GYH 422 (435)
T ss_dssp CCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS--SCCCCCCEEEECTTSSCEEEEC-SSE
T ss_pred eeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC--CCCcEEEEEEECCCCCEEEEEc-CCc
Confidence 223456777777766654 3457999999999988877542 33347776 6999999999876 789
Q ss_pred EEEEECCCCeEE
Q psy6127 464 VHIWNAERGYKV 475 (515)
Q Consensus 464 I~iwd~~~~~~~ 475 (515)
|+|||+++++..
T Consensus 423 i~iW~~~~gk~r 434 (435)
T 4e54_B 423 ILIWSQQEARTR 434 (435)
T ss_dssp EEECCCC-----
T ss_pred EEEEECCcCeee
Confidence 999999988753
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=289.04 Aligned_cols=285 Identities=14% Similarity=0.120 Sum_probs=217.0
Q ss_pred eEEEEEEeeccccceeeeeeeCCC------CcEEEEccceeeee----------EeeeeccccCCcEEEEEEcCCCCEEE
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSS------RTITKCSENLVRSY----------RVAKVFRENTDKINSLDYSSDGSLLI 237 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~------~~~i~~wd~~~~~~----------~~~~~~~~h~~~I~~l~~spd~~~la 237 (515)
+|++++|.+.... |+..+++ +..+++|+ +... .....+.+|...|.+++++ ++.++
T Consensus 16 PV~sv~fs~dg~~----l~sGGg~~~~sGi~N~i~~w~--~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~ 87 (365)
T 4h5i_A 16 PAYGAKFLNNDTL----LVAGGGGEGNNGIPNKLTVLR--VDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIIL 87 (365)
T ss_dssp CEEEEEEEETTEE----EEEEECCSSSSSCCEEEEEEE--ECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEE
T ss_pred CEEEEEEeCCCcE----EEEECCCccccCCCCEEEEEE--EcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEE
Confidence 4777777665432 3322221 23588887 3211 1123578999999998775 44666
Q ss_pred EE-----------eCCCeEEEEECCCCeeee----Ee-----cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 238 SC-----------SDDDQIIIYDCEQGTSKN----TI-----NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 238 sg-----------s~dg~i~iwd~~~~~~~~----~~-----~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
+| +.|+++++|++.+..... .. ..+...+.+++|+|||+.+++++++.|++|++||++++
T Consensus 88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 65 457789999987543221 11 23345689999999999999999889999999999999
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE---ecCCCeeEEEECCCCCEEEEEECCC----
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI---QLSGNKPIAAYDPEGLAFAIGVNSD---- 370 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg---- 370 (515)
+++..+. |...|.+++|+|||+++++++. +.+.+|+..+++..... .+...+.+++|+|+++.+++++.++
T Consensus 168 ~~~~~~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 168 TEKFEIE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp EEEEEEE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred cEEEEeC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 9998886 7788999999999999999885 55677777777766543 2344588999999999999999887
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEe-eccccCCCCCEEEEEe
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSL-SGVLNNNASPLEATFT 449 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~i~~~~~s 449 (515)
.++.|++........ .......|...|++++|+|+|++|++|+.|++|++||+++++++..+ .+| ...|++++|+
T Consensus 246 ~i~~~~~~~~~~~~~-~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH---~~~V~~v~fS 321 (365)
T 4h5i_A 246 VLTKISIKSGNTSVL-RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH---SFAITEVTIS 321 (365)
T ss_dssp EEEEEEEETTEEEEE-EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS---SSCEEEEEEC
T ss_pred EEeecccccceecce-eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc---cCCEEEEEEC
Confidence 688888876432111 12223467778999999999999999999999999999999998875 454 4459999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
|||++|++|+.|++|+|||+..+
T Consensus 322 pdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 322 PDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999653
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=289.98 Aligned_cols=277 Identities=17% Similarity=0.235 Sum_probs=221.2
Q ss_pred CcEEEEccceeeeeEeeeec--cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCC
Q psy6127 198 RTITKCSENLVRSYRVAKVF--RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~--~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 275 (515)
|..|++|| ..++++.+.+ .+|...|++++|+|+|++||+|+.||+|++||+.+++.+..+.+|...+.++++++
T Consensus 124 d~tV~lWd--~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~-- 199 (420)
T 4gga_A 124 DNSVYLWS--ASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS-- 199 (420)
T ss_dssp TTEEEEEE--TTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--
T ss_pred CCEEEEEE--CCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC--
Confidence 67899999 7777777655 57888999999999999999999999999999999999999999999999988864
Q ss_pred CeEEEEEeeCCCeEEEEECCCC-eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe----EE-EEecCC
Q psy6127 276 TTAIHASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN----VG-MIQLSG 349 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~----~~-~~~~~~ 349 (515)
..++ +++.|+.+++||.... ..+..+.+|...+..+.|+|+++.+++++.|+.+++||..+++. +. ...+..
T Consensus 200 ~~l~--sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~ 277 (420)
T 4gga_A 200 YILS--SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG 277 (420)
T ss_dssp TEEE--EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS
T ss_pred CEEE--EEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC
Confidence 4444 4468999999998764 45678899999999999999999999999999999999987753 22 235556
Q ss_pred CeeEEEECCCCC-EEEEE--ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE--CCCcEEEEEC
Q psy6127 350 NKPIAAYDPEGL-AFAIG--VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST--NGSIIRLFDA 424 (515)
Q Consensus 350 ~~~~~~~s~~~~-~l~~g--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s--~dg~i~iwd~ 424 (515)
.+.+++|+|.+. .++++ +.|++|++||++++. ..... .....+.++.|+|+++.+++++ .|+.|++||+
T Consensus 278 ~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-----~~~~~-~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 278 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-----CLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-----EEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-----cceee-ccccceeeeeecCCCCeEEEEEecCCCEEEEEEC
Confidence 789999999654 55554 479999999998754 22222 2334688999999999998876 7899999999
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEE
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQ 490 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 490 (515)
.+++++..+.+|.. .|.+++|+|+|++|++|+.||+|+|||+.+..+...... +...+....
T Consensus 352 ~~~~~v~~l~gH~~---~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~-~~~~~~~~s 413 (420)
T 4gga_A 352 PTMAKVAELKGHTS---RVLSLTMSPDGATVASAAADETLRLWRCFELDPARRRER-EKASAAKSS 413 (420)
T ss_dssp TTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---------------
T ss_pred CCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhh-ccCCccccc
Confidence 99999999988654 499999999999999999999999999987666555544 444433333
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=308.46 Aligned_cols=316 Identities=9% Similarity=0.014 Sum_probs=224.4
Q ss_pred hhheeecccccccccccCCCCcCCCcchhhcccc----ccccCCceeEEEEEEeeccccc-eeeeeeeCCCCcEEEEccc
Q psy6127 132 LKIVAKSENMCNLTKLDLPYNKLGSWDFELLHSL----SSLESPHFVSLFVTFVSRVLTM-AASLAHSRSSRTITKCSEN 206 (515)
Q Consensus 132 ~~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~-~~~l~~s~~~~~~i~~wd~ 206 (515)
.+++|+++.++.| ++||+.+++.. .++.+|...+..++|.+..... ...+.++++.|+.+++|+
T Consensus 173 ~~~laS~s~D~tI----------~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd- 241 (524)
T 2j04_B 173 LEMFDKEKHSSCI----------QIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLE- 241 (524)
T ss_dssp ---------CEEE----------EEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEE-
T ss_pred hhhhccCCCCceE----------EEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEE-
Confidence 3567778888888 99999887643 3355555557778887752100 011344788899999998
Q ss_pred eeeeeE-----------eeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-eeeEecCCCCceeEE--EEe
Q psy6127 207 LVRSYR-----------VAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-SKNTINSKKYGVDLI--KFT 272 (515)
Q Consensus 207 ~~~~~~-----------~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~--~~~ 272 (515)
+...+ +..++.+|...|++++|+|++ .||+|+.||+|++||+.++. +...+.+|...|.++ +|+
T Consensus 242 -~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s 319 (524)
T 2j04_B 242 -IIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYS 319 (524)
T ss_dssp -CCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECC
T ss_pred -cCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcC
Confidence 44332 234788999999999999865 89999999999999999764 456689999999999 567
Q ss_pred cCC-CeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecC
Q psy6127 273 HSK-TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR--KVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLS 348 (515)
Q Consensus 273 ~~~-~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~ 348 (515)
|++ ..++++ +.|++|++||++++++...+.+|.. .|.+++|+|+++.+++++.|++|++||++++.+...+ .+.
T Consensus 320 ~~g~~~laS~--S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~ 397 (524)
T 2j04_B 320 DFEDTVVSTV--AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE 397 (524)
T ss_dssp TTSCCEEEEE--ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS
T ss_pred CCCCeEEEEe--ccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC
Confidence 776 545444 5899999999999888777777754 5889999999999999999999999999999876655 566
Q ss_pred CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC-
Q psy6127 349 GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF- 425 (515)
Q Consensus 349 ~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~- 425 (515)
..+.+++|+|+++.|++|+.||+|++||+.... ...... ...+...+.+++|+|+++.+. ... .+.+|+..
T Consensus 398 ~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~---~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~ 471 (524)
T 2j04_B 398 TTITAIGVSRLHPMVLAGSADGSLIITNAARRL---LHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTV 471 (524)
T ss_dssp SCEEEEECCSSCCBCEEEETTTEEECCBSCSST---TTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC---
T ss_pred CceEEEEeCCCCCeEEEEECCCEEEEEechHhh---ccccccCccceeeeEEEEeccCCCCCeEE-ccC--Cceeccccc
Confidence 779999999999999999999999999986521 111000 011222467899999998552 222 23344332
Q ss_pred CCceeEEeeccccCCCCCEEEEEecCCC---EEEEEeCCCcEEEEECCC
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTPDSQ---FVASGSTDGQVHIWNAER 471 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~---~l~sgs~dg~I~iwd~~~ 471 (515)
++.++..+.+|. ..|.+++|+|++. ++|+|+.||.|+||++.-
T Consensus 472 ~g~~~~~l~gh~---~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 472 NDVSKAKIDAHG---INITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ----------CC---CSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred CCcceeeecCCC---ceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 466666776654 4499999999964 999999999999999863
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=298.25 Aligned_cols=299 Identities=11% Similarity=0.094 Sum_probs=236.2
Q ss_pred Ccchhhccccccc-cCCceeEEEEEEee-ccccceeeeeeeCCCCcEEEEccceeee------eEeeeeccccCCcEEEE
Q psy6127 156 SWDFELLHSLSSL-ESPHFVSLFVTFVS-RVLTMAASLAHSRSSRTITKCSENLVRS------YRVAKVFRENTDKINSL 227 (515)
Q Consensus 156 ~wd~~~~~~l~~~-~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~~~~i~~wd~~~~~------~~~~~~~~~h~~~I~~l 227 (515)
.|+ .+++.+.++ ++|...|.++.+.+ ... +.++++.|+.+++|+ +.. .++...+ +|.+.|+++
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~-----~l~s~s~dg~v~vwd--~~~~~~~~~~~~~~~~-~h~~~v~~~ 117 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETP-----YLITGSDQGVIKIWN--LKEIIVGEVYSSSLTY-DCSSTVTQI 117 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSC-----EEEEEETTSEEEEEE--HHHHHTTCCCSCSEEE-ECSSCEEEE
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCC-----EEEEecCCceEEEeE--CcccccCcccceeeec-cCCCCEEEE
Confidence 588 568888888 77777788888877 432 334788999999998 444 2223333 599999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECC---CCeeeeEecC------------CCCceeEEE--EecCCCeEEEEEeeCCCeEE
Q psy6127 228 DYSSDGSLLISCSDDDQIIIYDCE---QGTSKNTINS------------KKYGVDLIK--FTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 228 ~~spd~~~lasgs~dg~i~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~s~~~d~~v~ 290 (515)
+|+|++++|++|+.||+|++||+. +++....+.. +...+.++. +++++..++++ +.|+.|+
T Consensus 118 ~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~d~~i~ 195 (437)
T 3gre_A 118 TMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL--TNLSRVI 195 (437)
T ss_dssp EECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE--ETTSEEE
T ss_pred EEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE--eCCCeEE
Confidence 999999999999999999999994 4544443322 445666666 34566555544 4799999
Q ss_pred EEECCCCeeeEEecC--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe--cCCCeeEEEEC----CCCCE
Q psy6127 291 YLSLHDNKYVRYFPG--HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKPIAAYD----PEGLA 362 (515)
Q Consensus 291 vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~s----~~~~~ 362 (515)
+||+++++.+..+.+ |.+.|++++|+|++++|++|+.||.|++||+++++.+..+. +...+.+++|+ |++.+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 196 IFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp EEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred EEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE
Confidence 999999999999988 89999999999999999999999999999999999988874 34467888555 56889
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeec---------------------CC--CCCcCeEEEEEcCCCCEEEEEECCCcE
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKC---------------------PG--ERGCEWTGLKFSPDGKLILVSTNGSII 419 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~---------------------~~--~~~~~i~~l~~sp~~~~l~~~s~dg~i 419 (515)
+++|+.||.|++||+++++.. ..+.. .. .|...|++++|+ ++++|++++.|+.|
T Consensus 276 l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i 352 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGHCQ--YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI 352 (437)
T ss_dssp EEEESTTEEEEEEETTTTEEE--EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred EEEEcCCCcEEEEEcCCCcEE--EEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence 999999999999999864311 11110 01 266779999999 77899999999999
Q ss_pred EEEECCCCceeEEeeccc----------------------------------cCCCCCEEEEEecC--CCEEEEEeCCCc
Q psy6127 420 RLFDAFNGNCVQSLSGVL----------------------------------NNNASPLEATFTPD--SQFVASGSTDGQ 463 (515)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~----------------------------------~~~~~i~~~~~sp~--g~~l~sgs~dg~ 463 (515)
++||+.++++...+.++. .+...|.+++|+++ +.+|++|+.||.
T Consensus 353 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 353 VMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp EEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred EEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCce
Confidence 999999998887777531 15566999999998 789999999999
Q ss_pred EEEEE
Q psy6127 464 VHIWN 468 (515)
Q Consensus 464 I~iwd 468 (515)
|+||+
T Consensus 433 I~iw~ 437 (437)
T 3gre_A 433 IGIFQ 437 (437)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99995
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=291.88 Aligned_cols=291 Identities=17% Similarity=0.271 Sum_probs=229.7
Q ss_pred CCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy6127 170 SPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYD 249 (515)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd 249 (515)
+|...+.+++++++. + ++++.++.+++|| ..++++...+.+|.+.|.+++| ++++|++|+.||+|++||
T Consensus 131 ~~~~~v~~~~~d~~~------l-~~g~~dg~i~iwd--~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 131 ETSKGVYCLQYDDQK------I-VSGLRDNTIKIWD--KNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 199 (435)
T ss_dssp SSCCCEEEEECCSSE------E-EEEESSSCEEEEE--SSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEECCCE------E-EEEeCCCeEEEEe--CCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEE
Confidence 444458888886553 3 3677889999999 7888999999999999999999 788999999999999999
Q ss_pred CCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee---EEecCCCCCeEEEEEcCCCCEEEEEe
Q psy6127 250 CEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV---RYFPGHVRKVSSLNLSPVDDSFISGS 326 (515)
Q Consensus 250 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~---~~~~~h~~~v~~l~~~~~~~~l~s~s 326 (515)
+.+++.+..+.+|...|.+++|++ ..+++ ++.|+.|++||+.+++.. ..+.+|...|.+++| +++++++|+
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s--~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~ 273 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFNN--GMMVT--CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS 273 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECCT--TEEEE--EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred CCCCcEEEEEcCCCCcEEEEEEcC--CEEEE--eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe
Confidence 999999999999999999999974 34444 358999999999987765 678899999999999 588999999
Q ss_pred CCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC
Q psy6127 327 YDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP 405 (515)
Q Consensus 327 ~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp 405 (515)
.||.|++||+++++.+..+. +...+.++.+ +++.+++|+.||.|++||++++. .......|...|.+++|
T Consensus 274 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~~~~-- 344 (435)
T 1p22_A 274 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA-----CLRVLEGHEELVRCIRF-- 344 (435)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC-----EEEEECCCSSCEEEEEC--
T ss_pred CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCC-----EEEEEeCCcCcEEEEEe--
Confidence 99999999999999998885 4456777777 57899999999999999998864 44445678889999998
Q ss_pred CCCEEEEEECCCcEEEEECCCCc---------eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy6127 406 DGKLILVSTNGSIIRLFDAFNGN---------CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVC 476 (515)
Q Consensus 406 ~~~~l~~~s~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~ 476 (515)
+++++++|+.||.|++||+.++. ++..+..|.. .|.+++| ++++|++|+.||.|++||+.++....
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG---RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS---CCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC---CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 78899999999999999987665 6777766544 4889999 68899999999999999998876655
Q ss_pred EEcCCCCCCeEEEEECC
Q psy6127 477 VLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 477 ~~~~~h~~~V~~l~~sp 493 (515)
... ...+..++.|.+
T Consensus 420 ~~~--~~~~~~~~~~~~ 434 (435)
T 1p22_A 420 AEP--PRSPSRTYTYIS 434 (435)
T ss_dssp -----------------
T ss_pred cCC--CCCCccceeeec
Confidence 444 334555666544
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=294.23 Aligned_cols=284 Identities=13% Similarity=0.169 Sum_probs=215.0
Q ss_pred EEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee--EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy6127 175 SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY--RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ 252 (515)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~--~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~ 252 (515)
+.++.|.+... +.++++.++.+++|+ .... ++...+.+|.+.|++++|+|++++|++|+.|++|++||+.+
T Consensus 14 v~~~~~s~~g~-----~l~~~~~d~~i~iw~--~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 14 SYEHAFNSQRT-----EFVTTTATNQVELYE--QDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp CSCCEECSSSS-----EEECCCSSSCBCEEE--EETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EEEEEECCCCC-----EEEEecCCCEEEEEE--ccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 44455554332 334677889999999 6555 88899999999999999999999999999999999999998
Q ss_pred Ce---eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe---eeEEecC-CCCCeEEEEEcCCCCEEEEE
Q psy6127 253 GT---SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK---YVRYFPG-HVRKVSSLNLSPVDDSFISG 325 (515)
Q Consensus 253 ~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~---~~~~~~~-h~~~v~~l~~~~~~~~l~s~ 325 (515)
++ ....+..|...|.+++|+|+++.+++++ .|+.|++||+++++ ....+.+ |...|.+++|+|++++|+++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS--GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEE--SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEe--cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 77 6777888999999999999999887665 79999999999887 3677777 99999999999999999999
Q ss_pred eCCCcEEEEEcCC------------------CCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCcee
Q psy6127 326 SYDKTVRVWDLRQ------------------PNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFAS 387 (515)
Q Consensus 326 s~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 387 (515)
+.|+.|++||++. ++.+..+.+...+.+++|+|++++|++++.||.|++||+++....+ ..
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~-~~ 243 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP-RA 243 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE-EE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc-ee
Confidence 9999999999963 3344444566679999999999999999999999999999865311 11
Q ss_pred eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--ee----------------------------------E
Q psy6127 388 FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN--CV----------------------------------Q 431 (515)
Q Consensus 388 ~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~--~~----------------------------------~ 431 (515)
......|...|.+++|+|++++|++++.++.+ +|+..... .. .
T Consensus 244 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (377)
T 3dwl_C 244 LITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRS 322 (377)
T ss_dssp CCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----------
T ss_pred eEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccc
Confidence 33345677889999999999999988766655 66654211 00 0
Q ss_pred Eeec-------------cccCCCCCEEEEEecCC-C---EEEEEeCCCcEEEEEC
Q psy6127 432 SLSG-------------VLNNNASPLEATFTPDS-Q---FVASGSTDGQVHIWNA 469 (515)
Q Consensus 432 ~~~~-------------~~~~~~~i~~~~~sp~g-~---~l~sgs~dg~I~iwd~ 469 (515)
.+.. ...|...|+++++.+.+ . .+++|+.||.|++||+
T Consensus 323 ~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 323 TFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp --------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0100 01155568999876643 3 6999999999999985
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=289.92 Aligned_cols=280 Identities=13% Similarity=0.180 Sum_probs=228.4
Q ss_pred EEEEEEcCCCCE-EEEEeCCCeEEEEECCCCe----eeeEecCCCCceeEEEEec-CCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 224 INSLDYSSDGSL-LISCSDDDQIIIYDCEQGT----SKNTINSKKYGVDLIKFTH-SKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 224 I~~l~~spd~~~-lasgs~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
...++++|+... +++++.||.|++|++.+.. ....+.+|...|.+++|+| ++..+++++ .|+.|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s--~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS--EDCTVMVWEIPDG 114 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE--TTSEEEEEECCTT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe--CCCeEEEEEccCC
Confidence 446888887654 4457889999999996542 3456788999999999999 777666554 7999999999988
Q ss_pred -------eeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCeEEEEe---cCCCeeEEEECCCCCEEEEE
Q psy6127 298 -------KYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPNNVGMIQ---LSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 298 -------~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~g 366 (515)
+++..+.+|...|.+++|+|++ +.|++++.|+.|++||+++++.+..+. +...+.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 6678889999999999999998 699999999999999999999988872 55679999999999999999
Q ss_pred ECCCcEEEEEeecCCCCCceeeecC-CCCCc-CeEEEEEcCCCCEEEEE---ECCCcEEEEECCCCce-eEEeeccccCC
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCP-GERGC-EWTGLKFSPDGKLILVS---TNGSIIRLFDAFNGNC-VQSLSGVLNNN 440 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~-~i~~l~~sp~~~~l~~~---s~dg~i~iwd~~~~~~-~~~~~~~~~~~ 440 (515)
+.||.|++||+++++ ..... ..|.. .+.+++|+|+++++++| +.|+.|++||+++++. ...... .+.
T Consensus 195 ~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~ 267 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGT-----VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL--DTS 267 (402)
T ss_dssp ETTSEEEEEETTTTE-----EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC--CCC
T ss_pred ecCCcEEEEeCCCCc-----eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec--cCC
Confidence 999999999998754 22222 34443 47899999999999999 7899999999998765 222221 233
Q ss_pred CCCEEEEEecCCCEEEE-EeCCCcEEEEECCCCeE-EEEEcC-CCCCCeEEEEECCCCCEEEEeeCCEEEEcCCC
Q psy6127 441 ASPLEATFTPDSQFVAS-GSTDGQVHIWNAERGYK-VCVLDG-DHPSAVQSLQFNPKYHMLASACSNMAFWIPTL 512 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~s-gs~dg~I~iwd~~~~~~-~~~~~~-~h~~~V~~l~~sp~~~~las~~~dv~iW~~~~ 512 (515)
..+.+++|+|++++|++ |+.||.|++||+.+++. +..+.. .|..+|++++|+|++.+++++++.+++|++..
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHE 342 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEET
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCC
Confidence 44899999999999975 55799999999998873 333332 25689999999999999998888899999864
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=286.39 Aligned_cols=277 Identities=15% Similarity=0.172 Sum_probs=229.0
Q ss_pred eeeeCCCCcEEEEcccee--eeeEeeeeccccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-------eeeeEec
Q psy6127 191 LAHSRSSRTITKCSENLV--RSYRVAKVFRENTDKINSLDYSS-DGSLLISCSDDDQIIIYDCEQG-------TSKNTIN 260 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~--~~~~~~~~~~~h~~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~-------~~~~~~~ 260 (515)
+.++++.++.+.+|+-.. +..+....+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ +.+..+.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 128 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE 128 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec
Confidence 334677888899998311 11134567889999999999999 9999999999999999999987 6678899
Q ss_pred CCCCceeEEEEecCCC-eEEEEEeeCCCeEEEEECCCCeeeEEe--cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy6127 261 SKKYGVDLIKFTHSKT-TAIHASTKVDATLRYLSLHDNKYVRYF--PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337 (515)
Q Consensus 261 ~~~~~v~~~~~~~~~~-~l~~~s~~~d~~v~vwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~ 337 (515)
+|...|.+++|+|++. .++++ +.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.||.|++||++
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSA--GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEE--ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred CCCCeEEEEEECcCCCCEEEEE--cCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 9999999999999985 45444 47999999999999999999 8899999999999999999999999999999999
Q ss_pred CCCeEEEE-ecC-CC-eeEEEECCCCCEEEEE---ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 338 QPNNVGMI-QLS-GN-KPIAAYDPEGLAFAIG---VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 338 ~~~~~~~~-~~~-~~-~~~~~~s~~~~~l~~g---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
+++.+..+ ..+ .. +..+.|+|+++++++| +.|+.|++||++...... ... ...+...+.+++|+|++++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~-~~~--~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 207 KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL-SLQ--ELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-EEE--ECCCCSSCEEEEEETTTTEEE
T ss_pred CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-eEE--eccCCCceeEEEEcCCCCEEE
Confidence 99988887 333 32 7889999999999999 689999999998865311 111 224556789999999999997
Q ss_pred EE-ECCCcEEEEECCCCce-eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE
Q psy6127 412 VS-TNGSIIRLFDAFNGNC-VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV 475 (515)
Q Consensus 412 ~~-s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~ 475 (515)
++ +.|+.|++||+.+++. +..+..+. +...+.+++|+|++.++++ .++.+++|++.++++.
T Consensus 284 ~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 284 LCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp EEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred EEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 55 4799999999999884 55665554 4556999999999998774 5679999999887643
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=278.10 Aligned_cols=248 Identities=17% Similarity=0.256 Sum_probs=198.3
Q ss_pred EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe--eeEEecCCCCCeEEEEEcC--CCCEEEEEeCCCcEEE
Q psy6127 258 TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNLSP--VDDSFISGSYDKTVRV 333 (515)
Q Consensus 258 ~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~--~~~~l~s~s~dg~i~i 333 (515)
.+.+|...|.+++|+|+++.+++++ .|++|++||+.+++ .+..+.+|.+.|.+++|+| ++++|++|+.|++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 4568999999999999999877664 79999999998875 4678899999999999986 4889999999999999
Q ss_pred EEcCCCC--eEEEE-ecCCCeeEEEECCC--CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC--
Q psy6127 334 WDLRQPN--NVGMI-QLSGNKPIAAYDPE--GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-- 406 (515)
Q Consensus 334 wd~~~~~--~~~~~-~~~~~~~~~~~s~~--~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-- 406 (515)
||+++++ ....+ .+...+.+++|+|+ +.+|++|+.|++|++||++.... .........|...+.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ--WEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC--EEECCBTTSSSSCBCCCEECCCCC
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC--cceeeeeccccCCcceEEEccccC
Confidence 9999874 44444 35567999999998 78999999999999999986421 1122334567788999999997
Q ss_pred ---------------CCEEEEEECCCcEEEEECCCC---ceeEEeeccccCCCCCEEEEEecCC----CEEEEEeCCCcE
Q psy6127 407 ---------------GKLILVSTNGSIIRLFDAFNG---NCVQSLSGVLNNNASPLEATFTPDS----QFVASGSTDGQV 464 (515)
Q Consensus 407 ---------------~~~l~~~s~dg~i~iwd~~~~---~~~~~~~~~~~~~~~i~~~~~sp~g----~~l~sgs~dg~I 464 (515)
+++|++|+.|+.|++||++.+ ++...+.+ |...|.+++|+|++ ++|++++.||+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~---h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA---HSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC---CSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc---CCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 478999999999999999765 34445554 44569999999987 899999999999
Q ss_pred EEEECCCC---e-EEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 465 HIWNAERG---Y-KVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 465 ~iwd~~~~---~-~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
++|++.+. + ....+.. |.+.|++++|+|++.+||+++.| +++|+....
T Consensus 241 ~iw~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLLHK-FNDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEEECSSTTCCCCBCCEEEE-CSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred EEEEccCccccchhhhhhhc-CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 99998762 1 1223344 88999999999999999998865 999997643
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=286.03 Aligned_cols=284 Identities=12% Similarity=0.023 Sum_probs=232.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---eeeEecC------------------------------------
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT---SKNTINS------------------------------------ 261 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~---~~~~~~~------------------------------------ 261 (515)
..++.+++|+|||++|+++ .++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999977666 47899999999988 5555442
Q ss_pred ------------------CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC--CCeeeEEec--CCCCCeEEEEEcCCC
Q psy6127 262 ------------------KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH--DNKYVRYFP--GHVRKVSSLNLSPVD 319 (515)
Q Consensus 262 ------------------~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~ 319 (515)
|...|.+++|+|+++.+++++ +.|+.|++||+. +++.+..+. .|...|.+++|+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACA-DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEE-GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEE-CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 233699999999999865444 579999999999 888888776 567899999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCCeEE----EE-ecCCCeeEEEECCC---CCEEEEEECCCcEEEEEeecCCCCCceeeecC
Q psy6127 320 DSFISGSYDKTVRVWDLRQPNNVG----MI-QLSGNKPIAAYDPE---GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391 (515)
Q Consensus 320 ~~l~s~s~dg~i~iwd~~~~~~~~----~~-~~~~~~~~~~~s~~---~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~ 391 (515)
++|++|+.||.|++|++.+++... .+ .+...+.+++|+|+ +++|++++.|+.|++||++++.. .....
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~~~ 237 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDKWL 237 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEEEC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eeeee
Confidence 999999999999999998876543 33 45667999999999 99999999999999999987541 22224
Q ss_pred CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc----------------------cCCCCCEEEEEe
Q psy6127 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL----------------------NNNASPLEATFT 449 (515)
Q Consensus 392 ~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~----------------------~~~~~i~~~~~s 449 (515)
..|...|.+++|+ ++++|++++.|+.|++||+.+++++..+..+. .....+..++|+
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 5788899999999 99999999999999999999999888876432 223458899999
Q ss_pred cCCCEEEEEe-CCCcEEEEEC--CCC---eEEEEEcCCCCCCeEEEEECCCCCEEEEeeC--------CEEEEcCCCC
Q psy6127 450 PDSQFVASGS-TDGQVHIWNA--ERG---YKVCVLDGDHPSAVQSLQFNPKYHMLASACS--------NMAFWIPTLS 513 (515)
Q Consensus 450 p~g~~l~sgs-~dg~I~iwd~--~~~---~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--------dv~iW~~~~~ 513 (515)
|+++++++++ .|+.|++|++ .++ +.+..+.. | +.|.+++|+|++.+++.++. .+++|.++..
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~-~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITF-P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC-S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCCCEEEEEECCCCeEEEEEeccCCCCceeeccEecc-C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 9999999998 8999999999 666 77777876 6 88999999996555544432 1799987543
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=278.65 Aligned_cols=290 Identities=11% Similarity=0.119 Sum_probs=216.3
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
....+++..+.+|.+.|++++|+|||++||+|+.|+ +++||..+++.......+ .+..+++.++++.+++++ +.|+
T Consensus 6 ~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~d~ 81 (355)
T 3vu4_A 6 MITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVT-GVKE 81 (355)
T ss_dssp -------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEEC-SSTT
T ss_pred ccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEE-CCcc
Confidence 344566667789999999999999999999998775 789999887766554433 588899999988876665 4689
Q ss_pred eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-CeEEEEecCCCeeEEEECCCCCEEEE-
Q psy6127 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP-NNVGMIQLSGNKPIAAYDPEGLAFAI- 365 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~- 365 (515)
+|++||..+++.+..+. |...|.+++|+++. ++.+ .|+.|++||+.++ +.+..+.. ....+++++ ..+++
T Consensus 82 ~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEE
T ss_pred EEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEe
Confidence 99999999999998887 67799999999754 4443 4789999999988 65555544 355667777 66666
Q ss_pred -EECCCcEEEEEeecCCCC----------Ccee-eecCCCCCcCeEEEEEcCCCCEEEEEECCCc-EEEEECCCCceeEE
Q psy6127 366 -GVNSDSIKLYDVRSYDKG----------PFAS-FKCPGERGCEWTGLKFSPDGKLILVSTNGSI-IRLFDAFNGNCVQS 432 (515)
Q Consensus 366 -g~~dg~i~i~d~~~~~~~----------~~~~-~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~-i~iwd~~~~~~~~~ 432 (515)
|+.+|.|++||+++.... .... ......|...|++++|+|+|++|++++.|++ |++||+++++++..
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 578999999999874310 0001 3334678899999999999999999999998 99999999999988
Q ss_pred ee-c-cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE----------------------EEEcCCCCCCeEE
Q psy6127 433 LS-G-VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV----------------------CVLDGDHPSAVQS 488 (515)
Q Consensus 433 ~~-~-~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~----------------------~~~~~~h~~~V~~ 488 (515)
+. + |. ..|.+++|+|+|++|++++.|++|++||+..+... ..+...+..+...
T Consensus 234 ~~~g~h~---~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (355)
T 3vu4_A 234 FRRGLDR---ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCK 310 (355)
T ss_dssp EECTTCC---SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCE
T ss_pred EEcCCCC---CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceE
Confidence 87 3 33 45999999999999999999999999999765311 1111112233467
Q ss_pred EEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 489 LQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 489 l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
++|+|++..+++++.+ +++|++..
T Consensus 311 ~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 311 IAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 9999999999999765 78887654
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=288.30 Aligned_cols=267 Identities=13% Similarity=0.123 Sum_probs=213.1
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
+.-...|.+++|+|||+++||++.|++|+ |.+.++ .+.+|...|.+++|+|+| .++.+.+|+.+
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg---------~~~~~~~~~~~-- 75 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE---------FENKLDFELAQ-- 75 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC---------CCCTTTTSCCC--
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC---------CcceEEEEeCC--
Confidence 45568999999999999999999999999 755554 457999999999999998 26666555543
Q ss_pred eeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC-----CeeEEEECCCCCEEEEEECCCc
Q psy6127 298 KYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG-----NKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 298 ~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
....+. .|...|.+++|+|+|+.|++++.||.|++||... .+..+.++. .+.+++|||+|++|++|+.||+
T Consensus 76 -~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 76 -QNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp -SSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSE
T ss_pred -CceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCE
Confidence 222333 5688999999999999999999999999999544 555555222 3899999999999999999999
Q ss_pred EEEEEeecCCCCC-----ceeeec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce---eEEeeccccCCCC
Q psy6127 372 IKLYDVRSYDKGP-----FASFKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC---VQSLSGVLNNNAS 442 (515)
Q Consensus 372 i~i~d~~~~~~~~-----~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~ 442 (515)
|++||+..+.... ...+.. ..+|...|.+++|+|+| +++++.|++|++||+..+.. ..++.. .+...
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~--~h~~~ 228 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN--ASRRK 228 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC--CCSSC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc--cccCc
Confidence 9999998753211 122211 24577899999999999 88899999999999988773 234532 23345
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEE--CCCCCEEEEeeCCE-EEEcCC
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQF--NPKYHMLASACSNM-AFWIPT 511 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~--sp~~~~las~~~dv-~iW~~~ 511 (515)
|.+++|+ |+.||+++ +++|++||+.+++......+ |.+.|++++| +|++..+++++.+. ++|..+
T Consensus 229 V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~g-h~~~V~~va~~~s~d~~~La~a~edG~klw~~d 296 (588)
T 2j04_A 229 ITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTG-SLENFHIIPLNHEKESTILLMSNKTSYKVLLED 296 (588)
T ss_dssp CCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECS-CCSCCCEEEETTCSSCEEEEECSSCEEEEEESS
T ss_pred EEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcC-CCceEEEEEeeeCCCCCEEEEEcCCCCEEEeec
Confidence 9999999 68999987 69999999998888554546 9999999999 99999999998665 599864
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=267.67 Aligned_cols=261 Identities=17% Similarity=0.237 Sum_probs=217.4
Q ss_pred CcEEEEccceeeeeEeeeec--cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCC
Q psy6127 198 RTITKCSENLVRSYRVAKVF--RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~--~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 275 (515)
|+.|++|| ..++++++++ .+|...|++++|+|++++||+|+.||+|++||+++++.+..+.+|...+.++.+. +
T Consensus 44 D~tV~iWd--~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~ 119 (318)
T 4ggc_A 44 DNSVYLWS--ASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--S 119 (318)
T ss_dssp TTEEEEEE--TTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--T
T ss_pred CCEEEEEE--CCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--C
Confidence 67899999 7778877765 4788899999999999999999999999999999999999999999888776655 4
Q ss_pred CeEEEEEeeCCCeEEEEECCCC-eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-----EEEecCC
Q psy6127 276 TTAIHASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-----GMIQLSG 349 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-----~~~~~~~ 349 (515)
..++ +++.++.+++|+.... ..+..+.+|...+..+.+.++++++++++.|++|++||+++++.. ....+..
T Consensus 120 ~~l~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 197 (318)
T 4ggc_A 120 YILS--SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG 197 (318)
T ss_dssp TEEE--EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS
T ss_pred CEEE--EEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC
Confidence 4444 4458999999998775 456778899999999999999999999999999999999887532 2224455
Q ss_pred CeeEEEECCCCCEE---EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE--CCCcEEEEEC
Q psy6127 350 NKPIAAYDPEGLAF---AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST--NGSIIRLFDA 424 (515)
Q Consensus 350 ~~~~~~~s~~~~~l---~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s--~dg~i~iwd~ 424 (515)
.+..+.++|++..+ ++++.+++|++||.+... ... ...+...+..+.|+|+++.+++++ .|+.|++||+
T Consensus 198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-----~~~-~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~ 271 (318)
T 4ggc_A 198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-----CLS-AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY 271 (318)
T ss_dssp CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-----EEE-EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred ceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-----ccc-cccceeeeeeeeecccccceEEEEEcCCCEEEEEEC
Confidence 68889999976543 355678999999987754 211 123456788999999999888765 7899999999
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
++++++..+.+|.. .|++++|+|+|++|++|+.||+|+|||+.+..
T Consensus 272 ~~~~~~~~l~gH~~---~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 272 PTMAKVAELKGHTS---RVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred CCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999999987654 49999999999999999999999999997653
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=277.29 Aligned_cols=262 Identities=14% Similarity=0.150 Sum_probs=217.9
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceee--eeEeeeeccccCCcEEEEEEcCC--CCEEE
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVR--SYRVAKVFRENTDKINSLDYSSD--GSLLI 237 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~--~~~~~~~~~~h~~~I~~l~~spd--~~~la 237 (515)
|+.+.++.+|...|.++.+.+... +.++++.++.+++|+ +. ..++...+.+|.+.|++++|+|+ +++|+
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~iw~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 73 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFE--VEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILA 73 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSS-----EEEEEETTSCEEEEE--EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred CCccEEecCCcccEEEEEEcCCCC-----EEEEEECCCcEEEEe--cCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEE
Confidence 345667888988888888876543 233677788999999 66 88889999999999999999987 99999
Q ss_pred EEeCCCeEEEEECCCCe--eeeEecCCCCceeEEEEecC--CCeEEEEEeeCCCeEEEEECCCCe--eeEEecCCCCCeE
Q psy6127 238 SCSDDDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHS--KTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVS 311 (515)
Q Consensus 238 sgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~~~d~~v~vwd~~~~~--~~~~~~~h~~~v~ 311 (515)
+|+.||.|++||+.+++ ....+..|...|.+++|+|+ +..+++++ .|+.|++||+.++. ....+.+|...|.
T Consensus 74 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 74 SCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred EeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec--CCCcEEEEecCCCCceeeEEecCCCCceE
Confidence 99999999999999987 77888899999999999999 77776664 79999999998873 4456678999999
Q ss_pred EEEEcC-------------CCCEEEEEeCCCcEEEEEcCCCCeE----EEE-ecCCCeeEEEECCC---CCEEEEEECCC
Q psy6127 312 SLNLSP-------------VDDSFISGSYDKTVRVWDLRQPNNV----GMI-QLSGNKPIAAYDPE---GLAFAIGVNSD 370 (515)
Q Consensus 312 ~l~~~~-------------~~~~l~s~s~dg~i~iwd~~~~~~~----~~~-~~~~~~~~~~~s~~---~~~l~~g~~dg 370 (515)
+++|+| +++.+++++.|+.|++||++++... ..+ .+...+.+++|+|+ ++++++++.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 999999 6899999999999999999877543 233 34567999999999 89999999999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
.|++||++...............+...+.+++|+|++++|++++.||.|++|++..+.....
T Consensus 232 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~ 293 (379)
T 3jrp_A 232 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 293 (379)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence 99999999865443344444556788999999999999999999999999999986544433
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=296.54 Aligned_cols=299 Identities=8% Similarity=0.081 Sum_probs=236.4
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
+++|+++.+++| + | ++...++++|...+..++|.|.. ..+.|+ +..++
T Consensus 28 ~~iASas~D~TV----------~--d---~~~~~~l~gh~~~v~~V~FsPdg---------------~~~~~~--~~~~~ 75 (588)
T 2j04_A 28 TLYLTTFPDISI----------G--Q---PKYAKDINCNSKNLFHVKEFPLE---------------FENKLD--FELAQ 75 (588)
T ss_dssp CEEEECSSSEEE----------E--E---ECCCSCCSSBGGGTEEEEEECCC---------------CCCTTT--TSCCC
T ss_pred CEEEEEcCCcee----------e--c---ccccceecCCCccEEEEEECCCC---------------CcceEE--EEeCC
Confidence 788999999988 6 4 55555667887767777775542 233344 33334
Q ss_pred eeeecc-ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCC-----ceeEEEEecCCCeEEEEEeeCC
Q psy6127 213 VAKVFR-ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY-----GVDLIKFTHSKTTAIHASTKVD 286 (515)
Q Consensus 213 ~~~~~~-~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~s~~~d 286 (515)
....+. +|...|.+++|||||++||+++.||+|++||.+. .+..+. |.. .+.+++|+|+|+.+++++ .|
T Consensus 76 ~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs--~D 150 (588)
T 2j04_A 76 QNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN--ED 150 (588)
T ss_dssp SSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE--TT
T ss_pred CceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc--CC
Confidence 334444 6689999999999999999999999999999654 666666 655 599999999999988776 79
Q ss_pred CeEEEEECCCCee-------eEEe----cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe---EEEE--ecCCC
Q psy6127 287 ATLRYLSLHDNKY-------VRYF----PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN---VGMI--QLSGN 350 (515)
Q Consensus 287 ~~v~vwd~~~~~~-------~~~~----~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~--~~~~~ 350 (515)
|+|++||+.++.. +.++ .+|.+.|.+++|+|+| +++++.|++|++||+.+++. ...+ .+...
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~ 228 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRK 228 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSC
T ss_pred CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCc
Confidence 9999999998752 5665 6788999999999999 88999999999999988874 3445 24456
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEE--cCCCCEEEEEECCCcEEEEECCCCc
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF--SPDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~--sp~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
+..++|+ |+.+++++ +++|++||+.... ......+|...+..++| +|++..++++++||+ ++|...
T Consensus 229 V~svaFs--g~~LASa~-~~tIkLWd~~~~~-----~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--- 296 (588)
T 2j04_A 229 ITDLKIV--DYKVVLTC-PGYVHKIDLKNYS-----ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--- 296 (588)
T ss_dssp CCCEEEE--TTEEEEEC-SSEEEEEETTTTE-----EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---
T ss_pred EEEEEEE--CCEEEEEe-CCeEEEEECCCCe-----EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---
Confidence 9999999 68898886 6999999998754 21223368889999999 999999999999999 999976
Q ss_pred eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
.++++||+..+++. |+++++|+...+. +..+. +...|++++|+|||+.+|+++.
T Consensus 297 ----------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~--~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 ----------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYE--TTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp ----------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSC--CEEEEEEEEECTTSSEEEEEEE
T ss_pred ----------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeec--cceEEEEEEECCCCCEEEEEEe
Confidence 15599999888775 9999999986554 33333 4567999999999999999873
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=282.40 Aligned_cols=281 Identities=14% Similarity=0.239 Sum_probs=220.6
Q ss_pred eeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE-----------eeeeccccC------------CcEEEEEE
Q psy6127 173 FVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR-----------VAKVFRENT------------DKINSLDY 229 (515)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~-----------~~~~~~~h~------------~~I~~l~~ 229 (515)
..|.++.|.+... +.++++.|+.+++|+ +...+ +...+.+|. +.|++++|
T Consensus 29 ~~V~~v~~s~~g~-----~la~g~~dg~v~iw~--~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 29 DIISTVEFNHSGE-----LLATGDKGGRVVIFQ--QEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp GSEEEEEECSSSS-----EEEEEETTSEEEEEE--ECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred CcEEEEEECCCCC-----EEEEEcCCCeEEEEE--ecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 3577777776432 334778889999998 55444 688899998 88999999
Q ss_pred cCCC--CEEEEEeCCCeEEEEECCCCeee---------------------------------------eE-ecCCCCcee
Q psy6127 230 SSDG--SLLISCSDDDQIIIYDCEQGTSK---------------------------------------NT-INSKKYGVD 267 (515)
Q Consensus 230 spd~--~~lasgs~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~ 267 (515)
+|++ .+|++++.|++|++||+.+++.. .. ..+|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 9998 79999999999999998764432 12 367999999
Q ss_pred EEEEecCCCeEEEEEeeCCCeEEEEECCC-CeeeE-------EecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCC
Q psy6127 268 LIKFTHSKTTAIHASTKVDATLRYLSLHD-NKYVR-------YFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 268 ~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-~~~~~-------~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~ 338 (515)
+++|+|+++.++++ .|+.|++||+++ ++... .+.+|...|.+++|+|++ ++|++|+.||.|++||+++
T Consensus 182 ~~~~~~~~~~l~s~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 182 SISINSDYETYLSA---DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA 258 (447)
T ss_dssp EEEECTTSSEEEEE---CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred EEEEcCCCCEEEEe---CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC
Confidence 99999999877653 499999999984 44444 356899999999999998 8999999999999999999
Q ss_pred CCe----EEEEecCC-------------CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc-----
Q psy6127 339 PNN----VGMIQLSG-------------NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC----- 396 (515)
Q Consensus 339 ~~~----~~~~~~~~-------------~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~----- 396 (515)
++. ...+..+. .+.+++|+|++++|++++. +.|++||++.... ....+. .|..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~-~~~~~~---~~~~~~~~l 333 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR-PVETYQ---VHEYLRSKL 333 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS-CSCCEE---SCGGGTTTH
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc-ccceee---ccccccccc
Confidence 886 56665443 6999999999999999999 9999999986221 111222 2221
Q ss_pred ----------CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc-----------------------------
Q psy6127 397 ----------EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL----------------------------- 437 (515)
Q Consensus 397 ----------~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~----------------------------- 437 (515)
.+..++|+|++++|++++.||.|++||+.+++.+. +..+.
T Consensus 334 ~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (447)
T 3dw8_B 334 CSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDS 412 (447)
T ss_dssp HHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGG
T ss_pred cccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccc
Confidence 12349999999999999999999999999987753 22221
Q ss_pred -cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 438 -NNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 438 -~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
.....+..++|+|++++||+++.++ +++|.-+
T Consensus 413 ~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 413 LDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 2234588999999999999998776 8888643
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-32 Score=268.78 Aligned_cols=277 Identities=15% Similarity=0.164 Sum_probs=234.2
Q ss_pred eeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeeeeEecCCCCceeEE
Q psy6127 191 LAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLI 269 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~l-asgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 269 (515)
+.++++.++.+++|| ...+++...+.+|.. +.+++|+|+++++ ++++.|++|++||..+++....+..+. .+.++
T Consensus 4 l~vs~~~d~~v~v~d--~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 4 AYIANSESDNISVID--VTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEETTTTEEEEEE--TTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred EEEEcCCCCEEEEEE--CCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 344778889999999 777888888888765 8999999999977 677789999999999999998888765 89999
Q ss_pred EEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCCeEEEEecC
Q psy6127 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF-ISGSYDKTVRVWDLRQPNNVGMIQLS 348 (515)
Q Consensus 270 ~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~ 348 (515)
+|+|+++.++++. +.++.|++||+.+++.+..+..| ..+.+++|+|+++.+ ++++.|+.|++||+++++....+..+
T Consensus 80 ~~spdg~~l~~~~-~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 80 AVSPDGKQVYVTN-MASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp EECTTSSEEEEEE-TTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred EECCCCCEEEEEE-CCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 9999999887665 46899999999999998888754 568999999999977 68888999999999999999888877
Q ss_pred CCeeEEEECCCCCEE-EEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE---CCCcEEEEEC
Q psy6127 349 GNKPIAAYDPEGLAF-AIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST---NGSIIRLFDA 424 (515)
Q Consensus 349 ~~~~~~~~s~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s---~dg~i~iwd~ 424 (515)
..+..++|+|+++.+ ++++.++.|++||+++.+ ..... .+...+.+++|+|+++++++++ .++.|++||+
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-----~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-----VIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----EEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe-----EEEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 778999999999987 566788999999998753 22221 2345678999999999999888 6899999999
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEE-EEEeCCCcEEEEECCCCeEEEEEcCCCCC
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFV-ASGSTDGQVHIWNAERGYKVCVLDGDHPS 484 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l-~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 484 (515)
.+++.+..+..+. .+.+++|+|+|+++ ++++.|+.|++||+.+++.+..+.. |..
T Consensus 232 ~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~-~~~ 287 (391)
T 1l0q_A 232 GTNKITARIPVGP----DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV-GKN 287 (391)
T ss_dssp TTTEEEEEEECCS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSS
T ss_pred CCCeEEEEEecCC----CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC-CcC
Confidence 9999888877643 27899999999977 5668899999999999999988875 443
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=268.55 Aligned_cols=283 Identities=12% Similarity=0.088 Sum_probs=229.2
Q ss_pred ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE---eeeeccccCCcEEEEEEcCCCC-EEEEEeCCC
Q psy6127 168 LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR---VAKVFRENTDKINSLDYSSDGS-LLISCSDDD 243 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~---~~~~~~~h~~~I~~l~~spd~~-~lasgs~dg 243 (515)
..+|...+.++.+.+... +.++++.++.+++|+ +...+ ....+.+|...|++++|+|+++ +|++|+.||
T Consensus 7 ~~~h~~~v~~~~~s~~~~-----~l~~~~~d~~v~iw~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 79 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKS-----LLLITSWDGSLTVYK--FDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp SSCCSSCEEEEEEEGGGT-----EEEEEETTSEEEEEE--EETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred ccCCCCcEEEEEEcCCCC-----EEEEEcCCCeEEEEE--eCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC
Confidence 456766788888877543 234667889999998 55544 3455669999999999999999 999999999
Q ss_pred eEEEEEC-CCCeeeeEecC--CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC---------CeeeEEecCCCCCeE
Q psy6127 244 QIIIYDC-EQGTSKNTINS--KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD---------NKYVRYFPGHVRKVS 311 (515)
Q Consensus 244 ~i~iwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~---------~~~~~~~~~h~~~v~ 311 (515)
.|++||+ .+++. ..+.. |...|.+++|+| +..+++++ .|+.|++||+++ ++++..+. |...|.
T Consensus 80 ~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~ 154 (342)
T 1yfq_A 80 EILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAAS--WDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIF 154 (342)
T ss_dssp CEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEE--TTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEE
T ss_pred eEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEc--CCCeEEEEcccccccccccccCCeeeEEe-eCCceE
Confidence 9999999 76654 77788 999999999999 77776554 799999999988 77777776 899999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCC-CCeE---EEEecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecC--C--C
Q psy6127 312 SLNLSPVDDSFISGSYDKTVRVWDLRQ-PNNV---GMIQLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSY--D--K 382 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~---~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~--~--~ 382 (515)
+++|+|++ +++++.|+.|++||+++ +... ....+...+.+++|+| +++++++++.||.+++|+++.. . .
T Consensus 155 ~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 155 TMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp EEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC
T ss_pred EEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccc
Confidence 99999877 99999999999999998 5432 2234556799999999 9999999999999999999875 1 1
Q ss_pred CCceeeecCC------CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 383 GPFASFKCPG------ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 383 ~~~~~~~~~~------~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
.....+.... .+...|.+++|+|++++|++++.||.|++||+.+++.+..+..+. ...|.+++ |++++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h--~~~v~~~~--~~~~~l~ 308 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN--EDSVVKIA--CSDNILC 308 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS--SSEEEEEE--ECSSEEE
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhccc--CCCceEec--CCCCeEE
Confidence 2222332211 234589999999999999999999999999999999988887651 33488888 9999999
Q ss_pred EEeCCCc-EEEEE
Q psy6127 457 SGSTDGQ-VHIWN 468 (515)
Q Consensus 457 sgs~dg~-I~iwd 468 (515)
+++.||. .+.|.
T Consensus 309 s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 309 LATSDDTFKTNAA 321 (342)
T ss_dssp EEEECTHHHHCSS
T ss_pred EEecCCccccccc
Confidence 9999998 55554
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=272.47 Aligned_cols=261 Identities=11% Similarity=0.106 Sum_probs=201.3
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC---------CCe
Q psy6127 228 DYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH---------DNK 298 (515)
Q Consensus 228 ~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~---------~~~ 298 (515)
.+.++++++++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-----~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-----IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-----EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-----eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 455688899999999999999999998888776 466788888887 3445689999999665 455
Q ss_pred eeEEe-cCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCCEEEEEECCCcEE
Q psy6127 299 YVRYF-PGHVRKVSSLNLSP--VDDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFAIGVNSDSIK 373 (515)
Q Consensus 299 ~~~~~-~~h~~~v~~l~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 373 (515)
.+..+ .+|.+.|.+++|+| +++++++++.||+|++||+++++..... .+...+.+++|+|++.++++|+.||.|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 44444 36778999999999 9999999999999999999999987666 3334689999999999999999999999
Q ss_pred EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCC--EEEEEecC
Q psy6127 374 LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP--LEATFTPD 451 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i--~~~~~sp~ 451 (515)
+||+++++... ......|..+|++++|+|++.+|++++. +.|++||+++++....+..+..+...+ .+++|+|+
T Consensus 196 iwd~~~~~~~~---~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 196 VYNLSSPDQAS---SRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp EEESSCTTSCC---EECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred EEECCCCCCCc---cEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 99999865210 1222347889999999999999999994 599999999988776665433332223 36999999
Q ss_pred CCEEEEEeC-CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECC---CCCEEEEeeCC
Q psy6127 452 SQFVASGST-DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP---KYHMLASACSN 504 (515)
Q Consensus 452 g~~l~sgs~-dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp---~~~~las~~~d 504 (515)
|++|++++. |+.|++|++.++...... .++..++|.| +...+++++.+
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d 323 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTKNWTK-----DEESALCLQSDTADFTDMDVVCGD 323 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCSEEE-----EEEEECCC----CCCCEEEEEEET
T ss_pred CCEEEEecCCCCcEEEEEEcccccceEe-----cCceeEecCccccccceeEEEecC
Confidence 999999998 999999999665432222 3456666666 66666665533
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-32 Score=273.02 Aligned_cols=297 Identities=12% Similarity=0.107 Sum_probs=242.0
Q ss_pred EEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeee-----EecCCCCceeEEEEecC
Q psy6127 200 ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN-----TINSKKYGVDLIKFTHS 274 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~~ 274 (515)
.+..++..-...+....+..+. .+.+++|+|++.++++++.|+.|++||+.+++... .+.+|...+.+++|+++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH 180 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG
T ss_pred EEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC
Confidence 5666652213346666666654 45699999988888888889999999999998877 34578889999999988
Q ss_pred CCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEE-EeCCCcEEEEEcCCCCeEEEEecCCCeeE
Q psy6127 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFIS-GSYDKTVRVWDLRQPNNVGMIQLSGNKPI 353 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 353 (515)
+..++++ +.|+.|++||+++++.+..+..|...+.+++|+|+++.+++ ++.|+.|++||+++++.+..+.....+..
T Consensus 181 ~~~~~s~--~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 258 (433)
T 3bws_A 181 NELWVSQ--MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRG 258 (433)
T ss_dssp TEEEEEE--GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEE
T ss_pred CEEEEEE--CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceE
Confidence 8655443 57999999999999999999899999999999999998754 45799999999999998888877777899
Q ss_pred EEECCCCCEEEEEE--------CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEE-EEEECCCcEEEEEC
Q psy6127 354 AAYDPEGLAFAIGV--------NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI-LVSTNGSIIRLFDA 424 (515)
Q Consensus 354 ~~~s~~~~~l~~g~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l-~~~s~dg~i~iwd~ 424 (515)
++|+|+++.+++++ .|+.|++||+++++ .... ..+...+.+++|+|+++++ ++++.++.|++||+
T Consensus 259 ~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-----~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 259 LLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-----LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp EEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-----EEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred EEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-----EEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 99999999999988 48899999998753 1111 1233467899999999865 55578999999999
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC---------------CCcEEEEECCCCeEEEEEcCCCCCCeEEE
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST---------------DGQVHIWNAERGYKVCVLDGDHPSAVQSL 489 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~---------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 489 (515)
.+++....+.. ...+.+++|+|+|+++++++. ||.|++||+.+++.+..+.. ...+.++
T Consensus 333 ~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~ 406 (433)
T 3bws_A 333 KEKKVQKSIPV----FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGL 406 (433)
T ss_dssp TTTEEEEEEEC----SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEE
T ss_pred CCCcEEEEecC----CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC--CCCCceE
Confidence 99988877752 233889999999999988876 57999999999999998875 4679999
Q ss_pred EECCCCCEEEEeeC---CEEEEcCC
Q psy6127 490 QFNPKYHMLASACS---NMAFWIPT 511 (515)
Q Consensus 490 ~~sp~~~~las~~~---dv~iW~~~ 511 (515)
+|+|+++++++++. .+++|+++
T Consensus 407 ~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 407 DVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEcCCCCEEEEEECCCCeEEEEEec
Confidence 99999999887753 39999976
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=268.93 Aligned_cols=305 Identities=13% Similarity=0.131 Sum_probs=237.6
Q ss_pred CCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeee-e-EeeeeccccCCcEEEEEEcCC
Q psy6127 155 GSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRS-Y-RVAKVFRENTDKINSLDYSSD 232 (515)
Q Consensus 155 ~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~-~-~~~~~~~~h~~~I~~l~~spd 232 (515)
..|+....+.+..+.+|...|.++.|.+..... .+.++++.++.+++|+ +.. . .....+.+|.+.|++++|+|+
T Consensus 22 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g--~~l~~~~~dg~i~iw~--~~~~~~~~~~~~~~h~~~v~~~~~~~~ 97 (368)
T 3mmy_A 22 TTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPG--NFLIAGSWANDVRCWE--VQDSGQTIPKAQQMHTGPVLDVCWSDD 97 (368)
T ss_dssp -CCSSCTTCCEECSSCCSSCEEEEEECCTTSSS--EEEEEEETTSEEEEEE--ECTTSCEEEEEEEECSSCEEEEEECTT
T ss_pred ccCCCCCcceeEeccCCCCceEEEEEcCCCCCc--eEEEEECCCCcEEEEE--cCCCCceeEEEeccccCCEEEEEECcC
Confidence 456666777788889998888888888763000 0334778889999999 654 3 344788999999999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEE--ecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKF--THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV 310 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v 310 (515)
+++|++|+.||.|++||+.+++... +..|...|.+++| +|++..++++ +.|+.|++||+++++.+..+..|. .+
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~-~~ 173 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTG--SWDKTLKFWDTRSSNPMMVLQLPE-RC 173 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEE--ETTSEEEEECSSCSSCSEEEECSS-CE
T ss_pred CCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEc--cCCCcEEEEECCCCcEEEEEecCC-Cc
Confidence 9999999999999999999888766 5668999999999 6777656554 479999999999999998888664 57
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE---ecCCCeeEEEECCCCCE----EEEEECCCcEEEEEeecCCC-
Q psy6127 311 SSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI---QLSGNKPIAAYDPEGLA----FAIGVNSDSIKLYDVRSYDK- 382 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~s~~~~~----l~~g~~dg~i~i~d~~~~~~- 382 (515)
.++.+. +..+++++.|+.+++||++........ .......++++.++... +++++.||.|++||++....
T Consensus 174 ~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 174 YCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA 251 (368)
T ss_dssp EEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH
T ss_pred eEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc
Confidence 777776 458899999999999999887655443 22344566666655544 99999999999999987532
Q ss_pred CCceeeecCCCCCc------------CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 383 GPFASFKCPGERGC------------EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 383 ~~~~~~~~~~~~~~------------~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
.....+ ..|.. .|++++|+|++++|++++.||.|++||+.+++++..+..|. ..|.+++|+|
T Consensus 252 ~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~ 325 (368)
T 3mmy_A 252 KDNFTF---KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD---QPISACCFNH 325 (368)
T ss_dssp HHSEEE---ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS---SCEEEEEECT
T ss_pred ccceee---eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC---CCceEEEECC
Confidence 111111 22222 69999999999999999999999999999999988887654 4599999999
Q ss_pred CCCEEEEEeCCCcEEEE---ECCCCeEE
Q psy6127 451 DSQFVASGSTDGQVHIW---NAERGYKV 475 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iw---d~~~~~~~ 475 (515)
+|++|++++.|+..+.| +.+....+
T Consensus 326 ~g~~l~~~s~d~~~~~~~~~~~~~~~~i 353 (368)
T 3mmy_A 326 NGNIFAYASSYDWSKGHEFYNPQKKNYI 353 (368)
T ss_dssp TSSCEEEEECCCSTTCGGGCCTTSCCEE
T ss_pred CCCeEEEEecccccccccccCCCcccee
Confidence 99999999988755444 44444433
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=297.49 Aligned_cols=255 Identities=15% Similarity=0.198 Sum_probs=212.6
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeeeeEecCCCCceeEEEEecC--CCeEEEEEeeCCCeE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE--QGTSKNTINSKKYGVDLIKFTHS--KTTAIHASTKVDATL 289 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~~~d~~v 289 (515)
..++.+|.+.|++++|+|++++|++|+.||+|++||+. +++....+.+|..+|.+++|+|+ ++.+++++ .||.|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s--~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE--TTSCE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe--CCCeE
Confidence 35688999999999999999999999999999999998 55778889999999999999988 77666554 79999
Q ss_pred EEEECCCCe--eeEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCCe---EEEEecCCCeeEEEECC----
Q psy6127 290 RYLSLHDNK--YVRYFPGHVRKVSSLNLSPV--DDSFISGSYDKTVRVWDLRQPNN---VGMIQLSGNKPIAAYDP---- 358 (515)
Q Consensus 290 ~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~s~---- 358 (515)
++||+.+++ .+..+.+|...|.+++|+|+ ++.+++|+.||.|++||++++.. .....+...+.+++|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999999987 77888899999999999999 99999999999999999988733 23335566799999999
Q ss_pred ---------CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC---CCEEEEEECCCcEEEEECCC
Q psy6127 359 ---------EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD---GKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 359 ---------~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~---~~~l~~~s~dg~i~iwd~~~ 426 (515)
++..+++|+.||.|++||++..... .........|...|++++|+|+ ++++++++.||.|++||+.+
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCccc-ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 5899999999999999999975421 1233344578889999999999 89999999999999999988
Q ss_pred Ccee--EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 427 GNCV--QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 427 ~~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
++.. ........+...+.+++|+|+|+++++|+.||.|++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 6421 22222333556699999999999999999999999999874
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-32 Score=262.48 Aligned_cols=294 Identities=13% Similarity=0.146 Sum_probs=214.5
Q ss_pred cccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee----EeeeeccccCCcEEEEEEcC--CCCEEEEEe
Q psy6127 167 SLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY----RVAKVFRENTDKINSLDYSS--DGSLLISCS 240 (515)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~----~~~~~~~~h~~~I~~l~~sp--d~~~lasgs 240 (515)
.+.+|...|.++.|.+... +.++++.|+.+++|+ +... ++...+.+|...|++++|+| |+++|++|+
T Consensus 6 ~~~gH~~~v~~~~~~~~~~-----~l~~~~~dg~i~iw~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGR-----HVATCSSDQHIKVFK--LDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp EECCCSSCEEEEEECSSSS-----EEEEEETTSEEEEEE--ECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred cCcccccceeEEEEcCCCC-----EEEEeeCCCeEEEEE--CCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 3467877788888877543 334677889999998 4433 67788899999999999999 699999999
Q ss_pred CCCeEEEEECCCC---------eeeeEecCCCCceeEEEEecC--CCeEEEEEeeCCCeEEEEECCCCeeeEEec-----
Q psy6127 241 DDDQIIIYDCEQG---------TSKNTINSKKYGVDLIKFTHS--KTTAIHASTKVDATLRYLSLHDNKYVRYFP----- 304 (515)
Q Consensus 241 ~dg~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~----- 304 (515)
.||.|++||+.++ +....+..|...|.+++|+|+ +..+++++ .|+.|++||+++++.+..+.
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~ 156 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG--NDGILRLYDALEPSDLRSWTLTSEM 156 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTCEEEEEECSSTTCTTCCEEEEEE
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec--CCCcEEEecCCChHHhccccccccc
Confidence 9999999999887 567888999999999999999 87777654 79999999998876544332
Q ss_pred --------CCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEcCCCCe--EEEE-ecCCCeeEEEECCCC----CEEEEE
Q psy6127 305 --------GHVRKVSSLNLSPV---DDSFISGSYDKTVRVWDLRQPNN--VGMI-QLSGNKPIAAYDPEG----LAFAIG 366 (515)
Q Consensus 305 --------~h~~~v~~l~~~~~---~~~l~s~s~dg~i~iwd~~~~~~--~~~~-~~~~~~~~~~~s~~~----~~l~~g 366 (515)
+|...+.+++|+|+ +..+++++.|+.+.+|+...++. ...+ .+...+.+++|+|++ ++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 157 KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred cccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 68889999999997 88999999999998888887775 3333 345679999999998 899999
Q ss_pred ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE----CCCcEEEEECCCCceeEEeeccccCCCC
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST----NGSIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s----~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
+.||.|++||++...... ..............++....+..+. ....+.+|+....+.+..+.+| ...
T Consensus 237 ~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~ 308 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPL-----ASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH---NGE 308 (351)
T ss_dssp ETTSCEEEEEEEECC--------------------------------------------CCSEEEEEEEEECTT---SSC
T ss_pred cCCCeEEEEeCCCCcCcc-----ccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc---ccc
Confidence 999999999999754211 1111222222333444443433332 3345566666566666666654 445
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV 477 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~ 477 (515)
|++++|+|++++|++|+.||.|++||+.+++....
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhh
Confidence 99999999999999999999999999998754443
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-30 Score=260.20 Aligned_cols=335 Identities=10% Similarity=0.096 Sum_probs=257.6
Q ss_pred heeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEe
Q psy6127 134 IVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRV 213 (515)
Q Consensus 134 ~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~ 213 (515)
+++++..++.| ++||..+++.+..+.+|.. +.++.+.+.... +.++++.++.+++|| ...+++
T Consensus 4 l~vs~~~d~~v----------~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~----l~~~~~~d~~i~v~d--~~~~~~ 66 (391)
T 1l0q_A 4 AYIANSESDNI----------SVIDVTSNKVTATIPVGSN-PMGAVISPDGTK----VYVANAHSNDVSIID--TATNNV 66 (391)
T ss_dssp EEEEETTTTEE----------EEEETTTTEEEEEEECSSS-EEEEEECTTSSE----EEEEEGGGTEEEEEE--TTTTEE
T ss_pred EEEEcCCCCEE----------EEEECCCCeEEEEeecCCC-cceEEECCCCCE----EEEECCCCCeEEEEE--CCCCeE
Confidence 46677888888 9999999999998888754 455555544321 334666778899999 677888
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCS-DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
...+..|. .+.+++|+|++++|+.++ .|+.|++||+.+++....+..+ ..+.+++|+|+++.++++. +.++.|++|
T Consensus 67 ~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~-~~~~~v~~~ 143 (391)
T 1l0q_A 67 IATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTN-NGDKTVSVI 143 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEE-TTTTEEEEE
T ss_pred EEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEe-CCCCEEEEE
Confidence 88887766 899999999999886554 6799999999999988888765 4689999999999876554 579999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE---C
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSF-ISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV---N 368 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---~ 368 (515)
|+.+++.+..+..| ..+.+++|+|+++.+ ++++.|+.|++||+++++....+.....+..++|+|+++++++++ .
T Consensus 144 d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 222 (391)
T 1l0q_A 144 NTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKY 222 (391)
T ss_dssp ETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSS
T ss_pred ECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcC
Confidence 99999998888765 457999999999977 677789999999999999888888777789999999999999888 6
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEE-EEEECCCcEEEEECCCCceeEEeeccccCCCCC----
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI-LVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASP---- 443 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l-~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i---- 443 (515)
++.|++||+++++ .......+ ..+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..+.......
T Consensus 223 ~~~v~~~d~~~~~-----~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 296 (391)
T 1l0q_A 223 FNTVSMIDTGTNK-----ITARIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIG 296 (391)
T ss_dssp CCEEEEEETTTTE-----EEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEE
T ss_pred CCcEEEEECCCCe-----EEEEEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeee
Confidence 8999999998753 22222222 346799999999988 566789999999999999888876543321101
Q ss_pred --------EEEEEecCC----------CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 444 --------LEATFTPDS----------QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 444 --------~~~~~sp~g----------~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
....|+.+. ..+...+.|...++|++.+|... . +..+ ...|+|+|.+.++..
T Consensus 297 ~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~-~~~~--~~~~~~~g~y~~~~~ 366 (391)
T 1l0q_A 297 SIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS----K-KQNP--THTYSETGIYTVRLT 366 (391)
T ss_dssp ECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE----C-SSSC--EECCSSCEEEEEEEE
T ss_pred cccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc----C-cCCC--eEEeCCCceEEEEEE
Confidence 112233221 23555567889999999888752 1 3333 367899998877643
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-31 Score=264.78 Aligned_cols=289 Identities=12% Similarity=0.162 Sum_probs=235.5
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeee-----eccccCCcEEEEEEcCCCCEEE
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAK-----VFRENTDKINSLDYSSDGSLLI 237 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~-----~~~~h~~~I~~l~~spd~~~la 237 (515)
+.+..+..+... .++.+.+.. .+.++++.++.+.+|| ...++... .+.+|.+.|.+++|+|++++++
T Consensus 114 ~~~~~~~~~~~~-~~~~~s~~~-----~~~~~~~~~~~i~~~d--~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 185 (433)
T 3bws_A 114 RFISRFKTGFQP-KSVRFIDNT-----RLAIPLLEDEGMDVLD--INSGQTVRLSPPEKYKKKLGFVETISIPEHNELWV 185 (433)
T ss_dssp EEEEEEECSSCB-CCCEESSSS-----EEEEEBTTSSSEEEEE--TTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEE
T ss_pred eEEEEEcCCCCc-eEEEEeCCC-----eEEEEeCCCCeEEEEE--CCCCeEeeecCcccccccCCceeEEEEcCCCEEEE
Confidence 555556555432 234444311 1445677778899998 66666665 5678999999999999999999
Q ss_pred EEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC
Q psy6127 238 SCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 238 sgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 317 (515)
+++.|+.|++||+.+++....+..|...+.+++|+|+++.+++++ +.++.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 186 s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~ 263 (433)
T 3bws_A 186 SQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSN-WISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK 263 (433)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEE-TTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT
T ss_pred EECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEe-cCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC
Confidence 999999999999999999999999999999999999999877665 47999999999999998888754 4599999999
Q ss_pred CCCEEEEEe--------CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEE-EEEECCCcEEEEEeecCCCCCceee
Q psy6127 318 VDDSFISGS--------YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAF-AIGVNSDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 318 ~~~~l~s~s--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~ 388 (515)
+++.+++++ .|+.|++||+++++....+.+...+..++|+|+++.+ ++++.++.+++||+++++ ..
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~-----~~ 338 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK-----VQ 338 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE-----EE
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc-----EE
Confidence 999999888 5889999999999888887666678899999999755 556889999999998643 22
Q ss_pred ecCCCCCcCeEEEEEcCCCCEEEEEEC---------------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 389 KCPGERGCEWTGLKFSPDGKLILVSTN---------------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 389 ~~~~~~~~~i~~l~~sp~~~~l~~~s~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
... .+...+.+++|+|+++++++++. ||.|++||..+++.+..+... ..+.+++|+|+|+
T Consensus 339 ~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~ 413 (433)
T 3bws_A 339 KSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG----NQPTGLDVSPDNR 413 (433)
T ss_dssp EEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS----SSEEEEEECTTSC
T ss_pred EEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC----CCCceEEEcCCCC
Confidence 111 24556889999999999998886 579999999999988887752 2389999999999
Q ss_pred EEEEEeC-CCcEEEEECCC
Q psy6127 454 FVASGST-DGQVHIWNAER 471 (515)
Q Consensus 454 ~l~sgs~-dg~I~iwd~~~ 471 (515)
+|++++. |+.|++|+++.
T Consensus 414 ~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 414 YLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEETTTTEEEEEEETT
T ss_pred EEEEEECCCCeEEEEEecC
Confidence 9988875 99999999863
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-31 Score=265.47 Aligned_cols=248 Identities=15% Similarity=0.298 Sum_probs=203.8
Q ss_pred eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC----------CeeeEEecCCCCCeEEEEEcCCCC-EEEEE
Q psy6127 257 NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD----------NKYVRYFPGHVRKVSSLNLSPVDD-SFISG 325 (515)
Q Consensus 257 ~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~ 325 (515)
.....|.+.|++++|+|++..+++ +++.+|.|++||+.+ .+....+.+|...|.+++|+|+++ +|++|
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~la-t~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIA-TKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEE-EECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEE-EECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 445678899999999998544433 335799999999986 577788899999999999999998 99999
Q ss_pred eCCCcEEEEEcCCCCe-------EEEE-ecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 326 SYDKTVRVWDLRQPNN-------VGMI-QLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 326 s~dg~i~iwd~~~~~~-------~~~~-~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
+.||.|++||+..+.. ...+ .+...+.+++|+| ++..+++++.||.|++||++...... .......|..
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~--~~~~~~~~~~ 278 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK--PSHTVDAHTA 278 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS--CSEEEECCSS
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc--ceeEeecCCC
Confidence 9999999999987432 2333 4556799999999 78899999999999999999753111 1122236778
Q ss_pred CeEEEEEcCCCC-EEEEEECCCcEEEEECCC-CceeEEeeccccCCCCCEEEEEecCCC-EEEEEeCCCcEEEEECCC--
Q psy6127 397 EWTGLKFSPDGK-LILVSTNGSIIRLFDAFN-GNCVQSLSGVLNNNASPLEATFTPDSQ-FVASGSTDGQVHIWNAER-- 471 (515)
Q Consensus 397 ~i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs~dg~I~iwd~~~-- 471 (515)
.|++++|+|++. ++++|+.||.|++||+++ +.++..+..|. ..|.+++|+|+++ ++++++.||.|++||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~---~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK---DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS---SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC---CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 899999999987 688999999999999998 55677777654 4499999999985 799999999999999977
Q ss_pred ------------CeEEEEEcCCCCCCeEEEEECCCCC-EEEEeeCC--EEEEcCC
Q psy6127 472 ------------GYKVCVLDGDHPSAVQSLQFNPKYH-MLASACSN--MAFWIPT 511 (515)
Q Consensus 472 ------------~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~~d--v~iW~~~ 511 (515)
.+++..+.+ |...|++++|+|++. ++++++.+ +++|+++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 367777777 999999999999999 88888755 9999975
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-31 Score=266.80 Aligned_cols=249 Identities=13% Similarity=0.254 Sum_probs=207.8
Q ss_pred eeccccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCC----------CeeeeEecCCCCceeEEEEecCCC-eEEEEE
Q psy6127 215 KVFRENTDKINSLDYSSD-GSLLISCSDDDQIIIYDCEQ----------GTSKNTINSKKYGVDLIKFTHSKT-TAIHAS 282 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd-~~~lasgs~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s 282 (515)
....+|.+.|++++|+|+ +.+||+++.||.|++||+.+ .+....+.+|...+.+++|+|++. .++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~- 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA- 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE-
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE-
Confidence 445689999999999997 78999999999999999986 677888999999999999999988 44433
Q ss_pred eeCCCeEEEEECCCCee-------eEEecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCC---CeEEEE-ecCCC
Q psy6127 283 TKVDATLRYLSLHDNKY-------VRYFPGHVRKVSSLNLSP-VDDSFISGSYDKTVRVWDLRQP---NNVGMI-QLSGN 350 (515)
Q Consensus 283 ~~~d~~v~vwd~~~~~~-------~~~~~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iwd~~~~---~~~~~~-~~~~~ 350 (515)
+.||.|++||+.++.. ...+.+|...|.+++|+| ++..|++++.||.|++||++++ +....+ .+...
T Consensus 201 -~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 201 -SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp -CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred -eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 5799999999987422 456778999999999999 6779999999999999999987 455555 55667
Q ss_pred eeEEEECCCCC-EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC-EEEEEECCCcEEEEECCCC-
Q psy6127 351 KPIAAYDPEGL-AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK-LILVSTNGSIIRLFDAFNG- 427 (515)
Q Consensus 351 ~~~~~~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~~- 427 (515)
+.+++|+|++. .+++|+.||.|++||++.... .......|...|.+++|+|+++ ++++++.|+.|++||+...
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~----~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKL----KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTS----CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC----CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 99999999987 688999999999999987432 2222345778999999999985 6899999999999999872
Q ss_pred -------------ceeEEeeccccCCCCCEEEEEecCCC-EEEEEeCCCcEEEEECCCC
Q psy6127 428 -------------NCVQSLSGVLNNNASPLEATFTPDSQ-FVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 428 -------------~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs~dg~I~iwd~~~~ 472 (515)
+.+..+. .+...|.+++|+|+++ ++++++.||.|++|++..+
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHG---GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECC---CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccCccccccCCcceEEEcC---CCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 3334443 3455599999999999 9999999999999998653
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.5e-31 Score=263.01 Aligned_cols=231 Identities=16% Similarity=0.159 Sum_probs=170.4
Q ss_pred EEEEeeCCCeEEEEECCCCeee-----EEecCCCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEEcCCCCeEE-E
Q psy6127 279 IHASTKVDATLRYLSLHDNKYV-----RYFPGHVRKVSSLNLSP--------VDDSFISGSYDKTVRVWDLRQPNNVG-M 344 (515)
Q Consensus 279 ~~~s~~~d~~v~vwd~~~~~~~-----~~~~~h~~~v~~l~~~~--------~~~~l~s~s~dg~i~iwd~~~~~~~~-~ 344 (515)
++++++.|++|++||.++++.. ..+.+|.+.|++++|+| |+++|++|+.|++|++||++++.... .
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 4455568999999999988653 34689999999999998 78899999999999999998876654 4
Q ss_pred EecCCCeeEEEECCCCC-EEEEEECCCcEEEEEeecCCCCCcee--------------------eecCCCCCcCeEEEEE
Q psy6127 345 IQLSGNKPIAAYDPEGL-AFAIGVNSDSIKLYDVRSYDKGPFAS--------------------FKCPGERGCEWTGLKF 403 (515)
Q Consensus 345 ~~~~~~~~~~~~s~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~~--------------------~~~~~~~~~~i~~l~~ 403 (515)
+.++..+.+++|+|++. +|++++.|++|++||+++++...... ......+...+.++.|
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~ 262 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRW 262 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEE
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeee
Confidence 57778899999999874 79999999999999998754211100 0112356667888988
Q ss_pred c-CCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC---------------CCCEEEEEec--CCCEEEEEeCCCcEE
Q psy6127 404 S-PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN---------------ASPLEATFTP--DSQFVASGSTDGQVH 465 (515)
Q Consensus 404 s-p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~---------------~~i~~~~~sp--~g~~l~sgs~dg~I~ 465 (515)
+ |+++.+++++.|+++++||+..++....+..+.... .......|+| ++.++++|+.||.|+
T Consensus 263 ~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~ 342 (393)
T 4gq1_A 263 IGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQ 342 (393)
T ss_dssp ETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEE
T ss_pred ecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEE
Confidence 6 799999999999999999998877665554332210 1122234444 344677888999999
Q ss_pred EEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC-EEEEcC
Q psy6127 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN-MAFWIP 510 (515)
Q Consensus 466 iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d-v~iW~~ 510 (515)
+||+.++++...+.. |..+|++++|+|||++||+++.+ +.+|.+
T Consensus 343 lwd~~~~~~~~~~~~-~~~~V~svafspdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 343 LINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp EEETTCTTCCEEEEE-CSSCEEEEEECTTSSEEEEEESSEEEEEEE
T ss_pred EEECCCCcEEEEecC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 999999988888777 88999999999999999999976 666654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=250.32 Aligned_cols=263 Identities=12% Similarity=0.168 Sum_probs=190.4
Q ss_pred CCcchhhc---cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcC
Q psy6127 155 GSWDFELL---HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSS 231 (515)
Q Consensus 155 ~~wd~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~sp 231 (515)
++|+..++ +.++++.+|...|..+.|.+.. ..+ -|+..=.-|...|.+++|+|
T Consensus 66 ~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------~~~-----------~~~~~~~~~~~~v~sla~sp 121 (356)
T 2w18_A 66 SLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDV-------------YNL-----------VCVALGNLEIREIRALFCSS 121 (356)
T ss_dssp EEEEESSSSBEEEEEEEECCSSCEEEECCCTTC-------------CSC-----------EEEEECSSSEEEEEEECC--
T ss_pred EEcccCCCccceeeEEEeccCceeEEEEEcCcc-------------cce-----------eeeeeccccccceEEEEECC
Confidence 88999998 7888999887777776665432 111 11122223567899999999
Q ss_pred C----CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC-CCCeeeEEecCC
Q psy6127 232 D----GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL-HDNKYVRYFPGH 306 (515)
Q Consensus 232 d----~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~-~~~~~~~~~~~h 306 (515)
| ++++++++. .+++|++.+++.+.+ ...+.|+.|++|++ .+++.+..+.+|
T Consensus 122 d~~~~~~~l~s~g~--~~~v~~l~~g~lv~s----------------------s~~g~d~~V~~~~~s~dG~~~~s~~~~ 177 (356)
T 2w18_A 122 DDESEKQVLLKSGN--IKAVLGLTKRRLVSS----------------------SGTLSDQQVEVMTFAEDGGGKENQFLM 177 (356)
T ss_dssp ----CCEEEEEEEE--EEEEEEETTTEEEEE----------------------ESSSTTCEEEEEEECTTSCEEEEEEEC
T ss_pred CccccccEEEeCCC--eEEEEecCCCcEEEe----------------------cccCCCCcEEEEEECCCCceeeeeccC
Confidence 9 999999884 478887654443322 11124778888887 447777777889
Q ss_pred CCCeEEEEEcC---CCCEEEEEeCCCcEEEEEcCCCCeEEEEecC----CCeeEEEECCCCCEE------------EEEE
Q psy6127 307 VRKVSSLNLSP---VDDSFISGSYDKTVRVWDLRQPNNVGMIQLS----GNKPIAAYDPEGLAF------------AIGV 367 (515)
Q Consensus 307 ~~~v~~l~~~~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~s~~~~~l------------~~g~ 367 (515)
...++.++|+| ++..|++|+.|++|++||+++++++.++..+ ..+.+++|+|+|.++ ++|+
T Consensus 178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs 257 (356)
T 2w18_A 178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRS 257 (356)
T ss_dssp CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------
T ss_pred CCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccC
Confidence 99999999999 7799999999999999999999999998532 235677999999886 5678
Q ss_pred CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEE
Q psy6127 368 NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEAT 447 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 447 (515)
.|+++++||..++..........+.+|...+.+..+ ++.++++++.|++|++||+.+++++.++.+|.... +..++
T Consensus 258 ~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~v--vs~va 333 (356)
T 2w18_A 258 PVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQH--WSFVK 333 (356)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CC--CCEEE
T ss_pred CCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCe--EEEEE
Confidence 899999999887542111111113344444444444 37799999999999999999999999998765431 44689
Q ss_pred EecCCCEEEEEeCCCcEEEEEC
Q psy6127 448 FTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 448 ~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
|+|||++|++|+.|++|+|||+
T Consensus 334 fSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 334 WSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ECSSSSEEEEECTTSCEEEEEE
T ss_pred ECCCCCEEEEEECCCcEEEecC
Confidence 9999999999999999999995
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=3e-31 Score=286.73 Aligned_cols=255 Identities=15% Similarity=0.158 Sum_probs=212.2
Q ss_pred ccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceee--eeEeeeeccccCCcEEEEEEcCC--CCEEEEEeC
Q psy6127 166 SSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVR--SYRVAKVFRENTDKINSLDYSSD--GSLLISCSD 241 (515)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~--~~~~~~~~~~h~~~I~~l~~spd--~~~lasgs~ 241 (515)
..+.+|...|.++.+.+... ..++++.++.+++|+ +. .+++...+.+|.++|++++|+|+ +++|++|+.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~-----~latg~~dg~I~vwd--~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~ 75 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFE--VEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 75 (753)
T ss_dssp -----CCCCEEEECCCSSSC-----CEEEEETTTEEEEEE--EETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET
T ss_pred eecccCcceeEEEEECCCCC-----eEEEEECCCcEEEEe--cCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC
Confidence 35678877788888876543 234677889999999 65 78889999999999999999998 999999999
Q ss_pred CCeEEEEECCCCe--eeeEecCCCCceeEEEEecC--CCeEEEEEeeCCCeEEEEECCCCe--eeEEecCCCCCeEEEEE
Q psy6127 242 DDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHS--KTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNL 315 (515)
Q Consensus 242 dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~l~~ 315 (515)
||.|++||+.+++ ....+..|...|.+++|+|+ +..+++++ .||.|++||+.++. ....+.+|...|.+++|
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE
T ss_pred CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEeecCCCceEEEEe
Confidence 9999999999887 77888899999999999999 77766654 79999999998873 44566789999999999
Q ss_pred cC-------------CCCEEEEEeCCCcEEEEEcCCCCe----EEEE-ecCCCeeEEEECCC---CCEEEEEECCCcEEE
Q psy6127 316 SP-------------VDDSFISGSYDKTVRVWDLRQPNN----VGMI-QLSGNKPIAAYDPE---GLAFAIGVNSDSIKL 374 (515)
Q Consensus 316 ~~-------------~~~~l~s~s~dg~i~iwd~~~~~~----~~~~-~~~~~~~~~~~s~~---~~~l~~g~~dg~i~i 374 (515)
+| +++.+++|+.||.|++||++++.. ...+ .+...+.+++|+|+ ++++++++.||.|++
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp CCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEE
T ss_pred cCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEE
Confidence 99 588999999999999999988743 3333 34567999999999 899999999999999
Q ss_pred EEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce
Q psy6127 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC 429 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 429 (515)
||++...............+...+++++|+|+|+++++++.||.|++|++.++..
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp EEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSC
T ss_pred ecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCC
Confidence 9999865433334444456778899999999999999999999999999986543
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=251.79 Aligned_cols=290 Identities=9% Similarity=0.055 Sum_probs=205.7
Q ss_pred CcchhhccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCE
Q psy6127 156 SWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSL 235 (515)
Q Consensus 156 ~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~ 235 (515)
+|++.+.+.+.++++|...+.+++|.+.... ++ +++.++ +++|+ ..+.+...... ...+..+++.++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~----la-~g~~~~-~~iw~--~~~~~~~~~~~--~~~~~~~~~~~~~~~ 72 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSC----LI-LSTLKS-FEIYN--VHPVAHIMSQE--MRHLSKVRMLHRTNY 72 (355)
T ss_dssp ----------------CCCCCEEEECTTSSE----EE-EECSSE-EEEEE--ETTEEEEEEEE--CSCCCEEEECTTSSE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCE----EE-EEcCCE-EEEEe--cCCcceeeeee--cCCeEEEEEcCCCCE
Confidence 5677788888888888777888888765431 33 455565 67998 66665554433 235888899998888
Q ss_pred E-EEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eeeEEecCCCCCeEEE
Q psy6127 236 L-ISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSL 313 (515)
Q Consensus 236 l-asgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~l 313 (515)
+ ++++.|++|++||..+++.+..+. +...|.+++|+++. ++++. ++.|++||+.++ +.+..+.. +...+
T Consensus 73 ~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~~---~~~i~i~d~~~~~~~~~~~~~---~~~~~ 143 (355)
T 3vu4_A 73 VAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVSY---GDVISVFKFGNPWKRITDDIR---FGGVC 143 (355)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEEE---TTEEEEEESSTTCCBSSCCEE---EEEEE
T ss_pred EEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEEE---cCEEEEEECCCCceeeEEecc---CCceE
Confidence 7 467788999999999999998887 55689999998764 44443 899999999988 66666554 45556
Q ss_pred EEcCCCCEEEE--EeCCCcEEEEEcCCCC----------------eEEEE-ecCCCeeEEEECCCCCEEEEEECCCc-EE
Q psy6127 314 NLSPVDDSFIS--GSYDKTVRVWDLRQPN----------------NVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDS-IK 373 (515)
Q Consensus 314 ~~~~~~~~l~s--~s~dg~i~iwd~~~~~----------------~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~-i~ 373 (515)
++++ ..++. |+.||.|++||+++++ .+..+ .+...+.+++|+|+|++|++|+.|++ |+
T Consensus 144 ~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~ 221 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR 221 (355)
T ss_dssp EEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEE
T ss_pred EEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEE
Confidence 7777 56665 5789999999999865 13444 55677999999999999999999998 99
Q ss_pred EEEeecCCCCCceeeec-C-CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE--Eee---------------
Q psy6127 374 LYDVRSYDKGPFASFKC-P-GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ--SLS--------------- 434 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~-~-~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~--~~~--------------- 434 (515)
+||+++++ .... . ..|...|.+++|+|++++|++++.|++|++||++.+.... .+.
T Consensus 222 iwd~~~~~-----~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 222 VFKTEDGV-----LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp EEETTTCC-----EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred EEECCCCc-----EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 99998765 3332 2 2378899999999999999999999999999997653211 110
Q ss_pred ---ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 435 ---GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 435 ---~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
...........++|+|+|+++++++.||.+++|++..
T Consensus 297 ~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 0111112246799999999999999999999998754
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=257.50 Aligned_cols=243 Identities=12% Similarity=0.071 Sum_probs=198.6
Q ss_pred ccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECC--CCeeeeEec--CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 219 ENTDKINSLDYSSDGSLL-ISCSDDDQIIIYDCE--QGTSKNTIN--SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~l-asgs~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
+|.+.|++++|+|++++| ++|+.||.|++||+. +++.+..+. .|...|.+++|+|++..+++++ .++.+++|+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~~g~v~~~~ 177 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD--KFGDVYSID 177 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE--TTSEEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe--CCCcEEEEe
Confidence 455689999999999996 899999999999999 888888876 5678899999999999887765 699999999
Q ss_pred CCCCeeeE----EecCCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCCEEE
Q psy6127 294 LHDNKYVR----YFPGHVRKVSSLNLSPV---DDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 294 ~~~~~~~~----~~~~h~~~v~~l~~~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~ 364 (515)
+.+++... .+.+|...|++++|+|+ +++|++|+.|+.|++||+++++.+..+ .+...+.+++|+ ++++|+
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 98877554 77889999999999999 889999999999999999999888774 456679999999 999999
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecC----------------------CCCCcCeEEEEEcCCCCEEEEEE-CCCcEEE
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCP----------------------GERGCEWTGLKFSPDGKLILVST-NGSIIRL 421 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~----------------------~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~i 421 (515)
+++.|+.|++||+++++.. ..+... ......+.+++|+|+++++++++ .++.|++
T Consensus 257 s~~~d~~v~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~i 334 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNL--STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIII 334 (450)
T ss_dssp EEESSSEEEEEETTTCCEE--EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEE
T ss_pred EEeCCCeEEEEECCCCcEe--eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEE
Confidence 9999999999999876421 111110 02345789999999999999999 8999999
Q ss_pred EEC--CCC---ceeEEeeccccCCCCCEEEEEecCCCEEEEEeC------CCcEEEEECC
Q psy6127 422 FDA--FNG---NCVQSLSGVLNNNASPLEATFTPDSQFVASGST------DGQVHIWNAE 470 (515)
Q Consensus 422 wd~--~~~---~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~------dg~I~iwd~~ 470 (515)
|++ .++ +.+..+..+ ..+.+++|+|++.++++++. +..|.+|.+.
T Consensus 335 w~~~~~~~~~l~~~~~~~~~----~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 335 LEMSEKQKGDLALKQIITFP----YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEECSSSTTCEEEEEEEECS----SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEeccCCCCceeeccEeccC----CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 999 565 555556553 44999999996544444443 4557888654
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-30 Score=255.47 Aligned_cols=246 Identities=11% Similarity=0.052 Sum_probs=175.9
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-----eEecCCCCceeEEEEec--------CCCeEEEEEe
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-----NTINSKKYGVDLIKFTH--------SKTTAIHAST 283 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~s~ 283 (515)
...|...+....+++++.+||+|+.|++|+|||..+++.. ..+.+|.+.|.+++|+| +++.++ ++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~la--s~ 162 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIA--SV 162 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEE--EE
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEE--EE
Confidence 4466777777778889999999999999999999987653 34679999999999998 454444 44
Q ss_pred eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEE-----------------
Q psy6127 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMI----------------- 345 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~----------------- 345 (515)
+.|++|++||+.++.++..+.+|..+|.+++|+|++. +|++|+.|++|++||+++++.....
T Consensus 163 s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 163 GDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp ETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred ECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence 6899999999999988888888999999999999875 7999999999999999987654332
Q ss_pred ---------ecCCCeeEEEEC-CCCCEEEEEECCCcEEEEEeecCCCCCcee--------------eecCCCCCcCeEEE
Q psy6127 346 ---------QLSGNKPIAAYD-PEGLAFAIGVNSDSIKLYDVRSYDKGPFAS--------------FKCPGERGCEWTGL 401 (515)
Q Consensus 346 ---------~~~~~~~~~~~s-~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~--------------~~~~~~~~~~i~~l 401 (515)
.+...+.++.|+ |+++.+++++.|+++++||+.......... ..........+ ..
T Consensus 243 ~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 321 (393)
T 4gq1_A 243 PLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL-GA 321 (393)
T ss_dssp GGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS-CC
T ss_pred cceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce-eE
Confidence 122346677775 899999999999999999998654211100 00001111122 23
Q ss_pred EEcC--CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 402 KFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 402 ~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
.|+| ++.++++|+.||.|++||+.++++...+..+. .+|.+++|+|||++||+++.+| +.+|.+
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~---~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG---MPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS---SCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC---CcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 4444 34466778889999999999998887776644 3599999999999999998777 656654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=233.33 Aligned_cols=292 Identities=11% Similarity=0.086 Sum_probs=199.0
Q ss_pred eEeeeeccccCC----cEEEEEEcCCCC---EEEEEeCCCeEEEEECCCC---eeeeEecCCCCceeEEEEecCCCeEEE
Q psy6127 211 YRVAKVFRENTD----KINSLDYSSDGS---LLISCSDDDQIIIYDCEQG---TSKNTINSKKYGVDLIKFTHSKTTAIH 280 (515)
Q Consensus 211 ~~~~~~~~~h~~----~I~~l~~spd~~---~lasgs~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~ 280 (515)
.+++..++...+ .+.++-|-..|- .+++++. ..|++|+..++ +.+++++.|+.+|..+.+.|+...+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 103 (356)
T 2w18_A 25 LQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVC 103 (356)
T ss_dssp EEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEE
T ss_pred eeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceee
Confidence 444555554433 244555544433 6788876 68999999998 899999999999999999998877777
Q ss_pred EEeeCCCeEEEEEC--CCC----eeeEEecCCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEcC-CCCeEEEE-ecCCC
Q psy6127 281 ASTKVDATLRYLSL--HDN----KYVRYFPGHVRKVSSLNLSPVDDSFISGS--YDKTVRVWDLR-QPNNVGMI-QLSGN 350 (515)
Q Consensus 281 ~s~~~d~~v~vwd~--~~~----~~~~~~~~h~~~v~~l~~~~~~~~l~s~s--~dg~i~iwd~~-~~~~~~~~-~~~~~ 350 (515)
++-+.-..-.++-+ ... .......+|...|..+ ++++.+.+++ .|+.|++|++. +++.+..+ .+...
T Consensus 104 ~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~ 180 (356)
T 2w18_A 104 VALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPE 180 (356)
T ss_dssp EEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCS
T ss_pred eeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCc
Confidence 66332222122211 111 1122223455555554 4555555543 59999999994 47766655 44556
Q ss_pred eeEEEECC---CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEE------------EEEEC
Q psy6127 351 KPIAAYDP---EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI------------LVSTN 415 (515)
Q Consensus 351 ~~~~~~s~---~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l------------~~~s~ 415 (515)
+..++|+| ++..|++++.|++|++||+++++ ....+.....+...+.+++|+|+|+++ ++|+.
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--EEEEEECCC---CCCEEEEEEETTEEEEEEC------------C
T ss_pred eeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 88999999 78999999999999999999865 112222111223467788999999886 56778
Q ss_pred CCcEEEEECCCCceeEEeec--cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeE-EEEEC
Q psy6127 416 GSIIRLFDAFNGNCVQSLSG--VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQ-SLQFN 492 (515)
Q Consensus 416 dg~i~iwd~~~~~~~~~~~~--~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~-~l~~s 492 (515)
|++|++||..+++.+..+.. ..++...+. ..+.++.++++|+.|++|+|||+.+++++.++.+ |.+.+. .++|+
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafS 335 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRFL--EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWS 335 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCEE--EEEEETTEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEEC
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCcceeE--ccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEEC
Confidence 99999999999988766531 112222233 3334488999999999999999999999999988 776655 68999
Q ss_pred CCCCEEEEeeCC--EEEEcCC
Q psy6127 493 PKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 493 p~~~~las~~~d--v~iW~~~ 511 (515)
|||++|++|+.| ++||++.
T Consensus 336 PDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 336 GTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SSSSEEEEECTTSCEEEEEEC
T ss_pred CCCCEEEEEECCCcEEEecCC
Confidence 999999999865 9999863
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-30 Score=249.59 Aligned_cols=261 Identities=10% Similarity=0.066 Sum_probs=204.3
Q ss_pred eeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC---------CCeeeeEec-
Q psy6127 191 LAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE---------QGTSKNTIN- 260 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~---------~~~~~~~~~- 260 (515)
+.++++.|+.+++|| ...++++..+. ...|.++.|+|+ +++|+.|++|++|+.. +++.+..+.
T Consensus 50 ~l~sg~~Dg~v~iwd--~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQ--LKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp EEEEEEETTEEEEEE--ESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcEEEEE--CCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 445888999999999 77777777766 577888999998 9999999999999765 444444443
Q ss_pred CCCCceeEEEEec--CCCeEEEEEeeCCCeEEEEECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy6127 261 SKKYGVDLIKFTH--SKTTAIHASTKVDATLRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337 (515)
Q Consensus 261 ~~~~~v~~~~~~~--~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~ 337 (515)
.|...|.+++|+| +++.+++++ .|++|++||+++++...... .|...+.+++|+|++.+|++|+.||.|++||++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 6678899999999 888776654 79999999999999877664 455689999999999999999999999999999
Q ss_pred CCCeE-EEEe--cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCe--EEEEEcCCCCEEEE
Q psy6127 338 QPNNV-GMIQ--LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW--TGLKFSPDGKLILV 412 (515)
Q Consensus 338 ~~~~~-~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i--~~l~~sp~~~~l~~ 412 (515)
+++.. ..+. +...+.+++|+|++.+|++++ ++.|++||++..... ..+.....+...+ .+++|+|+|++|++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT--LAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC--BSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc--eeecccccccccccceEEEECCCCCEEEE
Confidence 99887 6664 467899999999999999999 559999999986421 1111111122222 46999999999999
Q ss_pred EEC-CCcEEEEECCCCceeEEeeccccCCCCCEEEEEec---CCCEEEEEeCCCcEEEEECC
Q psy6127 413 STN-GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP---DSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 413 ~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp---~g~~l~sgs~dg~I~iwd~~ 470 (515)
++. |+.+++|++.+....... .++..++|+| +++.+++++.||.+.++-..
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred ecCCCCcEEEEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 998 999999999766543322 1266788888 88899999999999887543
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-28 Score=251.17 Aligned_cols=310 Identities=14% Similarity=0.094 Sum_probs=242.6
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCCeeeeEecCCCCceeEEE
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDC--EQGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~ 270 (515)
.+...++.+.+|| ..+++++.++..+.. +.+++|+|||++|++++.|++|++||+ .+++.+.++.. ...+..++
T Consensus 153 vs~~~d~~V~v~D--~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va 228 (543)
T 1nir_A 153 VTLRDAGQIALVD--GDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVE 228 (543)
T ss_dssp EEEGGGTEEEEEE--TTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEE
T ss_pred EEEcCCCeEEEEE--CCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEE
Confidence 4667788899999 778888888884333 899999999999999999999999999 88998888884 45689999
Q ss_pred Eec----CCCeEEEEEeeCCCeEEEEECCCCeeeEEecC----------CC-CCeEEEEEcCCCC-EEEEEeCCCcEEEE
Q psy6127 271 FTH----SKTTAIHASTKVDATLRYLSLHDNKYVRYFPG----------HV-RKVSSLNLSPVDD-SFISGSYDKTVRVW 334 (515)
Q Consensus 271 ~~~----~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~----------h~-~~v~~l~~~~~~~-~l~s~s~dg~i~iw 334 (515)
|+| +++.+++++ ..+++|.+||..+++++..+.. |. ..+.++.++|+++ ++++...++.|.+|
T Consensus 229 ~sp~~~~dg~~l~v~~-~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vv 307 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGA-YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV 307 (543)
T ss_dssp ECCSTTCTTTEEEEEE-EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred eCCCcCCCCCEEEEEE-ccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEE
Confidence 999 999988776 3589999999999999888764 22 3789999999877 56677788999999
Q ss_pred EcCCCCeEE--EEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeec-CCCCCcCeEEEEEcCC-CCE
Q psy6127 335 DLRQPNNVG--MIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKC-PGERGCEWTGLKFSPD-GKL 409 (515)
Q Consensus 335 d~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp~-~~~ 409 (515)
|+.+.+.+. .+.....+..++|+|+|+++++++ .+++|.+||..+++. ...+.. ...|......+ ++|+ +..
T Consensus 308 d~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l--~~~i~~g~~ph~g~g~~~-~~p~~g~~ 384 (543)
T 1nir_A 308 NYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALVDVGKTPHPGRGANF-VHPKYGPV 384 (543)
T ss_dssp ECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSBCCTTCEEE-EETTTEEE
T ss_pred EecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE--EEeeccCCCCCCCCCccc-CCCCCccE
Confidence 998876544 455555678899999999877655 589999999987642 122221 11243333233 5777 555
Q ss_pred EEEEE-CCCcEEEEECCC-------CceeEEeeccccCCCCCEEEEEecCCCEEEEEe-------CCCcEEEEECCCCeE
Q psy6127 410 ILVST-NGSIIRLFDAFN-------GNCVQSLSGVLNNNASPLEATFTPDSQFVASGS-------TDGQVHIWNAERGYK 474 (515)
Q Consensus 410 l~~~s-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-------~dg~I~iwd~~~~~~ 474 (515)
++++. .|++|.+||+.+ +++++++..+... +..++++|+|++|++++ .+++|.+||+.+++.
T Consensus 385 ~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~---~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 385 WSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG---SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC---CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC---ceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 66665 579999999998 8889998875543 67899999999999987 267999999999887
Q ss_pred E-EEEc-------CCCCCCeEEEEECCCCCEEEEee-------CCEEEEcCCCC
Q psy6127 475 V-CVLD-------GDHPSAVQSLQFNPKYHMLASAC-------SNMAFWIPTLS 513 (515)
Q Consensus 475 ~-~~~~-------~~h~~~V~~l~~sp~~~~las~~-------~dv~iW~~~~~ 513 (515)
. ..+. ..+...+..++|+|+|+.+..+. +.+.|||..+.
T Consensus 462 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 462 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 7 4431 23678899999999999988652 34999998753
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-28 Score=245.11 Aligned_cols=278 Identities=13% Similarity=0.142 Sum_probs=220.2
Q ss_pred EEEEcccee--eeeEee--eeccccCCcEEEEEEcC--------------CCCEEEEEeCC------CeEEEEECCCCee
Q psy6127 200 ITKCSENLV--RSYRVA--KVFRENTDKINSLDYSS--------------DGSLLISCSDD------DQIIIYDCEQGTS 255 (515)
Q Consensus 200 ~i~~wd~~~--~~~~~~--~~~~~h~~~I~~l~~sp--------------d~~~lasgs~d------g~i~iwd~~~~~~ 255 (515)
.+++|| + .+++++ ..+.+|...+..+++++ .+..++.++.+ ++|++||.. +..
T Consensus 94 ~i~lwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~ 170 (415)
T 2hqs_A 94 AYQLVD--TGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYN 170 (415)
T ss_dssp EEEEEE--CSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCS
T ss_pred EEEEEe--CCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCC
Confidence 789999 6 666666 56899999998888875 25667766654 799999997 556
Q ss_pred eeEecCCCCceeEEEEecCCCeEEEEEeeCC---CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEE-EEeCCCc-
Q psy6127 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVD---ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI-SGSYDKT- 330 (515)
Q Consensus 256 ~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d---~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~s~dg~- 330 (515)
...+..|...+.+++|+|+++.+++++ .+ ..|++||+.+++.. .+..|...+.+++|+|||+.|+ +++.|+.
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s--~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVT--FESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSL 247 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEE--CTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEE--ecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCc
Confidence 677888899999999999999988876 34 49999999998875 4667888999999999999887 6666655
Q ss_pred -EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CC--cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC
Q psy6127 331 -VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SD--SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 331 -i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
|++||+++++......+...+..++|+|+|+.|++++. ++ .|.+||+.+++ .. ....+...+.+++|+|+
T Consensus 248 ~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-----~~-~l~~~~~~~~~~~~spd 321 (415)
T 2hqs_A 248 NLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-----PQ-RITWEGSQNQDADVSSD 321 (415)
T ss_dssp EEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-----CE-ECCCSSSEEEEEEECTT
T ss_pred eEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-----EE-EEecCCCcccCeEECCC
Confidence 99999999887554455666889999999999998886 45 56666776643 11 12234457889999999
Q ss_pred CCEEEEEECC---CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC---cEEEEECCCCeEEEEEcC
Q psy6127 407 GKLILVSTNG---SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG---QVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 407 ~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg---~I~iwd~~~~~~~~~~~~ 480 (515)
|++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|+|++|++++.++ .|++||+. +.....+..
T Consensus 322 G~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~ 395 (415)
T 2hqs_A 322 GKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPA 395 (415)
T ss_dssp SSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS----SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCC
T ss_pred CCEEEEEECcCCceEEEEEECCCCCEE-EecCCC----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeC
Confidence 9999988764 58999999988764 343322 489999999999999888776 79999987 555667777
Q ss_pred CCCCCeEEEEECCCCC
Q psy6127 481 DHPSAVQSLQFNPKYH 496 (515)
Q Consensus 481 ~h~~~V~~l~~sp~~~ 496 (515)
|.+.|.+++|+|...
T Consensus 396 -~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 396 -TDGQVKFPAWSPYLH 410 (415)
T ss_dssp -SSSEEEEEEECCCCC
T ss_pred -CCCCCcCCccccccc
Confidence 899999999999643
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-27 Score=241.99 Aligned_cols=325 Identities=12% Similarity=0.097 Sum_probs=242.1
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCC-ceeEEEEEEeeccccceeeeeeeCCCCcEEEEcccee--e
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESP-HFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLV--R 209 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~--~ 209 (515)
++++++..++.| .+||..+++.+.+++.+ .....+++++++. +. +++.+..+.+|| + .
T Consensus 150 ~~~vs~~~d~~V----------~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~------l~-v~~~d~~V~v~D--~~~~ 210 (543)
T 1nir_A 150 LFSVTLRDAGQI----------ALVDGDSKKIVKVIDTGYAVHISRMSASGRY------LL-VIGRDARIDMID--LWAK 210 (543)
T ss_dssp EEEEEEGGGTEE----------EEEETTTCCEEEEEECSTTEEEEEECTTSCE------EE-EEETTSEEEEEE--TTSS
T ss_pred EEEEEEcCCCeE----------EEEECCCceEEEEEecCcccceEEECCCCCE------EE-EECCCCeEEEEE--CcCC
Confidence 456666667777 99999999999999844 4223334444443 22 334458899999 6 6
Q ss_pred eeEeeeeccccCCcEEEEEEcC----CCCEEEEEeC-CCeEEEEECCCCeeeeEecCC-----------CCceeEEEEec
Q psy6127 210 SYRVAKVFRENTDKINSLDYSS----DGSLLISCSD-DDQIIIYDCEQGTSKNTINSK-----------KYGVDLIKFTH 273 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~sp----d~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~ 273 (515)
+++++.++.. ...+..++|+| ||++|++++. +++|.+||..+++++..+..+ ...+..+.++|
T Consensus 211 t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 211 EPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp SCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred CCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC
Confidence 7888888874 45679999999 9999999984 899999999999998888652 23688999999
Q ss_pred CCCeEEEEEeeCCCeEEEEECCCCeeeE--EecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEEEEecC--
Q psy6127 274 SKTTAIHASTKVDATLRYLSLHDNKYVR--YFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVGMIQLS-- 348 (515)
Q Consensus 274 ~~~~l~~~s~~~d~~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~-- 348 (515)
++..+++.. ..++.|.+||..+.+.+. .+ .+...+.++.|+|+|+++++++ .+++|.+||..+++.+..+...
T Consensus 290 ~~~~~~vs~-~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ 367 (543)
T 1nir_A 290 EHPEFIVNV-KETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT 367 (543)
T ss_dssp SSSEEEEEE-TTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred CCCEEEEEE-CCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC
Confidence 988776655 679999999998866443 33 3566788999999999776554 5899999999999988887532
Q ss_pred ---CCeeEEEECCC-CCEEEEEE-CCCcEEEEEeecCCC--CCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-------
Q psy6127 349 ---GNKPIAAYDPE-GLAFAIGV-NSDSIKLYDVRSYDK--GPFASFKCPGERGCEWTGLKFSPDGKLILVST------- 414 (515)
Q Consensus 349 ---~~~~~~~~s~~-~~~l~~g~-~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s------- 414 (515)
+....+ ++|+ +..++++. .+++|.+||+.+... ...........+...+..++++|++++|++++
T Consensus 368 ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~ 446 (543)
T 1nir_A 368 PHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDAR 446 (543)
T ss_dssp BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHH
T ss_pred CCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcc
Confidence 112222 4677 55566665 579999999987221 00123333334555566899999999999987
Q ss_pred CCCcEEEEECCCCcee-EEeec-----cccCCCCCEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeEEEEEcC
Q psy6127 415 NGSIIRLFDAFNGNCV-QSLSG-----VLNNNASPLEATFTPDSQFVASGS-----TDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~-~~~~~-----~~~~~~~i~~~~~sp~g~~l~sgs-----~dg~I~iwd~~~~~~~~~~~~ 480 (515)
.+++|.+||+.+++.. ..+.. ...+...+..+.|+|+|+.++++. .|+.|.|||.++++++.+++.
T Consensus 447 ~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 447 ISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp HHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred cCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence 2679999999999877 44321 122344589999999999988763 479999999999999999985
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-27 Score=234.43 Aligned_cols=277 Identities=13% Similarity=0.127 Sum_probs=214.7
Q ss_pred CCcEEEEEEcCCCC-EEEEEe----CCC----eEEEEEC--CCCeee--eEecCCCCceeEEEEec--------------
Q psy6127 221 TDKINSLDYSSDGS-LLISCS----DDD----QIIIYDC--EQGTSK--NTINSKKYGVDLIKFTH-------------- 273 (515)
Q Consensus 221 ~~~I~~l~~spd~~-~lasgs----~dg----~i~iwd~--~~~~~~--~~~~~~~~~v~~~~~~~-------------- 273 (515)
...+...+|++.|. ++++|+ .|| ++++||+ .+++.+ ..+.+|...+..+++.+
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 35677888988774 666876 467 9999999 888877 45788888787777765
Q ss_pred CCCeEEEEEee-CC---CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEcCCCCeEEEEe
Q psy6127 274 SKTTAIHASTK-VD---ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK---TVRVWDLRQPNNVGMIQ 346 (515)
Q Consensus 274 ~~~~l~~~s~~-~d---~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~ 346 (515)
.+..+++++.. .+ +.|++||+.. .....+.+|...+.+++|+|+|+.|++++.|+ .|++||+++++......
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~ 220 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS 220 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec
Confidence 25666666632 12 7999999974 55677778999999999999999999999885 99999999998876666
Q ss_pred cCCCeeEEEECCCCCEEE-EEECCCc--EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CC--cEE
Q psy6127 347 LSGNKPIAAYDPEGLAFA-IGVNSDS--IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-GS--IIR 420 (515)
Q Consensus 347 ~~~~~~~~~~s~~~~~l~-~g~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg--~i~ 420 (515)
+...+.+++|+|+|+.|+ +++.++. |++||+++++ . .....+...+.+++|+|||++|++++. ++ .|+
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-----~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-----I-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----E-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-----E-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 667789999999999888 5555554 8899987753 2 223345678899999999999998886 44 688
Q ss_pred EEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC---CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCE
Q psy6127 421 LFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD---GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHM 497 (515)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 497 (515)
+||+.+++.. .+..+ ...+..++|+|+|++|++++.+ +.|++||+.+++.. .+.. +. .+.+++|+|+|++
T Consensus 295 ~~d~~~~~~~-~l~~~---~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~-~~-~~~~~~~spdg~~ 367 (415)
T 2hqs_A 295 KVNINGGAPQ-RITWE---GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSS-TF-LDETPSLAPNGTM 367 (415)
T ss_dssp EEETTSSCCE-ECCCS---SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCC-SS-SCEEEEECTTSSE
T ss_pred EEECCCCCEE-EEecC---CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecC-CC-CcCCeEEcCCCCE
Confidence 8898887643 33322 2347889999999999988764 58999999998874 4544 43 8999999999999
Q ss_pred EEEeeC-----CEEEEcCC
Q psy6127 498 LASACS-----NMAFWIPT 511 (515)
Q Consensus 498 las~~~-----dv~iW~~~ 511 (515)
|++++. .+.+|+++
T Consensus 368 l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp EEEEEEETTEEEEEEEETT
T ss_pred EEEEEcCCCccEEEEEECC
Confidence 888763 36777765
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-25 Score=218.35 Aligned_cols=279 Identities=13% Similarity=0.134 Sum_probs=210.2
Q ss_pred EEcCCCCE-EEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee-eEEecC
Q psy6127 228 DYSSDGSL-LISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY-VRYFPG 305 (515)
Q Consensus 228 ~~spd~~~-lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~-~~~~~~ 305 (515)
.|.+++++ +++++.++.|++||..+++....+..+...+ .++|+|+++.+++++ ..++.|.+||..+++. ...+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~-~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTS-DFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEE-STTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEe-CCCCeEEEEECCCCceeEEeccc
Confidence 46665555 6777889999999999999988887776677 999999999887776 3588999999999987 777776
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEE-EECCCc-EEEEEeecC
Q psy6127 306 HVRKVSSLNLSPVDDSFISGSYDK---TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAI-GVNSDS-IKLYDVRSY 380 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-g~~dg~-i~i~d~~~~ 380 (515)
+..+..+++|+|++++++++..++ .|.+||+.+++.+..+........++|+|+|+++++ ...++. +.+|++...
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 766666699999999998555553 899999999999888887777899999999985554 456688 999998753
Q ss_pred CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCce---eEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 381 DKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNC---VQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~---~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
........... ........++|+|+|+++++++ .++.|++||+.+++. +..+... ..+..++|+|+|++++
T Consensus 162 g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 162 GVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN----NLPGTIVVSRDGSTVY 236 (331)
T ss_dssp CCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS----SCCCCEEECTTSSEEE
T ss_pred CcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC----CCCceEEECCCCCEEE
Confidence 21111101111 2334578999999999776655 688999999999987 6666532 3368899999999776
Q ss_pred EEe-CCCcEEEEECCCCeE--EEEEcCC---CCC---CeEEEEECCCCCEEEEeeC---CEEEEcCCCC
Q psy6127 457 SGS-TDGQVHIWNAERGYK--VCVLDGD---HPS---AVQSLQFNPKYHMLASACS---NMAFWIPTLS 513 (515)
Q Consensus 457 sgs-~dg~I~iwd~~~~~~--~~~~~~~---h~~---~V~~l~~sp~~~~las~~~---dv~iW~~~~~ 513 (515)
+++ .++.|.+||..+++. +..+... +.. ....++|+||+++|+.++. .+.+|+++..
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 665 578899999999987 4443321 122 2356899999998876653 3999998753
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-26 Score=248.37 Aligned_cols=282 Identities=13% Similarity=0.106 Sum_probs=219.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-CC-----eEEEEECCCCeeeeEecCCCC------------------------ceeEEE
Q psy6127 221 TDKINSLDYSSDGSLLISCSD-DD-----QIIIYDCEQGTSKNTINSKKY------------------------GVDLIK 270 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~-dg-----~i~iwd~~~~~~~~~~~~~~~------------------------~v~~~~ 270 (515)
...|.+++|||||++|++++. |+ .|++||+.+++....+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 999999999988777665433 378999
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCe--eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS 348 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 348 (515)
|+|||+.+++++ ++.|++||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++........
T Consensus 116 ~SpDg~~l~~~~---~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 116 WSPDAQRLLFPL---GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp ECTTSSEEEEEE---TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred ECCCCCEEEEEe---CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 999999998876 4999999999873 4456777888999999999999999887 469999999988766544332
Q ss_pred CC-----------------eeEEEECCCCCEEEEEECCC---------------------------------cEEEEEee
Q psy6127 349 GN-----------------KPIAAYDPEGLAFAIGVNSD---------------------------------SIKLYDVR 378 (515)
Q Consensus 349 ~~-----------------~~~~~~s~~~~~l~~g~~dg---------------------------------~i~i~d~~ 378 (515)
.. +..++|+|||++|++++.|+ .|.+||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 21 36799999999999987665 78888887
Q ss_pred c-CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-----CCcEEEEECCCCceeEEeeccccC-CCCCEEEEEecC
Q psy6127 379 S-YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-----GSIIRLFDAFNGNCVQSLSGVLNN-NASPLEATFTPD 451 (515)
Q Consensus 379 ~-~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-----dg~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp~ 451 (515)
+ ++. ..+.....+...+..++| |||++|++++. +..|++||+.+++....+..+... ...+..++|+||
T Consensus 272 ~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 272 EQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp TTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred CCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 6 542 122212246678899999 99999987764 567999999999887766654321 112467899999
Q ss_pred CCEEEEEeCCCcEEEEECC-CCeEEEEEcCCCCCCeEEE-EECCCCCEEEEee-C----CEEEEcCCC
Q psy6127 452 SQFVASGSTDGQVHIWNAE-RGYKVCVLDGDHPSAVQSL-QFNPKYHMLASAC-S----NMAFWIPTL 512 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~l-~~sp~~~~las~~-~----dv~iW~~~~ 512 (515)
|+++++++.||.++||.++ +++ ...+.. |...|..+ .|+|+++.++..+ . .++||+++.
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~-~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTH-GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCC-SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeee-cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 9999999999988888765 455 666766 77788887 5999998775543 2 588998865
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.8e-25 Score=213.73 Aligned_cols=272 Identities=13% Similarity=0.103 Sum_probs=219.0
Q ss_pred cCCcEEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 220 NTDKINSLDYSSDGSLLISCSD-------DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
....+..++|+|+++++++++. ++.|.+||..+++....+... ..+..++|+|+++.++++. ..++.|.+|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~-~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGN-TVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEE-TTTTEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEe-cCCCEEEEE
Confidence 3456889999999999988874 568999999999988887654 4478899999999877766 468999999
Q ss_pred ECCCCeeeEEecCCCCC---------eEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCC
Q psy6127 293 SLHDNKYVRYFPGHVRK---------VSSLNLSPVDDSFISGS--YDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEG 360 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~---------v~~l~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~ 360 (515)
|..+++.+..+..+... +.+++|+|+++.+++++ .++.|.+||.++++....+. ....+..++|+|++
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 99999988877654432 78999999999877776 47899999999999988887 44557889999999
Q ss_pred CEEEEEECCCcEEEEEeecCCCCCceeeec-CCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCCceeEEeecccc
Q psy6127 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKC-PGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAFNGNCVQSLSGVLN 438 (515)
Q Consensus 361 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~~~~~~~~~~~~~~ 438 (515)
+.+++++.++.+.+||..+++. ...... ...+...+.+++|+|+++++++++. ++.|.+||..+++.+..+....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 273 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKI--LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE- 273 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEE--EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-
T ss_pred CEEEEEcCCCeEEEEECCCCeE--EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-
Confidence 9999999999999999887541 112222 1124456778999999998877765 4899999999999887776432
Q ss_pred CCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 439 NNASPLEATFTPDSQFVASGS-TDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
...++|+|+|+++++++ .++.|.+||..+++.+..+.. ...+.+++|+|++++++.+.
T Consensus 274 ----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 274 ----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT--PTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp ----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC--CSEEEEEEECTTSCEEEEEE
T ss_pred ----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec--CCCCCeEEEcCCCCEEEEEE
Confidence 25699999999766655 689999999999999988874 45789999999999666554
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-26 Score=246.33 Aligned_cols=297 Identities=11% Similarity=0.076 Sum_probs=219.2
Q ss_pred EEEEccceeeeeEeeeeccccCC------------------------cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-
Q psy6127 200 ITKCSENLVRSYRVAKVFRENTD------------------------KINSLDYSSDGSLLISCSDDDQIIIYDCEQGT- 254 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~h~~------------------------~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~- 254 (515)
.+++|+ +..++....+..|.. .|.+++|||||++|++++. +.|++||+.++.
T Consensus 65 ~i~~~d--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~ 141 (741)
T 2ecf_A 65 DLWSYD--IGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK 141 (741)
T ss_dssp EEEEEE--TTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCST
T ss_pred EEEEEE--CCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCc
Confidence 789998 666666666655433 3889999999999999987 999999999873
Q ss_pred -eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCC----------------eEEEEEcC
Q psy6127 255 -SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRK----------------VSSLNLSP 317 (515)
Q Consensus 255 -~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~----------------v~~l~~~~ 317 (515)
....+..+...+..++|+|+|+.+++++ ++.|++||+.+++.......+... +.+++|+|
T Consensus 142 ~~~~~l~~~~~~~~~~~~SPDG~~la~~~---~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp 218 (741)
T 2ecf_A 142 AAVRQLTHGEGFATDAKLSPKGGFVSFIR---GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP 218 (741)
T ss_dssp TSCCBCCCSSSCEEEEEECTTSSEEEEEE---TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT
T ss_pred ceEEEcccCCcccccccCCCCCCEEEEEe---CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECC
Confidence 4556777888899999999999988876 679999999998877655544432 47899999
Q ss_pred CCCEEEEEeCCC---------------------------------cEEEEEcCC-CCeEEEEe---cCCCeeEEEECCCC
Q psy6127 318 VDDSFISGSYDK---------------------------------TVRVWDLRQ-PNNVGMIQ---LSGNKPIAAYDPEG 360 (515)
Q Consensus 318 ~~~~l~s~s~dg---------------------------------~i~iwd~~~-~~~~~~~~---~~~~~~~~~~s~~~ 360 (515)
||+.|++++.|+ .|.+||+.+ ++...... +...+..++| |||
T Consensus 219 Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg 297 (741)
T 2ecf_A 219 DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDP 297 (741)
T ss_dssp TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EET
T ss_pred CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCC
Confidence 999999988766 789999998 87655432 3345778999 999
Q ss_pred CEEEEEEC-----CCcEEEEEeecCCCCCceeeecCC-CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC-CCceeEEe
Q psy6127 361 LAFAIGVN-----SDSIKLYDVRSYDKGPFASFKCPG-ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF-NGNCVQSL 433 (515)
Q Consensus 361 ~~l~~g~~-----dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~-~~~~~~~~ 433 (515)
+.|++++. +..|++||+.+++... ...... .....+..++|+|||+++++++.++.+++|.+. +++ ...+
T Consensus 298 ~~l~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 298 QHLSFQRQSRDQKKLDLVEVTLASNQQRV--LAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp TEEEEEEEETTSSEEEEEEEETTTCCEEE--EEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES
T ss_pred CEEEEEEecccCCeEEEEEEECCCCceEE--EEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee
Confidence 99998764 5679999988754211 111111 000134578999999988888899988888765 344 5555
Q ss_pred eccccCCCCCEEE-EEecCCCEEEE-EeCCC--cEEEEECCC-CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC-----
Q psy6127 434 SGVLNNNASPLEA-TFTPDSQFVAS-GSTDG--QVHIWNAER-GYKVCVLDGDHPSAVQSLQFNPKYHMLASACS----- 503 (515)
Q Consensus 434 ~~~~~~~~~i~~~-~~sp~g~~l~s-gs~dg--~I~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~----- 503 (515)
..+ ...+..+ .|+|+|+.|+. ++.++ .+++|++.. +.....+.. ...+..++|+||++.++....
T Consensus 375 ~~~---~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p 449 (741)
T 2ecf_A 375 THG---NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK--APGMHSASFARNASVYVDSWSNNSTP 449 (741)
T ss_dssp CCS---SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC--SCSEEEEEECTTSSEEEEEEEETTEE
T ss_pred eec---ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc--CCCceEEEECCCCCEEEEEecCCCCC
Confidence 543 3336676 59999987754 45555 899999864 555555653 567899999999998887542
Q ss_pred -CEEEEcCC
Q psy6127 504 -NMAFWIPT 511 (515)
Q Consensus 504 -dv~iW~~~ 511 (515)
.+.+|+.+
T Consensus 450 ~~~~l~~~~ 458 (741)
T 2ecf_A 450 PQIELFRAN 458 (741)
T ss_dssp EEEEEEETT
T ss_pred CeEEEEEcC
Confidence 26667653
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-25 Score=248.48 Aligned_cols=275 Identities=13% Similarity=0.062 Sum_probs=218.6
Q ss_pred eccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ-GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
.+.+|...+.++.|+++ .++++++.|++++||.+.. +.....+..|. .+...+|+|+|+.++++. ++.|++||+
T Consensus 198 ~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~---~~~i~~~d~ 272 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK---GGSIYIFNP 272 (1045)
T ss_dssp EEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE---TTEEEEECT
T ss_pred ECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe---CCEEEEecC
Confidence 34688999999999998 6777888889999998753 44555666554 467789999999888764 899999999
Q ss_pred CCCeeeEEecC-----------CCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC-CeeEEEECCCCC
Q psy6127 295 HDNKYVRYFPG-----------HVRKVSSLNLS-PVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG-NKPIAAYDPEGL 361 (515)
Q Consensus 295 ~~~~~~~~~~~-----------h~~~v~~l~~~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~s~~~~ 361 (515)
...+ +..+.+ |...+.+++|+ |||+.+++++ ++.+.+|++..++......+.. .+..++|+ +|+
T Consensus 273 ~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~ 349 (1045)
T 1k32_A 273 DTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKV 349 (1045)
T ss_dssp TTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEE
T ss_pred CceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCC
Confidence 5444 335554 34478999999 9999998887 7899999998887655434444 57889999 999
Q ss_pred EEEEEECCCcEE-EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC
Q psy6127 362 AFAIGVNSDSIK-LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 362 ~l~~g~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
.+++++.++.+. +||+.... ..... .+...+..++|+|||++|++++.++.+++||+.+++.......+.
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~-----~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~--- 420 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGK-----AEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE--- 420 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCC-----EEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS---
T ss_pred eEEEEECCCceEEEEECCCCC-----ceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC---
Confidence 999999888888 88877643 22222 566788999999999999999999999999999998877665543
Q ss_pred CCCEEEEEecCCCEEEEEeCCC----------cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEE
Q psy6127 441 ASPLEATFTPDSQFVASGSTDG----------QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFW 508 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs~dg----------~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW 508 (515)
..+..++|+|||++|++++.++ .|++||+.+++ ...+.. |...+.+++|+|||+.|+.++.+ .++|
T Consensus 421 ~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~-~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 421 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT-ENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC-SSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC-CCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 3478999999999998887654 89999999887 566666 88889999999999999887753 5556
Q ss_pred c
Q psy6127 509 I 509 (515)
Q Consensus 509 ~ 509 (515)
+
T Consensus 499 ~ 499 (1045)
T 1k32_A 499 D 499 (1045)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-24 Score=211.70 Aligned_cols=291 Identities=10% Similarity=0.125 Sum_probs=205.8
Q ss_pred eCCCCcEEEEccceee---eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECC--CCe--eeeEecCCCCc
Q psy6127 194 SRSSRTITKCSENLVR---SYRVAKVFRENTDKINSLDYSSDGSLLISCSDD-DQIIIYDCE--QGT--SKNTINSKKYG 265 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~---~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d-g~i~iwd~~--~~~--~~~~~~~~~~~ 265 (515)
+...++.+.+|+ +. ..+.... ..|...+.+++|+|+|++|++++.+ +.|++|++. +++ .+..+..+. .
T Consensus 10 ~~~~~~~v~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 10 ASPESQQIHVWN--LNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEGGGTEEEEEE--ECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred eCCCCCeEEEEE--ECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 445677899997 42 2233333 3577889999999999999999887 999999997 554 334455444 7
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEEC---CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCC-CC
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSL---HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQ-PN 340 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~---~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~-~~ 340 (515)
+..++|+|+++.+++++ ..++.|.+||+ .+.+....+..+ ..+.+++|+|+++.+++++ .++.|.+||+.+ ++
T Consensus 86 ~~~~~~s~dg~~l~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGS-YNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CSEEEECTTSSEEEEEE-TTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CcEEEEcCCCCEEEEEe-cCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 89999999999887765 35899999999 444555555544 4588999999999888887 899999999987 65
Q ss_pred eEE----EE--ecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCC--ceeeec-CC--CCCcCeEEEEEcCCCC
Q psy6127 341 NVG----MI--QLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGP--FASFKC-PG--ERGCEWTGLKFSPDGK 408 (515)
Q Consensus 341 ~~~----~~--~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~--~~~~~~-~~--~~~~~i~~l~~sp~~~ 408 (515)
... .. .....+..++|+|+++++++++ .++.+.+|++....... ...... .. .....+..++|+|+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC
Confidence 432 22 2234577899999999776655 78999999996422111 112221 11 1134566899999999
Q ss_pred EEEEEE-CCCcEEEEECC--CC--ceeEEeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEE--ECCCCe--EEEEE
Q psy6127 409 LILVST-NGSIIRLFDAF--NG--NCVQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIW--NAERGY--KVCVL 478 (515)
Q Consensus 409 ~l~~~s-~dg~i~iwd~~--~~--~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iw--d~~~~~--~~~~~ 478 (515)
+++++. .++.|.+||+. ++ +.+..+... . .+..++|+|+|++|++++ .++.|.+| |..+++ .+..+
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~---~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPTE---T-QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEECS---S-SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecCC---C-ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 888555 78999999998 33 333333322 2 278899999999888887 67999999 555664 34444
Q ss_pred cCCCCCCeEEEEECCCCC
Q psy6127 479 DGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 479 ~~~h~~~V~~l~~sp~~~ 496 (515)
.. .....+++|.|+.+
T Consensus 320 ~~--g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 320 AV--GQGPMWVVVNAHEG 335 (343)
T ss_dssp EC--SSSCCEEEEEEEC-
T ss_pred cc--CCCCeeEEEEcccC
Confidence 43 24466788877543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-25 Score=237.34 Aligned_cols=298 Identities=10% Similarity=0.035 Sum_probs=213.6
Q ss_pred CCcEEEEccceeeeeEee-eeccccC-----------------CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE
Q psy6127 197 SRTITKCSENLVRSYRVA-KVFRENT-----------------DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT 258 (515)
Q Consensus 197 ~~~~i~~wd~~~~~~~~~-~~~~~h~-----------------~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~ 258 (515)
+++ | +|| ..+++.+ ..+..|. ..|.+++|||| +.++.+. ++.+++||+.+++...
T Consensus 43 ~~~-i-~~d--~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~- 115 (706)
T 2z3z_A 43 GDD-L-VFN--KANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY- 115 (706)
T ss_dssp TTE-E-EEE--C-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-
T ss_pred CCc-E-EEE--CCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-
Confidence 345 6 888 6677663 3344443 56999999999 6666654 5999999999887654
Q ss_pred ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC-----CeeeEEecCCCCC--------------eEEEEEcCCC
Q psy6127 259 INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD-----NKYVRYFPGHVRK--------------VSSLNLSPVD 319 (515)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-----~~~~~~~~~h~~~--------------v~~l~~~~~~ 319 (515)
+..+...+..++|+|+|+.++++. ++.|++||+.+ ++.......+... +.+++|+|||
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~~~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg 192 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAYVR---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG 192 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEEEE---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred ccCCcccccCCcCCCCCCEEEEEE---CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence 444567789999999999988753 89999999998 7776655444443 4899999999
Q ss_pred CEEEEEe---------------------------------CCCcEEEEEcCCCCeEEEEe---cCCCeeEEEECCCCCEE
Q psy6127 320 DSFISGS---------------------------------YDKTVRVWDLRQPNNVGMIQ---LSGNKPIAAYDPEGLAF 363 (515)
Q Consensus 320 ~~l~s~s---------------------------------~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~s~~~~~l 363 (515)
++|++++ .+..|++||+.+++...... +...+..++|+|||+.+
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 272 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENIL 272 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEE
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEE
Confidence 9999987 44679999999887655442 23447889999999999
Q ss_pred EEEECCC-----cEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcC--CCCEEEEEECCCcEEEEECC-CCceeEEe
Q psy6127 364 AIGVNSD-----SIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSP--DGKLILVSTNGSIIRLFDAF-NGNCVQSL 433 (515)
Q Consensus 364 ~~g~~dg-----~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp--~~~~l~~~s~dg~i~iwd~~-~~~~~~~~ 433 (515)
++++.++ .|.+||+.+++. ...+.. .......+..++|+| +|+++++++.++.+++|++. ++..+..+
T Consensus 273 ~~~~~~~~~~~~~v~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 273 YVAEVNRAQNECKVNAYDAETGRF--VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCE--EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC
T ss_pred EEEEeCCCCCeeEEEEEECCCCce--eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec
Confidence 9987765 899999887521 111111 111111235789999 99999999999999999876 56666666
Q ss_pred eccccCCCCCEE-EEEecCCCEEEEEeC-CC----cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC----
Q psy6127 434 SGVLNNNASPLE-ATFTPDSQFVASGST-DG----QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS---- 503 (515)
Q Consensus 434 ~~~~~~~~~i~~-~~~sp~g~~l~sgs~-dg----~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~---- 503 (515)
..+ ...+.. ++|+|+|+.|+.++. ++ .|+.||..+++ ...+. |...+.+++|+|||++++.+..
T Consensus 351 ~~~---~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~--~~~~~~~~~~spdg~~l~~~~~~~~~ 424 (706)
T 2z3z_A 351 TKG---EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT--PESGMHRTQLSPDGSAIIDIFQSPTV 424 (706)
T ss_dssp CCS---SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC--CSSSEEEEEECTTSSEEEEEEECSSC
T ss_pred CCC---CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc--CCCceEEEEECCCCCEEEEEecCCCC
Confidence 543 333665 799999998766554 44 67777887776 33343 6678999999999998876532
Q ss_pred --CEEEEcCCC
Q psy6127 504 --NMAFWIPTL 512 (515)
Q Consensus 504 --dv~iW~~~~ 512 (515)
.+.+|+++.
T Consensus 425 p~~i~l~d~~~ 435 (706)
T 2z3z_A 425 PRKVTVTNIGK 435 (706)
T ss_dssp SCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 288998764
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-24 Score=243.66 Aligned_cols=332 Identities=12% Similarity=0.041 Sum_probs=244.9
Q ss_pred CCcchhh-ccccccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccc-----------cC
Q psy6127 155 GSWDFEL-LHSLSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRE-----------NT 221 (515)
Q Consensus 155 ~~wd~~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~-----------h~ 221 (515)
.+|.+.. +.....+..+.. ...+++++++. +++. .+..+.+|+. ...+ +..+.+ |.
T Consensus 227 ~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~------la~~--~~~~i~~~d~--~~~~-l~~l~~~~~~~~~~~~~~~ 295 (1045)
T 1k32_A 227 QIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRR------ILFS--KGGSIYIFNP--DTEK-IEKIEIGDLESPEDRIISI 295 (1045)
T ss_dssp EEEEEETTSCSCEECCCCCSSCEEEEEESSSC------EEEE--ETTEEEEECT--TTCC-EEECCCCCCCBCCSEEEEC
T ss_pred EEEEEeCCCCcceEecCCCCcceeeEcCCCCE------EEEE--eCCEEEEecC--CceE-eeeeccCcccccccccccc
Confidence 8888654 445555555533 35566666654 4433 2567888873 2222 224444 45
Q ss_pred CcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCC-ceeEEEEecCCCeEEEEEeeCCCeEE-EEECCCCe
Q psy6127 222 DKINSLDYS-SDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY-GVDLIKFTHSKTTAIHASTKVDATLR-YLSLHDNK 298 (515)
Q Consensus 222 ~~I~~l~~s-pd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~s~~~d~~v~-vwd~~~~~ 298 (515)
..+.+++|+ |||++|++++ ++.+.+|+..+++.. .+..|.. .+..++|+ +++.+++++ .++.+. +||+.+++
T Consensus 296 ~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s--~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGT--REGDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEE--TTEEEEEEEETTTCC
T ss_pred cccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEE--CCCceEEEEECCCCC
Confidence 679999999 9999999988 789999999877654 4666777 89999999 988888776 477888 99998876
Q ss_pred eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCC-------
Q psy6127 299 YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSD------- 370 (515)
Q Consensus 299 ~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg------- 370 (515)
... +.+|...+..++|+|||+.|++++.++.|++||+.+++..... .+...+..++|+|||+++++++.++
T Consensus 371 ~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 371 AEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp EEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence 554 4478889999999999999999999999999999999887777 4555678999999999999887654
Q ss_pred ---cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce-------eEE--------
Q psy6127 371 ---SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC-------VQS-------- 432 (515)
Q Consensus 371 ---~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~-------~~~-------- 432 (515)
.|++||+.+++ ......+...+..++|+|+|++|++++.++....|+...... +..
T Consensus 450 ~~~~i~l~d~~~g~------~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK------IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSP 523 (1045)
T ss_dssp CEEEEEEEETTTTE------EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCC
T ss_pred CCCeEEEEECCCCc------EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCC
Confidence 89999998642 222334556678899999999999999888777776543221 000
Q ss_pred ------------------eec-------cccCCCCCEEEEEecCCCEEEE-------------EeCCCcEEEEECCCCeE
Q psy6127 433 ------------------LSG-------VLNNNASPLEATFTPDSQFVAS-------------GSTDGQVHIWNAERGYK 474 (515)
Q Consensus 433 ------------------~~~-------~~~~~~~i~~~~~sp~g~~l~s-------------gs~dg~I~iwd~~~~~~ 474 (515)
+.+ ...+...+..++++|||+++++ ......+++||+.+++.
T Consensus 524 ~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~ 603 (1045)
T 1k32_A 524 NPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 603 (1045)
T ss_dssp CGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE
T ss_pred CccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE
Confidence 000 0112234788999999987775 12345788999998875
Q ss_pred EEEEcCCCCCCeEEEEECCCCCEEEEeeCC-EEEEcCCCCC
Q psy6127 475 VCVLDGDHPSAVQSLQFNPKYHMLASACSN-MAFWIPTLSA 514 (515)
Q Consensus 475 ~~~~~~~h~~~V~~l~~sp~~~~las~~~d-v~iW~~~~~~ 514 (515)
.... ..+.+++|+|||+.|++++++ +++|++....
T Consensus 604 ~~l~-----~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 604 TEVK-----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp EEEE-----EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred EEee-----cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 4333 458899999999999988754 9999987653
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-25 Score=210.38 Aligned_cols=254 Identities=14% Similarity=0.149 Sum_probs=195.4
Q ss_pred EEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC-CeeeEEecCC-CCCeEEEEE
Q psy6127 238 SCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD-NKYVRYFPGH-VRKVSSLNL 315 (515)
Q Consensus 238 sgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-~~~~~~~~~h-~~~v~~l~~ 315 (515)
.++.|++|++||+.+++.. .+..|...+.+++|+|+++.+++++ ++.|++||+.+ ++.......| ...+.+++|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE---TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc---CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 3467899999999988766 4555788999999999999888764 88999999999 8877776666 377899999
Q ss_pred cCCCCEEEEEeC--CCcEEEE--EcCCCCeEEEEecCCCeeEEEECCCCCEEE-EEECCCcEEEEEeecCCCCCceeeec
Q psy6127 316 SPVDDSFISGSY--DKTVRVW--DLRQPNNVGMIQLSGNKPIAAYDPEGLAFA-IGVNSDSIKLYDVRSYDKGPFASFKC 390 (515)
Q Consensus 316 ~~~~~~l~s~s~--dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~g~~dg~i~i~d~~~~~~~~~~~~~~ 390 (515)
+|+++.|++++. ++...+| +..+++ ...+.....+..++|+|+++.++ ++..++.+++|+++.... ....
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~----~~~~ 167 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG----VETR 167 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC----CEEE
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC----cceE
Confidence 999999999983 3445555 555554 34444445588899999999887 677899999999865322 1222
Q ss_pred CCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECC-CCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-------
Q psy6127 391 PGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAF-NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD------- 461 (515)
Q Consensus 391 ~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d------- 461 (515)
...+...+.+++|+|+++++++++ .++.+++|++. .+.....+..+. ..+..++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 334566789999999999888776 58899999886 455555555433 347889999999999888765
Q ss_pred ----CcEEEEECCCCeE--EEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 462 ----GQVHIWNAERGYK--VCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 462 ----g~I~iwd~~~~~~--~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
+.|++||+.+++. +..+.+ |...+.+++|+|+++.|++++.+
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFG-GQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEE-STTTSCSCCBCTTSSEEEEEEEC
T ss_pred ccCceEEEEEecCCCCceeeeccCC-CCcccccceECCCCCEEEEEEec
Confidence 5699999988765 444445 78889999999999999887643
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-24 Score=210.57 Aligned_cols=272 Identities=14% Similarity=0.159 Sum_probs=193.1
Q ss_pred EEEEEeCCCeEEEEECC-CC--eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC--CCe--eeEEecCCC
Q psy6127 235 LLISCSDDDQIIIYDCE-QG--TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH--DNK--YVRYFPGHV 307 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~--~~~--~~~~~~~h~ 307 (515)
.+++++.|+.|++|++. ++ +....+ .+...+.+++|+|+++.+++++ ..++.|.+|++. +++ .+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGV-RPEFRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEE-TTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEee-cCCCeEEEEEecCCCCceeeccccccCC
Confidence 34444789999999995 33 223333 4567789999999999888776 234999999997 554 344555444
Q ss_pred CCeEEEEEcCCCCEEEEEeC-CCcEEEEEcC---CCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeec-CC
Q psy6127 308 RKVSSLNLSPVDDSFISGSY-DKTVRVWDLR---QPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRS-YD 381 (515)
Q Consensus 308 ~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~-~~ 381 (515)
.+..++|+|+++++++++. ++.|.+||+. ..+....+.....+..++|+|+++.+++++ .++.|.+||+.. +.
T Consensus 85 -~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 -SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp -CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred -CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 7899999999998877665 8899999994 344455555556688899999999888887 899999999986 32
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCC--Cce--eEEeeccc---cCCCCCEEEEEecCCC
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFN--GNC--VQSLSGVL---NNNASPLEATFTPDSQ 453 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~--~~~--~~~~~~~~---~~~~~i~~~~~sp~g~ 453 (515)
................+..++|+|+++++++++ .++.+.+|++.. ++. ........ .....+..++|+|+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC
Confidence 111110011223345678899999999887665 789999999953 432 22222111 1123466899999999
Q ss_pred EEEEE-eCCCcEEEEECC--C--CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC---CEEEEcCC
Q psy6127 454 FVASG-STDGQVHIWNAE--R--GYKVCVLDGDHPSAVQSLQFNPKYHMLASACS---NMAFWIPT 511 (515)
Q Consensus 454 ~l~sg-s~dg~I~iwd~~--~--~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~---dv~iW~~~ 511 (515)
+|+++ ..++.|.+||+. + .+.+..+.. +. .+.+++|+|+++++++++. .+.+|+++
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPT-ET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-SS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecC-CC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 88754 478999999998 3 345555554 33 3889999999998887762 39999665
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-24 Score=208.53 Aligned_cols=265 Identities=10% Similarity=0.049 Sum_probs=205.3
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCC--ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC-C----
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKY--GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG-H---- 306 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~-h---- 306 (515)
+++++++.++.|++||..+++.+..+..... .+..++|+|+++.++++. ..++.|.+||+.+++.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~-~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV-NKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE-TTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe-CCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 4789999999999999999998888764432 478999999998877765 4689999999999988876653 2
Q ss_pred CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEE
Q psy6127 307 VRKVSSLNLSPVDDSFISGS------------YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKL 374 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i 374 (515)
...+..++|+|+++.+++++ .++.|.+||+.+++....+.....+..++|+|++++++++ ++.+.+
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEE
Confidence 22677899999999988886 5799999999999888888776678889999999988887 689999
Q ss_pred EEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC------------------------cEEEEECCCCcee
Q psy6127 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS------------------------IIRLFDAFNGNCV 430 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg------------------------~i~iwd~~~~~~~ 430 (515)
||+.+++. ...+.. ..... .+.|+|++++++..+.++ .|.+||..+++..
T Consensus 159 ~d~~~~~~--~~~~~~-~~~~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 159 MDPEAGTL--VEDKPI-QSWEA---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EETTTTEE--EEEECS-TTTTT---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EECCCCcE--eeeeec-cccCC---CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 99987541 111111 11112 237899998776554332 4689999998875
Q ss_pred EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC--CEEEE
Q psy6127 431 QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS--NMAFW 508 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--dv~iW 508 (515)
.+.. ......+..++|+|+|++++++ ++.|++||+.+++.+..+.. ...+.+++|+|+++++++++. .+++|
T Consensus 233 -~~~~-~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 233 -MREV-RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp -EEEE-EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred -Eeec-CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 3322 1223347889999999999988 78999999999999888864 356789999999998887764 39999
Q ss_pred cCCCC
Q psy6127 509 IPTLS 513 (515)
Q Consensus 509 ~~~~~ 513 (515)
+++..
T Consensus 307 d~~~~ 311 (337)
T 1pby_B 307 DAETL 311 (337)
T ss_dssp ETTTC
T ss_pred ECcCC
Confidence 98754
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-23 Score=204.80 Aligned_cols=273 Identities=12% Similarity=0.130 Sum_probs=200.4
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCee-eeEecCCCCceeEEE
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD-DDQIIIYDCEQGTS-KNTINSKKYGVDLIK 270 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~-dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~ 270 (515)
.+...++.+.+|| ..+++....+..+...+ +++|+|||+++++++. ++.|.+||..+++. ...+..+..+..+++
T Consensus 14 v~~~~~~~v~~~d--~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (331)
T 3u4y_A 14 VVEQHLRRISFFS--TDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVD 90 (331)
T ss_dssp EEEGGGTEEEEEE--TTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEE
T ss_pred EEecCCCeEEEEe--CcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceE
Confidence 3556667899998 66777777777777777 9999999997777665 89999999999887 777777766666699
Q ss_pred EecCCCeEEEEEeeCCC--eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEE-EEeCCCc-EEEEEcCCCCeE----
Q psy6127 271 FTHSKTTAIHASTKVDA--TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI-SGSYDKT-VRVWDLRQPNNV---- 342 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~--~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~s~dg~-i~iwd~~~~~~~---- 342 (515)
|+|+++.++ ++...++ .|.+||+.+++.+..+..+ ....+++|+|+|++++ +...++. |.+|++.....+
T Consensus 91 ~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 91 ITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp ECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred ECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC
Confidence 999999888 4322223 9999999999988877644 4569999999998555 4456688 999999865433
Q ss_pred -EEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCC-ceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCc
Q psy6127 343 -GMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGP-FASFKCPGERGCEWTGLKFSPDGKLILVST-NGSI 418 (515)
Q Consensus 343 -~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~-~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~ 418 (515)
..+........++|+|+|++++++. .++.|.+||+.+++... ...+. ....+..++|+|+|+++++++ .++.
T Consensus 169 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 169 QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG----TNNLPGTIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE----CSSCCCCEEECTTSSEEEEECSSEEE
T ss_pred CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc----CCCCCceEEECCCCCEEEEEEcCCCE
Confidence 2233445578899999999765554 68899999998755310 12222 224556899999999887665 4778
Q ss_pred EEEEECCCCce--eEEeecc----ccCCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCCCeE
Q psy6127 419 IRLFDAFNGNC--VQSLSGV----LNNNASPLEATFTPDSQFVASGS-TDGQVHIWNAERGYK 474 (515)
Q Consensus 419 i~iwd~~~~~~--~~~~~~~----~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~~~~ 474 (515)
|.+||..+++. +..+... .........++|+|+|++|++++ .++.|.+||+.....
T Consensus 245 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 245 VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 99999999876 3333322 11111235689999999887665 457999999986553
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-25 Score=236.64 Aligned_cols=294 Identities=11% Similarity=0.111 Sum_probs=211.6
Q ss_pred CCCcEEEEccceeeeeEeeeeccccCC---cEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCeeeeEec---
Q psy6127 196 SSRTITKCSENLVRSYRVAKVFRENTD---KINSLDYSSDGSLLISCSDD---------DQIIIYDCEQGTSKNTIN--- 260 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~~~~~~~~~h~~---~I~~l~~spd~~~lasgs~d---------g~i~iwd~~~~~~~~~~~--- 260 (515)
+.++.+++|+ ..++++...+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++. ..+.
T Consensus 34 ~~dg~i~~~d--~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~ 110 (723)
T 1xfd_A 34 EQKGTVRLWN--VETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPE 110 (723)
T ss_dssp CSSSCEEEBC--GGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTT
T ss_pred eCCCCEEEEE--CCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCc
Confidence 4567899999 777888788888775 49999999999999999875 7888999998876 3333
Q ss_pred CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe------------------EEEEEcCCCCEE
Q psy6127 261 SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV------------------SSLNLSPVDDSF 322 (515)
Q Consensus 261 ~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v------------------~~l~~~~~~~~l 322 (515)
.+...+..++|+|+|+.+++++ ++.|++||+.+++.......+...+ .+++|+|||+.|
T Consensus 111 ~~~~~~~~~~~SPdG~~la~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~l 187 (723)
T 1xfd_A 111 VSNAKLQYAGWGPKGQQLIFIF---ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRL 187 (723)
T ss_dssp CCSCCCSBCCBCSSTTCEEEEE---TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEE
T ss_pred cccccccccEECCCCCEEEEEE---CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEE
Confidence 3444588999999999998886 5899999999988777666544433 789999999999
Q ss_pred EEEeCCC----------------------------------cEEEEEcCCCCeEEEEec-------CCCeeEEEECCCCC
Q psy6127 323 ISGSYDK----------------------------------TVRVWDLRQPNNVGMIQL-------SGNKPIAAYDPEGL 361 (515)
Q Consensus 323 ~s~s~dg----------------------------------~i~iwd~~~~~~~~~~~~-------~~~~~~~~~s~~~~ 361 (515)
++++.|+ .|++||+.+++....+.. ...+..++|+|||+
T Consensus 188 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 188 AYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe
Confidence 9987653 799999998886555532 23467899999999
Q ss_pred EEEEEECC----CcEEEEEeecCCCCCceeeecCCCCCcCe----EEEEEcCCCCEEEE--EECCC------cEEEEE-C
Q psy6127 362 AFAIGVNS----DSIKLYDVRSYDKGPFASFKCPGERGCEW----TGLKFSPDGKLILV--STNGS------IIRLFD-A 424 (515)
Q Consensus 362 ~l~~g~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i----~~l~~sp~~~~l~~--~s~dg------~i~iwd-~ 424 (515)
++++.... ..|++||+.+++... ... ..+...+ ..++|+|||+.|+. +..++ .|++|| .
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g~~~~--~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~ 343 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTGVCTK--KHE--DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQ 343 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTCCEEE--EEE--EECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSS
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCcceE--EEE--eccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEecc
Confidence 88776533 579999988754211 111 1111222 36899999997775 44666 577777 3
Q ss_pred CCCc--eeEEeeccccCCCCCEE-EEEecCCCEEEEEeCC---CcEEEEECCCC--eEEEEEcCC--CCCCeEEEEECCC
Q psy6127 425 FNGN--CVQSLSGVLNNNASPLE-ATFTPDSQFVASGSTD---GQVHIWNAERG--YKVCVLDGD--HPSAVQSLQFNPK 494 (515)
Q Consensus 425 ~~~~--~~~~~~~~~~~~~~i~~-~~~sp~g~~l~sgs~d---g~I~iwd~~~~--~~~~~~~~~--h~~~V~~l~~sp~ 494 (515)
..+. +...+... ...+.. ++|+|||+.|+..+.+ +.+++|++... .....+... |...+..++|+||
T Consensus 344 ~~~~~~~~~~l~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spd 420 (723)
T 1xfd_A 344 PNSSNDNIQSITSG---DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHS 420 (723)
T ss_dssp CCSSSCCCCBSCCS---SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTT
T ss_pred CCCCccceeEeecC---CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCC
Confidence 4443 13444321 122444 6999999999766554 78999998643 233334321 5667899999999
Q ss_pred CCEEEEee
Q psy6127 495 YHMLASAC 502 (515)
Q Consensus 495 ~~~las~~ 502 (515)
|++++...
T Consensus 421 g~~l~~~~ 428 (723)
T 1xfd_A 421 MDFFLLKC 428 (723)
T ss_dssp SSEEEEEC
T ss_pred CCEEEEEc
Confidence 99888753
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-24 Score=203.18 Aligned_cols=258 Identities=13% Similarity=0.141 Sum_probs=191.9
Q ss_pred eCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeeeeEecCC-CCceeEEEE
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQ-GTSKNTINSK-KYGVDLIKF 271 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~-~~~v~~~~~ 271 (515)
+.+.+..+.+|+ ....+.. .+..|...|.+++|+|||++|++++ ++.|++||+.+ ++.......+ ...+.+++|
T Consensus 17 ~~~~~~~i~~~d--~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 17 GGSMRSSIEIFN--IRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp -CCCCEEEEEEE--TTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred CCCcceeEEEEe--CCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 456778899998 5555544 4567899999999999999999987 78999999998 8777666555 367899999
Q ss_pred ecCCCeEEEEEeeCC--CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEc--CCCCeEEEEe
Q psy6127 272 THSKTTAIHASTKVD--ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI-SGSYDKTVRVWDL--RQPNNVGMIQ 346 (515)
Q Consensus 272 ~~~~~~l~~~s~~~d--~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~s~dg~i~iwd~--~~~~~~~~~~ 346 (515)
+|+++.+++++...+ ..|..++..+++ ...+..+ ..+..++|+|+++.|+ +++.|+.+++|++ .+++......
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc
Confidence 999999888763333 455555555554 3444433 3489999999999777 7888999999985 4455444445
Q ss_pred cCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC---------
Q psy6127 347 LSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG--------- 416 (515)
Q Consensus 347 ~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d--------- 416 (515)
....+..++|+|+++.+++++ .++.+++|++..... .......+...+..++|+|+|++|++++.+
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS----SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS----CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCC----CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 556688999999999888776 589999999974321 222334455678899999999999988765
Q ss_pred --CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 417 --SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 417 --g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
+.|++||+.+++...... ...+...+..++|+|+|++|++++.+.
T Consensus 247 ~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNVETLFD-LFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEEETTSCSCEEEEE-EEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CceEEEEEecCCCCceeeec-cCCCCcccccceECCCCCEEEEEEecc
Confidence 569999998886543332 112334488899999999998887653
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-25 Score=236.44 Aligned_cols=286 Identities=13% Similarity=0.120 Sum_probs=207.6
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCC---ceeEEEEecCCCeEEEEEee-------CCCeEEEE
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY---GVDLIKFTHSKTTAIHASTK-------VDATLRYL 292 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~s~~-------~d~~v~vw 292 (515)
.+.+++|+|||+++++ +.||+|++||+.+++....+..|.. .+..++|+|||+.+++++.. .++.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678899999998876 7899999999999988888877765 49999999999999888631 13789999
Q ss_pred ECCCCeee--EEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec-CCC------------------e
Q psy6127 293 SLHDNKYV--RYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-SGN------------------K 351 (515)
Q Consensus 293 d~~~~~~~--~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~------------------~ 351 (515)
|+.+++.. ....+|...+..++|+|||+.|+.++. +.|++||+.+++....... ... +
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 99988762 222345556899999999999999886 7999999999887766543 222 2
Q ss_pred eEEEECCCCCEEEEEECCC----------------------------------cEEEEEeecCCCCCceeeec---CCCC
Q psy6127 352 PIAAYDPEGLAFAIGVNSD----------------------------------SIKLYDVRSYDKGPFASFKC---PGER 394 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~dg----------------------------------~i~i~d~~~~~~~~~~~~~~---~~~~ 394 (515)
..++|+|||+.|++++.++ .|++||+.+++.. ..+.. ...+
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~ 253 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD--LEMMPPDDPRMR 253 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC--EECCCCCCGGGS
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee--EEeeCCccCCCc
Confidence 6899999999999987543 7889998775421 11111 0112
Q ss_pred CcCeEEEEEcCCCCEEEEEEC----CCcEEEEECCCCceeEEeeccccCC-CC-CEEEEEecCCCEEEE--EeCCC----
Q psy6127 395 GCEWTGLKFSPDGKLILVSTN----GSIIRLFDAFNGNCVQSLSGVLNNN-AS-PLEATFTPDSQFVAS--GSTDG---- 462 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~----dg~i~iwd~~~~~~~~~~~~~~~~~-~~-i~~~~~sp~g~~l~s--gs~dg---- 462 (515)
...+..++|+|||+++++.+. +..|++||+.++++...+..+.... .. ...++|+|||+.|+. +..++
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 333 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGK 333 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSC
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcc
Confidence 567889999999998877653 3579999999998776654332111 10 137899999997765 44666
Q ss_pred --cEEEEE-CCCCe--EEEEEcCCCCCCeEE-EEECCCCCEEEEee-----CCEEEEcCCCC
Q psy6127 463 --QVHIWN-AERGY--KVCVLDGDHPSAVQS-LQFNPKYHMLASAC-----SNMAFWIPTLS 513 (515)
Q Consensus 463 --~I~iwd-~~~~~--~~~~~~~~h~~~V~~-l~~sp~~~~las~~-----~dv~iW~~~~~ 513 (515)
.|++|| ..+++ +...+.. +...+.. ++|+|||+.|+..+ +..++|+++..
T Consensus 334 ~~~l~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 334 FYHITVSSSQPNSSNDNIQSITS-GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEEEEEECSSCCSSSCCCCBSCC-SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred eeEEEEEeccCCCCccceeEeec-CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 577777 34444 1444443 3344554 69999999987654 34889998653
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-24 Score=207.41 Aligned_cols=273 Identities=11% Similarity=0.056 Sum_probs=209.8
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccC-C-cEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeeeeEecCCC-----C
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENT-D-KINSLDYSSDGSLLI-SCSDDDQIIIYDCEQGTSKNTINSKK-----Y 264 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~-~-~I~~l~~spd~~~la-sgs~dg~i~iwd~~~~~~~~~~~~~~-----~ 264 (515)
+++..++.+.+|| ..+++....+.... . .+.+++|+|+|++++ +++.++.|.+||+.+++.+..+.... .
T Consensus 5 v~~~~~~~v~~~d--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 5 LAPARPDKLVVID--TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEETTTEEEEEE--TTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEcCCCCeEEEEE--CCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 3566678899998 66677776665332 2 488999999998764 55567899999999998887765422 2
Q ss_pred ceeEEEEecCCCeEEEEEee----------CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy6127 265 GVDLIKFTHSKTTAIHASTK----------VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~----------~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw 334 (515)
.+..++|+|+++.++++... .++.|.+||+.+++.+..+.. ...+.+++|+|++++++++ ++.|.+|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 57789999999988877522 379999999999988877764 4567889999999988887 6899999
Q ss_pred EcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCC------------------------cEEEEEeecCCCCCceeeec
Q psy6127 335 DLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD------------------------SIKLYDVRSYDKGPFASFKC 390 (515)
Q Consensus 335 d~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg------------------------~i~i~d~~~~~~~~~~~~~~ 390 (515)
|+.+++....+........+.|+|++..++..+..+ .|.+||+.+++.. ...
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~- 235 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MRE- 235 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEE-
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---Eee-
Confidence 999998887775543223347899988766544332 4678888775421 111
Q ss_pred CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 391 PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 391 ~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
...+...+.+++|+|++++++++ ++.|++||+.+++.+..+... ..+.+++|+|+|++|++++.++.|++||+.
T Consensus 236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP----HSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS----SCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC----CceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 12334567789999999999988 689999999999887777643 237899999999999999999999999999
Q ss_pred CCeEEEEEcC
Q psy6127 471 RGYKVCVLDG 480 (515)
Q Consensus 471 ~~~~~~~~~~ 480 (515)
+++.+..+..
T Consensus 310 ~~~~~~~~~~ 319 (337)
T 1pby_B 310 TLEKKGQVDL 319 (337)
T ss_dssp TCCEEEEEEC
T ss_pred CCcEEEEEEc
Confidence 9999888865
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-22 Score=197.94 Aligned_cols=288 Identities=11% Similarity=0.111 Sum_probs=197.1
Q ss_pred CCCcEEEEccceeeee--EeeeeccccCCcEEEEEEcCCCCEEEEEeCC----CeEEEEECCC--Cee--eeEecCCCCc
Q psy6127 196 SSRTITKCSENLVRSY--RVAKVFRENTDKINSLDYSSDGSLLISCSDD----DQIIIYDCEQ--GTS--KNTINSKKYG 265 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~--~~~~~~~~h~~~I~~l~~spd~~~lasgs~d----g~i~iwd~~~--~~~--~~~~~~~~~~ 265 (515)
+.+.-+.+|.-...++ +.+..+ |...+..++|+|||++|++++.+ +.|.+|++.. ++. +.....+...
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 3445566665212223 333333 77888899999999999999986 7999998865 433 3344445556
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe------cC--------CCCCeEEEEEcCCCCEEEEEe-CCCc
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF------PG--------HVRKVSSLNLSPVDDSFISGS-YDKT 330 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~------~~--------h~~~v~~l~~~~~~~~l~s~s-~dg~ 330 (515)
...+++ +++.++++. ..++.+.+|++.....+... .+ +...+.+++|+|+|+++++++ .++.
T Consensus 102 p~~~~~--dg~~l~~~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 102 PCYLTT--NGKNIVTAN-YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp EEEEEE--CSSEEEEEE-TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred cEEEEE--CCCEEEEEE-CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 777777 777777665 46899999999754332211 11 233468899999999766655 4889
Q ss_pred EEEEEcCCCCe--------------EEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCC
Q psy6127 331 VRVWDLRQPNN--------------VGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 331 i~iwd~~~~~~--------------~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
|.+|++..... .........+..++|+|+|++++++. .++.|.+|++.++.............+.
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC
Confidence 99999875441 11223344578899999999888777 6899999999864322222233333334
Q ss_pred cCeEEEEEcCCCCEEEEEECC--CcEEEEECC--CCc--eeEEeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEE-
Q psy6127 396 CEWTGLKFSPDGKLILVSTNG--SIIRLFDAF--NGN--CVQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIW- 467 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~d--g~i~iwd~~--~~~--~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iw- 467 (515)
.....++|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+|+|++|++++ .++.|.+|
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~----g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT----GIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC----SSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC----CCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 456799999999999877765 899999985 444 2333332 23478999999999988887 67889996
Q ss_pred -ECCCCeEEEEEcCCCCCCeEEEEEC
Q psy6127 468 -NAERGYKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 468 -d~~~~~~~~~~~~~h~~~V~~l~~s 492 (515)
|..+++........+...+.|++|.
T Consensus 335 ~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 335 RDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EECCCCcEeecceeeeCCCCeEEEEc
Confidence 5557776654433245678899886
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=220.62 Aligned_cols=261 Identities=13% Similarity=0.065 Sum_probs=191.2
Q ss_pred cCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeeeeEecCCC-CceeEEEEecCCCeEEEEEee--CCCeEEEEECC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSD-DDQIIIYDCEQGTSKNTINSKK-YGVDLIKFTHSKTTAIHASTK--VDATLRYLSLH 295 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~~--~d~~v~vwd~~ 295 (515)
+..+|++++|+|||++||+++. ||+++||++.+++.. .+..+. ..+..++|+|+ + +++.+.. .+....+|.+.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-e-EEEEeccCCCCcceEEEEEe
Confidence 3568999999999999999887 999999999766554 455454 68999999998 4 4443321 24545555443
Q ss_pred C---CeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC--
Q psy6127 296 D---NKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS-- 369 (515)
Q Consensus 296 ~---~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-- 369 (515)
. +... .+..+. .+...+|+|+++ .+++.+.++.+.+||+.+++......... ..++|+|||+++++++.+
T Consensus 97 ~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEET
T ss_pred ccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCC
Confidence 2 2222 333222 344668888886 33344444555699999987766655444 889999999999988776
Q ss_pred --CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC--cEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 370 --DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS--IIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 370 --g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
+.|++||+.+++. . ....+...+..++|||||++|+++..++ .|++||+.+++.. .+..+. ..+..
T Consensus 173 ~~~~i~~~d~~~g~~-----~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~---~~~~~ 242 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGL-----R-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS---KDFSS 242 (582)
T ss_dssp TEEEEEEEETTTCCC-----E-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC---SHHHH
T ss_pred CCeEEEEEcCCCCCc-----e-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC---cChhh
Confidence 7899999887542 1 2234556788999999999999888888 8999999998876 544432 22444
Q ss_pred EE--------EecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 446 AT--------FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 446 ~~--------~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
++ |+|||.++++++.||.+++|++ |+... . +.+.|.+++|+ +++++++++.+
T Consensus 243 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~-~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 243 YRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---A-PQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp HCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---C-CSSEEEEEEEE-TTEEEEEEEET
T ss_pred hhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---c-CCCceEEEEec-CCEEEEEEcCC
Confidence 55 9999999999999999999999 76655 2 45779999999 99998887754
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-22 Score=196.33 Aligned_cols=254 Identities=13% Similarity=0.150 Sum_probs=177.7
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCe--eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSD---DDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~---dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
..+...+..++|+|||+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|+++.+++++ ..++.+.+|
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~-~~~~~v~v~ 113 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSAN-YHKGTAEVM 113 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEE-TTTTEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEe-CCCCEEEEE
Confidence 44567788899999999 555554 6899999998765 3444455677889999999999888776 368999999
Q ss_pred ECCC-C--eeeEEecC---------CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCCeEEE--E--ecCCCeeEEE
Q psy6127 293 SLHD-N--KYVRYFPG---------HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR-QPNNVGM--I--QLSGNKPIAA 355 (515)
Q Consensus 293 d~~~-~--~~~~~~~~---------h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~-~~~~~~~--~--~~~~~~~~~~ 355 (515)
++.. + +.+..+.. +...+.+++|+|+|+.+++...++.|.+||+. +++.... + .....+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 2 33333321 12358899999999966666678899999998 4543322 2 2233577899
Q ss_pred ECCCCCEEEE-EECCCcEEEEEeecCCCCC--ceeeecCCC---CCcCeEEEEEcCCCCEEE-EEECCCcEEEEECCCC-
Q psy6127 356 YDPEGLAFAI-GVNSDSIKLYDVRSYDKGP--FASFKCPGE---RGCEWTGLKFSPDGKLIL-VSTNGSIIRLFDAFNG- 427 (515)
Q Consensus 356 ~s~~~~~l~~-g~~dg~i~i~d~~~~~~~~--~~~~~~~~~---~~~~i~~l~~sp~~~~l~-~~s~dg~i~iwd~~~~- 427 (515)
|+|+|+++++ +..++.+.+|++....... ......... ....+..++|+|+|++|+ +...++.|.+|++...
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence 9999997666 4568899999998522111 111111111 114577899999999885 4556899999998733
Q ss_pred --ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-CcEEEE--ECCCCeEEE
Q psy6127 428 --NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-GQVHIW--NAERGYKVC 476 (515)
Q Consensus 428 --~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-g~I~iw--d~~~~~~~~ 476 (515)
+.+..+.. +...+..++|+|||++|++++.+ +.|.+| |..+|+...
T Consensus 274 ~~~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 274 HLTLIQQIST---EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CEEEEEEEEC---SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred cEEEeEEEec---CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 33333333 23347899999999998888754 899999 556676553
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-22 Score=195.89 Aligned_cols=251 Identities=10% Similarity=0.069 Sum_probs=199.1
Q ss_pred CcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeeeeEecCCCCc---------ee
Q psy6127 198 RTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISC-SDDDQIIIYDCEQGTSKNTINSKKYG---------VD 267 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasg-s~dg~i~iwd~~~~~~~~~~~~~~~~---------v~ 267 (515)
++.+.+|| ..+++....+... ..+..++|+|+|++++.+ ..++.|.+||..+++.+..+..+... +.
T Consensus 68 ~~~v~~~d--~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (353)
T 3vgz_A 68 GGVVYRLD--PVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR 144 (353)
T ss_dssp SEEEEEEC--TTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE
T ss_pred CccEEEEc--CCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc
Confidence 67789998 6667776666543 447889999999966555 55799999999999988888765422 78
Q ss_pred EEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec
Q psy6127 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL 347 (515)
Q Consensus 268 ~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 347 (515)
+++|+|+++.++++....++.|.+||..+++.+..+..+...+.+++|+|+++.+++++.++.|.+||..+++....+..
T Consensus 145 ~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 145 ELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp EEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc
Confidence 89999999988887745689999999999999988876667789999999999999999999999999999998877754
Q ss_pred -----CCCeeEEEECCCCCEEEEEEC-CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEE
Q psy6127 348 -----SGNKPIAAYDPEGLAFAIGVN-SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIR 420 (515)
Q Consensus 348 -----~~~~~~~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~ 420 (515)
...+..++|+|+++.+++++. ++.|.+||..+++. ...... .. + ..++|+|++++++++. .++.|.
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~--~~--~-~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI--LAKVAA--PE--S-LAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE--EEEEEC--SS--C-CCEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEEc--CC--C-ceEEECCCCCEEEEEECCCCeEE
Confidence 233567999999998777765 48999999977542 122221 11 1 3699999999777666 689999
Q ss_pred EEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 421 LFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
+||..+++.+..+.... .+..++|+|+|++|+++..++
T Consensus 298 ~~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 298 VIDAKSYKVVKTFDTPT----HPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEETTTTEEEEEEECCS----EEEEEEECTTSCEEEEEEECC
T ss_pred EEECCCCeEEEEEecCC----CCCeEEEcCCCCEEEEEEccc
Confidence 99999999888776432 378999999999887776654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-23 Score=222.95 Aligned_cols=274 Identities=17% Similarity=0.204 Sum_probs=199.2
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-eEecCCC-----------------CceeEEEEecCCCeEEEEEeeC
Q psy6127 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-NTINSKK-----------------YGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
+..+.|. |+.+++++.|+ | +||+.+++.+ ..+..+. ..+.+++|+|+ ..++++.
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~--- 99 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT--- 99 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE---
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE---
Confidence 4446777 66777788888 8 9999998873 3333322 46999999999 6666654
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-----CCeEEEEecCCC----------
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ-----PNNVGMIQLSGN---------- 350 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~-----~~~~~~~~~~~~---------- 350 (515)
++.+++||+.+++.... ..+...+.+++|+|||+.|+++ .|+.|++||+.+ ++..........
T Consensus 100 ~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred CCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 79999999998876554 4467778999999999999985 689999999998 776654433222
Q ss_pred -----eeEEEECCCCCEEEEEE---------------------------------CCCcEEEEEeecCCCCCceeeecCC
Q psy6127 351 -----KPIAAYDPEGLAFAIGV---------------------------------NSDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 351 -----~~~~~~s~~~~~l~~g~---------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
+..+.|+|||++|++++ .+..|.+||+.+++. .......
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~---~~~~~~~ 254 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT---VYLQTGE 254 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE---EECCCCS
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce---EeeccCC
Confidence 47899999999999987 446799999976531 1111122
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCC-----cEEEEECCCCceeEEeecccc--CCCCCEEEEEec--CCCEEEEEeCCCc
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGS-----IIRLFDAFNGNCVQSLSGVLN--NNASPLEATFTP--DSQFVASGSTDGQ 463 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg-----~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp--~g~~l~sgs~dg~ 463 (515)
.+...+..++|+|||++|++++.++ .|++||+.+++....+..... ....+..++|+| ||+++++++.||.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 4566789999999999999887665 899999999844444332211 111246789999 9999999999999
Q ss_pred EEEEECC-CCeEEEEEcCCCCCCeEE-EEECCCCCEEEEeeC-C----EEEEcCC
Q psy6127 464 VHIWNAE-RGYKVCVLDGDHPSAVQS-LQFNPKYHMLASACS-N----MAFWIPT 511 (515)
Q Consensus 464 I~iwd~~-~~~~~~~~~~~h~~~V~~-l~~sp~~~~las~~~-d----v~iW~~~ 511 (515)
+++|+++ ++..+..+.. |...+.+ ++|+|+++.|+.++. + .+||.++
T Consensus 335 ~~l~~~~~~~~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CEEEEEETTSCEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred cEEEEEECCCCEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 9999876 6777777776 7777877 899999988766542 2 4666554
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.7e-22 Score=193.96 Aligned_cols=268 Identities=12% Similarity=0.124 Sum_probs=183.7
Q ss_pred CCeEEEEECC--CCeeee-EecCCCCceeEEEEecCCCeEEEEEe-eCCCeEEEEECCCCe--eeEEecCCCCCeEEEEE
Q psy6127 242 DDQIIIYDCE--QGTSKN-TINSKKYGVDLIKFTHSKTTAIHAST-KVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNL 315 (515)
Q Consensus 242 dg~i~iwd~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~-~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~l~~ 315 (515)
++.|.+|+++ +++... ....+...+..++|+|+++ +++++. +.++.|.+||+.+++ .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 4567776654 555433 2334456678899999998 665553 236899999998776 44454557778899999
Q ss_pred cCCCCEEEEEe-CCCcEEEEEcCC-CCe--EEEEecC----------CCeeEEEECCCCCEEEEEECCCcEEEEEeecCC
Q psy6127 316 SPVDDSFISGS-YDKTVRVWDLRQ-PNN--VGMIQLS----------GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 316 ~~~~~~l~s~s-~dg~i~iwd~~~-~~~--~~~~~~~----------~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
+|+|++|++++ .++.|.+||+.. +.. +..+... ..+..++|+|+|+.+++...++.|.+|++....
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 99999888888 689999999963 332 2333222 126679999999966666678899999998321
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCCEEEEE-ECCCcEEEEECCC--Cce--eEEeecccc---CCCCCEEEEEecCCC
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVS-TNGSIIRLFDAFN--GNC--VQSLSGVLN---NNASPLEATFTPDSQ 453 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~-s~dg~i~iwd~~~--~~~--~~~~~~~~~---~~~~i~~~~~sp~g~ 453 (515)
. ..............+..++|+|+|++++++ ..++.+.+|++.. ++. ...+..... ....+..++|+|||+
T Consensus 174 ~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 174 Q-LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp C-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred c-EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 1 111111112233356789999999977765 4678999999874 543 222222111 113378899999999
Q ss_pred EEE-EEeCCCcEEEEECC---CCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC---CEEEEcCCC
Q psy6127 454 FVA-SGSTDGQVHIWNAE---RGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS---NMAFWIPTL 512 (515)
Q Consensus 454 ~l~-sgs~dg~I~iwd~~---~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~---dv~iW~~~~ 512 (515)
+|+ +...++.|.+|++. ..+.+..+.. +...+.+++|+|||++|++++. .+.+|+++.
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQQIST-EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEEEEEC-SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeEEEec-CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 875 45568999999997 2355666655 5667899999999998888763 399996653
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-23 Score=202.51 Aligned_cols=296 Identities=11% Similarity=0.042 Sum_probs=209.0
Q ss_pred eeeEeeeeccccCCcEEE-----EEEcCCCCEEEEEeC-CC--eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEE
Q psy6127 209 RSYRVAKVFRENTDKINS-----LDYSSDGSLLISCSD-DD--QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIH 280 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~-----l~~spd~~~lasgs~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 280 (515)
.++.....+..|...... .+|+|||++|+.++. ++ .|.+||+.+++.......+...+....|+|+++.+++
T Consensus 18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 18 STGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred CCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEE
Confidence 335556667777776666 889999999999987 66 4888999988887776666666667889999999888
Q ss_pred EEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEE--EcCCCCEEEEE----------------------eCCCcEEEEEc
Q psy6127 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLN--LSPVDDSFISG----------------------SYDKTVRVWDL 336 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~--~~~~~~~l~s~----------------------s~dg~i~iwd~ 336 (515)
++ .++.+++||+.+++....+..+...+.... ++|+++.++.. ..+..|.+||+
T Consensus 98 ~~--~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 175 (388)
T 3pe7_A 98 VK--DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL 175 (388)
T ss_dssp EE--TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET
T ss_pred Ee--CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEEC
Confidence 76 578999999999988777766666564444 48999988743 24467999999
Q ss_pred CCCCeEEEEecCCCeeEEEECC-CCCEEEEEECCC------cEEEEEeecCCCCCceeeecCCCCC-cCeEEEEEcCCCC
Q psy6127 337 RQPNNVGMIQLSGNKPIAAYDP-EGLAFAIGVNSD------SIKLYDVRSYDKGPFASFKCPGERG-CEWTGLKFSPDGK 408 (515)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~-~~i~~l~~sp~~~ 408 (515)
.+++..........+..+.|+| +|+.++....++ .|.++|..... ......... ..+..++|+|||+
T Consensus 176 ~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 176 KTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-----MRKVKTHAEGESCTHEFWVPDGS 250 (388)
T ss_dssp TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-----CEESCCCCTTEEEEEEEECTTSS
T ss_pred CCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-----eEEeeeCCCCcccccceECCCCC
Confidence 9998777666666688999999 999998877643 66777765432 111112222 3577889999999
Q ss_pred EEEEEEC-CC----cEEEEECCCCceeEE--eeccccCCCCCEEEEEecCCCEEEEE---------eCCCcEEEEECCCC
Q psy6127 409 LILVSTN-GS----IIRLFDAFNGNCVQS--LSGVLNNNASPLEATFTPDSQFVASG---------STDGQVHIWNAERG 472 (515)
Q Consensus 409 ~l~~~s~-dg----~i~iwd~~~~~~~~~--~~~~~~~~~~i~~~~~sp~g~~l~sg---------s~dg~I~iwd~~~~ 472 (515)
.|+..+. ++ .|++||+.+++.... +.............+|+|||+.|+.. ..+..|++||+.++
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 251 ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp CEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT
T ss_pred EEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 8765443 22 399999998875332 22210000001223799999988754 44668999999988
Q ss_pred eEEEEEcCCCCC-----------CeEEEEECCCCCEEEEee---CCEEEEcCCCC
Q psy6127 473 YKVCVLDGDHPS-----------AVQSLQFNPKYHMLASAC---SNMAFWIPTLS 513 (515)
Q Consensus 473 ~~~~~~~~~h~~-----------~V~~l~~sp~~~~las~~---~dv~iW~~~~~ 513 (515)
+... +.. +.. .+.+++|+|||+.|+.++ +...||.++..
T Consensus 331 ~~~~-l~~-~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 331 TQHR-VAR-HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEEE-EEE-CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred ceEE-ecc-ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 7644 333 444 578899999999888766 33677776654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-22 Score=194.23 Aligned_cols=243 Identities=12% Similarity=0.057 Sum_probs=189.7
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCC-CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec
Q psy6127 226 SLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKK-YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 226 ~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~ 304 (515)
.++++++++++++++.+++|++||..+++.+..+..+. ..+..++|+|+++.++++. ..++.|.+||+.+++.+..+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~-~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN-NHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE-TTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe-CCCCcEEEEeCCCCcEEEEEE
Confidence 45688899999999999999999999999888887553 2578999999998777665 468999999999998887765
Q ss_pred CC------CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEEcCCCC---eEEEEecCCCeeEEEECCCCCEE
Q psy6127 305 GH------VRKVSSLNLSPVDDSFISGSYD------------KTVRVWDLRQPN---NVGMIQLSGNKPIAAYDPEGLAF 363 (515)
Q Consensus 305 ~h------~~~v~~l~~~~~~~~l~s~s~d------------g~i~iwd~~~~~---~~~~~~~~~~~~~~~~s~~~~~l 363 (515)
.+ ...+..++|+|+|+++++++.+ +.|.+||+.+++ .+........+.+++|+|+|+ +
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-L 161 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-E
Confidence 32 2337889999999999998865 899999998843 344555555688899999999 5
Q ss_pred EEEECCCcEEEEEeecCCCCCceeeecCC---------------------------------------------------
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASFKCPG--------------------------------------------------- 392 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~~~~~--------------------------------------------------- 392 (515)
+++ ++.|.+||..+++.. ..+....
T Consensus 162 ~~~--~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 162 YVA--GPDIYKMDVKTGKYT--VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp EEE--SSSEEEECTTTCCEE--EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EEc--cCcEEEEeCCCCcee--ccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 554 345999998765411 1111000
Q ss_pred --------------CCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 393 --------------ERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 393 --------------~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
.....+..++|+| ++++++++ ++.|.+||+.+++.+..+.... .+..++|+|+|++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH----TYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS----CCCEEEECSSSSCEEE
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC----CccceEECCCCCEEEE
Confidence 0012455778889 99999888 8899999999998877776322 2678999999998888
Q ss_pred EeCCCcEEEEECCCCeEEEEEcC
Q psy6127 458 GSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 458 gs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
++.++.|++||..+++.+..+..
T Consensus 312 ~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 312 GGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp ESBSSEEEEEETTTTEEEEEEEC
T ss_pred ecCCCeEEEEeccccceeeeeec
Confidence 88899999999999999988865
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-20 Score=184.79 Aligned_cols=279 Identities=13% Similarity=0.167 Sum_probs=189.5
Q ss_pred cCCCCEEEEEe----CCCeEEEEEC--CCCeeeeEecCCCCceeEEEEecCCCeEEEEEee--CCCeEEEEECCC--Ce-
Q psy6127 230 SSDGSLLISCS----DDDQIIIYDC--EQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK--VDATLRYLSLHD--NK- 298 (515)
Q Consensus 230 spd~~~lasgs----~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~--~d~~v~vwd~~~--~~- 298 (515)
.+...+++.|+ .++.|.+|++ .+++.......+...+..++|+|+++.+++++.. .++.|.+|++.. ++
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 33445566664 3568899866 4555433222266778889999999988887732 248999998865 43
Q ss_pred -eeEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEE----EEecC-----------CCeeEEEECCCCC
Q psy6127 299 -YVRYFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVG----MIQLS-----------GNKPIAAYDPEGL 361 (515)
Q Consensus 299 -~~~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~----~~~~~-----------~~~~~~~~s~~~~ 361 (515)
.+.....+......+++ +++++++++ .++.|.+|++.....+. ..... ..+..++|+|+|+
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 33444445667778888 788777776 57899999997543321 11111 1246799999999
Q ss_pred EEEEEE-CCCcEEEEEeecCCC----C-Ccee---eecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCce--
Q psy6127 362 AFAIGV-NSDSIKLYDVRSYDK----G-PFAS---FKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNC-- 429 (515)
Q Consensus 362 ~l~~g~-~dg~i~i~d~~~~~~----~-~~~~---~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~-- 429 (515)
+++++. .++.+.+|++..... . .... .............++|+|+|+++++++ .++.|.+|++.+++.
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDE 247 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEE
Confidence 776655 478999999986442 1 1110 111223344567999999999888877 689999999987754
Q ss_pred eEEeeccccCCCCCEEEEEecCCCEEEEEeCC--CcEEEEECC--CCe--EEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTD--GQVHIWNAE--RGY--KVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 430 ~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d--g~I~iwd~~--~~~--~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
+..+.....+...+..++|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++.
T Consensus 248 ~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 248 IQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEET
T ss_pred eEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEEC
Confidence 33333333333346799999999998776654 899999985 455 4444442 456789999999998888762
Q ss_pred ---CEEEEcCCC
Q psy6127 504 ---NMAFWIPTL 512 (515)
Q Consensus 504 ---dv~iW~~~~ 512 (515)
.+.+|.++.
T Consensus 326 ~~~~v~v~~~d~ 337 (361)
T 3scy_A 326 DTNVIQIFERDQ 337 (361)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCCEEEEEEEC
Confidence 389977653
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-20 Score=185.57 Aligned_cols=286 Identities=12% Similarity=0.099 Sum_probs=211.1
Q ss_pred CcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCeeeeEecCC-----
Q psy6127 198 RTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD----------DDQIIIYDCEQGTSKNTINSK----- 262 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~----------dg~i~iwd~~~~~~~~~~~~~----- 262 (515)
+..+.+|| ..+++.+.++..+..+ .++|+|||+++++++. +++|.+||..+++.+.++...
T Consensus 30 d~~v~v~D--~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 30 ESRVHVYD--YTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GCEEEEEE--TTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred cCeEEEEE--CCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 55688888 5566777777777666 8999999999999863 678999999999888877643
Q ss_pred -CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE-ecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCC-
Q psy6127 263 -KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY-FPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQ- 338 (515)
Q Consensus 263 -~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~-~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~- 338 (515)
......++++|++++++++....+++|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|+...
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 2456789999999999988743478999999999998887 542 2 23346677876 5788899999999999875
Q ss_pred CCeEEEEe------cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCC-------CCCcCeEEEEEcC
Q psy6127 339 PNNVGMIQ------LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG-------ERGCEWTGLKFSP 405 (515)
Q Consensus 339 ~~~~~~~~------~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~-------~~~~~i~~l~~sp 405 (515)
++...... .......+.++|++..++..+.++.+.++|+............... ........++|+|
T Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred CcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 55442221 1111222344567778887888999999998653321111111100 0001111378999
Q ss_pred CCCEEEEEEC-----------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC--
Q psy6127 406 DGKLILVSTN-----------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG-- 472 (515)
Q Consensus 406 ~~~~l~~~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~-- 472 (515)
+++.++++.. .+.|.+||+.+++.+..+..+. +..++|+|||++|++++. +.|.+||..++
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l 337 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP 337 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-----CCEEEEETTTTEEEEECS-SCEEEEECSSSSC
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc
Confidence 9988887653 3479999999999998887643 789999999999998886 99999999999
Q ss_pred eEEEEEcCCCCCCeEEEEECCCCC
Q psy6127 473 YKVCVLDGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 473 ~~~~~~~~~h~~~V~~l~~sp~~~ 496 (515)
+.+..+.. +......++++|+|.
T Consensus 338 ~~~~~i~~-~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 338 KLLRTIEG-AAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEEETT-SCSSEEEEEECCCSC
T ss_pred eeeEEecc-CCCCcEEEEecCCCC
Confidence 99999865 677789999999985
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.8e-22 Score=212.42 Aligned_cols=302 Identities=11% Similarity=0.049 Sum_probs=206.1
Q ss_pred CCcEEEEccceeeeeEeeeeccccCC---cEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCeee--eEecCC
Q psy6127 197 SRTITKCSENLVRSYRVAKVFRENTD---KINSLDYSSDGSLLISCSD---------DDQIIIYDCEQGTSK--NTINSK 262 (515)
Q Consensus 197 ~~~~i~~wd~~~~~~~~~~~~~~h~~---~I~~l~~spd~~~lasgs~---------dg~i~iwd~~~~~~~--~~~~~~ 262 (515)
.++.+++|+ +..+++...+.+|.. .|.+++|||||++||+++. ++.|++||+.+++.+ ..+
T Consensus 34 ~d~~i~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--- 108 (719)
T 1z68_A 34 ADNNIVLYN--IETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--- 108 (719)
T ss_dssp TTSCEEEEE--SSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---
T ss_pred CCCCEEEEE--cCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---
Confidence 367899999 777777777777655 4999999999999999886 789999999988763 222
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe-cCCCCCe-----------------EEEEEcCCCCEEEE
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF-PGHVRKV-----------------SSLNLSPVDDSFIS 324 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~-~~h~~~v-----------------~~l~~~~~~~~l~s 324 (515)
...+..++|+|||+.++++. ++.|++||+.+++..... .++...| .+++|+|||+.|++
T Consensus 109 ~~~~~~~~~SPDG~~la~~~---~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 109 PRPIQYLCWSPVGSKLAYVY---QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp CSSBCCEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred CcccccceECCCCCEEEEEE---CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 25688999999999998875 889999999988765433 2333322 48999999999999
Q ss_pred EeCCC----------------------------------cEEEEEcCCCCeE--EEE-------ecCCCeeEEEECCCCC
Q psy6127 325 GSYDK----------------------------------TVRVWDLRQPNNV--GMI-------QLSGNKPIAAYDPEGL 361 (515)
Q Consensus 325 ~s~dg----------------------------------~i~iwd~~~~~~~--~~~-------~~~~~~~~~~~s~~~~ 361 (515)
++.|. .|++||+.+++.. ..+ .+...+..++|+||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 88652 7889999987652 111 1233467899999987
Q ss_pred EEEEEECCC----cEEEEE----eecCCCCCceeeecCCCCCcCeE-----EEEEcCCCCEEEE--EECCC--cEEEEEC
Q psy6127 362 AFAIGVNSD----SIKLYD----VRSYDKGPFASFKCPGERGCEWT-----GLKFSPDGKLILV--STNGS--IIRLFDA 424 (515)
Q Consensus 362 ~l~~g~~dg----~i~i~d----~~~~~~~~~~~~~~~~~~~~~i~-----~l~~sp~~~~l~~--~s~dg--~i~iwd~ 424 (515)
++++....+ .|.+|| ..+++...... .....+...+. .+.|+|||+.++. +..+| .|.+||+
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE-HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE-EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCCceEEEEe-cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence 777654332 478888 55543221110 00013333444 6899999996654 43555 5777787
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCC--Ce-EEEEEcC---CCCCCeEEEEECC
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAER--GY-KVCVLDG---DHPSAVQSLQFNP 493 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~--~~-~~~~~~~---~h~~~V~~l~~sp 493 (515)
.+++ ...+.. ....+..+.++ +++.++..+.+ +..++|.+.. +. ....+.. .|...+..+.|+|
T Consensus 345 ~~~~-~~~lt~---~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~ 419 (719)
T 1z68_A 345 TVEN-AIQITS---GKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSD 419 (719)
T ss_dssp CSTT-CEECSC---SSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECG
T ss_pred CCCc-eEeccc---CceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECC
Confidence 7766 333432 22336677777 88777766654 7888888753 42 1233322 1556788999999
Q ss_pred CCCEEEEe-eC----CEEEEcCCC
Q psy6127 494 KYHMLASA-CS----NMAFWIPTL 512 (515)
Q Consensus 494 ~~~~las~-~~----dv~iW~~~~ 512 (515)
++++++.. ++ .+.+|++..
T Consensus 420 dg~~l~~~~s~~~~p~~~l~d~~~ 443 (719)
T 1z68_A 420 YAKYYALVCYGPGIPISTLHDGRT 443 (719)
T ss_dssp GGSSEEEEECCBSSCEEEEECSSS
T ss_pred CCCEEEEEcCCCCCCeEEEEECCC
Confidence 99877754 32 267887754
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-21 Score=203.39 Aligned_cols=267 Identities=11% Similarity=0.055 Sum_probs=193.8
Q ss_pred EEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECC
Q psy6127 175 SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD---DDQIIIYDCE 251 (515)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~---dg~i~iwd~~ 251 (515)
..+++++++. +++.+..++.+.+|+ +..++..+....+...+.+++|+|| +++++++. +...++|.+.
T Consensus 26 ~~~~~~DG~~------la~~s~~~g~~~lw~--~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 26 SLQGVVDGDK------LLVVGFSEGSVNAYL--YDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp EEEEEETTTE------EEEEEEETTEEEEEE--EETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred eeecCCCCCe------EEEEEccCCceeEEE--EcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 3344455554 555555578899998 6666655544444478999999999 78887775 4555665543
Q ss_pred C---CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC
Q psy6127 252 Q---GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD 328 (515)
Q Consensus 252 ~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d 328 (515)
. +... .+... ......+|+|+++.+++++++.+ .+.+||+.+++.......+. .+++|+|||+.|++++.|
T Consensus 97 ~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp TTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEE
T ss_pred ccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEc
Confidence 3 3322 34333 23557799999998888876544 45599999988766554333 789999999999988877
Q ss_pred ----CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCC--cEEEEEeecCCCCCceeeecCCCCCcCeEEEE
Q psy6127 329 ----KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD--SIKLYDVRSYDKGPFASFKCPGERGCEWTGLK 402 (515)
Q Consensus 329 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~ 402 (515)
+.|++||+.+++......+...+..++|+|||+.|+++..++ .|++||+.+++ .. ....+...+..++
T Consensus 171 ~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~-----~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS-----VE-DLELPSKDFSSYR 244 (582)
T ss_dssp ETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC-----EE-ECCCSCSHHHHHC
T ss_pred CCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc-----EE-EccCCCcChhhhh
Confidence 789999999988775555566688999999999999888888 89999988754 22 3334444455556
Q ss_pred --------EcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC---cEEEEECCC
Q psy6127 403 --------FSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG---QVHIWNAER 471 (515)
Q Consensus 403 --------~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg---~I~iwd~~~ 471 (515)
|+|||..+++++.++.+++|++ ++..... ...+.+++|+ +++++++++.+. .+++||..+
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~------~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAP------QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCC------SSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccC------CCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 9999988889999999999999 6654421 1337899999 999999888774 477777653
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.3e-22 Score=212.20 Aligned_cols=281 Identities=14% Similarity=0.112 Sum_probs=195.7
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCC---ceeEEEEecCCCeEEEEEe-------eCCCeEEEEECC
Q psy6127 226 SLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY---GVDLIKFTHSKTTAIHAST-------KVDATLRYLSLH 295 (515)
Q Consensus 226 ~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~s~-------~~d~~v~vwd~~ 295 (515)
+++|+|||+++++ +.|++|++||+.+++....+..+.. .+.+++|+|||+.+++++. +.++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999966555 4699999999999988777765543 4899999999999988874 126899999999
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC-------------------CeeEEEE
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG-------------------NKPIAAY 356 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-------------------~~~~~~~ 356 (515)
+++.+.... ....+..++|+|||+.|+.+. |+.|++||+.+++......... ....++|
T Consensus 99 ~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 99 NGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 988731111 135688999999999999885 7899999999887754332111 1147999
Q ss_pred CCCCCEEEEEECCC----------------------------------cEEEEEeecCCCCCceee---ecCCCCCcCeE
Q psy6127 357 DPEGLAFAIGVNSD----------------------------------SIKLYDVRSYDKGPFASF---KCPGERGCEWT 399 (515)
Q Consensus 357 s~~~~~l~~g~~dg----------------------------------~i~i~d~~~~~~~~~~~~---~~~~~~~~~i~ 399 (515)
+|||+.|++++.|. .+++||+.++.......+ .....+...+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 99999999987552 778898876431000011 01124666789
Q ss_pred EEEEcCCCCEEEEEECC----CcEEEEE----CCCCceeEEee-ccccCCCCCE-----EEEEecCCCEEEE--EeCCC-
Q psy6127 400 GLKFSPDGKLILVSTNG----SIIRLFD----AFNGNCVQSLS-GVLNNNASPL-----EATFTPDSQFVAS--GSTDG- 462 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s~d----g~i~iwd----~~~~~~~~~~~-~~~~~~~~i~-----~~~~sp~g~~l~s--gs~dg- 462 (515)
.++|+||++++++.... ..|.+|| ..++++...+. ....+...+. .++|+|||+.++. ...+|
T Consensus 257 ~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~ 336 (719)
T 1z68_A 257 WLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGY 336 (719)
T ss_dssp EEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSC
T ss_pred EeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCc
Confidence 99999998777664432 2488999 87777655442 0011222244 7899999996554 44555
Q ss_pred -cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC-------CEEEEcCCC
Q psy6127 463 -QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS-------NMAFWIPTL 512 (515)
Q Consensus 463 -~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~-------dv~iW~~~~ 512 (515)
.|++||+.+++ ...+.. +...+..+.++ +++.++..+. ..++|.++.
T Consensus 337 ~~l~~~~~~~~~-~~~lt~-~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 337 KHIHYIKDTVEN-AIQITS-GKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEEESSCSTT-CEECSC-SSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred eEEEEEECCCCc-eEeccc-CceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 57778887776 344544 55668887777 7776665543 388998765
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-19 Score=177.77 Aligned_cols=252 Identities=10% Similarity=0.091 Sum_probs=175.8
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeeeeEecCC-CCceeEEEEecCCCeEEEEEee-------------
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCE-QGTSKNTINSK-KYGVDLIKFTHSKTTAIHASTK------------- 284 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~~------------- 284 (515)
+...+..++|+|||++|++++.+ .|.+|++. +++........ .+....++|+|+++.+++++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 44568899999999999999987 99999997 77765433211 1235668999999864443332
Q ss_pred CCCeEEEEECC-CCeeeEEec----CCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcC-CCCeEE--EEe---cCCCee
Q psy6127 285 VDATLRYLSLH-DNKYVRYFP----GHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLR-QPNNVG--MIQ---LSGNKP 352 (515)
Q Consensus 285 ~d~~v~vwd~~-~~~~~~~~~----~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~-~~~~~~--~~~---~~~~~~ 352 (515)
.++.+.+|++. +++....+. .+...+.+++|+|||+++++++. ++.|++||+. +++... .+. +...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 58999999997 465543332 25567999999999998887764 6899999998 676532 233 134578
Q ss_pred EEEECCCCCEEEEEEC-CCcEEEEEeecCCCCCc---eeeecC-CC---CCc------CeEEEE-EcCCCCEEEEEECCC
Q psy6127 353 IAAYDPEGLAFAIGVN-SDSIKLYDVRSYDKGPF---ASFKCP-GE---RGC------EWTGLK-FSPDGKLILVSTNGS 417 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~~~~---~~~~~~-~~---~~~------~i~~l~-~sp~~~~l~~~s~dg 417 (515)
.++|+|+|++++++.. ++.+.+|++........ ...... .. +.. .+..++ |+|||++|+++..+.
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 8999999999988775 68999998864211111 112221 11 121 477899 999999988776432
Q ss_pred ------cEEEEECC-CCceeEEeeccccCCCCCEEEEEec---CCCEEEEEeCC-CcEEEEECCCC
Q psy6127 418 ------IIRLFDAF-NGNCVQSLSGVLNNNASPLEATFTP---DSQFVASGSTD-GQVHIWNAERG 472 (515)
Q Consensus 418 ------~i~iwd~~-~~~~~~~~~~~~~~~~~i~~~~~sp---~g~~l~sgs~d-g~I~iwd~~~~ 472 (515)
.|.+|++. +++..............+..++|+| ||++|++++.+ +.|.+|+++..
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999996 5664432110111222356789999 89999998864 89999998766
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.9e-21 Score=188.23 Aligned_cols=275 Identities=11% Similarity=0.025 Sum_probs=191.0
Q ss_pred cEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 223 KINSLDYSSDGSLLISCSDD---DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
.+.+++|+|||++|+.+... ..|.+||+.+++.......+......+.|+|+++.+++++ .++.+++||+.+++.
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~--~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVK--NELNLMKVDLETLEE 114 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEE--TTTEEEEEETTTCCE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEE--cCCcEEEEECCCCCc
Confidence 37788999999998887653 4788999988876544333333333478999999988876 577999999998877
Q ss_pred eEEecCCCCCeEE-------------------EEEcCCCCEEEEE-----eCCCcEEEEEcCCCCeEEEEecCCCeeEEE
Q psy6127 300 VRYFPGHVRKVSS-------------------LNLSPVDDSFISG-----SYDKTVRVWDLRQPNNVGMIQLSGNKPIAA 355 (515)
Q Consensus 300 ~~~~~~h~~~v~~-------------------l~~~~~~~~l~s~-----s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 355 (515)
......+...... +.|+|+++.++.+ ..+..|.+||+.+++..........+..+.
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 194 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPI 194 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccce
Confidence 6665545443322 3467777765544 356789999999988777666666688899
Q ss_pred ECC-CCCEEEEEECC------CcEEEEEeecCCCCCceeeecCCC-CCcCeEEEEEcCCCCEEEEEECC-----CcEEEE
Q psy6127 356 YDP-EGLAFAIGVNS------DSIKLYDVRSYDKGPFASFKCPGE-RGCEWTGLKFSPDGKLILVSTNG-----SIIRLF 422 (515)
Q Consensus 356 ~s~-~~~~l~~g~~d------g~i~i~d~~~~~~~~~~~~~~~~~-~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iw 422 (515)
|+| +++.++..+.+ ..|.+||+.... ....... ....+..++|+|+|++|+.++.+ +.|++|
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-----VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-----CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-----eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 999 78878777654 357777775432 1111122 13357789999999988776543 449999
Q ss_pred ECCCCceeEEeeccccCCCCCEEEEEec-CCCEEEEEe----------------CCCcEEEEECCCCeEEEEEcCCCCC-
Q psy6127 423 DAFNGNCVQSLSGVLNNNASPLEATFTP-DSQFVASGS----------------TDGQVHIWNAERGYKVCVLDGDHPS- 484 (515)
Q Consensus 423 d~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~sgs----------------~dg~I~iwd~~~~~~~~~~~~~h~~- 484 (515)
|+.+++...... ... .. ..|+| ||+++++++ .++.|++||+.+++... +.. +..
T Consensus 270 d~~~g~~~~l~~-~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~-~~~~ 341 (396)
T 3c5m_A 270 NPETLENEEVMV-MPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK-LCK-HSTS 341 (396)
T ss_dssp CTTTCCEEEEEE-CCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE-EEE-CCCC
T ss_pred ECCCCCeEEeee-CCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE-ccC-CCCc
Confidence 998887543322 111 23 89999 999888754 34789999998887533 333 333
Q ss_pred ----------CeEEEEECCCCCEEEEeeC---CEEEEcCCC
Q psy6127 485 ----------AVQSLQFNPKYHMLASACS---NMAFWIPTL 512 (515)
Q Consensus 485 ----------~V~~l~~sp~~~~las~~~---dv~iW~~~~ 512 (515)
.+..++|+|||+.|+.++. ...+|.++.
T Consensus 342 ~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 342 WDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp CCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 2567899999998887763 356776553
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-20 Score=188.99 Aligned_cols=215 Identities=15% Similarity=0.195 Sum_probs=164.0
Q ss_pred CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-----------C-----eEEEEecCCC
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP-----------N-----NVGMIQLSGN 350 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~-----------~-----~~~~~~~~~~ 350 (515)
+.+++|+.... .+...++.+++++++.++++++.|+ +++|+.... . ....+.+...
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 56777764211 1344688999999999999999988 889875311 1 1123344566
Q ss_pred eeEEEECCCCCEEE----EEECCCcEEEEEeecC-----CC-CCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcE
Q psy6127 351 KPIAAYDPEGLAFA----IGVNSDSIKLYDVRSY-----DK-GPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSII 419 (515)
Q Consensus 351 ~~~~~~s~~~~~l~----~g~~dg~i~i~d~~~~-----~~-~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i 419 (515)
+.+++|+|++++|+ +|+.|+.|++||+++. +. .+.........|...|.+++|+|+ +.+|++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 6778999999999864 11 222334555678889999999998 8899999999999
Q ss_pred EEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC------CCCCCeEEEEECC
Q psy6127 420 RLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG------DHPSAVQSLQFNP 493 (515)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~------~h~~~V~~l~~sp 493 (515)
++||++++........|. ..+.+++|+|+|++|++|+.||.|++||.+ ++....+.. .|...|.+++|++
T Consensus 175 ~iwD~~~~~~~~~~~~~~---~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 175 AVLQVTETVKVCATLPST---VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEEEESSSEEEEEEECGG---GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred EEEEcCCCcceeeccCCC---CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 999999987665555443 349999999999999999999999999998 666666544 1223899999999
Q ss_pred CCCEEEEee-CC--------EEEEcCCCC
Q psy6127 494 KYHMLASAC-SN--------MAFWIPTLS 513 (515)
Q Consensus 494 ~~~~las~~-~d--------v~iW~~~~~ 513 (515)
++.++++.+ ++ +++|++...
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 998886543 22 889998753
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-20 Score=185.88 Aligned_cols=246 Identities=10% Similarity=0.154 Sum_probs=172.5
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----------eeeeE-----ecCCCCceeEEEEecCCCeEEEE--E
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG----------TSKNT-----INSKKYGVDLIKFTHSKTTAIHA--S 282 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~----------~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~--s 282 (515)
+...++.+++++++.++++++.|+ +++|+.... ..... ...+...|.+++|+|+++.++++ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 345689999999999999999988 899875311 00110 11245679999999999988754 5
Q ss_pred eeCCCeEEEEECCCC--------e---eeEEecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCC
Q psy6127 283 TKVDATLRYLSLHDN--------K---YVRYFPGHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLRQPNNVGMI-QLSG 349 (515)
Q Consensus 283 ~~~d~~v~vwd~~~~--------~---~~~~~~~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~ 349 (515)
++.|+.|++||+.++ + ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++...... .+..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 568999999998765 2 24566789999999999998 789999999999999999998665443 4456
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC----CCCCcCeEEEEEcCCCCEEEEEE-CCC------c
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP----GERGCEWTGLKFSPDGKLILVST-NGS------I 418 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~----~~~~~~i~~l~~sp~~~~l~~~s-~dg------~ 418 (515)
.+.+++|+|+|++|++|+.||.|++||.+ +.. ...+... ..|...+.+++|++++.++++.+ .+| .
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~--~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE--KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCE--EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc--cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 79999999999999999999999999987 221 1122111 12334789999999988776533 443 3
Q ss_pred EEEEECCCCce--eEEeeccc-------cCCCCCEEEEEecCCCEEEEEeC-CCcEEEEEC
Q psy6127 419 IRLFDAFNGNC--VQSLSGVL-------NNNASPLEATFTPDSQFVASGST-DGQVHIWNA 469 (515)
Q Consensus 419 i~iwd~~~~~~--~~~~~~~~-------~~~~~i~~~~~sp~g~~l~sgs~-dg~I~iwd~ 469 (515)
+++|+++..+. ...+..+. ....+-..+.+-++.+++++++. .+.|.+...
T Consensus 271 v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 271 VVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp EEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred eEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence 89999986521 11111111 11112233444477777766653 445666654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-20 Score=198.46 Aligned_cols=284 Identities=13% Similarity=0.131 Sum_probs=191.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCc-----eeEEEEecCCCeEEEEEeeC-------CCeE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG-----VDLIKFTHSKTTAIHASTKV-------DATL 289 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~s~~~-------d~~v 289 (515)
....+++|+|||++++++ |++|++||+.++++...+.+|... ...++|+|||+.+++.+... .+.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345688999999999886 899999999999988888777543 23488999999998877411 1678
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-------------------CC
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-------------------GN 350 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------------------~~ 350 (515)
.+||+.+++.. .+..|...+...+|+|||+.|+.+. |+.|++||+.+++..+..... ..
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 89999999865 4667888999999999999998884 689999999988765432111 11
Q ss_pred eeEEEECCCCCEEEEEECCC------------------------------------cEEEEEeec---CCCCCceeeecC
Q psy6127 351 KPIAAYDPEGLAFAIGVNSD------------------------------------SIKLYDVRS---YDKGPFASFKCP 391 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg------------------------------------~i~i~d~~~---~~~~~~~~~~~~ 391 (515)
...+.|||||+.|+.++.|. .+++||+.+ +.......+...
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 23489999999999876332 356666665 321111112111
Q ss_pred C---CCCcCeEEEEEcCCCCEEEEEEC----CCcEEEEECCCCc----eeE--Ee--eccccCCC--CCEEEEEecCCCE
Q psy6127 392 G---ERGCEWTGLKFSPDGKLILVSTN----GSIIRLFDAFNGN----CVQ--SL--SGVLNNNA--SPLEATFTPDSQF 454 (515)
Q Consensus 392 ~---~~~~~i~~l~~sp~~~~l~~~s~----dg~i~iwd~~~~~----~~~--~~--~~~~~~~~--~i~~~~~sp~g~~ 454 (515)
. .+...+..++|+|||+.++.... +..|++||+.+++ +.. .+ ..+..... .....+|+|||+.
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~ 332 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNS 332 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCE
Confidence 0 25667889999999997665543 2379999999887 322 12 22221111 0236789999998
Q ss_pred EE-EEeC-CC--cEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCE-EEEeeC------CEEEEcCCC
Q psy6127 455 VA-SGST-DG--QVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHM-LASACS------NMAFWIPTL 512 (515)
Q Consensus 455 l~-sgs~-dg--~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~-las~~~------dv~iW~~~~ 512 (515)
++ ..+. +| .|++||..+++... +.. ....|..+.+ +|++. +++++. ...||.++.
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~-g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDKKDCTF-ITK-GTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTCSSCEE-SCC-SSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred EEEEEEcCCCceEEEEEECCCCceEe-ccc-CCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEEC
Confidence 77 6653 33 58889988776554 333 3445665542 33444 444443 256666543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-20 Score=194.79 Aligned_cols=290 Identities=9% Similarity=-0.001 Sum_probs=203.8
Q ss_pred eeccccCCcEEEEEEcCCCCEEEEE--eCCCeEEEEECCCCeeeeEecCCCCcee---------EEEEe--cCCCe-EEE
Q psy6127 215 KVFRENTDKINSLDYSSDGSLLISC--SDDDQIIIYDCEQGTSKNTINSKKYGVD---------LIKFT--HSKTT-AIH 280 (515)
Q Consensus 215 ~~~~~h~~~I~~l~~spd~~~lasg--s~dg~i~iwd~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~ 280 (515)
..+.+|...+..++|++++-++++. +.++...||....+.....+..+...+. ...|+ ||++. +++
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 3567899999999999987777777 5688999999655666667777766666 66676 99998 665
Q ss_pred EEeeCCCeEEEEECC--C-CeeeEEecC-----CCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEEcCC----
Q psy6127 281 ASTKVDATLRYLSLH--D-NKYVRYFPG-----HVRKVSSLNLSPVDDSFISGSYD----------KTVRVWDLRQ---- 338 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~--~-~~~~~~~~~-----h~~~v~~l~~~~~~~~l~s~s~d----------g~i~iwd~~~---- 338 (515)
++ ..+..|.++++. . ++ ...+.. |...+.+++|+|||+.|++++.| ..|++||+.+
T Consensus 97 ~~-~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 97 TH-FGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EB-TTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EE-CCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 54 346778888776 3 43 445555 67789999999999999998877 5899999988
Q ss_pred --CCeEEEE-ecCCCeeEEEECCCCCEEEEEECC--------CcEEEEEee-cCCCCCceeeecCCCCCcCeEEEEEcCC
Q psy6127 339 --PNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNS--------DSIKLYDVR-SYDKGPFASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 339 --~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~d--------g~i~i~d~~-~~~~~~~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
++..... .....+..++|+|||++|+.++.+ ..|.+||+. ++.... .......+...+..++|+||
T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~--~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 175 DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD--TRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE--EEEEEEETTBCEEEEEECTT
T ss_pred cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc--cEEeCCCCCceEcceEECCC
Confidence 5554433 334456778999999999988755 379999998 331111 11222234567889999999
Q ss_pred CCEEEEEECCC--cEEEEECCCCceeEEeeccccCCC-----CCEEEEEecCCCEEEEEeCCCcEEEE--ECCCCeEEEE
Q psy6127 407 GKLILVSTNGS--IIRLFDAFNGNCVQSLSGVLNNNA-----SPLEATFTPDSQFVASGSTDGQVHIW--NAERGYKVCV 477 (515)
Q Consensus 407 ~~~l~~~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~-----~i~~~~~sp~g~~l~sgs~dg~I~iw--d~~~~~~~~~ 477 (515)
|++++++..++ .|++||..+++.......+..... .+..++|+|+++++++++. +.+++| |..+++ +..
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~ 330 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVD 330 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEE
T ss_pred CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEE
Confidence 99777777787 566677667765443332221110 1457899999999999998 999999 666565 566
Q ss_pred EcCCCCCCeEEE-EECCCCCEEEEeeCC--EEEEcCC
Q psy6127 478 LDGDHPSAVQSL-QFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 478 ~~~~h~~~V~~l-~~sp~~~~las~~~d--v~iW~~~ 511 (515)
+.. |.+.+..+ +++++..++++++.+ ..+|.++
T Consensus 331 l~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 331 AAG-PWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp CCS-SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred ecC-CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 766 77778877 665554455555543 4555543
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-19 Score=175.29 Aligned_cols=231 Identities=12% Similarity=0.062 Sum_probs=171.6
Q ss_pred EEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC-CCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCeEEEEe
Q psy6127 269 IKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV-RKVSSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQ 346 (515)
Q Consensus 269 ~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~ 346 (515)
+++++++..+++. +.++.|++||..+++.+..+..+. ..+..++|+|+++.++ ++..++.|.+||+.+++....+.
T Consensus 5 ~~~~~~~~~~v~~--~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 5 PALKAGHEYMIVT--NYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCTTCEEEEEE--ETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccccCCCEEEEEe--CCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 3455655444433 479999999999999888876543 2578999999998654 55578999999999998887776
Q ss_pred cCCC-------eeEEEECCCCCEEEEEECC------------CcEEEEEeecCCCCC-ceeeecCCCCCcCeEEEEEcCC
Q psy6127 347 LSGN-------KPIAAYDPEGLAFAIGVNS------------DSIKLYDVRSYDKGP-FASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 347 ~~~~-------~~~~~~s~~~~~l~~g~~d------------g~i~i~d~~~~~~~~-~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
.... +..++|+|+|+++++++.+ +.|.+||+.+++... ..... +...+.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~s~d 158 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP----MPRQVYLMRAADD 158 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE----CCSSCCCEEECTT
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc----CCCcccceeECCC
Confidence 5332 6789999999999998865 899999998743211 11111 1224678999999
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEeecccc------------------------------------------------
Q psy6127 407 GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN------------------------------------------------ 438 (515)
Q Consensus 407 ~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~------------------------------------------------ 438 (515)
|+ +++++ +.|++||..+++....+.....
T Consensus 159 g~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 159 GS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp SC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred Cc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 99 66554 3499999999887766543210
Q ss_pred -----------------CCCCCEEEEEec-CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEE
Q psy6127 439 -----------------NNASPLEATFTP-DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500 (515)
Q Consensus 439 -----------------~~~~i~~~~~sp-~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las 500 (515)
....+..++|+| +|++++++ ++.|.+||+.+++.+..+.. ...+.+++|+|++++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEE
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEEE
Confidence 001245677889 99999988 88999999999999888864 345779999999988777
Q ss_pred eeC--CEEEEcCCC
Q psy6127 501 ACS--NMAFWIPTL 512 (515)
Q Consensus 501 ~~~--dv~iW~~~~ 512 (515)
++. .+++|+++.
T Consensus 312 ~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 312 GGTFNDLAVFNPDT 325 (349)
T ss_dssp ESBSSEEEEEETTT
T ss_pred ecCCCeEEEEeccc
Confidence 653 499999864
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.7e-19 Score=174.63 Aligned_cols=273 Identities=11% Similarity=0.041 Sum_probs=181.9
Q ss_pred EEEEEeCC--CeEEEEEC--CCCeeeeE--ec-CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC-CCeeeEEecC-
Q psy6127 235 LLISCSDD--DQIIIYDC--EQGTSKNT--IN-SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH-DNKYVRYFPG- 305 (515)
Q Consensus 235 ~lasgs~d--g~i~iwd~--~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~-~~~~~~~~~~- 305 (515)
+++.|+.. +.|.+|++ .+++.... .. .....+..++|+|+++.+++++ .+ .|.+|++. +++.......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~--~~-~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA--MK-KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE--BT-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc--cc-eEEEEEECCCCCEEEeeEee
Confidence 35556543 46777654 45554322 21 2334688999999999887665 34 99999997 7776543321
Q ss_pred CCCCeEEEEEcCCCCE--EEEEe-------------CCCcEEEEEcC-CCCeEEEEe-----cCCCeeEEEECCCCCEEE
Q psy6127 306 HVRKVSSLNLSPVDDS--FISGS-------------YDKTVRVWDLR-QPNNVGMIQ-----LSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 306 h~~~v~~l~~~~~~~~--l~s~s-------------~dg~i~iwd~~-~~~~~~~~~-----~~~~~~~~~~s~~~~~l~ 364 (515)
..+.+.+++|+|+|++ +++++ .++++.+|++. .++....+. ....+..++|+|+|++++
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 0123556899999994 44553 68999999997 466544433 334588899999999888
Q ss_pred EEEC-CCcEEEEEee-cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECC--CCceeE---Eeecc
Q psy6127 365 IGVN-SDSIKLYDVR-SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAF--NGNCVQ---SLSGV 436 (515)
Q Consensus 365 ~g~~-dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~--~~~~~~---~~~~~ 436 (515)
++.. ++.|++||+. +++......... ..+...+..++|+|+|+++++++. ++.+.+|++. +++... .+...
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDA-PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEEC-SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEec-CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 7764 6799999998 443111111111 112456789999999999988875 6899999765 565422 22221
Q ss_pred cc----CCC------CCEEEE-EecCCCEEEEEeCC-C-----cEEEEECC-CCeEEE---EEcCCCCCCeEEEEECC--
Q psy6127 437 LN----NNA------SPLEAT-FTPDSQFVASGSTD-G-----QVHIWNAE-RGYKVC---VLDGDHPSAVQSLQFNP-- 493 (515)
Q Consensus 437 ~~----~~~------~i~~~~-~sp~g~~l~sgs~d-g-----~I~iwd~~-~~~~~~---~~~~~h~~~V~~l~~sp-- 493 (515)
.. +.. .+..++ |+|||++|++++.+ + .|.+|++. +++... .... +...+..++|+|
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-PTSGGHSNAVSPCP 318 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-SSCCTTCCCEEECT
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-CCCCcccceecCCC
Confidence 11 111 377899 99999998877543 2 89999996 676543 2322 444567899999
Q ss_pred -CCCEEEEeeC---CEEEEcCCC
Q psy6127 494 -KYHMLASACS---NMAFWIPTL 512 (515)
Q Consensus 494 -~~~~las~~~---dv~iW~~~~ 512 (515)
||++|++++. .+++|+++.
T Consensus 319 ~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 319 WSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TCTTEEEEECSSSCEEEEEEEET
T ss_pred cCCCEEEEEEcCCCeEEEEEEch
Confidence 8999998863 489998753
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-20 Score=183.88 Aligned_cols=300 Identities=14% Similarity=0.068 Sum_probs=197.9
Q ss_pred cchhhccccccccCCceeE-------EEEEEeeccccceeeeeeeCCCCc--EEEEccceeeeeEeeeeccccCCcEEEE
Q psy6127 157 WDFELLHSLSSLESPHFVS-------LFVTFVSRVLTMAASLAHSRSSRT--ITKCSENLVRSYRVAKVFRENTDKINSL 227 (515)
Q Consensus 157 wd~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~s~~~~~--~i~~wd~~~~~~~~~~~~~~h~~~I~~l 227 (515)
+|..++..+..+..+.... .+++++++. +++....++ .+++|+ ...++......+|...+..+
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~------l~~~~~~~g~~~l~~~d--~~~g~~~~lt~~~~~~~~~~ 86 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSK------LLFGGAFDGPWNYYLLD--LNTQVATQLTEGRGDNTFGG 86 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCE------EEEEECTTSSCEEEEEE--TTTCEEEECCCSSCBCSSSC
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCE------EEEEEcCCCCceEEEEe--CCCCceEEeeeCCCCCccce
Confidence 4566676666666554322 234444443 444444333 466677 66777777777887777778
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEE--EecCCCeEEEEE--------------------eeC
Q psy6127 228 DYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIK--FTHSKTTAIHAS--------------------TKV 285 (515)
Q Consensus 228 ~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~s--------------------~~~ 285 (515)
+|+|||+.|+.++.++.+++||+.+++.......+...+.... ++|++..++... ...
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 8999999999999999999999999988777766666554444 478888776432 123
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEEcCCCCeEEEEecCC--CeeEEEE
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP-VDDSFISGSYD------KTVRVWDLRQPNNVGMIQLSG--NKPIAAY 356 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~--~~~~~~~ 356 (515)
+..|.+||+.+++.... ..+...+..++|+| ||+.|+.++.+ ..|.++|...++......... .+....|
T Consensus 167 ~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp CEEEEEEETTTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEE
T ss_pred cceEEEEECCCCceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceE
Confidence 47899999999875444 35667899999999 99988877753 378888887665444333332 3567899
Q ss_pred CCCCCEEEEEEC-CC----cEEEEEeecCCCCCceeeecCCCCCc---CeEEEEEcCCCCEEEEE---------ECCCcE
Q psy6127 357 DPEGLAFAIGVN-SD----SIKLYDVRSYDKGPFASFKCPGERGC---EWTGLKFSPDGKLILVS---------TNGSII 419 (515)
Q Consensus 357 s~~~~~l~~g~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~~---~i~~l~~sp~~~~l~~~---------s~dg~i 419 (515)
+|+|+.|+..+. ++ .|++||+.+++....... ..... ....++|+|||+.|+.. ..+..|
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSM---PACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEE---CCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcC---CCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 999998766543 22 399999987652211111 11000 01123799999988754 446689
Q ss_pred EEEECCCCceeEEeeccccC--------CCCCEEEEEecCCCEEEEEe-CCCcEEEEEC
Q psy6127 420 RLFDAFNGNCVQSLSGVLNN--------NASPLEATFTPDSQFVASGS-TDGQVHIWNA 469 (515)
Q Consensus 420 ~iwd~~~~~~~~~~~~~~~~--------~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~ 469 (515)
++||+.+++.. .+..+... ...+..++|+|||+.|+..+ .+|...+|.+
T Consensus 323 ~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 323 YVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 99999887653 34333220 00367789999999887665 4666666644
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-18 Score=187.12 Aligned_cols=302 Identities=12% Similarity=0.045 Sum_probs=199.2
Q ss_pred CcEEEEccceeeeeEeeeeccccCCc-----EEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCeeeeEecCCC
Q psy6127 198 RTITKCSENLVRSYRVAKVFRENTDK-----INSLDYSSDGSLLISCSDD---------DQIIIYDCEQGTSKNTINSKK 263 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~~~h~~~-----I~~l~~spd~~~lasgs~d---------g~i~iwd~~~~~~~~~~~~~~ 263 (515)
++.+++|+ +.++++...+.+|... ...++|||||++|+.++.+ +.+.+||+.+++.. .+..+.
T Consensus 35 ~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~ 111 (740)
T 4a5s_A 35 ENNILVFN--AEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIP 111 (740)
T ss_dssp TTEEEEEE--TTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCC
T ss_pred CCcEEEEE--CCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCC
Confidence 67899999 7777777778887643 2347889999999999876 56679999988765 466677
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE-ecCCCCCe-----------------EEEEEcCCCCEEEEE
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY-FPGHVRKV-----------------SSLNLSPVDDSFISG 325 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~-~~~h~~~v-----------------~~l~~~~~~~~l~s~ 325 (515)
..+...+|+|||+.++++. ++.|++||+.+++..+. ..++...+ ..+.|+|||+.|+.+
T Consensus 112 ~~~~~~~~SPdG~~la~~~---~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 112 NNTQWVTWSPVGHKLAYVW---NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp TTEEEEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CcceeeEECCCCCEEEEEE---CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 8899999999999998875 89999999988875542 22333323 348999999999987
Q ss_pred eCCC------------------------------------cEEEEEcCC---CC--eEEEEe-------cCCCeeEEEEC
Q psy6127 326 SYDK------------------------------------TVRVWDLRQ---PN--NVGMIQ-------LSGNKPIAAYD 357 (515)
Q Consensus 326 s~dg------------------------------------~i~iwd~~~---~~--~~~~~~-------~~~~~~~~~~s 357 (515)
+.|. +|++||+.+ ++ ....+. +...+..++|+
T Consensus 189 ~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws 268 (740)
T 4a5s_A 189 QFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWA 268 (740)
T ss_dssp EEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE
T ss_pred EEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEe
Confidence 6332 478899988 73 222332 23346789999
Q ss_pred CCCCEEEEEECC----CcEEEEEeecCC----CCCceeeecCCCCCcCe-----EEEEEcCCCCEEE-EEEC-C--CcEE
Q psy6127 358 PEGLAFAIGVNS----DSIKLYDVRSYD----KGPFASFKCPGERGCEW-----TGLKFSPDGKLIL-VSTN-G--SIIR 420 (515)
Q Consensus 358 ~~~~~l~~g~~d----g~i~i~d~~~~~----~~~~~~~~~~~~~~~~i-----~~l~~sp~~~~l~-~~s~-d--g~i~ 420 (515)
|||+.++..... ..|.+||+.+++ ......+.. ..+...+ ..+.|+|||+.++ ..+. + ..|+
T Consensus 269 pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~-~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~ 347 (740)
T 4a5s_A 269 TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE-MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHIC 347 (740)
T ss_dssp ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE-ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEE
T ss_pred CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee-ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEE
Confidence 999977765432 379999998865 111111100 1222222 2678999999877 6653 3 3688
Q ss_pred EEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----C--cEEEEECCCCeEEEEEcC---CCCCCeEEEE
Q psy6127 421 LFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----G--QVHIWNAERGYKVCVLDG---DHPSAVQSLQ 490 (515)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g--~I~iwd~~~~~~~~~~~~---~h~~~V~~l~ 490 (515)
+||..+++......+ ...+..+. .+|++.|+..+.. + .|+..++..+.....+.. .....+..+.
T Consensus 348 ~~~~~~~~~~~lT~g----~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~ 422 (740)
T 4a5s_A 348 YFQIDKKDCTFITKG----TWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVS 422 (740)
T ss_dssp EEETTCSSCEESCCS----SSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEE
T ss_pred EEECCCCceEecccC----CEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEE
Confidence 889887665433322 22244443 3456655544332 3 344555554443334432 1235688999
Q ss_pred ECCCCCEEEEee-C----CEEEEcCC
Q psy6127 491 FNPKYHMLASAC-S----NMAFWIPT 511 (515)
Q Consensus 491 ~sp~~~~las~~-~----dv~iW~~~ 511 (515)
|+|++++++... + .+.+++.+
T Consensus 423 ~S~dg~~~~~~~s~~~~p~~~l~~~~ 448 (740)
T 4a5s_A 423 FSKEAKYYQLRCSGPGLPLYTLHSSV 448 (740)
T ss_dssp ECTTSSEEEEEECSBSSCEEEEEETT
T ss_pred ECCCCCEEEEEeCCCCCCEEEEEECC
Confidence 999999776543 2 25555543
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.82 E-value=6e-18 Score=166.27 Aligned_cols=274 Identities=8% Similarity=0.023 Sum_probs=196.3
Q ss_pred CCCEEEEEe------CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------eCCCeEEEEECCCC
Q psy6127 232 DGSLLISCS------DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------KVDATLRYLSLHDN 297 (515)
Q Consensus 232 d~~~lasgs------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~~d~~v~vwd~~~~ 297 (515)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+|+++.++++.. ..++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 566666554 3689999999999998888877555 8999999999998762 13678999999998
Q ss_pred eeeEEecCC------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEE-EecCCCeeEEEECCCC-CEEEEEE
Q psy6127 298 KYVRYFPGH------VRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGM-IQLSGNKPIAAYDPEG-LAFAIGV 367 (515)
Q Consensus 298 ~~~~~~~~h------~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~s~~~-~~l~~g~ 367 (515)
+.+..+... ......++++|||++|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEEC
Confidence 888776532 245678999999999998874 68999999999988877 65544 3335677765 6778888
Q ss_pred CCCcEEEEEeecCCCCCceee---ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce--eEEeeccc-----
Q psy6127 368 NSDSIKLYDVRSYDKGPFASF---KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC--VQSLSGVL----- 437 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~---~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~--~~~~~~~~----- 437 (515)
.||.+.+|+........ ... ........++ .+.++|++..++..+.++.+.++|+..... ...+....
T Consensus 171 ~dg~~~~v~~~~~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVA-SQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKA 248 (361)
T ss_dssp TTSSEEEEEECTTSSEE-EEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHH
T ss_pred CCCcEEEEEECCCCcEe-eeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccc
Confidence 99999999986522110 000 1111112222 344467787888788899999999875532 12221100
Q ss_pred -c-CCCCCEEEEEecCCCEEEEEeC-----------CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-C
Q psy6127 438 -N-NNASPLEATFTPDSQFVASGST-----------DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-S 503 (515)
Q Consensus 438 -~-~~~~i~~~~~sp~g~~l~sgs~-----------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-~ 503 (515)
. .......++|+|+++.++++.. .+.|.+||+.+++.+.++.. +. +.+++|+|||++|++++ +
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-~~--p~~ia~spdg~~l~v~n~~ 325 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-RD--ALSMTIDQQRNLMLTLDGG 325 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC-TT--CCEEEEETTTTEEEEECSS
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec-CC--eeEEEECCCCCEEEEeCCC
Confidence 0 0011234789999988877643 34799999999999999987 54 89999999999888876 4
Q ss_pred CEEEEcCCCC
Q psy6127 504 NMAFWIPTLS 513 (515)
Q Consensus 504 dv~iW~~~~~ 513 (515)
++.+||....
T Consensus 326 ~v~v~D~~t~ 335 (361)
T 2oiz_A 326 NVNVYDISQP 335 (361)
T ss_dssp CEEEEECSSS
T ss_pred eEEEEECCCC
Confidence 5999998754
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=7.9e-17 Score=152.79 Aligned_cols=245 Identities=11% Similarity=0.170 Sum_probs=181.2
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC------CCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS------KKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
.+|-..+.+++++|+++++++.+.++.|.+||.. ++....+.. +...+..+++.+.+..++++..+.++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4667789999999999988888889999999987 666665542 335688999964444555554223789999
Q ss_pred EECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec---CCCeeEEEECCCCCEEEEEE
Q psy6127 292 LSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL---SGNKPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 292 wd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~s~~~~~l~~g~ 367 (515)
|| .+++.+..+. .+...+.+++++|+|+.+++...++.|.+||.. ++....+.. ...+..++++|+|+++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 5677666664 344678999999999988887788999999964 555555532 23478899999999888777
Q ss_pred CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC-cEEEEECCCCceeEEeeccccCCCCCEEE
Q psy6127 368 NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-IIRLFDAFNGNCVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 446 (515)
.++.|++||.... ....+. ...+...+.+++++|+|+++++...++ .|.+||. +++.+..+..+.. ...+..+
T Consensus 183 ~~~~i~~~~~~g~---~~~~~~-~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~-~~~~~~i 256 (286)
T 1q7f_A 183 RAHCVKVFNYEGQ---YLRQIG-GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVK-HAQCFDV 256 (286)
T ss_dssp GGTEEEEEETTCC---EEEEES-CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSC-CSCEEEE
T ss_pred CCCEEEEEcCCCC---EEEEEc-cCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCC-CCcceeE
Confidence 8999999997431 111111 112235678999999998888877775 9999995 5777776665432 2236789
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 447 TFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 447 ~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
+++|+|+++++ +.|+.|++|++...
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EECCCCcEEEE-CCCCeEEEEEcccc
Confidence 99999987776 57999999998654
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-17 Score=160.39 Aligned_cols=258 Identities=8% Similarity=0.090 Sum_probs=179.1
Q ss_pred CcEEEEEEcCCCCEEEEEe---------CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC---CCeE
Q psy6127 222 DKINSLDYSSDGSLLISCS---------DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV---DATL 289 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs---------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~---d~~v 289 (515)
..+...++ ||++++... .++.|.+||+.+++... + ..+..++|+|+|+.+++++... ...|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 44666777 888887653 25789999999876543 3 5688899999999998887432 2348
Q ss_pred EEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC---------------------------CcEEEEEcCCCCeE
Q psy6127 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD---------------------------KTVRVWDLRQPNNV 342 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d---------------------------g~i~iwd~~~~~~~ 342 (515)
.+||+.+++.......+ . +..++|+|||+.|+.++.+ ..|.+||+.+++.+
T Consensus 88 ~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 88 WVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 88899888776555433 3 9999999999988887643 56999999988773
Q ss_pred EEEecCCCeeEEEECCCCCEEEEEECCC-------cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC
Q psy6127 343 GMIQLSGNKPIAAYDPEGLAFAIGVNSD-------SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN 415 (515)
Q Consensus 343 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg-------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~ 415 (515)
..+... .+..++|+|+| +++++..++ ...+|.+.+++ ...+. .+ ..+..+ +|+|++|+.++.
T Consensus 166 ~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~---~~~l~---~~-~~~~~~--spdg~~l~~~~~ 234 (347)
T 2gop_A 166 EEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK---EEKMF---EK-VSFYAV--DSDGERILLYGK 234 (347)
T ss_dssp EEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE---EEEEE---EE-ESEEEE--EECSSCEEEEEC
T ss_pred eeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc---eEEec---cC-cceeeE--CCCCCEEEEEEc
Confidence 444334 68889999999 777776542 45666665221 11221 11 344444 999999988775
Q ss_pred C--------CcEEEEECCCCceeEEeeccccCCCCCEE-EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCe
Q psy6127 416 G--------SIIRLFDAFNGNCVQSLSGVLNNNASPLE-ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAV 486 (515)
Q Consensus 416 d--------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~-~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 486 (515)
+ ..|.+|| +++....... +...+.. +.|+ ++ ++++++.++.+++| +.+++...... +.+.|
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~---~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~--~~~~v 304 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVMGILDE---VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK--GRHWI 304 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEEESSTT---CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC--SSSEE
T ss_pred cccCCccccceEEEEC--CCceEecccc---CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec--CCCeE
Confidence 4 3688888 5554333222 2233665 8899 88 89999999999999 87776654443 56789
Q ss_pred EEEEECCCCCEEEEeeCC---EEEEcCC
Q psy6127 487 QSLQFNPKYHMLASACSN---MAFWIPT 511 (515)
Q Consensus 487 ~~l~~sp~~~~las~~~d---v~iW~~~ 511 (515)
.+++|+| .++++++.+ .++|.++
T Consensus 305 ~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 305 MGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9999999 566655532 4788764
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-17 Score=157.19 Aligned_cols=243 Identities=12% Similarity=0.134 Sum_probs=181.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeCC------------------------CeEEEEECCCCeeeeEec-CCCCceeEEEEecCC
Q psy6127 221 TDKINSLDYSSDGSLLISCSDD------------------------DQIIIYDCEQGTSKNTIN-SKKYGVDLIKFTHSK 275 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~d------------------------g~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 275 (515)
-+.+.+++++|+|+++++.+.+ ++|.+||..+++....+. .+-.....++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888877 479999999888877664 344578999999999
Q ss_pred CeEEEEEeeCCCeEEEEECCCCe-eeEEe---------cCCCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEEcCCCCeEE
Q psy6127 276 TTAIHASTKVDATLRYLSLHDNK-YVRYF---------PGHVRKVSSLNLSP-VDDSFISGS-YDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~~-~~~~~---------~~h~~~v~~l~~~~-~~~~l~s~s-~dg~i~iwd~~~~~~~~ 343 (515)
+ ++++. ..++.|++||..... .+..+ .++......++++| ++..+++.+ .++.|++|| .+++.+.
T Consensus 103 ~-l~v~d-~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 103 N-YWVTD-VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp C-EEEEE-TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred C-EEEEE-CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 8 44333 468999999986542 44544 34555789999999 788888876 689999999 5677776
Q ss_pred EEecC-----------CCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 344 MIQLS-----------GNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 344 ~~~~~-----------~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
.+... ..+..++++|+ +.++++...++.|++||..+++. ...+. ...+...+..++|+| +..+.
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~-~~~~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIK-HASFGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEEC-CTTTTTCEEEEEEET-TEEEE
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEe-ccccCCCcceeeecC-CEEEE
Confidence 66322 12678999998 77777777889999999875431 11221 223455677999999 43333
Q ss_pred EE-------ECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 412 VS-------TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 412 ~~-------s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
+. ..+..|++||..+++.+..+.........+..++++|+|.++++...++.|++|++.
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 32 334589999999999888875333344458999999999888888889999999975
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-17 Score=176.16 Aligned_cols=296 Identities=11% Similarity=0.037 Sum_probs=186.3
Q ss_pred ccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEE---------EEEEc--CCCCE-
Q psy6127 168 LESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKIN---------SLDYS--SDGSL- 235 (515)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~---------~l~~s--pd~~~- 235 (515)
+.+|...+...++.+..... +...++.++...+|. .......+.+..|...+. ...|+ |||+.
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~---~~~~~~~~~~~~l~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~ 93 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWW---VAPRPAEAGRATLVR--RRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPL 93 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEE---EEEETTTTTEEEEEE--ECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCE
T ss_pred HhhcCCccceeEEcCCeEEE---EecCcccCCcEEEEE--ECCCCCcceeCCCCccccccccccCCccceeeeecCCCeE
Confidence 33444445555665543211 121224455666775 222333456677766666 66665 99998
Q ss_pred EEEEeC-CCeEEEEECC--CCeeeeEecC-----CCCceeEEEEecCCCeEEEEEeeCC--------CeEEEEECCC---
Q psy6127 236 LISCSD-DDQIIIYDCE--QGTSKNTINS-----KKYGVDLIKFTHSKTTAIHASTKVD--------ATLRYLSLHD--- 296 (515)
Q Consensus 236 lasgs~-dg~i~iwd~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~s~~~d--------~~v~vwd~~~--- 296 (515)
|+.++. +..|.+|+.. .......+.. |...+..++|+|||+.+++++.... ..|++||+.+
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 776654 4566667665 2034455555 5677899999999999988773211 5899999988
Q ss_pred ---CeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCC--------cEEEEEcC-CC---CeEEEEec-CCCeeEEEECCC
Q psy6127 297 ---NKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDK--------TVRVWDLR-QP---NNVGMIQL-SGNKPIAAYDPE 359 (515)
Q Consensus 297 ---~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg--------~i~iwd~~-~~---~~~~~~~~-~~~~~~~~~s~~ 359 (515)
++. ..+. .+...+..++|+|||+.|+.++.++ .|++||+. ++ +....... ...+..+.|+||
T Consensus 174 ~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 174 ADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp TCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred ccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 554 4455 5667888999999999999887553 79999999 56 33333333 456888999999
Q ss_pred CCEEEEEECCCcEEEEEee--cCCCCCceeeecCCCCCcC--------eEEEEEcCCCCEEEEEECCCcEEEE--ECCCC
Q psy6127 360 GLAFAIGVNSDSIKLYDVR--SYDKGPFASFKCPGERGCE--------WTGLKFSPDGKLILVSTNGSIIRLF--DAFNG 427 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~--------i~~l~~sp~~~~l~~~s~dg~i~iw--d~~~~ 427 (515)
|++++++..++..++|.+. +++ .......+... +..++|+|+++++++++. +.+++| |..++
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~-----~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~ 326 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGA-----ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG 326 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCC-----EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT
T ss_pred CeEEEEECCCCCeEEEEEECCCCc-----eeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC
Confidence 9977777778854454443 332 11111111111 457899999999999988 999999 55555
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCC--EEEEEeCCC--cEEEEECCCCeEEEEEcC
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQ--FVASGSTDG--QVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~--~l~sgs~dg--~I~iwd~~~~~~~~~~~~ 480 (515)
+ +..+..+. ..+..+ ++++++ ++++++.+. .|++||+.+++.......
T Consensus 327 ~-~~~l~~~~---~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 327 E-LVDAAGPW---TEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp E-EEECCSSC---CEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESC
T ss_pred c-EEEecCCC---CeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecC
Confidence 4 55555432 224544 144554 333444443 566677778776554433
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-17 Score=159.57 Aligned_cols=277 Identities=13% Similarity=0.138 Sum_probs=194.4
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
..|.+++|+|++..++..+.++.++.| .++....+..+...+.+++|++++. ++++. ..++.|.+||..+++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~-l~~~~-~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQ-LFLLD-VFEGNIFKINPETKEIKR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSC-EEEEE-TTTCEEEEECTTTCCEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCC-EEEEE-CCCCEEEEEeCCCCcEEE
Confidence 457788999998888877888999999 3566677777777889999999987 33332 468999999999887665
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCCeEEEEe---cCCCeeEEEECCCCCEEEEEEC------
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYD----KTVRVWDLRQPNNVGMIQ---LSGNKPIAAYDPEGLAFAIGVN------ 368 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~g~~------ 368 (515)
....+...+.+++++|+++++++...+ +.|.+||.+++.....+. ....+..++++|+|+++++...
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 554567789999999999988877666 689999998887654432 2234788999999988776643
Q ss_pred CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE-ECCCcEEEEECCC-CceeEEee-----ccccCCC
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS-TNGSIIRLFDAFN-GNCVQSLS-----GVLNNNA 441 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~-s~dg~i~iwd~~~-~~~~~~~~-----~~~~~~~ 441 (515)
.+.|..+|....+ ...+. .....+..++|+|++++++++ +.++.|.+||..+ +.....+. .... ..
T Consensus 161 ~~~l~~~~~~~~~---~~~~~---~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~ 233 (333)
T 2dg1_A 161 LGGVYYVSPDFRT---VTPII---QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HE 233 (333)
T ss_dssp CEEEEEECTTSCC---EEEEE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SS
T ss_pred CceEEEEeCCCCE---EEEee---cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-CC
Confidence 2344444433221 11111 112246789999999876555 4578999999864 43332211 1111 12
Q ss_pred CCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCC------CeEEEEECCCCCEEEEee-C-----CEEEEc
Q psy6127 442 SPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPS------AVQSLQFNPKYHMLASAC-S-----NMAFWI 509 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~------~V~~l~~sp~~~~las~~-~-----dv~iW~ 509 (515)
.+..++++++|+++++...++.|.+||. +++.+..+.. +.. .+.+++|+||+..|..++ . ...||.
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~-~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~ 311 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI-PGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYT 311 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEEC-TTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEE
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEc-CCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEE
Confidence 3678999999998888777899999998 5677666654 322 689999999986665443 2 256776
Q ss_pred CCC
Q psy6127 510 PTL 512 (515)
Q Consensus 510 ~~~ 512 (515)
++.
T Consensus 312 ~~~ 314 (333)
T 2dg1_A 312 VNG 314 (333)
T ss_dssp EEC
T ss_pred Eec
Confidence 543
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-15 Score=154.11 Aligned_cols=309 Identities=13% Similarity=0.073 Sum_probs=220.1
Q ss_pred eeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeeeeEecCCCCceeEEE
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCE--QGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~ 270 (515)
.+..++..+.++| ..+++.+.++... ..+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ....++
T Consensus 171 V~~~~~~~V~viD--~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia 246 (567)
T 1qks_A 171 VTLRDAGQIALID--GSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIE 246 (567)
T ss_dssp EEETTTTEEEEEE--TTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEE
T ss_pred EEeCCCCeEEEEE--CCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeE
Confidence 3556677788888 6677777776543 356799999999999999999999999995 788888887643 467899
Q ss_pred Ee----cCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC----------CCC-CeEEEEEcCCCCE-EEEEeCCCcEEEE
Q psy6127 271 FT----HSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG----------HVR-KVSSLNLSPVDDS-FISGSYDKTVRVW 334 (515)
Q Consensus 271 ~~----~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~----------h~~-~v~~l~~~~~~~~-l~s~s~dg~i~iw 334 (515)
|+ |+|++++++. ..++++.++|..+.+.+..+.- |.. .+..+..++++.. +++...+|.|.++
T Consensus 247 ~s~~~~pDGk~l~v~n-~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~v 325 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGA-YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV 325 (567)
T ss_dssp ECCSTTCTTTEEEEEE-EETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred EccccCCCCCEEEEEE-ccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEE
Confidence 99 6999988877 4689999999999988876542 222 6788999998774 4555667999999
Q ss_pred EcCCCCeEE--EEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCCCE
Q psy6127 335 DLRQPNNVG--MIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDGKL 409 (515)
Q Consensus 335 d~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~~~ 409 (515)
|....+... .+........+.|+|+|++++++. .++.|.++|+.+++. ...... ...|.+....+ ++|++..
T Consensus 326 d~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl--~~~i~vgg~~Phpg~g~~~-~~p~~g~ 402 (567)
T 1qks_A 326 DYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL--VAIEDTGGQTPHPGRGANF-VHPTFGP 402 (567)
T ss_dssp ETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSSBCCTTCEEE-EETTTEE
T ss_pred ecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE--EEEEeccCcCCCCccceee-ECCCCCc
Confidence 998765433 334444567889999999987766 578999999987542 112222 12232222122 6887555
Q ss_pred EE-EEE-CCCcEEEEECCC-------CceeEEeeccccCCCCCEEEEEecCCCEEEEEeC-------CCcEEEEECCCC-
Q psy6127 410 IL-VST-NGSIIRLFDAFN-------GNCVQSLSGVLNNNASPLEATFTPDSQFVASGST-------DGQVHIWNAERG- 472 (515)
Q Consensus 410 l~-~~s-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~-------dg~I~iwd~~~~- 472 (515)
+. ++. .++.|.++|..+ .+.++.+...... -..+..+|+++++++... .+.|.++|+.+.
T Consensus 403 v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g---~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 479 (567)
T 1qks_A 403 VWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG---SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMT 479 (567)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC---CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCC
T ss_pred EEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCC---CEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccc
Confidence 54 443 468999999987 5677777654222 345788999999998763 358999999876
Q ss_pred ----e-EEEEEc-------CCCCCCeEEEEECCCCCEEEEe-------eCCEEEEcCCC
Q psy6127 473 ----Y-KVCVLD-------GDHPSAVQSLQFNPKYHMLASA-------CSNMAFWIPTL 512 (515)
Q Consensus 473 ----~-~~~~~~-------~~h~~~V~~l~~sp~~~~las~-------~~dv~iW~~~~ 512 (515)
. ....+. +.....+..+.|+|+|+.+..+ ++.+.|+|...
T Consensus 480 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 480 GDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 538 (567)
T ss_dssp CSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred ccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence 2 113332 1124578999999999977665 23488887654
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.4e-18 Score=168.36 Aligned_cols=267 Identities=12% Similarity=0.050 Sum_probs=173.1
Q ss_pred CCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeE--------
Q psy6127 197 SRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDL-------- 268 (515)
Q Consensus 197 ~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~-------- 268 (515)
++..+.+|+ ...++......++......+.|+|||++|+.++.++.|++||+.+++.......+......
T Consensus 58 g~~~l~~~d--~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~ 135 (396)
T 3c5m_A 58 GNRNYYLLN--LETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSD 135 (396)
T ss_dssp SSCEEEEEE--TTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTT
T ss_pred CCceEEEEE--CCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEecc
Confidence 344566666 4445544444444333344789999999999999999999999988776655544432222
Q ss_pred -----------EEEecCCCeEEEEE---eeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC-CCCEEEEEeCC-----
Q psy6127 269 -----------IKFTHSKTTAIHAS---TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP-VDDSFISGSYD----- 328 (515)
Q Consensus 269 -----------~~~~~~~~~l~~~s---~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~s~d----- 328 (515)
..|+|+++.+++.. ...+..|++||+.+++..... .+...+..+.|+| +++.|+..+.+
T Consensus 136 ~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~ 214 (396)
T 3c5m_A 136 CTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLV 214 (396)
T ss_dssp SSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSC
T ss_pred CCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCC
Confidence 24566666554432 024678999999988765544 4677899999999 78877766653
Q ss_pred -CcEEEEEcCCCCeEEEEecC--CCeeEEEECCCCCEEEEEECC-----CcEEEEEeecCCCCCceeeecCCCCCcCeEE
Q psy6127 329 -KTVRVWDLRQPNNVGMIQLS--GNKPIAAYDPEGLAFAIGVNS-----DSIKLYDVRSYDKGPFASFKCPGERGCEWTG 400 (515)
Q Consensus 329 -g~i~iwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~ 400 (515)
..|.+||+..++........ ..+..++|+|+|+.|+.++.+ +.|++||+.+++.. .+.... ...
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~---~l~~~~----~~~- 286 (396)
T 3c5m_A 215 DARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE---EVMVMP----PCS- 286 (396)
T ss_dssp SCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE---EEEECC----SEE-
T ss_pred CceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE---EeeeCC----CCC-
Confidence 36888998766544333321 136678999999988777544 44999998765421 111111 123
Q ss_pred EEEcC-CCCEEEEEE----------------CCCcEEEEECCCCceeEEeeccccCC--------CCCEEEEEecCCCEE
Q psy6127 401 LKFSP-DGKLILVST----------------NGSIIRLFDAFNGNCVQSLSGVLNNN--------ASPLEATFTPDSQFV 455 (515)
Q Consensus 401 l~~sp-~~~~l~~~s----------------~dg~i~iwd~~~~~~~~~~~~~~~~~--------~~i~~~~~sp~g~~l 455 (515)
+.|+| +|+++++++ .++.|++||+.+++.. .+..+.... ..+..++|+|||+.|
T Consensus 287 ~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 365 (396)
T 3c5m_A 287 HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGV 365 (396)
T ss_dssp EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEE
T ss_pred CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeE
Confidence 89999 999888765 3478999999887653 333322110 014567899999988
Q ss_pred EEEeC-CCc--EEEEECCCCeEE
Q psy6127 456 ASGST-DGQ--VHIWNAERGYKV 475 (515)
Q Consensus 456 ~sgs~-dg~--I~iwd~~~~~~~ 475 (515)
+.++. ++. |+.+++.+++..
T Consensus 366 ~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 366 LFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp EEEECTTSSCEEEEEECCTTCC-
T ss_pred EEEecCCCCceEEEEEEcccccc
Confidence 87764 454 455555555443
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-15 Score=145.96 Aligned_cols=243 Identities=11% Similarity=0.068 Sum_probs=172.7
Q ss_pred CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy6127 253 GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVR 332 (515)
Q Consensus 253 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~ 332 (515)
+..+..+..+.....+++|+|+++.++.+. ..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|.
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~-~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSD-VRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEE-GGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEe-CCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 334445555566788999999998666555 46899999999887 566666778899999999999887777778999
Q ss_pred EEEcCCCCeEEEEec-----CCCeeEEEECCCCCEEEEEECC---------------CcEEEEEeecCCCCCceeeecCC
Q psy6127 333 VWDLRQPNNVGMIQL-----SGNKPIAAYDPEGLAFAIGVNS---------------DSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 333 iwd~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~g~~d---------------g~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
+||..+++....... ...+..++++|+|+++++.+.. +.-.+|.+.... ..... .
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~~~---~ 168 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG--TLSAP---I 168 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS--CEEEE---E
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC--CEEEe---e
Confidence 999988876544321 1235679999999988873211 112445444321 11111 2
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC-CCce---eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF-NGNC---VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
........++|+|+++.+++.+.++.|++|++. +++. ...+ . .....+..++++++|+++++. ++.|.+||
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~--~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T--VEPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C--CSSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e--CCCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 334456799999999988767778899999987 5554 2333 1 123346789999999876665 78899999
Q ss_pred CCCCeEEEEEcCCCCCCeEEEEE-CCCCCEEEEeeCCEEEEcCCC
Q psy6127 469 AERGYKVCVLDGDHPSAVQSLQF-NPKYHMLASACSNMAFWIPTL 512 (515)
Q Consensus 469 ~~~~~~~~~~~~~h~~~V~~l~~-sp~~~~las~~~dv~iW~~~~ 512 (515)
.. ++.+..+.. +.. +++++| .|+++.|..++.+ .+|.++.
T Consensus 244 ~~-g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~ 284 (296)
T 3e5z_A 244 PD-GDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVST-EFWSIET 284 (296)
T ss_dssp TT-SCEEEEEEC-SSC-CCEEEEESTTSCEEEEEETT-EEEEEEC
T ss_pred CC-CCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcCC-eEEEEEc
Confidence 86 788887776 555 899999 6898888877765 4555443
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.6e-16 Score=149.30 Aligned_cols=242 Identities=11% Similarity=0.075 Sum_probs=175.4
Q ss_pred CCceeEEEEecCCCeEEEEEeeCC------------------------CeEEEEECCCCeeeEEec-CCCCCeEEEEEcC
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVD------------------------ATLRYLSLHDNKYVRYFP-GHVRKVSSLNLSP 317 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d------------------------~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~ 317 (515)
-..+.+++++|+|+.+++.. .+ +.|.+||..+++.+..+. ++-.....++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHR--GDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEEC--TTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeC--CCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 35688999999987554433 34 479999999898877664 4556799999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCC-eEEEEec----------CCCeeEEEECC-CCCEEEEEE-CCCcEEEEEeecCCCCC
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPN-NVGMIQL----------SGNKPIAAYDP-EGLAFAIGV-NSDSIKLYDVRSYDKGP 384 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~----------~~~~~~~~~s~-~~~~l~~g~-~dg~i~i~d~~~~~~~~ 384 (515)
+|+.+++...++.|++||..... .+..+.. -..+..++++| +++++++.+ .++.|++||... . .
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~--~ 177 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-K--F 177 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-C--E
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-C--E
Confidence 99988888889999999986542 4444421 12477899999 788888876 689999999432 2 1
Q ss_pred ceeeecCC-------CCCcCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 385 FASFKCPG-------ERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 385 ~~~~~~~~-------~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
...+.... .+......++++|+ +..+++...++.|++||..+++.+..+.... ....+..++|+| +..++
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-FGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-TTTCEEEEEEET-TEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-cCCCcceeeecC-CEEEE
Confidence 11111111 12234679999998 6666666678899999999899888875432 234478899999 43333
Q ss_pred E-------EeCCCcEEEEECCCCeEEEEEc--CCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 457 S-------GSTDGQVHIWNAERGYKVCVLD--GDHPSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 457 s-------gs~dg~I~iwd~~~~~~~~~~~--~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
+ ...+..|++||..+++.+..+. ..+...+.+++++|+|.++++..++ +++|+++
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 3 3345589999999999999884 1267789999999999777776544 8888765
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.4e-16 Score=151.22 Aligned_cols=250 Identities=11% Similarity=0.083 Sum_probs=168.1
Q ss_pred CcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC---C--eEEEEECCCCeeeeEecCCCCceeEEEEe
Q psy6127 198 RTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD---D--QIIIYDCEQGTSKNTINSKKYGVDLIKFT 272 (515)
Q Consensus 198 ~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d---g--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 272 (515)
+..+++|+ ...++... + ..+..++|||||++||.++.+ + .|.+|++.+++.......+ . +..++|+
T Consensus 42 ~~~l~~~d--~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~ws 112 (347)
T 2gop_A 42 ENTIVIEN--LKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWN 112 (347)
T ss_dssp EEEEEEEE--TTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEEC
T ss_pred cceEEEEe--CCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeEC
Confidence 34466666 33333322 2 568899999999999988754 3 4888898887766554443 3 9999999
Q ss_pred cCCCeEEEEEee-------------------------CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC
Q psy6127 273 HSKTTAIHASTK-------------------------VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY 327 (515)
Q Consensus 273 ~~~~~l~~~s~~-------------------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~ 327 (515)
|+++.+++++.. ....|++||+.+++.+..+.. . .+..++|+|+| .++++..
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEEC
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEec
Confidence 999998887631 135799999999887455544 3 78899999999 7777765
Q ss_pred CC-------cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC--------CcEEEEEeecCCCCCceeeecCC
Q psy6127 328 DK-------TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS--------DSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 328 dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d--------g~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
++ ...+|.+.+++....... ... ..++|+|+.++.++.+ ..|.+|| +++ ......
T Consensus 190 ~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-----~~~l~~ 259 (347)
T 2gop_A 190 REIIPQYFKFWDIYIWEDGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-----VMGILD 259 (347)
T ss_dssp CCSSCCSSCCEEEEEEETTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-----EEESST
T ss_pred ccccccccccccEEEeCCCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC--CCc-----eEeccc
Confidence 42 345554445544333333 223 3449999999887754 3577777 322 223334
Q ss_pred CCCcCeEE-EEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcE-EEEECC
Q psy6127 393 ERGCEWTG-LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQV-HIWNAE 470 (515)
Q Consensus 393 ~~~~~i~~-l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I-~iwd~~ 470 (515)
.+...+.. +.|+ ++ .+++++.++.+++| +.+++...... . ...+.+++|+| .++++++.++.. .+|.+.
T Consensus 260 ~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~-~---~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 260 EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK-G---RHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC-S---SSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec-C---CCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 45566776 8999 88 88889999999999 87665533332 2 33488899999 677777777654 777766
Q ss_pred CCeEEEEEcC
Q psy6127 471 RGYKVCVLDG 480 (515)
Q Consensus 471 ~~~~~~~~~~ 480 (515)
++ ...+..
T Consensus 331 -g~-~~~lt~ 338 (347)
T 2gop_A 331 -GE-EKQLTD 338 (347)
T ss_dssp -SS-EEECCC
T ss_pred -Cc-EEEecc
Confidence 55 334444
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-15 Score=141.02 Aligned_cols=241 Identities=7% Similarity=0.146 Sum_probs=172.6
Q ss_pred CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec------CCCCCeEEEEEc-CCCCEEEEEeC-CCcEE
Q psy6127 261 SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP------GHVRKVSSLNLS-PVDDSFISGSY-DKTVR 332 (515)
Q Consensus 261 ~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~------~h~~~v~~l~~~-~~~~~l~s~s~-dg~i~ 332 (515)
++-..+.++++++++.. +++. ..++.|.+||.. ++.+..+. +|...+..+++. +++..+++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l-~v~~-~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDI-IVAD-TNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCE-EEEE-GGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCE-EEEE-CCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 34466889999999863 3333 468999999987 55665553 344678999994 66666665543 89999
Q ss_pred EEEcCCCCeEEEEecC--CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEE
Q psy6127 333 VWDLRQPNNVGMIQLS--GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI 410 (515)
Q Consensus 333 iwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l 410 (515)
+|| .+++.+..+... ..+..++++|+|+++++...++.|.+||.... ....+. ...+...+.+++++|+|+.+
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---~~~~~~-~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---VLHKFG-CSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---EEEEEE-CTTTCSSEEEEEECSSSEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC---EEEEeC-CCCccCCcEEEEECCCCCEE
Confidence 999 667777666432 35788999999998888777899999996431 111121 11334467899999999877
Q ss_pred EEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC-cEEEEECCCCeEEEEEcCC-CCCCeEE
Q psy6127 411 LVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG-QVHIWNAERGYKVCVLDGD-HPSAVQS 488 (515)
Q Consensus 411 ~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~-h~~~V~~ 488 (515)
++...++.|++||. +++.+..+.... ....+..++++|+|+++++...++ .|.+||. +++.+..+... ....+.+
T Consensus 179 v~~~~~~~i~~~~~-~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 179 ISDNRAHCVKVFNY-EGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp EEEGGGTEEEEEET-TCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred EEECCCCEEEEEcC-CCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCccee
Confidence 77777899999997 556555554321 123478999999999888887776 9999995 56666666541 2234789
Q ss_pred EEECCCCCEEEEee-CCEEEEcCCC
Q psy6127 489 LQFNPKYHMLASAC-SNMAFWIPTL 512 (515)
Q Consensus 489 l~~sp~~~~las~~-~dv~iW~~~~ 512 (515)
++++|+|+++++.. +.+++|++..
T Consensus 256 i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 256 VALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEECCCCcEEEECCCCeEEEEEccc
Confidence 99999999887743 2399999864
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-14 Score=140.89 Aligned_cols=247 Identities=9% Similarity=0.001 Sum_probs=173.0
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC----C
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD----A 287 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d----~ 287 (515)
+....+.++...+.+++|+|+|++++++..++.|.+||.++++.......+...+.++++++++..++. + ..+ +
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~-~-~~~~~~~~ 112 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVC-Y-LGDFKSTG 112 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEE-E-CTTSSSCC
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEE-e-CCCCCCCc
Confidence 344556677778899999999998888888999999999888766555456678999999999874443 3 234 6
Q ss_pred eEEEEECCCCeeeEEec--CCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCCCeeEEEECCC
Q psy6127 288 TLRYLSLHDNKYVRYFP--GHVRKVSSLNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE 359 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~ 359 (515)
.|.+||.++++....+. .+...+.+++++|+|+.+++... .+.|..+|..+++..........+..++|+|+
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~d 192 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTD 192 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTT
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCC
Confidence 89999998876553332 34567999999999987776654 35566667666555444333344778999999
Q ss_pred CCEEEEE-ECCCcEEEEEeecCCCCCc----eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 360 GLAFAIG-VNSDSIKLYDVRSYDKGPF----ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 360 ~~~l~~g-~~dg~i~i~d~~~~~~~~~----~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
++.++++ +.++.|.+||+........ ........+ ..+..++++++|++.++...++.|.+||. +++.+..+.
T Consensus 193 g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~ 270 (333)
T 2dg1_A 193 EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQIL 270 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEE
Confidence 9866554 4578999999864211100 001111111 35678999999998887778889999998 566666665
Q ss_pred cccc---CCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 435 GVLN---NNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 435 ~~~~---~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
.... +...+.+++|+||++.|+.++.++
T Consensus 271 ~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 271 IPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred cCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 3321 111378999999988777666553
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=9.9e-14 Score=131.75 Aligned_cols=280 Identities=9% Similarity=0.051 Sum_probs=196.1
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE-ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT-INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
+..+...+.+++++++|++.++...++.|.+||.. ++.... ...+...+..+++.+++...+ +. ..++.|..||..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~-~~~~~i~~~~~~ 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWF-TE-NAANKIGRITKK 86 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEE-EE-TTTTEEEEECTT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEE-eC-CCCCeEEEECCC
Confidence 45566789999999999987776668899999988 554332 233456789999999886433 33 347889999986
Q ss_pred CCee-eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe--cCCCeeEEEECCCCCEEEEEECCCcE
Q psy6127 296 DNKY-VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKPIAAYDPEGLAFAIGVNSDSI 372 (515)
Q Consensus 296 ~~~~-~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i 372 (515)
++. ...+......+..+++.|++..+++...++.|..||. +++...... ....+..++++++|+.+++...++.|
T Consensus 87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred -CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 332 2222334567899999999988887777889999998 555443321 22447889999999888877677899
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
..||. +++. ..... ......+.+++++++|+..++...++.|..||. +++... +... .....+..++++++|
T Consensus 165 ~~~~~-~g~~---~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~-~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 165 GRITE-SGDI---TEFKI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIP-TPNARPHAITAGAGI 236 (299)
T ss_dssp EEECT-TCCE---EEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECS-STTCCEEEEEECSTT
T ss_pred EEEcC-CCcE---EEeeC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECC-CCCCCceeEEECCCC
Confidence 99987 4321 11111 223445779999999987666666789999998 666432 3221 123448899999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEE-EcCCCCCCeEEEEECCCCCEEEEee-CCEEEEcCCC
Q psy6127 453 QFVASGSTDGQVHIWNAERGYKVCV-LDGDHPSAVQSLQFNPKYHMLASAC-SNMAFWIPTL 512 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~~~~~~~-~~~~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~~ 512 (515)
+++++...++.|..||. +++.... +.. +...+.++++ +++.+.++.+ +.+..++++.
T Consensus 237 ~l~v~~~~~~~i~~~d~-~g~~~~~~~~~-~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 237 DLWFTEWGANKIGRLTS-NNIIEEYPIQI-KSAEPHGICF-DGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp CEEEEETTTTEEEEEET-TTEEEEEECSS-SSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-
T ss_pred CEEEeccCCceEEEECC-CCceEEEeCCC-CCCccceEEe-cCCCEEEEecCCcEEEEEcCc
Confidence 97776657789999998 5654332 233 5567999999 9998877764 3366666543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-15 Score=145.29 Aligned_cols=277 Identities=12% Similarity=0.044 Sum_probs=192.8
Q ss_pred CCcEEEEccceeeeeEeeeecc------ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEE
Q psy6127 197 SRTITKCSENLVRSYRVAKVFR------ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIK 270 (515)
Q Consensus 197 ~~~~i~~wd~~~~~~~~~~~~~------~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 270 (515)
.+..+..+| ..+++....+. ........+.+. +++..++...++.|.+||..+++.+.++.. ......++
T Consensus 15 ~~~~l~~~d--~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYD--PATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIH 90 (328)
T ss_dssp CCBEEEEEE--TTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEE
T ss_pred CCceEEEEE--CCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEE
Confidence 366677777 44445444331 122456778775 345555666679999999999999888853 46688999
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC-----CCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCCeEE
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV-----RKVSSLNLSPVDDSFISGS--YDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~ 343 (515)
+++++ .++++. ..++.|.+||..+++....+.... .....+++ . +..++.+. .++.|.++|.++++...
T Consensus 91 ~~~~g-~lyv~~-~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 91 FLSDE-KAYVTQ-IWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp EEETT-EEEEEE-BSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred EeCCC-eEEEEE-CCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 99988 555554 368999999999998877665332 14556777 3 55555554 48999999999999888
Q ss_pred EEecCCCeeEEEECCCCCEEEEEECC----------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE
Q psy6127 344 MIQLSGNKPIAAYDPEGLAFAIGVNS----------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS 413 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~l~~g~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~ 413 (515)
.+........+.++|+|++++++..+ +.|.++|..+.+. ...+.. ........++|+|++++++++
T Consensus 167 ~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v--~~~~~~--~~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 167 ELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV--EKQFKF--KLGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE--EEEEEC--CTTCCCEEEEECTTSCEEEEE
T ss_pred EEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE--EEEEec--CCCCCceeEEEecCCCEEEEE
Confidence 88776667889999999977776554 7899999876431 112221 112356799999999999887
Q ss_pred ECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC-CCEEEEE----eCCCcEEEEECCCCeEEEEEcCCCCCCeEE
Q psy6127 414 TNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD-SQFVASG----STDGQVHIWNAERGYKVCVLDGDHPSAVQS 488 (515)
Q Consensus 414 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~-g~~l~sg----s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 488 (515)
.. .|.+||..+++....... ......+..++++|+ +.+.++. ..++.|.+||.. ++.+.++.. ...-..
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~-~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~--G~~P~~ 316 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFL-EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV--GIIPGA 316 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSB-CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE--EESEEE
T ss_pred cc--EEEEEECCCCceeeeeee-cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe--ccCcce
Confidence 65 899999988875321111 111234789999994 5555555 568899999998 988888763 233455
Q ss_pred EEE
Q psy6127 489 LQF 491 (515)
Q Consensus 489 l~~ 491 (515)
++|
T Consensus 317 ~~~ 319 (328)
T 3dsm_A 317 FCW 319 (328)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.1e-16 Score=165.09 Aligned_cols=248 Identities=12% Similarity=0.078 Sum_probs=174.3
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCe-----
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDD-----QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT----- 288 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~----- 288 (515)
+|...+..++|||||++||.++.++ +|++||+.+++.......+ ..+..++|+||++.+++++. ++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~--~~~~~~~~ 198 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAY--PQQDGKSD 198 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEEC--CCCSSCCS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEE--CCcccccc
Confidence 4656789999999999999876543 8999999999876543222 23678999999999988873 433
Q ss_pred -----------EEEEECCCCee----eEEecCCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEcCC------CC-e
Q psy6127 289 -----------LRYLSLHDNKY----VRYFPGHVRKVSSLNLSPVDDSFISGSY-----DKTVRVWDLRQ------PN-N 341 (515)
Q Consensus 289 -----------v~vwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~l~s~s~-----dg~i~iwd~~~------~~-~ 341 (515)
|++|++.+++. +.....|...+..+.|+|||++|+.++. +..|.+||+.+ +. .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 99999988752 2222335667889999999998887765 57899999986 43 2
Q ss_pred EEEEecCCCeeEEEECCCCCEEEEEECCC----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC
Q psy6127 342 VGMIQLSGNKPIAAYDPEGLAFAIGVNSD----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS 417 (515)
Q Consensus 342 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg 417 (515)
...+..........|+|+|+.|+..+..+ .|.+||+.+........+.. ......+..++|++++.++++...++
T Consensus 279 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 279 WVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP-EHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-CCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred eEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC-CCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 34443222223346889999888776543 58889987643111122221 11223677899998887888888887
Q ss_pred c--EEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE-e---CCCcEEEEECCCCe
Q psy6127 418 I--IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG-S---TDGQVHIWNAERGY 473 (515)
Q Consensus 418 ~--i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg-s---~dg~I~iwd~~~~~ 473 (515)
. |++|++.+++.+..+..+ ...+..+.++|+++.++.. + ..+.++.||+.+++
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~---~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLE---VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCC---SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCC---CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4 667787778777777654 3337788999998766533 2 34789999998876
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.5e-15 Score=141.47 Aligned_cols=243 Identities=9% Similarity=0.018 Sum_probs=172.1
Q ss_pred eccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 216 VFRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 216 ~~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
.+..+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.++++++++..++ +. ..++.|.+||.
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v-~~-~~~~~i~~~d~ 97 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIA-CS-HGLRRLERQRE 97 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEE-EE-TTTTEEEEECS
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEE-Ee-cCCCeEEEEcC
Confidence 3445566788999999998 7788888999999999877 566667778899999999997443 33 34689999999
Q ss_pred CCCeeeEEecCC----CCCeEEEEEcCCCCEEEEEeC-----------------CCcEEEEEcCCCCeEEEEecCCCeeE
Q psy6127 295 HDNKYVRYFPGH----VRKVSSLNLSPVDDSFISGSY-----------------DKTVRVWDLRQPNNVGMIQLSGNKPI 353 (515)
Q Consensus 295 ~~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s~s~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~ 353 (515)
.+++........ ...+..++++|+|+++++.+. .+.|..+|.. ++.............
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNG 176 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCcc
Confidence 888765443221 234678999999998887321 3456566655 444433344445788
Q ss_pred EEECCCCCEEEEEECCCcEEEEEeec-CCC-CCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE
Q psy6127 354 AAYDPEGLAFAIGVNSDSIKLYDVRS-YDK-GPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ 431 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~dg~i~i~d~~~-~~~-~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~ 431 (515)
++|+|+++.+++.+.++.|.+|++.. +.. .....+ ......+.+++++++|++.++. ++.|.+||.. ++.+.
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~---~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF---TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE---CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEE
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe---eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEE
Confidence 99999999997777789999999972 211 001111 2234455689999999866655 7889999976 77777
Q ss_pred EeeccccCCCCCEEEEE-ecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 432 SLSGVLNNNASPLEATF-TPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~-sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
.+..+. . +.+++| +|+++.|++++.++ +.-++.++.+.
T Consensus 251 ~~~~~~---~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 251 RVLTPQ---T-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp EEECSS---C-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred EEECCC---C-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 666432 2 788999 58999999888764 55566665543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.5e-15 Score=141.77 Aligned_cols=255 Identities=10% Similarity=0.061 Sum_probs=181.9
Q ss_pred CCCeEEEEECCCCeeeeEec------CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEE
Q psy6127 241 DDDQIIIYDCEQGTSKNTIN------SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLN 314 (515)
Q Consensus 241 ~dg~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~ 314 (515)
.++.|.++|.++++....+. ........+.+ ++..++++. ..++.|.+||..+++.+.++. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~-~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVV-NNSHVIFAIDINTFKEVGRIT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEE-GGGTEEEEEETTTCCEEEEEE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEE-cCCCEEEEEECcccEEEEEcC-CCCCCcEEE
Confidence 37899999999988765541 11234566766 355666665 468999999999999988885 346789999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC------CeeEEEECCCCCEEEEEE--CCCcEEEEEeecCCCCCce
Q psy6127 315 LSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG------NKPIAAYDPEGLAFAIGV--NSDSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 315 ~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~s~~~~~l~~g~--~dg~i~i~d~~~~~~~~~~ 386 (515)
++++++.+++...++.|.+||..+++....+.... ....+++ ++..+.++. .++.|.++|..+.+. ..
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~--~~ 166 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV--VD 166 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE--EE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE--EE
Confidence 99988544444489999999999999887776555 5666777 444555544 488999999987541 11
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEEECC----------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVSTNG----------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
.+.. ......++++|+|++++++..+ +.|.++|..+++....+..... ..+..++|+|++++++
T Consensus 167 ~i~~----g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g--~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 167 ELTI----GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG--DWPSEVQLNGTRDTLY 240 (328)
T ss_dssp EEEC----SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT--CCCEEEEECTTSCEEE
T ss_pred EEEc----CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC--CCceeEEEecCCCEEE
Confidence 2221 1223478999999877666554 7899999999987776653221 2478999999999998
Q ss_pred EEeCCCcEEEEECCCCeEEEE-EcCCCCCCeEEEEECC-CCCEEEEe------eCCEEEEcCC
Q psy6127 457 SGSTDGQVHIWNAERGYKVCV-LDGDHPSAVQSLQFNP-KYHMLASA------CSNMAFWIPT 511 (515)
Q Consensus 457 sgs~dg~I~iwd~~~~~~~~~-~~~~h~~~V~~l~~sp-~~~~las~------~~dv~iW~~~ 511 (515)
++.. .|.+||..+++.... +...+......++++| ++.+.++. ++.+.+|+.+
T Consensus 241 v~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 241 WINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 8755 899999998876421 1111245789999999 66666665 2448888876
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.4e-14 Score=136.54 Aligned_cols=265 Identities=12% Similarity=0.001 Sum_probs=187.0
Q ss_pred EEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeeeeEecCC-------
Q psy6127 200 ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSK------- 262 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~------- 262 (515)
.+.++| ..+++.+.++.....+ .++++|||++++.+. .++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D--~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLD--AGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV 123 (373)
T ss_pred EEEEEE--CCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence 566666 5566777777654444 999999999999886 3678999999998888776543
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE-ecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCC
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY-FPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPN 340 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~ 340 (515)
......++|+|+|++++++....++.|.++| .+++.+.. +... . ++.+.|+++ .+++.+.||.+.++|. +++
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 1235689999999999988632368899999 99988877 5422 2 245556654 5677788999999999 887
Q ss_pred eEEEEe-----cC-CC-eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC-------CCCCcCeEEEEEcCC
Q psy6127 341 NVGMIQ-----LS-GN-KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP-------GERGCEWTGLKFSPD 406 (515)
Q Consensus 341 ~~~~~~-----~~-~~-~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~~i~~l~~sp~ 406 (515)
...... .. .+ .....+.+++..++..+.++.+.+.|+..........+... .........+.++|+
T Consensus 198 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d 277 (373)
T 2mad_H 198 AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKS 277 (373)
T ss_pred EEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCC
Confidence 664322 11 11 12235566666655555788999999865422111111110 001122345889999
Q ss_pred CCEEEEEEC----------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeE
Q psy6127 407 GKLILVSTN----------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASGS-TDGQVHIWNAERGYK 474 (515)
Q Consensus 407 ~~~l~~~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs-~dg~I~iwd~~~~~~ 474 (515)
++.++++.. ++.|.++|..+++.+..+.... ....++|+|||+ +++++. .++.|.+||..+++.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~----~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH----DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC----CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 998887653 3579999999999988886432 378999999999 777777 589999999999999
Q ss_pred EEEE
Q psy6127 475 VCVL 478 (515)
Q Consensus 475 ~~~~ 478 (515)
+..+
T Consensus 354 v~~i 357 (373)
T 2mad_H 354 DQST 357 (373)
T ss_pred Eeee
Confidence 9884
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-14 Score=156.34 Aligned_cols=242 Identities=9% Similarity=-0.005 Sum_probs=170.4
Q ss_pred CCCceeEEEEecCCCeEEEEEeeCCC----eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCc-------
Q psy6127 262 KKYGVDLIKFTHSKTTAIHASTKVDA----TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKT------- 330 (515)
Q Consensus 262 ~~~~v~~~~~~~~~~~l~~~s~~~d~----~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~------- 330 (515)
+...+..++|+|||+.+++++. .+| .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~-~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLS-ASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEE-ETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEc-CCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3346889999999999988763 233 8999999999877643222 23678999999999999988766
Q ss_pred ---------EEEEEcCCCCeE--EEEec---CCCeeEEEECCCCCEEEEEEC-----CCcEEEEEeec------CCCCCc
Q psy6127 331 ---------VRVWDLRQPNNV--GMIQL---SGNKPIAAYDPEGLAFAIGVN-----SDSIKLYDVRS------YDKGPF 385 (515)
Q Consensus 331 ---------i~iwd~~~~~~~--~~~~~---~~~~~~~~~s~~~~~l~~g~~-----dg~i~i~d~~~------~~~~~~ 385 (515)
|++|++.+++.. ..+.. ......+.|+|||++|+.++. +..+.+||+.+ +.. ..
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~ 279 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KW 279 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CC
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ce
Confidence 999999887632 22222 223568999999999988775 56899999976 321 12
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEECC----CcEEEEECCCCce--eEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVSTNG----SIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d----g~i~iwd~~~~~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
..+. .+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..+... ..+..++|++++.++++..
T Consensus 280 ~~l~---~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 280 VKLI---DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp EEEE---CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEEETTTEEEEEEE
T ss_pred EEee---CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEEEcCCEEEEEEE
Confidence 2222 22223333 588999988877653 3599999987742 2444433221 2367889998888888888
Q ss_pred CCCc--EEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEe-e-----CCEEEEcCCC
Q psy6127 460 TDGQ--VHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA-C-----SNMAFWIPTL 512 (515)
Q Consensus 460 ~dg~--I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~-~-----~dv~iW~~~~ 512 (515)
.|+. |++|++.+|+.+..+.. +.+.|..++++|++..++.. + +.+..|++..
T Consensus 355 ~~g~~~l~~~~~~~g~~~~~l~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGALLKIFPL-EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp ETTEEEEEEEETTTCCEEEEECC-CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred ECCEEEEEEEECCCCCEEEecCC-CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 8884 66778878888888877 67889999999998765533 2 2367777654
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.69 E-value=8.5e-15 Score=142.31 Aligned_cols=282 Identities=14% Similarity=0.089 Sum_probs=194.6
Q ss_pred cEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeeeeEecCCC-----
Q psy6127 199 TITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSKK----- 263 (515)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~~----- 263 (515)
..+.+-| ..+++.+.++.....+ . ++++|||+++++++ .++.|.+||..+++.+.++....
T Consensus 59 ~~V~ViD--~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~ 134 (386)
T 3sjl_D 59 TQQFVID--GEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL 134 (386)
T ss_dssp EEEEEEE--TTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CEEEEEE--CCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc
Confidence 4555556 5566777776655555 4 99999999988776 36789999999999988875332
Q ss_pred --CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CC
Q psy6127 264 --YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQ-PN 340 (515)
Q Consensus 264 --~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~-~~ 340 (515)
.....++|+|||++++++....++.|.++|..+++.+.++.-.. . ...+....+.+++.+.||++.+.++.+ ++
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~ 211 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 211 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence 24667999999999988763347899999999999998875321 1 222333345777888999999999976 55
Q ss_pred eEEEEe-cC----CCe-eEEEEC-CCCCEEEEEECCCcEEEEEeecCCCCCceeeec-------CCCCCcCeEEEEEcCC
Q psy6127 341 NVGMIQ-LS----GNK-PIAAYD-PEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-------PGERGCEWTGLKFSPD 406 (515)
Q Consensus 341 ~~~~~~-~~----~~~-~~~~~s-~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-------~~~~~~~i~~l~~sp~ 406 (515)
...... .. ..+ ....|. ++|++++ .+.+|.+.+.|+............. ..-....+..++++|+
T Consensus 212 v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 212 PEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA 290 (386)
T ss_dssp CEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred EEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence 432221 10 111 113553 5665444 5678999999987643211111110 0111122335788999
Q ss_pred CCEEEEEEC----------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeE
Q psy6127 407 GKLILVSTN----------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASGS-TDGQVHIWNAERGYK 474 (515)
Q Consensus 407 ~~~l~~~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs-~dg~I~iwd~~~~~~ 474 (515)
++.+++... .+.|.++|+.+++.++.+..... +..+++++|++ +|++.. .++.|.++|..+++.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~----~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE----IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE----ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC----cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 998888653 25799999999999998875432 67999999997 676654 589999999999999
Q ss_pred EEEEcCCCCCCeEEEEECCC
Q psy6127 475 VCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 475 ~~~~~~~h~~~V~~l~~sp~ 494 (515)
+.++.. .+.-+.+.+++|
T Consensus 367 ~~~i~~--~~~p~~l~~s~d 384 (386)
T 3sjl_D 367 LRSVNQ--LGHGPQVITTAD 384 (386)
T ss_dssp EEEECC--CCSSCCEEEECC
T ss_pred EEEecC--CCCCceeEECCc
Confidence 999975 344456677766
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.5e-16 Score=164.90 Aligned_cols=248 Identities=13% Similarity=0.048 Sum_probs=169.0
Q ss_pred cccCCcEEEEEEcCCCCEEE-----EEeCCCeEEEEECCCCeee-eEecCCCCceeEEEEecCCCeEEEEEeeCCCe---
Q psy6127 218 RENTDKINSLDYSSDGSLLI-----SCSDDDQIIIYDCEQGTSK-NTINSKKYGVDLIKFTHSKTTAIHASTKVDAT--- 288 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~la-----sgs~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~--- 288 (515)
.+|...+.+++|||||++|| .|+.+.+|++||+.+++.+ .. .........++|+||++.+++++ .+..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~--~d~~~~~ 193 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEW--LPTDPSI 193 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEE--CCCCTTS
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCEEEEEE--ecCCCCC
Confidence 35777899999999999999 4445578999999998865 21 11111126899999999988876 3444
Q ss_pred ----------EEEEECCCCe----eeEEecCCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEEcCCCCeEEEEecCCC
Q psy6127 289 ----------LRYLSLHDNK----YVRYFPGHVRKVSSLNLSPVDDSFISGSYDK----TVRVWDLRQPNNVGMIQLSGN 350 (515)
Q Consensus 289 ----------v~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~ 350 (515)
|++|++.++. .+.....|...+..+.|+|||++|+.++.++ .|.+||..+++..........
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 273 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA 273 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc
Confidence 9999998876 3333445667899999999999888877666 677777766665554444444
Q ss_pred eeEEEECCCCCEEEEEEC----CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC-
Q psy6127 351 KPIAAYDPEGLAFAIGVN----SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF- 425 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~- 425 (515)
.....+ ++|. ++..+. ++.|.+||+.++.......+. .......+..++|+ ++..+++...|+..++|.+.
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIV-PEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEE-CCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEe-cCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 555555 6666 555443 578999998764321112222 12224467788888 66778888889988887654
Q ss_pred CCceeEEeeccccCCCCCEEEEEecCCCEEEEEe----CCCcEEEEECCCCeE
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS----TDGQVHIWNAERGYK 474 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs----~dg~I~iwd~~~~~~ 474 (515)
+++....+..+ ....+..++++|+++.++... ..++|++||+.+++.
T Consensus 350 ~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 350 KGKPVRTVQLP--GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TCCEEEECCCS--SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCeeEEecCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 45555555432 122356678899998776332 347899999988764
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=9.6e-15 Score=136.89 Aligned_cols=240 Identities=9% Similarity=0.025 Sum_probs=168.2
Q ss_pred cEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 223 KINSLDYSSDGSLLI-SCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 223 ~I~~l~~spd~~~la-sgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
...+++++|+|++++ +.+.++.|.+||..++........+...+.++++.+++. ++++. . ++.|.+||........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~-~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTD-F-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEE-T-TTEEEEECTTCSCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEc-C-CCEEEEEeCCCceEee
Confidence 678999999998776 446789999999765543322223335678899999887 55544 3 8899999987665433
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecC
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSY 380 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~ 380 (515)
........+..+++.|+|+.+++...++.|.+|+..+........ ....+..++++++|+.+++...++.|.+||....
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 222333678999999999977777778899999876654433221 1234678999999997777767889999997754
Q ss_pred CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC
Q psy6127 381 DKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
. ...........+.+++++|+|..+++...++.|.+|+........... .....+..++++|+|+++++...
T Consensus 182 ~-----~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 182 N-----QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF---TGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp C-----EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC---CSCSCEEEEEECTTCCEEEEEGG
T ss_pred c-----eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc---CCCCCceeEEECCCCCEEEEECC
Confidence 3 111112222567899999999777666678899999986654332111 12234789999999998888888
Q ss_pred CCcEEEEECCCCe
Q psy6127 461 DGQVHIWNAERGY 473 (515)
Q Consensus 461 dg~I~iwd~~~~~ 473 (515)
++.|++++....+
T Consensus 254 ~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 254 NDRVVKLTSLEHH 266 (270)
T ss_dssp GTEEEEECCCGGG
T ss_pred CCEEEEEcCCCcc
Confidence 9999999987543
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-13 Score=142.91 Aligned_cols=273 Identities=12% Similarity=0.093 Sum_probs=196.9
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC--CCeeeEEecCCC
Q psy6127 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH--DNKYVRYFPGHV 307 (515)
Q Consensus 230 spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~--~~~~~~~~~~h~ 307 (515)
+|.+.++++...+++|.++|..+++.+.++... ..+..+.|+|+++++++++ .++.|.+||+. +++.+..+....
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~--~dg~V~viD~~~~t~~~v~~i~~G~ 240 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIG--RDGKVNMIDLWMKEPTTVAEIKIGS 240 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEE--TTSEEEEEETTSSSCCEEEEEECCS
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEc--CCCeEEEEECCCCCCcEeEEEecCC
Confidence 345567777788999999999999999888754 3567899999999988765 69999999995 778777776433
Q ss_pred CCeEEEEEc----CCCCEEEEEeC-CCcEEEEEcCCCCeEEEEecCC------------CeeEEEECCCCCEEEEE-ECC
Q psy6127 308 RKVSSLNLS----PVDDSFISGSY-DKTVRVWDLRQPNNVGMIQLSG------------NKPIAAYDPEGLAFAIG-VNS 369 (515)
Q Consensus 308 ~~v~~l~~~----~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~------------~~~~~~~s~~~~~l~~g-~~d 369 (515)
....++|+ |||+++++++. +++|.++|..+.+.+..+.... .+..+..++++..++.. ..+
T Consensus 241 -~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 241 -EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp -EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred -CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 46799999 69998777665 5999999999999988775321 35667888876665544 456
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeec-cc-cCCCCCEEE
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSG-VL-NNNASPLEA 446 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~-~~-~~~~~i~~~ 446 (515)
|.|.++|...........+ ........+.|+|+|++++++. .++.|.++|+.+++....+.. .. .+...-..
T Consensus 320 g~v~~vd~~~~~~~~v~~i----~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~- 394 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEI----SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN- 394 (567)
T ss_dssp TEEEEEETTCSSEEEEEEE----ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-
T ss_pred CeEEEEecCCCccceeeee----eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-
Confidence 8999999865331111111 1223456889999999988776 578999999999988777654 21 22211112
Q ss_pred EEecCCCEE-EEEe-CCCcEEEEECCC-------CeEEEEEcCCCCCCeEEEEECCCCCEEEEee---------CCEEEE
Q psy6127 447 TFTPDSQFV-ASGS-TDGQVHIWNAER-------GYKVCVLDGDHPSAVQSLQFNPKYHMLASAC---------SNMAFW 508 (515)
Q Consensus 447 ~~sp~g~~l-~sgs-~dg~I~iwd~~~-------~~~~~~~~~~h~~~V~~l~~sp~~~~las~~---------~dv~iW 508 (515)
-++|++..+ +++. .++.|.++|..+ .+.+.++.. ....-..+..+|+++++.... ..+.++
T Consensus 395 ~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~-~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~ 473 (567)
T 1qks_A 395 FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA-LGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVF 473 (567)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-SCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEE
T ss_pred eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec-CCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEE
Confidence 268875544 4443 468999999988 678888875 333334577899999888754 258898
Q ss_pred cCCC
Q psy6127 509 IPTL 512 (515)
Q Consensus 509 ~~~~ 512 (515)
|+..
T Consensus 474 d~~~ 477 (567)
T 1qks_A 474 DIKA 477 (567)
T ss_dssp EGGG
T ss_pred ECCc
Confidence 8763
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.68 E-value=4e-14 Score=133.26 Aligned_cols=236 Identities=8% Similarity=0.037 Sum_probs=181.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCC-CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCC-CC
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKK-YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHV-RK 309 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~-~~ 309 (515)
.+++|++++.|+.|.+||.++|+.+.++..+. ..+.++.+.|+|+.++ + .++.|..||. +++.+..+..+. ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s--~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--S--YSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--E--CBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--e--CCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 45789999999999999999999999998776 5789999999998665 3 4788999999 899998887653 57
Q ss_pred eEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeEEEEecCC-------CeeEEEECCCCCEEEEEECCCcEEEEEeecCC
Q psy6127 310 VSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNVGMIQLSG-------NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
+.++.+.|+|+.+++.+. ++.+..+|. +++.+..+.... ....+++.++|+++++...++.|..||.. ++
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 889999999999999887 778888885 677776664321 23456789999999999999999999987 44
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccC---CCCCEEEEEecCCCEEEEE
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN---NASPLEATFTPDSQFVASG 458 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~---~~~i~~~~~sp~g~~l~sg 458 (515)
. ...+.. . ....++.+.++|+.+++++.++.|..+|..+|+.+..+...... ...+..++..++|.++++.
T Consensus 157 ~--~w~~~~---~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 157 L--LNSVKL---S-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp E--EEEEEC---S-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred E--EEEEEC---C-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 1 111211 1 23446788999999999888889999999999998888643211 1236788888999988877
Q ss_pred eCC--------CcEEEEEC-CCCeEEEEEcC
Q psy6127 459 STD--------GQVHIWNA-ERGYKVCVLDG 480 (515)
Q Consensus 459 s~d--------g~I~iwd~-~~~~~~~~~~~ 480 (515)
... +..+++++ .+|+.+-.+..
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 231 WQGHDREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp ECTTCTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred ccCccccccccCCceEEEECCCCCEEEEecC
Confidence 421 23456666 57888877765
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-13 Score=131.67 Aligned_cols=277 Identities=9% Similarity=-0.047 Sum_probs=188.7
Q ss_pred EEcCCCCEEEEEeC--CC---eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------eCCCeEEEEEC
Q psy6127 228 DYSSDGSLLISCSD--DD---QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------KVDATLRYLSL 294 (515)
Q Consensus 228 ~~spd~~~lasgs~--dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~~d~~v~vwd~ 294 (515)
...|+++++++... .. +|.++|..+++.+.++.....+ .++++|+++.++++.. ..++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34578877777653 22 8899999999998888765544 9999999999988752 13678999999
Q ss_pred CCCeeeEEecCC-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEE-EecCCCeeEEEECCCC-CEE
Q psy6127 295 HDNKYVRYFPGH-------VRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGM-IQLSGNKPIAAYDPEG-LAF 363 (515)
Q Consensus 295 ~~~~~~~~~~~h-------~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~s~~~-~~l 363 (515)
.+.+.+..+.-. ......++|+|||++|+.+.. ++.|.++| .+++.+.. +..... +.+.|++ +.+
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~ 180 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTF 180 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceE
Confidence 998877765321 123558999999999998874 57899999 99998877 655432 4445554 455
Q ss_pred EEEECCCcEEEEEeecCCCCCceee-ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--eeEEeecccc--
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGPFASF-KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN--CVQSLSGVLN-- 438 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~--~~~~~~~~~~-- 438 (515)
++.+.||.+.++|. +++....... ..............+.+++..++..+.++.+.+.|+..+. ....+.....
T Consensus 181 ~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~ 259 (373)
T 2mad_H 181 YLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGR 259 (373)
T ss_pred EEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcc
Confidence 66778999999998 5442100000 0001111112235567766655555578899999987553 2222221100
Q ss_pred -----CCCCCEEEEEecCCCEEEEEeC----------CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee
Q psy6127 439 -----NNASPLEATFTPDSQFVASGST----------DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC 502 (515)
Q Consensus 439 -----~~~~i~~~~~sp~g~~l~sgs~----------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~ 502 (515)
.......++++|+++.++++.. ++.|.++|..+++.+.++.. .....+++|+|||+ .++++.
T Consensus 260 ~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 260 KADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred cccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEc
Confidence 1112344789999998887653 35799999999999999974 34688999999999 666654
Q ss_pred ---CCEEEEcCCCC
Q psy6127 503 ---SNMAFWIPTLS 513 (515)
Q Consensus 503 ---~dv~iW~~~~~ 513 (515)
+++.+||....
T Consensus 338 ~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 338 AGTEVLHIYDAGAG 351 (373)
T ss_pred CCCCeEEEEECCCC
Confidence 44899987653
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=8.8e-14 Score=135.19 Aligned_cols=280 Identities=11% Similarity=0.056 Sum_probs=194.1
Q ss_pred EEEcCCCCEEEEEeC-----CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------eCCCeEEEEE
Q psy6127 227 LDYSSDGSLLISCSD-----DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------KVDATLRYLS 293 (515)
Q Consensus 227 l~~spd~~~lasgs~-----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~~d~~v~vwd 293 (515)
....|+++.++.... ++.|.+.|..+++.+.++.....+ . ++++|+++.++++.. ..++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 446789998888875 689999999999999999866665 4 999999999988762 2367899999
Q ss_pred CCCCeeeEEecCC-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEE
Q psy6127 294 LHDNKYVRYFPGH-------VRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 294 ~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 364 (515)
..+++.+..+.-. ......++|+|||++++.+.. ++.|.++|+.+++.+..+...+. ...+....+.++
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFF 193 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeE
Confidence 9999988776421 124567999999999888864 68999999999999998866542 222333445666
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCe-EEEEEc-CCCCEEEEEECCCcEEEEECCCCc--eeEEeeccc---
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW-TGLKFS-PDGKLILVSTNGSIIRLFDAFNGN--CVQSLSGVL--- 437 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i-~~l~~s-p~~~~l~~~s~dg~i~iwd~~~~~--~~~~~~~~~--- 437 (515)
+.+.||.+.+.++...................++ ....|. ++|++++ .+.+|.+++.|..++. ....+....
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccc
Confidence 7777888888887652221100001111111122 124664 6776555 5668999999987654 333332000
Q ss_pred ----cCCCCCEEEEEecCCCEEEEEeC----------CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee
Q psy6127 438 ----NNNASPLEATFTPDSQFVASGST----------DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC 502 (515)
Q Consensus 438 ----~~~~~i~~~~~sp~g~~l~sgs~----------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~ 502 (515)
-.......++++|+++.++.... .+.|.+.|+.+++.+..+.. ...+++++++||++ +|.++.
T Consensus 273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v--g~~~~~lavs~D~~~~ly~tn 350 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALS 350 (386)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECSSSSCEEEEEE
T ss_pred ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC--CCCcceEEECCCCCeEEEEEc
Confidence 01112445788999998887643 25799999999999999875 34788999999997 665543
Q ss_pred ---CCEEEEcCCCC
Q psy6127 503 ---SNMAFWIPTLS 513 (515)
Q Consensus 503 ---~dv~iW~~~~~ 513 (515)
+++.++|....
T Consensus 351 ~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 351 TGDKTLYIHDAESG 364 (386)
T ss_dssp TTTTEEEEEETTTC
T ss_pred CCCCeEEEEECCCC
Confidence 45999987653
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-13 Score=131.74 Aligned_cols=246 Identities=10% Similarity=0.105 Sum_probs=170.3
Q ss_pred ccCCcEEEEEEcCCCCEEEE-------EeCCCeEEEEECCCCeeeeEec----CCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 219 ENTDKINSLDYSSDGSLLIS-------CSDDDQIIIYDCEQGTSKNTIN----SKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~las-------gs~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
+.-....+++|+++|+++++ +..++.|.+||..+++...... ++...+..+++.+++..+++++ ..+
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~--~~~ 92 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD--MRL 92 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE--TTT
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE--CCC
Confidence 33456789999999988877 5678999999988776543222 2446788999999844555554 355
Q ss_pred eEEEEECCCCeeeEE-ecC----CCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEEcCCCCeEEEEec
Q psy6127 288 TLRYLSLHDNKYVRY-FPG----HVRKVSSLNLSPVDDSFISGSYD---------------KTVRVWDLRQPNNVGMIQL 347 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~-~~~----h~~~v~~l~~~~~~~~l~s~s~d---------------g~i~iwd~~~~~~~~~~~~ 347 (515)
.|.+||.+ ++.... ... ....+.++++.++|+..++...+ +.|..||.. ++.......
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 89999988 665433 221 12458899999999887776655 567777766 555444433
Q ss_pred CCCeeEEEEC----CCCCEEEEE-ECCCcEEEEEeec-CCCCCceeeecCCCCC-cCeEEEEEcCCCCEEEEEECCCcEE
Q psy6127 348 SGNKPIAAYD----PEGLAFAIG-VNSDSIKLYDVRS-YDKGPFASFKCPGERG-CEWTGLKFSPDGKLILVSTNGSIIR 420 (515)
Q Consensus 348 ~~~~~~~~~s----~~~~~l~~g-~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~-~~i~~l~~sp~~~~l~~~s~dg~i~ 420 (515)
......++++ |+++.++++ ..++.|.+||... +.............+. ..+..++++++|+..++...++.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 3446788999 999766555 4678999999873 2111111122222222 4567899999999888877888999
Q ss_pred EEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE-eCCCcEEEEECCC
Q psy6127 421 LFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG-STDGQVHIWNAER 471 (515)
Q Consensus 421 iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg-s~dg~I~iwd~~~ 471 (515)
+||..+++....+..+. ..+.+++|+|+|+.|+.+ ..++.|..|++..
T Consensus 251 ~~d~~~g~~~~~~~~~~---~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPF---EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBSCSEEEECSS---SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCCcEeEEEeCCC---CCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99988777666665432 348899999999955554 4567899999864
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-12 Score=122.92 Aligned_cols=275 Identities=11% Similarity=0.043 Sum_probs=191.5
Q ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeee-EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC
Q psy6127 218 RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN-TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~ 296 (515)
......+.+++++++|+..++...++.|.+||.. ++... .+......+..+++.+++.. +++. ..++.|..+|..
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~-~~~~~v~~~d~~- 91 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDI-WFTE-NGANKIGKLSKK- 91 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCE-EEEE-TTTTEEEEECTT-
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCE-EEEe-cCCCeEEEECCC-
Confidence 3456788999999999988877778999999987 55433 22333467889999988864 3333 347889999988
Q ss_pred CeeeE-EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-e-cCCCeeEEEECCCCCEEEEEECCCcEE
Q psy6127 297 NKYVR-YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-Q-LSGNKPIAAYDPEGLAFAIGVNSDSIK 373 (515)
Q Consensus 297 ~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-~~~~~~~~~~s~~~~~l~~g~~dg~i~ 373 (515)
++... ........+.++++.++++.+++...++.|..+|.. ++..... . ....+..++++++++..++...++.|.
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 55432 233344678999999999988877778899999987 5544322 2 234578899999999776666678899
Q ss_pred EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 374 LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
.||. .+.. ..... ......+.+++++++|+..++....+.|.+||. +++.... ... .....+..++++++|+
T Consensus 171 ~~~~-~g~~---~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~-~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 171 RITN-TGKL---EEYPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY-DIP-TPNARPHAITAGKNSE 242 (300)
T ss_dssp EECT-TCCE---EEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECS-STTCCEEEEEECSTTC
T ss_pred EECC-CCcE---EEeeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE-ECC-CCCCCceEEEECCCCC
Confidence 9987 3221 12221 223346789999999987766666778999998 5554332 111 1233478999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEE-EcCCCCCCeEEEEECCCCCEEEEeeCCEEEEc
Q psy6127 454 FVASGSTDGQVHIWNAERGYKVCV-LDGDHPSAVQSLQFNPKYHMLASACSNMAFWI 509 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~~~~~~~~-~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~ 509 (515)
+.++...++.|..||. +++.... +.. ....+.+++++++|.+.++.. . .|+.
T Consensus 243 l~v~~~~~~~i~~~~~-~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~-~-~i~~ 295 (300)
T 2qc5_A 243 IWFTEWGANQIGRITN-DNTIQEYQLQT-ENAEPHGITFGKDGSVWFALK-C-KIGK 295 (300)
T ss_dssp EEEEETTTTEEEEECT-TSCEEEEECCS-TTCCCCCEEECTTSCEEEECS-S-EEEE
T ss_pred EEEeccCCCeEEEECC-CCcEEEEECCc-cCCccceeEeCCCCCEEEEcc-C-ceEE
Confidence 7776666789999998 4544332 332 456688999999999777765 4 4443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.2e-14 Score=133.10 Aligned_cols=211 Identities=11% Similarity=0.099 Sum_probs=163.9
Q ss_pred EEeeCCCeEEEEECCCCeeeEEecCCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC--CCeeEEEEC
Q psy6127 281 ASTKVDATLRYLSLHDNKYVRYFPGHV-RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS--GNKPIAAYD 357 (515)
Q Consensus 281 ~s~~~d~~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~s 357 (515)
++++.++.|++||.++++.+.++..+. ..+.++.+.|+|+.++ +.++.|..||. +++.+..+... ..+.++.+.
T Consensus 9 v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~ 85 (276)
T 3no2_A 9 VGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARIL 85 (276)
T ss_dssp EECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEEC
T ss_pred EeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEEC
Confidence 344689999999999999999998776 5789999999999888 45788999999 89888888664 356788999
Q ss_pred CCCCEEEEEEC-CCcEEEEEeecCCCCCceeeecCC---CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEe
Q psy6127 358 PEGLAFAIGVN-SDSIKLYDVRSYDKGPFASFKCPG---ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 358 ~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~~~~---~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~ 433 (515)
|+|+.+++.+. ++.+..+|.. ++ ....+.... .+......+++.++|+++++...++.|..||.. |+.+..+
T Consensus 86 ~dG~~lv~~~~~~~~v~~vd~~-Gk--~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~ 161 (276)
T 3no2_A 86 PDGNALVAWCGHPSTILEVNMK-GE--VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSV 161 (276)
T ss_dssp TTSCEEEEEESTTEEEEEECTT-SC--EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CCCCEEEEecCCCCEEEEEeCC-CC--EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEE
Confidence 99999999887 6667666642 22 111222111 111234466789999999999999999999987 9988888
Q ss_pred eccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC-----CCCCeEEEEECCCCCEEEEee
Q psy6127 434 SGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-----HPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 434 ~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-----h~~~V~~l~~sp~~~~las~~ 502 (515)
... ..+..+...++|+++++++.++.|..+|..+|+.+.++... ....+..++..++|.++++..
T Consensus 162 ~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 162 KLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp ECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred ECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 753 22567888999999999988889999999999999888631 123378999999999988874
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.64 E-value=6.1e-14 Score=131.38 Aligned_cols=237 Identities=9% Similarity=0.012 Sum_probs=161.4
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM 344 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 344 (515)
...++++.+++. +++++...++.|.+||..++........+...+.++++.++++.+++.. ++.|.+||.........
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 678899999987 4441324688999999866554332233445688999999998666555 88999999876654322
Q ss_pred E-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 345 I-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 345 ~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
. .....+..++++++|+.+++...++.|.+|+..+.. ...........+.+++++|+|+.+++...++.|.+||
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT-----QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS-----CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce-----eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 1 122457889999999988777778899999654322 1111112223456899999998776666778999999
Q ss_pred CCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 424 AFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
............ ....+..++++++|.++++...++.|.+|+........ ....+...+.+++++|+|+++++..+
T Consensus 178 ~~~~~~~~~~~~---~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 178 AESNNQVVLPFT---DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp TTTCCEEECCCS---SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred cCCCceEeeccc---CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccCCCCCceeEEECCCCCEEEEECC
Confidence 877654332221 12347899999999877777778899999987654433 32224467899999999998777665
Q ss_pred C--EEEEcCCC
Q psy6127 504 N--MAFWIPTL 512 (515)
Q Consensus 504 d--v~iW~~~~ 512 (515)
+ +++++++.
T Consensus 254 ~~~v~~~~~~~ 264 (270)
T 1rwi_B 254 NDRVVKLTSLE 264 (270)
T ss_dssp GTEEEEECCCG
T ss_pred CCEEEEEcCCC
Confidence 4 77777654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-14 Score=154.05 Aligned_cols=271 Identities=9% Similarity=0.013 Sum_probs=174.3
Q ss_pred cCCCCEEEEEeCCC---e--EEEEECCCCeeeeEec------CCCCceeEEEEecCCCeEEEEEe---eCCCeEEEEECC
Q psy6127 230 SSDGSLLISCSDDD---Q--IIIYDCEQGTSKNTIN------SKKYGVDLIKFTHSKTTAIHAST---KVDATLRYLSLH 295 (515)
Q Consensus 230 spd~~~lasgs~dg---~--i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~s~---~~d~~v~vwd~~ 295 (515)
+|+|++++....++ . +.+.+...++....+. +|...+..++|+|||+.+++... +.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 36777776665443 2 3334444444333222 34457899999999999887753 234689999999
Q ss_pred CCeeeEEecCCCCCe--EEEEEcCCCCEEEEEeCCCc-------------EEEEEcCCCCe--EEEEec---CCCeeEEE
Q psy6127 296 DNKYVRYFPGHVRKV--SSLNLSPVDDSFISGSYDKT-------------VRVWDLRQPNN--VGMIQL---SGNKPIAA 355 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v--~~l~~~~~~~~l~s~s~dg~-------------i~iwd~~~~~~--~~~~~~---~~~~~~~~ 355 (515)
+++.+. ..+...+ ..++|+|||+.|+.++.|.. |++|++.++.. ...+.. ...+..+.
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 988651 1122222 68999999999999998876 99999998763 233322 23467899
Q ss_pred ECCCCCEEEEEECCC----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC----CCcEEEEECCCC
Q psy6127 356 YDPEGLAFAIGVNSD----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN----GSIIRLFDAFNG 427 (515)
Q Consensus 356 ~s~~~~~l~~g~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~----dg~i~iwd~~~~ 427 (515)
|+|||++++.++.++ .|.+++..+. ....+.. +...+....+ |+|. ++..+. ++.|.+||+.++
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~---~~~~l~~---~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEK---DFRLLVK---GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCS---SCEEEEE---CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCC---ceEEeec---CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 999999998877665 4555543222 1222221 2223345555 5666 555443 578999999877
Q ss_pred ce--eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC-CCeEEEEEcCCCCCCeEEEEECCCCCEEEEee--
Q psy6127 428 NC--VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE-RGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-- 502 (515)
Q Consensus 428 ~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-- 502 (515)
.. ...+..+. ....+..++|+ ++.++++...|+..++|.+. +++....+...+.+.|..++++|++..++...
T Consensus 306 ~~~~~~~l~~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 383 (695)
T 2bkl_A 306 ARASWKEIVPED-SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTS 383 (695)
T ss_dssp SGGGCEEEECCC-SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEE
T ss_pred CccCCeEEecCC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 53 23333222 12236778888 67788888899988887654 46666666552367788899999987666332
Q ss_pred ----CCEEEEcCCC
Q psy6127 503 ----SNMAFWIPTL 512 (515)
Q Consensus 503 ----~dv~iW~~~~ 512 (515)
+.+.+|++..
T Consensus 384 ~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 384 FTTPRQIYKTSVST 397 (695)
T ss_dssp TTEEEEEEEEETTT
T ss_pred CCCCCEEEEEECCC
Confidence 2377787754
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-13 Score=136.64 Aligned_cols=268 Identities=12% Similarity=0.088 Sum_probs=191.4
Q ss_pred cEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeeeeEecCC------
Q psy6127 199 TITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSK------ 262 (515)
Q Consensus 199 ~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~------ 262 (515)
..+.+.| ..+++.+.++..-..+ .++++|||++|+++. .++.|.++|..+++.+.++...
T Consensus 99 ~~VsVID--~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~ 174 (426)
T 3c75_H 99 TQQFVID--GSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEE--TTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CeEEEEE--CCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc
Confidence 4566666 5667777777655556 899999999988876 3678999999999998887532
Q ss_pred -CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCC
Q psy6127 263 -KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD-DSFISGSYDKTVRVWDLRQPN 340 (515)
Q Consensus 263 -~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i~iwd~~~~~ 340 (515)
......+.|+|++++++++....++.|.+.|..+++.+.++.-.. . ....|++ ..+++.+.||.+.+.+..+++
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 234567899999999988763236899999999999988776321 1 2334443 566777788888888886665
Q ss_pred eEEEE----ecCCC--eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC-------CCcCeEEEEEcCCC
Q psy6127 341 NVGMI----QLSGN--KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE-------RGCEWTGLKFSPDG 407 (515)
Q Consensus 341 ~~~~~----~~~~~--~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~-------~~~~i~~l~~sp~~ 407 (515)
..... ..... ...+.+.+++..++..+..+.+.+.|................. .......++++|++
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg 330 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS 330 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC
Confidence 54321 11111 1235679999988888888999999986532111111111000 00111237899999
Q ss_pred CEEEEEEC----------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-EEEEEe-CCCcEEEEECCCCeEE
Q psy6127 408 KLILVSTN----------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASGS-TDGQVHIWNAERGYKV 475 (515)
Q Consensus 408 ~~l~~~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs-~dg~I~iwd~~~~~~~ 475 (515)
+++++... ++.|.++|..+.+.+..+..... ...++|+|||+ ++++.. .++.|.++|..+++.+
T Consensus 331 ~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~----P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 331 DRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE----IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE----ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC----cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 98877642 35799999999999998875432 67999999999 888887 5899999999999999
Q ss_pred EEE
Q psy6127 476 CVL 478 (515)
Q Consensus 476 ~~~ 478 (515)
.++
T Consensus 407 ~tI 409 (426)
T 3c75_H 407 RSV 409 (426)
T ss_dssp EEE
T ss_pred EEe
Confidence 997
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.61 E-value=7e-14 Score=150.72 Aligned_cols=247 Identities=12% Similarity=0.070 Sum_probs=163.8
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC--------
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDD-----DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV-------- 285 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~-------- 285 (515)
+|...+..++|||||++||.++.+ .+|++||+.+++.+.. ..+...+..++|+|| +.+++++...
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 455578899999999999988754 4699999999887543 112222357899999 8888876321
Q ss_pred ----CCeEEEEECCCCee--eEEe--cCCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCC--C-eEEEEecCC
Q psy6127 286 ----DATLRYLSLHDNKY--VRYF--PGHVRKVSSLNLSPVDDSFISGSYDK-----TVRVWDLRQP--N-NVGMIQLSG 349 (515)
Q Consensus 286 ----d~~v~vwd~~~~~~--~~~~--~~h~~~v~~l~~~~~~~~l~s~s~dg-----~i~iwd~~~~--~-~~~~~~~~~ 349 (515)
...|++|++.++.. ...+ ..+...+..+.|+|||++|+..+.++ .|.+||+.++ + .........
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 22499999977652 2233 33444689999999999888877544 8999999887 4 333333333
Q ss_pred CeeEEEECCCCCEEEEEECC----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy6127 350 NKPIAAYDPEGLAFAIGVNS----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF 425 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~ 425 (515)
..... ++|+|+.|+..+.+ +.|.+||+.+.. .....+. ..+...+..++++ ++..+++...|+..++|.+.
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~--~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVV--PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEE--CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEe--cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 33333 45899999888764 458899987632 1111222 2334456677887 55677778888887777554
Q ss_pred -CCceeEEeeccccCCCCCEEEEEecCCCEEEEE----eCCCcEEEEECCCCeE
Q psy6127 426 -NGNCVQSLSGVLNNNASPLEATFTPDSQFVASG----STDGQVHIWNAERGYK 474 (515)
Q Consensus 426 -~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg----s~dg~I~iwd~~~~~~ 474 (515)
+++....+... ....+..+.++|+++.++.. ...++|++||+.+++.
T Consensus 393 ~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 393 LDGKPAGAVSLP--GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp TTSCEEEECBCS--SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCCCceeeccCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 45555555431 23347788999998765532 2347899999988873
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.2e-13 Score=144.58 Aligned_cols=273 Identities=10% Similarity=0.057 Sum_probs=173.3
Q ss_pred cCCCCEEEEEeCCCe---EEEEEC--C---CCeeeeEe------cCCCCceeEEEEecCCCeEEEEEeeCC----CeEEE
Q psy6127 230 SSDGSLLISCSDDDQ---IIIYDC--E---QGTSKNTI------NSKKYGVDLIKFTHSKTTAIHASTKVD----ATLRY 291 (515)
Q Consensus 230 spd~~~lasgs~dg~---i~iwd~--~---~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~s~~~d----~~v~v 291 (515)
+|||++++....++. -.+|.. . .++....+ .++...+..++|+|||+.+++++. .+ ..|++
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~-~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQ-DGGSDWRTVKF 193 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEE-ETTCSEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEc-CCCCceEEEEE
Confidence 378888776664432 445543 3 33322221 123346889999999999988763 22 36999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCc--------------EEEEEcCCCCe--EEEEecCC---Cee
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKT--------------VRVWDLRQPNN--VGMIQLSG---NKP 352 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~--------------i~iwd~~~~~~--~~~~~~~~---~~~ 352 (515)
||+.+++.+... .+...+..++|+|| +.|+.++.|+. |++|++.++.. ...+.... ...
T Consensus 194 ~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 194 VGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp EETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred EECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 999999876532 12222357899999 98888887654 89999987763 23332222 367
Q ss_pred EEEECCCCCEEEEEECCC-----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC----CcEEEEE
Q psy6127 353 IAAYDPEGLAFAIGVNSD-----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG----SIIRLFD 423 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d----g~i~iwd 423 (515)
.+.|+|||++++..+.++ .|.+||+.++.......+.. +....... ++|+|+.|+..+.+ +.|.+||
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~---~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP---DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC---SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC---CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 899999999998877544 89999998752110122221 12223333 34899988888764 4599999
Q ss_pred CCCCc-eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC-CCeEEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 424 AFNGN-CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE-RGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 424 ~~~~~-~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
+.++. ....+..+. ...+..++++ ++.++++...|+..+||.+. +++....+...+.+.|..++++|++..++..
T Consensus 348 ~~~~~~~~~~l~~~~--~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 348 LSGSTPRFDTVVPES--KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLS 424 (741)
T ss_dssp CSSSSCEEEEEECCC--SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEE
T ss_pred CCCCccccEEEecCC--CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEE
Confidence 88752 333333222 2225667777 56778888889887777554 4666666654246779999999988755532
Q ss_pred --e----CCEEEEcCCC
Q psy6127 502 --C----SNMAFWIPTL 512 (515)
Q Consensus 502 --~----~dv~iW~~~~ 512 (515)
+ +.+.+|++..
T Consensus 425 ~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 425 FSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEETTEEEEEEEEETTT
T ss_pred EcCCCCCCEEEEEECCC
Confidence 2 2377777654
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=3e-11 Score=114.46 Aligned_cols=261 Identities=10% Similarity=0.041 Sum_probs=173.2
Q ss_pred CCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-eEecCCCCceeEEEEecC
Q psy6127 196 SSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-NTINSKKYGVDLIKFTHS 274 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~ 274 (515)
..+..+..++.. ..... ..+..+...+.+++++++|++.++...++.|..||.. ++.. ..+......+..+++.++
T Consensus 33 ~~~~~v~~~d~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~ 109 (299)
T 2z2n_A 33 HKANMISCINLD-GKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPN 109 (299)
T ss_dssp TTTTEEEEECTT-CCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCCCcEEEEcCC-CCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCC
Confidence 334456666633 22211 1223356789999999999988877778899999986 4332 222234567889999998
Q ss_pred CCeEEEEEeeCCCeEEEEECCCCeeeE-EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-e-cCCCe
Q psy6127 275 KTTAIHASTKVDATLRYLSLHDNKYVR-YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-Q-LSGNK 351 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-~~~~~ 351 (515)
+.. +++. ..++.|..||. +++... ....+...+..+++.++++..++...++.|..||. +++..... . ....+
T Consensus 110 g~l-~v~~-~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 110 GDI-WFTE-MNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP 185 (299)
T ss_dssp SCE-EEEE-TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCE-EEEe-cCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence 854 3333 35789999998 554433 23335567899999999988777777789999998 66654431 1 22347
Q ss_pred eEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE
Q psy6127 352 PIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ 431 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~ 431 (515)
..++++++|++.++...++.|..||. ++. ...... ......+.+++++++|+..++...++.|..||. +++ ..
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~---~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~ 258 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITT-SGE---ITEFKI-PTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IE 258 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCC---EEEEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EE
T ss_pred eeEEECCCCCEEEEccCCceEEEECC-CCc---EEEEEC-CCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eE
Confidence 78999999997777666889999998 433 112222 223456789999999986665557789999998 454 33
Q ss_pred EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy6127 432 SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 432 ~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
.+... .....+.++++ ++|.+.++.. .+.+..++.++++
T Consensus 259 ~~~~~-~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 259 EYPIQ-IKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEECS-SSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred EEeCC-CCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 33221 22344789999 8888777654 5667778876653
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-12 Score=130.06 Aligned_cols=275 Identities=12% Similarity=0.036 Sum_probs=190.1
Q ss_pred CCCCEEEEEeCC-----CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------eCCCeEEEEECCCC
Q psy6127 231 SDGSLLISCSDD-----DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------KVDATLRYLSLHDN 297 (515)
Q Consensus 231 pd~~~lasgs~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~~d~~v~vwd~~~~ 297 (515)
|+++.+++.... +.|.++|..+++.+.++.....+ .++++|+++.++++.. ..++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 467766666542 69999999999999999876666 8999999999988862 14678999999999
Q ss_pred eeeEEecCC-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCC-CEEEEEE
Q psy6127 298 KYVRYFPGH-------VRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG-LAFAIGV 367 (515)
Q Consensus 298 ~~~~~~~~h-------~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~ 367 (515)
+.+..+.-. ......+.|+|||++++.+.. ++.|.+.|+.+++.+..+...+. ....|++ ..+++.+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNC 236 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEc
Confidence 988776421 133567899999999998874 57899999999999988876542 2233332 4556666
Q ss_pred CCCcEEEEEeecCCCCCceeeecCCCCCcC-eEEEEEcCCCCEEEEEECCCcEEEEECCCCcee--EEeeccc-------
Q psy6127 368 NSDSIKLYDVRSYDKGPFASFKCPGERGCE-WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV--QSLSGVL------- 437 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~--~~~~~~~------- 437 (515)
.||.+.+.+...++.. ............+ ...+.+++++..++..+..+.+.+.|....... ..+....
T Consensus 237 ~dG~~~~V~~~~~~v~-~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 237 RDGSLARVDFADGETK-VTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp TTSSEEEEECCTTCCE-EEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred CCCCEEEEECCCCcEE-EEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence 7777777777332211 0000000111111 124678999988887788899999998655421 1111000
Q ss_pred cCCCCCEEEEEecCCCEEEEEeC----------CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee---C
Q psy6127 438 NNNASPLEATFTPDSQFVASGST----------DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC---S 503 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~----------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~---~ 503 (515)
........++++|+++.+++... ++.|.++|..+++.+.++.. ....++++|+||++ +++++. +
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTT
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCC
Confidence 00111234789999988777642 35799999999999999975 23588999999998 777765 3
Q ss_pred CEEEEcCCCC
Q psy6127 504 NMAFWIPTLS 513 (515)
Q Consensus 504 dv~iW~~~~~ 513 (515)
++.++|....
T Consensus 394 ~VsVID~~t~ 403 (426)
T 3c75_H 394 TLHIYDAATG 403 (426)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEECCCC
Confidence 4999997653
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.56 E-value=6.7e-12 Score=119.47 Aligned_cols=234 Identities=12% Similarity=0.065 Sum_probs=158.3
Q ss_pred cccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC
Q psy6127 218 RENTDKINSLDYSSDG-SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~ 296 (515)
..+..---+..|+|++ .++++...++.|..||..+++. ..+. ....+.+++++++++ ++++. ++.|.+||.++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~-l~v~~---~~~l~~~d~~~ 82 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG-YVATI---GTKFCALNWKE 82 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS-EEEEE---TTEEEEEETTT
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC-EEEEE---CCeEEEEECCC
Confidence 3444556688899954 5566666789999999987765 3333 346799999999998 44443 67899999988
Q ss_pred CeeeEEecC----CCCCeEEEEEcCCCCEEEEEeCC---------CcEEEEEcCC-CCeEEEEecCCCeeEEEECCCCCE
Q psy6127 297 NKYVRYFPG----HVRKVSSLNLSPVDDSFISGSYD---------KTVRVWDLRQ-PNNVGMIQLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 297 ~~~~~~~~~----h~~~v~~l~~~~~~~~l~s~s~d---------g~i~iwd~~~-~~~~~~~~~~~~~~~~~~s~~~~~ 362 (515)
++....... ....+..++++|+|+++++...+ ..-.+|.+.. ++.............++|+|+++.
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCE
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCE
Confidence 875433221 22458899999999966654321 2345555543 333333333344678999999987
Q ss_pred EEEE-ECCCcEEEEEee--cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccC
Q psy6127 363 FAIG-VNSDSIKLYDVR--SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN 439 (515)
Q Consensus 363 l~~g-~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~ 439 (515)
++.+ +.++.|..|++. ++.......+............++++++|++.++...++.|..||..+++.+..+....
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~-- 240 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV-- 240 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS--
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC--
Confidence 7554 457889999984 22211011122222223456789999999887777788899999999899888877543
Q ss_pred CCCCEEEEEe-cCCCEEEEEeC
Q psy6127 440 NASPLEATFT-PDSQFVASGST 460 (515)
Q Consensus 440 ~~~i~~~~~s-p~g~~l~sgs~ 460 (515)
..+++++|. |+++.|+.++.
T Consensus 241 -~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 241 -DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -SBEEEEEEESGGGCEEEEEEB
T ss_pred -CCceEEEEeCCCCCEEEEEcC
Confidence 238999998 88887766654
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.56 E-value=9.7e-12 Score=118.39 Aligned_cols=231 Identities=13% Similarity=0.112 Sum_probs=158.8
Q ss_pred CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC
Q psy6127 261 SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN 340 (515)
Q Consensus 261 ~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~ 340 (515)
....-..+..|++++..++.+. ..++.|..||..+++.. .+. ....+.+++++|+|+++++ . ++.|.+||.++++
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d-~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVD-IPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEE-TTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred cCCccccCCeEECCCCEEEEEE-CCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 3344566889999888777765 46899999999887653 332 4567999999999995554 3 5789999998876
Q ss_pred eEEEEecC-----CCeeEEEECCCCCEEEEEECC---------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC
Q psy6127 341 NVGMIQLS-----GNKPIAAYDPEGLAFAIGVNS---------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD 406 (515)
Q Consensus 341 ~~~~~~~~-----~~~~~~~~s~~~~~l~~g~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~ 406 (515)
........ ..+..++++|+|+++++.... ..-.+|.+..... ..... ........++|+|+
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--~~~~~---~~~~~pngi~~spd 159 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH--VKKYF---DQVDISNGLDWSLD 159 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC--EEEEE---EEESBEEEEEECTT
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC--EEEEe---eccccccceEEcCC
Confidence 54433321 235679999999977654322 3346666654211 11111 11224568999999
Q ss_pred CCEEEEE-ECCCcEEEEEC--CCCcee--EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC
Q psy6127 407 GKLILVS-TNGSIIRLFDA--FNGNCV--QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD 481 (515)
Q Consensus 407 ~~~l~~~-s~dg~i~iwd~--~~~~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 481 (515)
++.++.+ +.++.|.+|++ .++... +.+.........+..++++++|++.++...++.|..||..+|+.+..+..
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~- 238 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL- 238 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC-
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC-
Confidence 9977655 45788999987 455432 22222111223368899999998888877788999999999999988876
Q ss_pred CCCCeEEEEEC-CCCCEEEEee
Q psy6127 482 HPSAVQSLQFN-PKYHMLASAC 502 (515)
Q Consensus 482 h~~~V~~l~~s-p~~~~las~~ 502 (515)
+...+++++|. |+++.|..++
T Consensus 239 p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 239 PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp SSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCceEEEEeCCCCCEEEEEc
Confidence 66789999998 7877655443
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.9e-12 Score=129.03 Aligned_cols=242 Identities=10% Similarity=0.093 Sum_probs=166.4
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
-.....++|+|+++++++...++.|++||..++........... .. ++|+++++.++++.......|.+++..++...
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 34688999999999888777789999999988777655554333 33 99999999877765211228999998766544
Q ss_pred EEe----cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE----EecCCCe--e-EEEECCC-CCEEEEEEC
Q psy6127 301 RYF----PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM----IQLSGNK--P-IAAYDPE-GLAFAIGVN 368 (515)
Q Consensus 301 ~~~----~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~----~~~~~~~--~-~~~~s~~-~~~l~~g~~ 368 (515)
..+ ......+.+++++|++..|+.+..++.|+.||..++..... ....... . .++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 333 22456788999999666666677789999999988764332 1111111 2 8999995 555555566
Q ss_pred CCcEEEEEeecCCCCCceeeecCC------------CCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeec
Q psy6127 369 SDSIKLYDVRSYDKGPFASFKCPG------------ERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 369 dg~i~i~d~~~~~~~~~~~~~~~~------------~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~ 435 (515)
++.|+.|+.... ...+.... ..-.....++++|+|+++++-+ .++.|+.|+..++.. ..+.+
T Consensus 288 ~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 288 LSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp TTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred CCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 788999886532 11111110 0123467999999999777766 788999999877764 33433
Q ss_pred ccc------------CCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 436 VLN------------NNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 436 ~~~------------~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
... .-..+..++++|+|.++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 210 0124789999999888887778888888765
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-12 Score=127.55 Aligned_cols=257 Identities=11% Similarity=0.022 Sum_probs=169.5
Q ss_pred CcEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeeeeEec-------CCCCceeEEEEecCCCeEEEEEeeC----CCe
Q psy6127 222 DKINSLDYSSDGSLLISCS--DDDQIIIYDCEQGTSKNTIN-------SKKYGVDLIKFTHSKTTAIHASTKV----DAT 288 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs--~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~~~----d~~ 288 (515)
..+..++++|+|+++++.. .++.++||.+.+++.. .+. .+-..+..+++.+++. ++++.... ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCe
Confidence 6889999999999988864 2343566655455432 221 2346789999999975 44443221 578
Q ss_pred EEEEECCCCeeeEEecC------CCCCeEEEEEcCCCCEE-EEEe---CCCcEEEEEcCCCCeEEEEecCCCe--eEEEE
Q psy6127 289 LRYLSLHDNKYVRYFPG------HVRKVSSLNLSPVDDSF-ISGS---YDKTVRVWDLRQPNNVGMIQLSGNK--PIAAY 356 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~l-~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~ 356 (515)
|.+||+.+++.+..+.. +...+..++++|++..+ ++-. .++.|.+||+.+++....+..+... ....+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99999999987766542 22456899999875554 4444 5789999999988876655321111 01334
Q ss_pred CCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC-cEEEEECC---CCc----
Q psy6127 357 DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-IIRLFDAF---NGN---- 428 (515)
Q Consensus 357 s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg-~i~iwd~~---~~~---- 428 (515)
.++|..+.+.+.++.++.|. ..+..++|+|+|+.|+++..++ .+..++.. .+.
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~-------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPH-------------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp EETTEECBEECTTSCEECCC-------------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHH
T ss_pred eECCEEEEeccCCCceecee-------------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChh
Confidence 45666666666666664432 1346899999999998887765 44444421 111
Q ss_pred -eeE--EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 429 -CVQ--SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 429 -~~~--~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
... ...+.. ..+..++++++|.++++...++.|.+||..+++........+...+++++|.+++.++++.+
T Consensus 236 ~~~~~~~~~g~~---g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 236 ELGSKIERYSEK---PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp HHHTTCEEEEEC---CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred hhhcceEecccC---CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 000 111111 13567999999999998888999999998667654444322345689999999998887765
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-12 Score=122.38 Aligned_cols=241 Identities=10% Similarity=0.052 Sum_probs=159.3
Q ss_pred CCCceeEEEEecCCCeEEEE-----EeeCCCeEEEEECCCCeeeEEec----CCCCCeEEEEEcCC-CCEEEEEeCCCcE
Q psy6127 262 KKYGVDLIKFTHSKTTAIHA-----STKVDATLRYLSLHDNKYVRYFP----GHVRKVSSLNLSPV-DDSFISGSYDKTV 331 (515)
Q Consensus 262 ~~~~v~~~~~~~~~~~l~~~-----s~~~d~~v~vwd~~~~~~~~~~~----~h~~~v~~l~~~~~-~~~l~s~s~dg~i 331 (515)
.-....+++|.+++...+.. .+..++.|.+||..+++...... ++...+.+++++++ +++++ ++.++.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCE
Confidence 33456889999888644440 02258899999988877643322 25567999999999 65444 4445579
Q ss_pred EEEEcCCCCeEEE-Eec-----CCCeeEEEECCCCCEEEEEECC---------------CcEEEEEeecCCCCCceeeec
Q psy6127 332 RVWDLRQPNNVGM-IQL-----SGNKPIAAYDPEGLAFAIGVNS---------------DSIKLYDVRSYDKGPFASFKC 390 (515)
Q Consensus 332 ~iwd~~~~~~~~~-~~~-----~~~~~~~~~s~~~~~l~~g~~d---------------g~i~i~d~~~~~~~~~~~~~~ 390 (515)
.+||.. ++.... ... ...+..++++++|+++++...+ +.|..||.. ++ .....
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~~~~- 168 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ---MIQVD- 168 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC---EEEEE-
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC---EEEec-
Confidence 999998 665433 211 1236789999999888776554 455555543 11 11111
Q ss_pred CCCCCcCeEEEEEc----CCCCEEEEEE-CCCcEEEEECC-CCcee--EEeeccccCC-CCCEEEEEecCCCEEEEEeCC
Q psy6127 391 PGERGCEWTGLKFS----PDGKLILVST-NGSIIRLFDAF-NGNCV--QSLSGVLNNN-ASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 391 ~~~~~~~i~~l~~s----p~~~~l~~~s-~dg~i~iwd~~-~~~~~--~~~~~~~~~~-~~i~~~~~sp~g~~l~sgs~d 461 (515)
........++|+ |+++.++++. .++.|.+||.. +++.. ..+....... ..+..++++++|+++++...+
T Consensus 169 --~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 169 --TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp --EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred --cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 112245689999 9997766654 67899999976 44421 1222111111 336889999999988887788
Q ss_pred CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEE-EeeC--CEEEEcCCC
Q psy6127 462 GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLA-SACS--NMAFWIPTL 512 (515)
Q Consensus 462 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~la-s~~~--dv~iW~~~~ 512 (515)
+.|.+||..+++.+..+.. +...+.+++|+|+++.|. +... .+..|+++.
T Consensus 247 ~~i~~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 8999999987776666655 557899999999999554 4444 477777654
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-13 Score=132.43 Aligned_cols=273 Identities=13% Similarity=-0.023 Sum_probs=182.7
Q ss_pred EEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeeeeEecCC-------
Q psy6127 200 ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSK------- 262 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~------- 262 (515)
.+.+.| ..+++.+.++.....+ .+.++||+++++++. .++.|.+||..+++.+.++..+
T Consensus 47 ~vsvID--~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSC--AGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEE--TTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB
T ss_pred eEEEEE--CCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccccc
Confidence 455666 6667777777655566 799999999999886 3689999999999999998643
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEE--EECCCCeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCC-
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRY--LSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQ- 338 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~v--wd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~- 338 (515)
......++++|||++++++....+..+.+ +|..+ +..+.-. +. ..+.|+++ .+++.+.|+.+.+.|+.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccc
Confidence 13467899999999999886333567888 99877 3333211 11 12334443 556667788888888876
Q ss_pred ----CCeEE----EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCC-------CCCcCeEEEEE
Q psy6127 339 ----PNNVG----MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPG-------ERGCEWTGLKF 403 (515)
Q Consensus 339 ----~~~~~----~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~-------~~~~~i~~l~~ 403 (515)
++... .+.... .+. . .+++..++..+. +.+.+.|...........+.... ........+++
T Consensus 196 ~~~~~~v~~~~t~~i~vg~-~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSS-QAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCCCEECCCCSCTTSCBCS-CCE-E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred cccCCeEEEEeeeeeeCCC-Ccc-c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 33221 111111 122 3 666666666666 99999998653211111111100 00011112789
Q ss_pred cCCCCEEEEEEC---------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-EEEEEe-CCCcEEEEECCCC
Q psy6127 404 SPDGKLILVSTN---------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASGS-TDGQVHIWNAERG 472 (515)
Q Consensus 404 sp~~~~l~~~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sgs-~dg~I~iwd~~~~ 472 (515)
+|++++++++.. ++.+.++|+.+++.+..+..... ...++|+|||+ .+++.. .++.|.++|+.++
T Consensus 272 s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~----p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD----SDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE----ECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC----cceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 999998887643 23567999999999888875442 68999999998 455555 5899999999999
Q ss_pred eEEEEEcCCCCCCeEEEEECC
Q psy6127 473 YKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 473 ~~~~~~~~~h~~~V~~l~~sp 493 (515)
+.+.++.. . ...+.+++.+
T Consensus 348 kvv~~I~v-g-~~P~~i~~~~ 366 (368)
T 1mda_H 348 QDQSSVEL-D-KGPESLSVQN 366 (368)
T ss_dssp EEEEECCC-C-SCCCEEECCC
T ss_pred cEEEEEEC-C-CCCCEEEeec
Confidence 99999975 3 3455666655
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-11 Score=121.46 Aligned_cols=238 Identities=15% Similarity=0.085 Sum_probs=159.6
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCCe
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK--TVRVWDLRQPNN 341 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg--~i~iwd~~~~~~ 341 (515)
.....++|++++. ++++. ..++.|++||..++........... .. ++|+|+++.|+++..++ .|.++|...+..
T Consensus 131 ~~P~~la~d~~g~-lyv~d-~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQ-RDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTE-EEEEE-TTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCC-EEEEe-cCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 4578899999886 44444 4578999999998877655544333 33 99999999999888866 799999887665
Q ss_pred EEEE----e-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcC-eEEEEEcCCCCEE-EEEE
Q psy6127 342 VGMI----Q-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE-WTGLKFSPDGKLI-LVST 414 (515)
Q Consensus 342 ~~~~----~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-i~~l~~sp~~~~l-~~~s 414 (515)
...+ . ....+..++++|++..|+++..++.|+.||..................... ...++|+|++..| ++-.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 4444 2 334477899999655566677788999999876431111000011111111 2389999964444 4545
Q ss_pred CCCcEEEEECCCCceeEEeeccc------------cCCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCCCeEEEEEcCC
Q psy6127 415 NGSIIRLFDAFNGNCVQSLSGVL------------NNNASPLEATFTPDSQFVASGS-TDGQVHIWNAERGYKVCVLDGD 481 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~------------~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~ 481 (515)
.++.|+.|+.... ...+.+.. ..-..+..++++|+|+++++-+ .++.|+.|++.+++... +.+
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~-~~g- 362 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST-VAG- 362 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE-EEE-
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE-EeC-
Confidence 6788999986543 33333321 0012378999999999777777 78999999988887543 322
Q ss_pred C---------------CCCeEEEEECCCCCEEEEeeCCEEEEc
Q psy6127 482 H---------------PSAVQSLQFNPKYHMLASACSNMAFWI 509 (515)
Q Consensus 482 h---------------~~~V~~l~~sp~~~~las~~~dv~iW~ 509 (515)
+ -.....++++|++.++++-.++-+|+.
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 2 245889999999888777766645443
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-10 Score=111.07 Aligned_cols=227 Identities=9% Similarity=0.014 Sum_probs=151.1
Q ss_pred cEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 223 KINSLDYSSDG-SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 223 ~I~~l~~spd~-~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
...+..|+|++ .++++...++.|..||..+++.. .+. ....+.+++|.+++..++ ++ +..|.+||..+++...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v-~~---~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLI-AS---DDGLFLRDTATGVLTL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEE-EE---TTEEEEEETTTCCEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEE-EE---CCCEEEEECCCCcEEE
Confidence 34677899975 45566667899999999877643 233 245799999999986544 33 4459999998887543
Q ss_pred EecC----CCCCeEEEEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCC
Q psy6127 302 YFPG----HVRKVSSLNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSD 370 (515)
Q Consensus 302 ~~~~----h~~~v~~l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg 370 (515)
.... ....+.+++++|+|+++++... .+.|..+| +++.............++|+|+++.++.+. .++
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 3221 1246899999999997665442 24555555 454433333333467899999998776554 568
Q ss_pred cEEEEEee--cC-CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEE
Q psy6127 371 SIKLYDVR--SY-DKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEAT 447 (515)
Q Consensus 371 ~i~i~d~~--~~-~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 447 (515)
.|.+||+. ++ .......+...........+++++++|++.++...++.|..||. +++.+..+.... ..+.+++
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~---~~~~~~a 277 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG---KQTTCPA 277 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC---SBEEEEE
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC---CCcEEEE
Confidence 99999986 33 21111122222223345678999999987777767788999998 677666665432 2389999
Q ss_pred Ee-cCCCEEEEEeCC
Q psy6127 448 FT-PDSQFVASGSTD 461 (515)
Q Consensus 448 ~s-p~g~~l~sgs~d 461 (515)
|+ |+++.|++++..
T Consensus 278 f~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 278 FIGPDASRLLVTSAR 292 (326)
T ss_dssp EESTTSCEEEEEEBC
T ss_pred EecCCCCEEEEEecC
Confidence 98 888877665543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-11 Score=117.30 Aligned_cols=231 Identities=11% Similarity=0.051 Sum_probs=156.6
Q ss_pred ccccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 217 FRENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
+..+........|+|+|+ +++++..++.|..|+. +++ ...+..+...+..+++.++++ ++++. ..++.|.+|+.+
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~-l~v~~-~~~~~v~~~~~~ 115 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQR-LVHCE-HGRRAITRSDAD 115 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSC-EEEEE-TTTTEEEEECTT
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCC-EEEEE-CCCCEEEEECCC
Confidence 344556678899999998 5667777899999998 454 344555667789999999997 44443 346789999986
Q ss_pred CCeeeEEec---CC-CCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEEcCCCCeEEEEecCCCeeEE
Q psy6127 296 DNKYVRYFP---GH-VRKVSSLNLSPVDDSFIS----GSY-------------DKTVRVWDLRQPNNVGMIQLSGNKPIA 354 (515)
Q Consensus 296 ~~~~~~~~~---~h-~~~v~~l~~~~~~~~l~s----~s~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 354 (515)
++...... +. ...+.++++.|+|+..++ |.. .+.|..||..+++..... .......+
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl 193 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGL 193 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcce
Confidence 54332221 11 134678999999998776 332 256778887777655444 33446789
Q ss_pred EECCCCCEEEEEECC------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy6127 355 AYDPEGLAFAIGVNS------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 355 ~~s~~~~~l~~g~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
+|+|+++.++++... +.|..|++..........+. .........++++++|++. +++.+ .|.+|+. +++
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~--~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~ 268 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA--SVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQ 268 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE--CCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-TSC
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE--ECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-CCC
Confidence 999999988877665 78999998753200001111 1122334578999999844 44444 4999997 577
Q ss_pred eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
.+..+.... .+.+++|+|+++.|+.++.++
T Consensus 269 ~~~~~~~~~----~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 269 LLGHIPTPG----TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEEECSS----CCCEEEECTTSCEEEEEETTE
T ss_pred EEEEEECCC----ceeEEEEeCCCCEEEEEcCCe
Confidence 776666432 278999999999888887765
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.9e-11 Score=114.59 Aligned_cols=233 Identities=12% Similarity=0.047 Sum_probs=155.5
Q ss_pred eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy6127 255 SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334 (515)
Q Consensus 255 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw 334 (515)
.+..+...........|+|+++.++... ..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|..|
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d-~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSD-LVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEE-TTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEE-CCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 3444444556678899999999777665 46899999998 444 34455566779999999999977666666889999
Q ss_pred EcCCCCeEEEEec-----CCCeeEEEECCCCCEEEE----EEC-------------CCcEEEEEeecCCCCCceeeecCC
Q psy6127 335 DLRQPNNVGMIQL-----SGNKPIAAYDPEGLAFAI----GVN-------------SDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 335 d~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~----g~~-------------dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
|.. ++....... ...+..++++|+|++.++ |.. .+.|..||..+++.. ...
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~---~~~--- 185 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ---RMA--- 185 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE---EEE---
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE---EEe---
Confidence 986 554332211 123567999999998886 321 245666665443321 111
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECC------CcEEEEECCCCceeEEeecc-ccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNG------SIIRLFDAFNGNCVQSLSGV-LNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~d------g~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
.......++|+|+++.|+++... +.|++|++..+. +...... ......+..++++++|++.+ ++.+| |.
T Consensus 186 -~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~g-v~ 261 (305)
T 3dr2_A 186 -DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGTG-VC 261 (305)
T ss_dssp -EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEE-CCSSE-EE
T ss_pred -cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEE-ecCCc-EE
Confidence 12345689999999988887765 689999987654 2111110 01122356789999999544 44454 99
Q ss_pred EEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC
Q psy6127 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504 (515)
Q Consensus 466 iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d 504 (515)
+|+. +++.+..+.. +. .+.+++|+|+++.|..++.+
T Consensus 262 ~~~~-~g~~~~~~~~-~~-~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 262 VFDS-DGQLLGHIPT-PG-TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EECT-TSCEEEEEEC-SS-CCCEEEECTTSCEEEEEETT
T ss_pred EECC-CCCEEEEEEC-CC-ceeEEEEeCCCCEEEEEcCC
Confidence 9998 5777777765 33 58899999998877766544
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.47 E-value=5.7e-10 Score=105.59 Aligned_cols=257 Identities=9% Similarity=0.020 Sum_probs=169.8
Q ss_pred CCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeee-EecCCCCceeEEEEecCC
Q psy6127 197 SRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN-TINSKKYGVDLIKFTHSK 275 (515)
Q Consensus 197 ~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~ 275 (515)
.+..+..++.. ..... ..+..+...+.+++++++|++.++...++.|..||.. ++... ........+..+++.+++
T Consensus 39 ~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g 115 (300)
T 2qc5_A 39 KANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG 115 (300)
T ss_dssp TTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT
T ss_pred CCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC
Confidence 34455566533 12221 1233445789999999999888777668899999987 55432 223334678899999888
Q ss_pred CeEEEEEeeCCCeEEEEECCCCeeeE-EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe--cCCCee
Q psy6127 276 TTAIHASTKVDATLRYLSLHDNKYVR-YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKP 352 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~ 352 (515)
... ++. ..++.|..+|.. ++... .+......+..+++.++++..++...++.|..+|. +++...... ....+.
T Consensus 116 ~l~-v~~-~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 191 (300)
T 2qc5_A 116 DIW-FTQ-LNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPV 191 (300)
T ss_dssp CEE-EEE-TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEE
T ss_pred CEE-EEc-cCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcc
Confidence 643 333 347899999987 55443 23334567899999999997666666788999998 555443221 123477
Q ss_pred EEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE
Q psy6127 353 IAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
.++++++|+..++....+.|..||. .+. ...... ......+.+++++++|+..++...++.|..||. +++.. .
T Consensus 192 ~i~~d~~g~l~v~~~~~~~i~~~~~-~g~---~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~ 264 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMGNKIGRITT-TGE---ISEYDI-PTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-E 264 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCC---EEEEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-E
T ss_pred eEEECCCCCEEEEccCCCEEEEEcC-CCc---EEEEEC-CCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-E
Confidence 8999999987777666778999987 322 112212 223456789999999986666556789999998 45433 3
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
+... .....+.+++++++|++.++.. . .|..+|.+
T Consensus 265 ~~~~-~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 265 YQLQ-TENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EECC-STTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred EECC-ccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 3221 1223478899999998666554 4 67777653
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.46 E-value=2.7e-10 Score=109.86 Aligned_cols=223 Identities=12% Similarity=0.050 Sum_probs=150.4
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI 345 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 345 (515)
.....|+|++..++.+. ..++.|..||..+++... +. ....+.+++++|+|+++++. . ..|.+||..+++.....
T Consensus 51 ~egp~~~~~~~~l~~~d-~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFN-ILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEE-GGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE
T ss_pred CcCCeEeCCCCEEEEEE-CCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe
Confidence 45678999887777665 458899999998876543 32 34679999999999877654 4 44999999888765443
Q ss_pred ecC-----CCeeEEEECCCCCEEEEEECC----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-C
Q psy6127 346 QLS-----GNKPIAAYDPEGLAFAIGVNS----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-N 415 (515)
Q Consensus 346 ~~~-----~~~~~~~~s~~~~~l~~g~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~ 415 (515)
... ..+..++++|+|+++++...+ +...+|.+..++ ...+. ........++|+|+++.++.+. .
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~---~~~~~---~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK---VTKLF---ADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE---EEEEE---EEESSEEEEEECTTSCEEEEEETT
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc---EEEee---CCCcccCCeEEcCCCCEEEEEECC
Confidence 221 236789999999977655422 234455444221 11111 1122456899999999776654 5
Q ss_pred CCcEEEEECC--CC-cee--EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEE
Q psy6127 416 GSIIRLFDAF--NG-NCV--QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQ 490 (515)
Q Consensus 416 dg~i~iwd~~--~~-~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 490 (515)
++.|.+||+. ++ ... ..+.........+..++++++|.+.++...++.|.+||. +++.+..+.. +...+++++
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~-~~~~~~~~a 277 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-PGKQTTCPA 277 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-SCSBEEEEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC-CCCCcEEEE
Confidence 6889999986 55 321 122211112233678999999988777767788999998 6777777765 566799999
Q ss_pred EC-CCCCEEEEe
Q psy6127 491 FN-PKYHMLASA 501 (515)
Q Consensus 491 ~s-p~~~~las~ 501 (515)
|+ |++..|..+
T Consensus 278 f~g~d~~~L~vt 289 (326)
T 2ghs_A 278 FIGPDASRLLVT 289 (326)
T ss_dssp EESTTSCEEEEE
T ss_pred EecCCCCEEEEE
Confidence 98 887765444
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=4.7e-12 Score=135.25 Aligned_cols=247 Identities=13% Similarity=0.070 Sum_probs=158.9
Q ss_pred cccCCcEEEEEEcCCCCEEEEEe-----CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC-------
Q psy6127 218 RENTDKINSLDYSSDGSLLISCS-----DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV------- 285 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs-----~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~------- 285 (515)
.+|...+..++|||||++||.+. .+.+|++||+.+++.+... .+......++|+ |++.+++++...
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 35677899999999999998543 3357999999999865431 111113567899 999998887321
Q ss_pred ----CCeEEEEECCCCee----eEEecC-CCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEcCCCC-eEEEE-ecCCC
Q psy6127 286 ----DATLRYLSLHDNKY----VRYFPG-HVRKVSSLNLSPVDDSFISGSY----DKTVRVWDLRQPN-NVGMI-QLSGN 350 (515)
Q Consensus 286 ----d~~v~vwd~~~~~~----~~~~~~-h~~~v~~l~~~~~~~~l~s~s~----dg~i~iwd~~~~~-~~~~~-~~~~~ 350 (515)
...|++|++.++.. +..... |...+..+.|+|||++|+.... ++.|.++|+.++. ....+ .....
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 13599999987642 333333 4556789999999997754432 3589999998763 23333 33332
Q ss_pred eeEEEECCCCCEEEEEECC----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC---cEEEEE
Q psy6127 351 KPIAAYDPEGLAFAIGVNS----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS---IIRLFD 423 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg---~i~iwd 423 (515)
.... ++++|..|+..+.. +.|..+|+.+........+. .+...+. .|+|++++|+....++ .|++|+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~---~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI---PERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE---CCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe---cCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 3333 67777777665542 57888888765421122222 2222333 8899999888776543 688999
Q ss_pred CCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC----CcEEEEECCCCeEE
Q psy6127 424 AFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD----GQVHIWNAERGYKV 475 (515)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d----g~I~iwd~~~~~~~ 475 (515)
+..+ ....+... ....+..+.++|+++.++....+ +.++.||+.+++..
T Consensus 357 ~~g~-~~~~l~~p--~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 357 YEGK-RVREVALP--GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp TTSC-EEEEECCS--SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred CCCC-eeEEeecC--CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 8744 34444321 22235667778888766655444 78999999887643
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-12 Score=125.23 Aligned_cols=173 Identities=12% Similarity=0.032 Sum_probs=133.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-----------eEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEe
Q psy6127 309 KVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN-----------NVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~ 377 (515)
+++.+++++...++++|+.++ +++|++.... ......... +..++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999875 5569865332 223445666 999999 99999999 8899999999
Q ss_pred ecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
++..... .. ..+...+..+.+.+. .+++++.||.+.+||+.++..... . ..|.+++|||+| ++.
T Consensus 114 ~sl~~~~--~~---~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~----~---~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 114 EELSEFR--TV---TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL----A---QNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SSTTCEE--EE---EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE----E---ESEEEEEECSSE--EEE
T ss_pred hhhhccC--cc---ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccc----c---CCceEEEEcCCc--eEE
Confidence 8765211 11 123445777777655 388899999999999998876531 1 138999999999 678
Q ss_pred EeCCCcEEEEECCCCeE--EEEEcC--------CCCCCeEEEEECCCCCEEEEee
Q psy6127 458 GSTDGQVHIWNAERGYK--VCVLDG--------DHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 458 gs~dg~I~iwd~~~~~~--~~~~~~--------~h~~~V~~l~~sp~~~~las~~ 502 (515)
|..||++++|+...++. ..++.. .|...|.++.|.+++.++++-.
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 89999999999988775 566621 2678899999999999988743
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.8e-12 Score=125.14 Aligned_cols=176 Identities=14% Similarity=0.098 Sum_probs=134.1
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----------eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-----------SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
+++.+++++...++++|+.++ +++|++++.. ..... .+.. |+.++| ++..++++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~---~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS---TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE---ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE---cCCcEEE
Confidence 689999999999999999985 6679865432 11222 2445 999999 88877776 4899999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCc
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
||+.+.........|...+.++.+.+. .+++++.||.+.+||+.++.... ....+.+++|+|+| ++.|..||+
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSC
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCc
Confidence 999877666666677888988887754 38889999999999999887654 33469999999999 778999999
Q ss_pred EEEEEeecCCCCCceeeec------CCCCCcCeEEEEEcCCCCEEEEE
Q psy6127 372 IKLYDVRSYDKGPFASFKC------PGERGCEWTGLKFSPDGKLILVS 413 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~------~~~~~~~i~~l~~sp~~~~l~~~ 413 (515)
+++|+...........+.. ...+...|.++.|.+++.++++=
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999887644110112211 11356889999999999988863
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.9e-11 Score=128.47 Aligned_cols=267 Identities=12% Similarity=0.107 Sum_probs=176.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCC--CCceeEEEEec--CCCeEEEEEee----CCCeEEEEECCCCeeeEEe
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSK--KYGVDLIKFTH--SKTTAIHASTK----VDATLRYLSLHDNKYVRYF 303 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~--~~~~l~~~s~~----~d~~v~vwd~~~~~~~~~~ 303 (515)
++..++.++.|+.+..+|.++|+.+..+... ......+..+| .+..+++.+++ .++.|+.||.++|+.+..+
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 3567888999999999999999998777543 11111111111 13344444322 3689999999999988766
Q ss_pred cCC--C-----------------------------CCeEEEEEcCCCCEEEEEeCCCc-------------------EEE
Q psy6127 304 PGH--V-----------------------------RKVSSLNLSPVDDSFISGSYDKT-------------------VRV 333 (515)
Q Consensus 304 ~~h--~-----------------------------~~v~~l~~~~~~~~l~s~s~dg~-------------------i~i 333 (515)
... . .....+++.|++..++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 421 0 01125788898899999887764 999
Q ss_pred EEcCCCCeEEEEecCC----------CeeEEEECCCCC---EEEEEECCCcEEEEEeecCCCCCceee------------
Q psy6127 334 WDLRQPNNVGMIQLSG----------NKPIAAYDPEGL---AFAIGVNSDSIKLYDVRSYDKGPFASF------------ 388 (515)
Q Consensus 334 wd~~~~~~~~~~~~~~----------~~~~~~~s~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~------------ 388 (515)
+|.++|+.+..++... .........+|+ .++.++.+|.++++|.++++......+
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 9999999988775421 111122223554 688889999999999888653100000
Q ss_pred ---------------------ecCCC-CCcCeEEEEEcCCCCEEEEEEC-------------------------------
Q psy6127 389 ---------------------KCPGE-RGCEWTGLKFSPDGKLILVSTN------------------------------- 415 (515)
Q Consensus 389 ---------------------~~~~~-~~~~i~~l~~sp~~~~l~~~s~------------------------------- 415 (515)
.++.. ....+..++++|+...+++...
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 00000 0112334789998888877532
Q ss_pred --------------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC
Q psy6127 416 --------------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD 481 (515)
Q Consensus 416 --------------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 481 (515)
+|.+..||+.+|+.+.....+.. .....+...+.+++.|+.||.++.||.++|+.+.++...
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~----~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI----FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS----CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC----ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 37799999999998877765432 233466678889999999999999999999999888753
Q ss_pred CCCCeEEEEECCCCC-EEEEee
Q psy6127 482 HPSAVQSLQFNPKYH-MLASAC 502 (515)
Q Consensus 482 h~~~V~~l~~sp~~~-~las~~ 502 (515)
+.....-+.|..+|+ +++..+
T Consensus 516 ~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 516 SGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp SCCCSCCEEEEETTEEEEEEEE
T ss_pred CCcccCceEEEECCEEEEEEEe
Confidence 333334466777776 444443
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=5.1e-11 Score=126.29 Aligned_cols=264 Identities=13% Similarity=0.096 Sum_probs=179.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCC-C----CceeEEEEecCCCeEEEEEee----CCCeEEEEECCCCeeeEE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSK-K----YGVDLIKFTHSKTTAIHASTK----VDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~~s~~----~d~~v~vwd~~~~~~~~~ 302 (515)
++..++.++.|+.+..+|..+|+.+..+... . ..+...-.. .+..+++++.. .++.|+.+|..+|+.+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 4568888999999999999999999888754 2 112111111 23455554422 268999999999998877
Q ss_pred ecCCCCC--------------------------------eEEEEEcCCCCEEEEEeCCC-------------------cE
Q psy6127 303 FPGHVRK--------------------------------VSSLNLSPVDDSFISGSYDK-------------------TV 331 (515)
Q Consensus 303 ~~~h~~~--------------------------------v~~l~~~~~~~~l~s~s~dg-------------------~i 331 (515)
+...... ...++++|++..++.+..++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 6432211 13578889999888887664 59
Q ss_pred EEEEcCCCCeEEEEecCC----------CeeEEEECCCC---CEEEEEECCCcEEEEEeecCCCCCceeee---------
Q psy6127 332 RVWDLRQPNNVGMIQLSG----------NKPIAAYDPEG---LAFAIGVNSDSIKLYDVRSYDKGPFASFK--------- 389 (515)
Q Consensus 332 ~iwd~~~~~~~~~~~~~~----------~~~~~~~s~~~---~~l~~g~~dg~i~i~d~~~~~~~~~~~~~--------- 389 (515)
..+|.++++.+..++... ....+....+| ..++.++.+|.++++|.++++......+.
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 999999999988875421 12223333467 67888999999999998886521100000
Q ss_pred --------------------cCCC-CCcCeEEEEEcCCCCEEEEEECC--------------------------------
Q psy6127 390 --------------------CPGE-RGCEWTGLKFSPDGKLILVSTNG-------------------------------- 416 (515)
Q Consensus 390 --------------------~~~~-~~~~i~~l~~sp~~~~l~~~s~d-------------------------------- 416 (515)
++.. .......++++|++..+++...+
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 445 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence 0000 00112367899998888776431
Q ss_pred -----------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCC
Q psy6127 417 -----------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA 485 (515)
Q Consensus 417 -----------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 485 (515)
+.|..||+.+++.+....... ++....+..++.+++.++.||.+++||..+|+.+..+...+...
T Consensus 446 ~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~----~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~ 521 (677)
T 1kb0_A 446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS----PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVV 521 (677)
T ss_dssp ECSSCCCSCCEEEEEEEETTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred cccccCCCCCccEEEEEeCCCCcEEeecCCCC----CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcc
Confidence 779999999999887765322 23455677788899999999999999999999999987534333
Q ss_pred eEEEEECCCCC-EEEE
Q psy6127 486 VQSLQFNPKYH-MLAS 500 (515)
Q Consensus 486 V~~l~~sp~~~-~las 500 (515)
..-+.|.++|+ +++.
T Consensus 522 ~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 522 AAPSTYMVDGRQYVSV 537 (677)
T ss_dssp SCCEEEEETTEEEEEE
T ss_pred cCCEEEEeCCEEEEEE
Confidence 34566677776 4444
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.37 E-value=5e-10 Score=109.50 Aligned_cols=231 Identities=16% Similarity=0.096 Sum_probs=155.2
Q ss_pred EEc--CCCCEEEEEe-CCCeEEEEECCCC----eeeeEec-------CCCCceeEEEEecCCCeEEEEEeeC----CCeE
Q psy6127 228 DYS--SDGSLLISCS-DDDQIIIYDCEQG----TSKNTIN-------SKKYGVDLIKFTHSKTTAIHASTKV----DATL 289 (515)
Q Consensus 228 ~~s--pd~~~lasgs-~dg~i~iwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~~~----d~~v 289 (515)
.++ +++++|+..+ .+++|.++|+.+. +..+++. ........+...|++ ..+.+.++. .+.+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 7888876655 6789999999755 5566663 111245567888999 555555432 2789
Q ss_pred EEEECCCCeeeEEecCCC---CCeEEEEEcCCCCEEEEEe-------------------CCCcEEEEEcCCCCeEEEEec
Q psy6127 290 RYLSLHDNKYVRYFPGHV---RKVSSLNLSPVDDSFISGS-------------------YDKTVRVWDLRQPNNVGMIQL 347 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~h~---~~v~~l~~~~~~~~l~s~s-------------------~dg~i~iwd~~~~~~~~~~~~ 347 (515)
.++|.++++.+.++.... ..-..+.|+|+++.+++.. .+.+|.+||+.+++.+..+..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 999999999998886322 2234588899999888875 368999999999988888876
Q ss_pred CC---CeeEEEE--CCCCCEEEEEE------CCCcEEEEEeecCCCCCceeeecCC---------------CCCcCeEEE
Q psy6127 348 SG---NKPIAAY--DPEGLAFAIGV------NSDSIKLYDVRSYDKGPFASFKCPG---------------ERGCEWTGL 401 (515)
Q Consensus 348 ~~---~~~~~~~--s~~~~~l~~g~------~dg~i~i~d~~~~~~~~~~~~~~~~---------------~~~~~i~~l 401 (515)
.. ....+.| +|+++++.++. .+++|.+|....+.....+.+.... ........+
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 42 2334545 99999988776 4568877665532111111110000 002345689
Q ss_pred EEcCCCCEEEEEEC-CCcEEEEECCCC---ceeEEeecccc-----------CCCCCEEEEEecCCCEEEEEe
Q psy6127 402 KFSPDGKLILVSTN-GSIIRLFDAFNG---NCVQSLSGVLN-----------NNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 402 ~~sp~~~~l~~~s~-dg~i~iwd~~~~---~~~~~~~~~~~-----------~~~~i~~~~~sp~g~~l~sgs 459 (515)
.+||||++|+++.. .+.|.+||+... +.+..+..... .......++++|||++|+++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999999998874 679999998633 44444432200 011368899999999999887
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-09 Score=106.70 Aligned_cols=230 Identities=13% Similarity=0.081 Sum_probs=151.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe-
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV- 310 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v- 310 (515)
++..++.++.++.|..+|.++|+.+................ +..+++.+ .++.+..+|..+++.+..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~--~~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHT--SNGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEEC--TTSEEEEEETTTCCEEEEEECCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEc--CCCeEEEEECCCCcEEEEEeCCCCcee
Confidence 45678888999999999999999887776543222222222 34555543 68999999999999887765432211
Q ss_pred ----EEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeE--------EEECC--CCCEEEEEECCCcEEEEE
Q psy6127 311 ----SSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI--------AAYDP--EGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 311 ----~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~--------~~~s~--~~~~l~~g~~dg~i~i~d 376 (515)
...... +..++.++.++.+..+|.++++.........+... +...| .+..+++++.++.+..+|
T Consensus 178 ~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 178 LRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALD 255 (376)
T ss_dssp -CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEE
T ss_pred ecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEE
Confidence 112222 45688888899999999999998877654321100 11111 356777788899999999
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
.++++. ..... ......+.. ++..+++++.++.+..+|..+++........... ....... .+..|+
T Consensus 256 ~~tG~~----~w~~~---~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~--~~~~~~~--~~~~l~ 322 (376)
T 3q7m_A 256 LRSGQI----MWKRE---LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR--LLTSPVL--YNGNLV 322 (376)
T ss_dssp TTTCCE----EEEEC---CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS--CCCCCEE--ETTEEE
T ss_pred CCCCcE----Eeecc---CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC--cccCCEE--ECCEEE
Confidence 987652 11111 112334443 4668888889999999999999877665422111 1222222 256788
Q ss_pred EEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 457 SGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 457 sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
.++.+|.++++|..+|+.+.....
T Consensus 323 v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCcEEEEEec
Confidence 899999999999999999887764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=5.4e-11 Score=115.75 Aligned_cols=253 Identities=8% Similarity=-0.057 Sum_probs=168.0
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------eCCCeEEEEECCCCeeeEEecCC-------CC
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------KVDATLRYLSLHDNKYVRYFPGH-------VR 308 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~~d~~v~vwd~~~~~~~~~~~~h-------~~ 308 (515)
+|.+.|..+++.+.++.....+ .+.++|+++.++++.. ..++.|.+||..+++.+.++.-+ ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999999876666 7999999999998863 24789999999999999887533 12
Q ss_pred CeEEEEEcCCCCEEEEEeC--CCcEEE--EEcCCCCeEEEEecCCCeeEEEECCCC-CEEEEEECCCcEEEEEeec----
Q psy6127 309 KVSSLNLSPVDDSFISGSY--DKTVRV--WDLRQPNNVGMIQLSGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRS---- 379 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~s~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~i~i~d~~~---- 379 (515)
....++++|||++++.+.. +..+.+ +|..+ +..+...+. ..+.|++ ..+++.+.||.+.+.|+..
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~ 198 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAA 198 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEEEECcccccc
Confidence 3567999999999888875 467888 99877 455544321 1223443 3444556778888888765
Q ss_pred -CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--eeEEeeccc-------cCCCCCEEEEEe
Q psy6127 380 -YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN--CVQSLSGVL-------NNNASPLEATFT 449 (515)
Q Consensus 380 -~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~--~~~~~~~~~-------~~~~~i~~~~~s 449 (515)
++...... ....-...+. . ++++..++..+. +.+.+.|..... .+..+.... ........++++
T Consensus 199 ~~~v~~~~t-~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 199 AGIVGAQCT-GAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp CEECCCCSC-TTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred CCeEEEEee-eeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc
Confidence 11100000 0011112222 3 666666666666 899999986542 222221100 001112237899
Q ss_pred cCCCEEEEEeC---------CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee---CCEEEEcCCC
Q psy6127 450 PDSQFVASGST---------DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC---SNMAFWIPTL 512 (515)
Q Consensus 450 p~g~~l~sgs~---------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~---~dv~iW~~~~ 512 (515)
|+++.++.+.. ++.+.++|+.+++.+..+.. . .....++|+|||+ ++++.. +++.++|+..
T Consensus 273 ~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v-g-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-G-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-E-EEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC-C-CCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 99998887643 23566999999999988875 2 3688999999997 444444 3499999865
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=7.4e-09 Score=96.59 Aligned_cols=250 Identities=10% Similarity=0.026 Sum_probs=160.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeee-----eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSK-----NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR 308 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~ 308 (515)
++|+.+.. +.|+.+++...... ..+......+..++|.+++..++++. ..++.|..++...+...........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d-~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTD-ISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEE-TTTTEEEEEESSSCCCEEEECTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEE-CCCCEEEEEecCCCCcEEEEECCCC
Confidence 45555553 47888887654321 11222234578999999888888776 3578999999976654444433335
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEEC---CCcEEEEEeecCCCC
Q psy6127 309 KVSSLNLSPVDDSFISG-SYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVN---SDSIKLYDVRSYDKG 383 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~---dg~i~i~d~~~~~~~ 383 (515)
....+++.|++..++.+ ...+.|.+++............. .....++++|++..+..+.. .+.|..+++.....
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~- 158 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR- 158 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-
Confidence 68999999976655554 45678999998755433333222 35778999997666655553 36788888754221
Q ss_pred CceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe-CC
Q psy6127 384 PFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS-TD 461 (515)
Q Consensus 384 ~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~d 461 (515)
..+. .........++++|++..|+.+. ..+.|.++|.........+.. ...+..++.. +..|+.+. ..
T Consensus 159 --~~~~--~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~----~~~P~gi~~d--~~~lyva~~~~ 228 (267)
T 1npe_A 159 --RILA--QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG----LQYPFAVTSY--GKNLYYTDWKT 228 (267)
T ss_dssp --EEEE--CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC----CCSEEEEEEE--TTEEEEEETTT
T ss_pred --EEEE--ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC----CCCceEEEEe--CCEEEEEECCC
Confidence 1111 11223567999999887776665 457899999875443333321 1224566654 45555554 56
Q ss_pred CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC
Q psy6127 462 GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 462 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 496 (515)
+.|.++|..+++.+..+..........+++.|++.
T Consensus 229 ~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 229 NSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 89999999999999888652223467888888764
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.4e-10 Score=111.02 Aligned_cols=234 Identities=11% Similarity=0.020 Sum_probs=156.5
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCeeeeEecCC------CCceeEEEEecCCCeEEEEEee--C
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSD-----DDQIIIYDCEQGTSKNTINSK------KYGVDLIKFTHSKTTAIHASTK--V 285 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~-----dg~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~s~~--~ 285 (515)
+|-..+.+++++|+|+++++-.. ++.|.+||..+++.+..+..+ ......+++.+++..++++..+ .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999876665543 578999999999877766532 2346899999876666655421 5
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeE-EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEE
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVS-SLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 364 (515)
++.|.+||..+++..+.+.+|..... ...+.++|..+.+.+.++.++.|.. .+..++++|+++.|+
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~-------------~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL-------------GVNGIVLDAENEWLY 210 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC-------------CEEEEEECTTSCEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceec-------------ccceeEeccCCCEEE
Confidence 78999999999988777766532211 1345556777777888888776642 267799999999998
Q ss_pred EEECCC-cEEEEEeecCCCCCce------eeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 365 IGVNSD-SIKLYDVRSYDKGPFA------SFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 365 ~g~~dg-~i~i~d~~~~~~~~~~------~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
++..++ .+..++.......... .+... .+......++++++|+.+++...++.|.+||..+++....... .
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~ 288 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD-E 288 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-G
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-C
Confidence 887666 4444443211110000 00000 1112344799999999888888889999999866764333321 1
Q ss_pred cCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 438 NNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
....+..++|.++|.++++.+..+.+.+|+
T Consensus 289 -~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 289 -KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp -GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred -ceecCCeeEECCCCcEEEEeCccccccccc
Confidence 223478999999998888877655554443
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-10 Score=114.62 Aligned_cols=257 Identities=15% Similarity=0.102 Sum_probs=177.2
Q ss_pred EEEEeCCCeEEEEECCCCeeeeEecC---------------------------------C------CCceeEEEEec---
Q psy6127 236 LISCSDDDQIIIYDCEQGTSKNTINS---------------------------------K------KYGVDLIKFTH--- 273 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~~~~~~~~~~---------------------------------~------~~~v~~~~~~~--- 273 (515)
+.||+..|.++++-+.+++.++.+.. + .+.......+.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 56777888888888877766655310 0 01122344444
Q ss_pred --CCCeEEEEEeeCCCeEEEEECCCCeeeEEecC-CCCCeEEEEE-c-CCCCEEEEEe------------------CCCc
Q psy6127 274 --SKTTAIHASTKVDATLRYLSLHDNKYVRYFPG-HVRKVSSLNL-S-PVDDSFISGS------------------YDKT 330 (515)
Q Consensus 274 --~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~-h~~~v~~l~~-~-~~~~~l~s~s------------------~dg~ 330 (515)
||+++++.. ..++.|.+.|+.+.++...+.- .......+++ . |+++++++++ .++.
T Consensus 98 ~~DG~~lfVnd-~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 98 KYDGRFLFMND-KANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEEE-TTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CcCCCEEEEEc-CCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 788777754 5688899999999998874432 2345888888 5 9999998885 2457
Q ss_pred EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCC--------------------------------------cE
Q psy6127 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD--------------------------------------SI 372 (515)
Q Consensus 331 i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--------------------------------------~i 372 (515)
+.+.|..+.+....+...+....++++|+|+++++.+.+. .|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999999999998887766677899999999999888553 35
Q ss_pred EEEEeecCCCCC-ceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCc------------eeEEeecccc
Q psy6127 373 KLYDVRSYDKGP-FASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGN------------CVQSLSGVLN 438 (515)
Q Consensus 373 ~i~d~~~~~~~~-~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~------------~~~~~~~~~~ 438 (515)
.+.|.++.+... ...+... ....++.++|||+++++++ .+.+|.++|+.+.+ ....+.
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg----~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~---- 328 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA----NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE---- 328 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE----SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB----
T ss_pred EEEeCcccCCceeEEEEecC----CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC----
Confidence 555655521111 1122211 1223799999999988776 57899999998653 222222
Q ss_pred CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC----------CeEEEEEcCCCCCCe-----EEEEECCCCCEEEEee
Q psy6127 439 NNASPLEATFTPDSQFVASGSTDGQVHIWNAER----------GYKVCVLDGDHPSAV-----QSLQFNPKYHMLASAC 502 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~----------~~~~~~~~~~h~~~V-----~~l~~sp~~~~las~~ 502 (515)
.......++|+|+|....+...|+.|.+||+.+ .+.+.++.. |-.+- .++..+|||++|+++.
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV-~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec-ccccccceeccceEeCCCCCEEEEcC
Confidence 223378999999994344556789999999987 667777776 54321 1235689999999986
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5.5e-09 Score=102.69 Aligned_cols=265 Identities=8% Similarity=-0.035 Sum_probs=163.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCC---------CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKK---------YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~ 302 (515)
++..++.++.++.|..+|.++|+.+....... ..+.+ ....++..+++++ .++.+..+|.++++.+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~--~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGS--EKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEE--TTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEc--CCCEEEEEECCCCCEEEE
Confidence 45678888889999999999999887765432 22222 2223455666654 689999999999998876
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCee------EEEECCCCCEEEEEECCCcEEEEE
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKP------IAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
.............. +..++.++.++.+..+|.++++.+.......... .... .+..+++++.++.+..+|
T Consensus 129 ~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 129 TKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEE
T ss_pred EeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEE
Confidence 65433222222222 4578888899999999999999887775543221 1122 245677888899999999
Q ss_pred eecCCCCCceeeecCCCCC--cCeEEEEEcC--CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCC
Q psy6127 377 VRSYDKGPFASFKCPGERG--CEWTGLKFSP--DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~--~~i~~l~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 452 (515)
..+++..-........... ..+..+.-.| .+..+++++.++.+..+|..+|+.+...... ....+.. ++
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~-----~~~~~~~--~~ 277 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG-----SVNDFIV--DG 277 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC-----CEEEEEE--ET
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC-----CCCCceE--EC
Confidence 8876521111110000000 0000011111 2467788888999999999999877655421 1333333 46
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee--CCEEEEcCCC
Q psy6127 453 QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC--SNMAFWIPTL 512 (515)
Q Consensus 453 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~--~dv~iW~~~~ 512 (515)
..++.++.++.+..+|..+|+.+..........+...... +..+..++ +.+..+|...
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEETTT
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEEECCC
Confidence 7788888999999999999998877763122222222222 23344444 3366666554
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=8.5e-10 Score=116.93 Aligned_cols=271 Identities=13% Similarity=0.084 Sum_probs=178.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCc-----------eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG-----------VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
+..++.++.++.|.-+|..+|+.+..+...... ...+++ .+..+++.+ .|+.+..+|..+|+.+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~--~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGA--WDGRLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEEC--TTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEc--CCCEEEEEECCCCCEEe
Confidence 456777888899999999999999887654221 112222 345566554 69999999999999988
Q ss_pred EecCC-C----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCCCe------------------
Q psy6127 302 YFPGH-V----RKVSS-LNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSGNK------------------ 351 (515)
Q Consensus 302 ~~~~h-~----~~v~~-l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~------------------ 351 (515)
.+..+ . ..+.+ .... +..++.++. ++.|..+|.++|+.+..+......
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 77654 1 11211 1111 445555543 799999999999998877542211
Q ss_pred ---------------eEEEECCCCCEEEEEECCC-------------------cEEEEEeecCCCCCceeeecCCC----
Q psy6127 352 ---------------PIAAYDPEGLAFAIGVNSD-------------------SIKLYDVRSYDKGPFASFKCPGE---- 393 (515)
Q Consensus 352 ---------------~~~~~s~~~~~l~~g~~dg-------------------~i~i~d~~~~~~~~~~~~~~~~~---- 393 (515)
..++++|++..++.++.++ .|..+|.++++.. -.+....+
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~--W~~~~~~~d~wd 308 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYK--WHYQETPGDNWD 308 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE--EEEESSTTCCSC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEE--EEEecCCCcccc
Confidence 2478899999999887664 4888888876521 11111111
Q ss_pred --CCcCeEEEEEcCCC---CEEEEEECCCcEEEEECCCCceeEEeeccccC--------CC-------------------
Q psy6127 394 --RGCEWTGLKFSPDG---KLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN--------NA------------------- 441 (515)
Q Consensus 394 --~~~~i~~l~~sp~~---~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~--------~~------------------- 441 (515)
......-+....+| ..++.++.+|.++++|..+|+.+..+...... ..
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~ 388 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG 388 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC
Confidence 01122233444477 67889999999999999999987665422100 00
Q ss_pred -----CCEEEEEecCCCEEEEEeC-------------------------------------------CCcEEEEECCCCe
Q psy6127 442 -----SPLEATFTPDSQFVASGST-------------------------------------------DGQVHIWNAERGY 473 (515)
Q Consensus 442 -----~i~~~~~sp~g~~l~sgs~-------------------------------------------dg~I~iwd~~~~~ 473 (515)
.-..++++|++.++++... .|.|..||+.+++
T Consensus 389 ~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~ 468 (677)
T 1kb0_A 389 PYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK 468 (677)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE
T ss_pred cccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc
Confidence 0125789999888887643 2789999999999
Q ss_pred EEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 474 KVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 474 ~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
.+.... +..++....+..++.+++.++.+ +++||....
T Consensus 469 ~~W~~~--~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 469 AAWSVE--HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp EEEEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred EEeecC--CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 988876 34455555566667777776644 788887654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=5.3e-10 Score=119.31 Aligned_cols=242 Identities=10% Similarity=0.048 Sum_probs=156.5
Q ss_pred eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCc--EEEEEEcCCCCEEEEEeCCC--------
Q psy6127 174 VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDK--INSLDYSSDGSLLISCSDDD-------- 243 (515)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~--I~~l~~spd~~~lasgs~dg-------- 243 (515)
.+..+++.+....++..+..++++...++++| +.+++.+.. +... ...++|+ ||+.|+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~d--l~tg~~~~~---~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMD--VESKQPLET---PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEE--TTTCSEEEE---EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEE--CCCCCCCcc---ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 34445555555444444444555567888888 666654432 2222 3567899 999999998874
Q ss_pred -----eEEEEECCCCee--eeEec--C-CCCceeEEEEecCCCeEEEEEee--CCCeEEEEECCCCe-eeEEecCCCCCe
Q psy6127 244 -----QIIIYDCEQGTS--KNTIN--S-KKYGVDLIKFTHSKTTAIHASTK--VDATLRYLSLHDNK-YVRYFPGHVRKV 310 (515)
Q Consensus 244 -----~i~iwd~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~l~~~s~~--~d~~v~vwd~~~~~-~~~~~~~h~~~v 310 (515)
.|++|++.++.. ...+. . +......+.|+|+++.+++.... .++.++++|+.++. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 399999987653 22222 2 33457789999999998776642 23589999998763 345555566666
Q ss_pred EEEEEcCCCCEEEEEe-CC---CcEEEEEcCCCCe---EEEEecCCCeeEEEECCCCCEEEEEECCC---cEEEEEeecC
Q psy6127 311 SSLNLSPVDDSFISGS-YD---KTVRVWDLRQPNN---VGMIQLSGNKPIAAYDPEGLAFAIGVNSD---SIKLYDVRSY 380 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s-~d---g~i~iwd~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---~i~i~d~~~~ 380 (515)
... ++++|..|+..+ .+ +.|..+|+.++.. .........+. .|+++++.|+....++ .|++||+...
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 555 666677555444 33 5799999988765 33334333333 8999999888776544 6788887642
Q ss_pred CCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC----CcEEEEECCCCce
Q psy6127 381 DKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG----SIIRLFDAFNGNC 429 (515)
Q Consensus 381 ~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d----g~i~iwd~~~~~~ 429 (515)
. ...........+..+.++|+++.++....+ +.++.||+.+++.
T Consensus 361 ~-----~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 361 R-----VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp E-----EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred e-----eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 2 112222234456678888888877665544 7899999988764
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-10 Score=110.22 Aligned_cols=272 Identities=13% Similarity=0.044 Sum_probs=171.5
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
+....+..+...+.++...++|. +..++.+ +..+|. +++....+............. +..+++++ .++.+..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t--~~~~l~~ 121 (330)
T 3hxj_A 50 SVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTS--MDGHLYA 121 (330)
T ss_dssp CEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEEC--TTSEEEE
T ss_pred cEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEe--cCCEEEE
Confidence 33344444555667788877775 4445544 888886 666655444333333333333 44555544 6899999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECCC
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg 370 (515)
+|.. ++.......+...+.++...+++. ++.++.++.+..+|.. ++....+... ..+..+..++++...+.. +
T Consensus 122 ~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~ 195 (330)
T 3hxj_A 122 INTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---D 195 (330)
T ss_dssp ECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---S
T ss_pred EcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---C
Confidence 9988 777766665556667777777776 5667788999999998 7776666443 335567777788755543 7
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
.+..+| .++. ...........+.++...++|. +.+++.++.+..+| .+++....+...... +..+.+.+
T Consensus 196 ~l~~~d-~~g~-----~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~---~~~~~~~~ 264 (330)
T 3hxj_A 196 KVYAIN-PDGT-----EKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKWRFKTGKRI---ESSPVIGN 264 (330)
T ss_dssp SEEEEC-TTSC-----EEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEEEEECSSCC---CSCCEECT
T ss_pred EEEEEC-CCCc-----EEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeEEeeCCCCc---cccceEcC
Confidence 888888 4432 1111112234466788888875 55677778888887 466665555432221 33455555
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-CCEEEEcCC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-SNMAFWIPT 511 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~ 511 (515)
++ .|..++.+|.+..+|. +++.+..+.. ....+.++...+++.+.+.+. +.+++...+
T Consensus 265 ~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~-~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 265 TD-TIYFGSYDGHLYAINP-DGTEKWNFET-GSWIIATPVIDENGTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp TS-CEEEECTTCEEEEECT-TSCEEEEEEC-SSCCCSCCEECTTCCEEEECTTSCEEEEEC-
T ss_pred CC-eEEEecCCCCEEEECC-CCcEEEEEEc-CCccccceEEcCCCEEEEEcCCCeEEEEecc
Confidence 55 4666778888999996 7777776665 456677888888888766544 446665544
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.4e-09 Score=101.71 Aligned_cols=225 Identities=12% Similarity=0.092 Sum_probs=152.0
Q ss_pred cCCCeEEEEEeeCCCeEEEEECCCC----eeeEEec------C-CCCCeEEEEEcCCCCEEEEEeCC------CcEEEEE
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLHDN----KYVRYFP------G-HVRKVSSLNLSPVDDSFISGSYD------KTVRVWD 335 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~~~----~~~~~~~------~-h~~~v~~l~~~~~~~~l~s~s~d------g~i~iwd 335 (515)
++++++++.+ -.+++|.++|+.+. +.+.++. . .......+...|+| .++++..+ |.|.++|
T Consensus 93 ~~r~~l~v~~-l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPG-LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEB-TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEcc-CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 6777776654 57899999999765 5556552 1 12245678899999 77776655 7899999
Q ss_pred cCCCCeEEEEecCCC----eeEEEECCCCCEEEEEE-------------------CCCcEEEEEeecCCCCCceeeecCC
Q psy6127 336 LRQPNNVGMIQLSGN----KPIAAYDPEGLAFAIGV-------------------NSDSIKLYDVRSYDKGPFASFKCPG 392 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~----~~~~~~s~~~~~l~~g~-------------------~dg~i~i~d~~~~~~~~~~~~~~~~ 392 (515)
.++++.+..+..... ...+.|+|+++.+++.. .+.+|.+||+.+.+ ....+...
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg- 247 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLG- 247 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESC-
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecC-
Confidence 999999998864422 23477899999888874 36899999998642 22222221
Q ss_pred CCCcCeEEEEE--cCCCCEEEEEEC------CCcEEEEECCCCce--eEEe--eccc-------------cCCCCCEEEE
Q psy6127 393 ERGCEWTGLKF--SPDGKLILVSTN------GSIIRLFDAFNGNC--VQSL--SGVL-------------NNNASPLEAT 447 (515)
Q Consensus 393 ~~~~~i~~l~~--sp~~~~l~~~s~------dg~i~iwd~~~~~~--~~~~--~~~~-------------~~~~~i~~~~ 447 (515)
........+.| +|++++++++++ +++|.+|....++. .+.+ .... .....+..+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 12233445656 999999888774 56887776554432 1111 1100 0013478899
Q ss_pred EecCCCEEEEEeC-CCcEEEEECC---CCeEEEEEcCC-------C---C---CCeEEEEECCCCCEEEEee
Q psy6127 448 FTPDSQFVASGST-DGQVHIWNAE---RGYKVCVLDGD-------H---P---SAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 448 ~sp~g~~l~sgs~-dg~I~iwd~~---~~~~~~~~~~~-------h---~---~~V~~l~~sp~~~~las~~ 502 (515)
+||||++|+++.. .+.|.+||+. +.+.+..+..+ | . +.-..++++|||++|..+.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999988764 5789999985 34666666531 0 0 1357899999999988887
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.21 E-value=6.5e-10 Score=112.49 Aligned_cols=241 Identities=12% Similarity=0.104 Sum_probs=167.4
Q ss_pred CCCCEEEEEeC-CCeEEEEECCCCeeeeEecCC-CCceeEEEE-e-cCCCeEEEEE----------------eeCCCeEE
Q psy6127 231 SDGSLLISCSD-DDQIIIYDCEQGTSKNTINSK-KYGVDLIKF-T-HSKTTAIHAS----------------TKVDATLR 290 (515)
Q Consensus 231 pd~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~s----------------~~~d~~v~ 290 (515)
+||++++.... ++.|.+.|+.+.++...+... ......+++ . |++.++++++ ...++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 48888877665 567999999999988855432 245788888 4 8999987764 12456899
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------cEE
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK--------------------------------------TVR 332 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg--------------------------------------~i~ 332 (515)
++|.++.+...++.--. ....++++|+|+++++.+.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999998887765222 356688999999988888553 478
Q ss_pred EEEcCC--CCe-EEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCC------CCCceeeecCCCCCcCeEEEE
Q psy6127 333 VWDLRQ--PNN-VGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYD------KGPFASFKCPGERGCEWTGLK 402 (515)
Q Consensus 333 iwd~~~--~~~-~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~------~~~~~~~~~~~~~~~~i~~l~ 402 (515)
+.|.++ ++. +..+........+.++|||+++++++ .+.+|.++|+.+.+ ..+.......-........++
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 888887 555 66776666788899999999877765 67899999998631 111111111223334567999
Q ss_pred EcCCCCEEEE-EECCCcEEEEECCC----------CceeEEeeccccC--CCCCEEEEEecCCCEEEEEeC---CCc---
Q psy6127 403 FSPDGKLILV-STNGSIIRLFDAFN----------GNCVQSLSGVLNN--NASPLEATFTPDSQFVASGST---DGQ--- 463 (515)
Q Consensus 403 ~sp~~~~l~~-~s~dg~i~iwd~~~----------~~~~~~~~~~~~~--~~~i~~~~~sp~g~~l~sgs~---dg~--- 463 (515)
|+|+| ++++ .-.|+.|.+||+.+ .+.+..+..+... ...-....++|||++|++... |..
T Consensus 338 F~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~ 416 (595)
T 1fwx_A 338 FDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNV 416 (595)
T ss_dssp ECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCC
T ss_pred ECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccC
Confidence 99999 5554 45789999999877 4556666554321 000112345799999998853 332
Q ss_pred -------EEEEECCCCe
Q psy6127 464 -------VHIWNAERGY 473 (515)
Q Consensus 464 -------I~iwd~~~~~ 473 (515)
-.++|+..++
T Consensus 417 gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 417 GPLKPENDQLIDISGDK 433 (595)
T ss_dssp CSSCCEEEEEEECSSSS
T ss_pred CCCCCCcceEEEcCCCc
Confidence 1789996655
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.1e-09 Score=112.87 Aligned_cols=273 Identities=12% Similarity=0.137 Sum_probs=173.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCc----------e-eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG----------V-DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
+..++.++.++.|..+|..+|+.+..+...... + ..+.. .+..+++++ .|+.+..+|.++|+.+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~--~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGV--LDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC--TTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEc--cCCEEEEEECCCCCEee
Confidence 557788888899999999999999887644321 0 11222 345555554 69999999999999887
Q ss_pred EecCC--CCCeEEEEEcC--CCCEEEEEe------CCCcEEEEEcCCCCeEEEEecCC--C-------------------
Q psy6127 302 YFPGH--VRKVSSLNLSP--VDDSFISGS------YDKTVRVWDLRQPNNVGMIQLSG--N------------------- 350 (515)
Q Consensus 302 ~~~~h--~~~v~~l~~~~--~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~--~------------------- 350 (515)
.+... ......+..+| .+..++.++ .++.|..||.++|+.+..+.... .
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred eecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 66532 11111111111 133444443 37899999999999887764210 0
Q ss_pred -----------eeEEEECCCCCEEEEEECCCc-------------------EEEEEeecCCCCCceeeecCCC------C
Q psy6127 351 -----------KPIAAYDPEGLAFAIGVNSDS-------------------IKLYDVRSYDKGPFASFKCPGE------R 394 (515)
Q Consensus 351 -----------~~~~~~s~~~~~l~~g~~dg~-------------------i~i~d~~~~~~~~~~~~~~~~~------~ 394 (515)
-..++++|++..+++++.++. |..+|.++++..- .+....+ .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W--~~~~~~~d~wd~~~ 303 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW--HYQTTPGDAWDYTA 303 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEE--EEESSTTCCSCCCC
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeE--eeecCCcccccccC
Confidence 024788999999999887764 8999998875221 1111101 1
Q ss_pred CcCeEEEEEcCCCC---EEEEEECCCcEEEEECCCCceeEEeeccc-------------------------cC-------
Q psy6127 395 GCEWTGLKFSPDGK---LILVSTNGSIIRLFDAFNGNCVQSLSGVL-------------------------NN------- 439 (515)
Q Consensus 395 ~~~i~~l~~sp~~~---~l~~~s~dg~i~iwd~~~~~~~~~~~~~~-------------------------~~------- 439 (515)
..+..-.....+|+ .++.++.+|.++++|..+|+.+....... ..
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 11222222223565 78889999999999999999874332110 00
Q ss_pred ----CCCCEEEEEecCCCEEEEEeC---------------------------------------------CCcEEEEECC
Q psy6127 440 ----NASPLEATFTPDSQFVASGST---------------------------------------------DGQVHIWNAE 470 (515)
Q Consensus 440 ----~~~i~~~~~sp~g~~l~sgs~---------------------------------------------dg~I~iwd~~ 470 (515)
...-..++++|+..++++... +|.|+.||+.
T Consensus 384 ~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~ 463 (689)
T 1yiq_A 384 AFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV 463 (689)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred CcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence 000123789999888887532 3779999999
Q ss_pred CCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 471 RGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 471 ~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
+|+.+...+. + .++..-.+...+.+++.++.+ ++.||.+.+
T Consensus 464 tG~~~W~~~~-~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 464 KQQAAWEVPY-V-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp TTEEEEEEEE-S-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCCeEeEccC-C-CCccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 9999988864 3 334444555566777777654 888887654
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-11 Score=120.20 Aligned_cols=188 Identities=16% Similarity=0.135 Sum_probs=108.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCC-e
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRK-V 310 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~-v 310 (515)
++..+++++.||.|+.||..+|+.+..+.. ..+.+..+..++..++. ++.|+.++.||.++++.+..+..+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~--~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLP--DPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEE--CTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEE--eCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 577899999999999999999999988876 44555555556544433 247999999999999887666544211 1
Q ss_pred E-EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeee
Q psy6127 311 S-SLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK 389 (515)
Q Consensus 311 ~-~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~ 389 (515)
. +..+. ++..+++++.|+.++.||.++|+.+..+.... ...++|++..+++++.++.++.||.++++..-.....
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 0 00111 35578888899999999999999887765443 2345678889999999999999999887532221111
Q ss_pred cCCCCCcCeEEEEEcCCC---CEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 390 CPGERGCEWTGLKFSPDG---KLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 390 ~~~~~~~~i~~l~~sp~~---~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
. .....++++. ..+++++.+|.++.||..+|+.+....
T Consensus 160 ~-------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 160 D-------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp E-------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred c-------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 0 1122333332 467778999999999999999877665
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.8e-09 Score=101.53 Aligned_cols=217 Identities=12% Similarity=0.034 Sum_probs=144.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEE
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSS 312 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 312 (515)
+..+..++.++.+..+|.. ++.......+...+.++...+++. +++++ .++.+..+|.. ++....+......+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt--~~~~l~~~d~~-g~~~~~~~~~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGS--NDNYLYAINPD-GTEKWRFKTNDAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEEC--TTSEEEEECTT-SCEEEEEECSSCCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEc--CCCEEEEECCC-CCEeEEEecCCCceee
Confidence 4567788889999999988 777777666655666677766665 44443 57999999998 8777666655666777
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC
Q psy6127 313 LNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391 (515)
Q Consensus 313 l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~ 391 (515)
+...+++...+ ++ +.+..+| .+++........ ..+.++..+++|.. .+++.++.+..+|... . .......
T Consensus 182 ~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~~g-~--~~~~~~~- 252 (330)
T 3hxj_A 182 ASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINPDG-T--EKWRFKT- 252 (330)
T ss_dssp CEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECTTS-C--EEEEEEC-
T ss_pred eEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECCCC-C--EeEEeeC-
Confidence 88877777544 44 8899999 777766655433 34667788888754 4566778888886422 1 1112221
Q ss_pred CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 392 ~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
....+..+.+.+++ .|.+++.+|.+..+|. +++....+... ...+.++...++|. |..++.+|.+++...+.
T Consensus 253 --~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~---~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 253 --GKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETG---SWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp --SSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECS---SCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred --CCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcC---CccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 11222345555565 5667888888999995 67766655432 22356677777776 55588899999887654
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.6e-11 Score=119.13 Aligned_cols=203 Identities=12% Similarity=0.070 Sum_probs=119.5
Q ss_pred CCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCC--e
Q psy6127 274 SKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGN--K 351 (515)
Q Consensus 274 ~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~ 351 (515)
++..+++++ .|+.|+.||..+|+.+..+.. +.+.+..+.+++..+++++.|+.|+.||.++++.+........ +
T Consensus 8 ~~~~v~~gs--~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVST--LDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEE--TTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEc--CCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 355666554 699999999999999988875 4555556667777888888999999999999887665533210 1
Q ss_pred e-EEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcee
Q psy6127 352 P-IAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV 430 (515)
Q Consensus 352 ~-~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~ 430 (515)
. ...+. .+..+++++.++.++.||.++++... ....+. ...++|++..+++++.|+.++.||.++|+.+
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w-----~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ-----TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE-----EecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 0 11111 35567788889999999999876321 111111 2345678889999999999999999999876
Q ss_pred EEeeccccCCCCCEEEEEecCC---CEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeE-EEEECCCCCE
Q psy6127 431 QSLSGVLNNNASPLEATFTPDS---QFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQ-SLQFNPKYHM 497 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~-~l~~sp~~~~ 497 (515)
..+..... ...+++++. ..+++++.||.++.||..+|+.+..... ..++. ...+++++..
T Consensus 154 W~~~~~~~-----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 154 WNATYFDY-----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY--ASPVVAFYVWQREGLR 217 (369)
T ss_dssp CEEEEEEE-----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC--SSCEEEEEECTTSSCE
T ss_pred EeEecccc-----cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC--CCceEEEEEecCCceE
Confidence 65543211 112233332 4577788999999999999999887763 44554 4566677754
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=8.1e-09 Score=109.32 Aligned_cols=266 Identities=13% Similarity=0.163 Sum_probs=169.4
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCC----CceeEEEEecCCCeEEEEEee----CCCeEEEEECCCCeeeEEec
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKK----YGVDLIKFTHSKTTAIHASTK----VDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~s~~----~d~~v~vwd~~~~~~~~~~~ 304 (515)
+..++.++.|+.+..+|.++|+.+..+.... ..+...-.. .+..+++.+++ .++.|..+|.++|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 5578888899999999999999988776431 111110000 13445544322 25899999999999887764
Q ss_pred CC---C----------------------------CCeEEEEEcCCCCEEEEEeCCC-------------------cEEEE
Q psy6127 305 GH---V----------------------------RKVSSLNLSPVDDSFISGSYDK-------------------TVRVW 334 (515)
Q Consensus 305 ~h---~----------------------------~~v~~l~~~~~~~~l~s~s~dg-------------------~i~iw 334 (515)
.. . .....+++.|++..++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 0112468888888888887766 39999
Q ss_pred EcCCCCeEEEEecC----------CCeeEEEECCCCC---EEEEEECCCcEEEEEeecCCCCCce---------ee----
Q psy6127 335 DLRQPNNVGMIQLS----------GNKPIAAYDPEGL---AFAIGVNSDSIKLYDVRSYDKGPFA---------SF---- 388 (515)
Q Consensus 335 d~~~~~~~~~~~~~----------~~~~~~~~s~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~---------~~---- 388 (515)
|.++++.+..++.. .+.....+..+|+ .++.++.+|.++++|..+++..... .+
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 99999998887543 1122222334665 6888889999999998876521000 00
Q ss_pred -----------------ecCCC-CCcCeEEEEEcCCCCEEEEEE------------------------------------
Q psy6127 389 -----------------KCPGE-RGCEWTGLKFSPDGKLILVST------------------------------------ 414 (515)
Q Consensus 389 -----------------~~~~~-~~~~i~~l~~sp~~~~l~~~s------------------------------------ 414 (515)
.++.. .......++++|+...+++..
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 00000 000122478888877666521
Q ss_pred CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCC
Q psy6127 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
.+|.|..||..+++.+-....... .....+...+.+++.++.||.++.||.++|+.+..+.....-.-.-+.+..+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~----~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTH----WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSS----CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ccceEEEEeCCCCcEEEEccCCCC----CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 237899999999998776654322 2334555678899999999999999999999998887521111122334445
Q ss_pred CC-EEEEeeC
Q psy6127 495 YH-MLASACS 503 (515)
Q Consensus 495 ~~-~las~~~ 503 (515)
|+ +++.+++
T Consensus 512 G~~yva~~~G 521 (668)
T 1kv9_A 512 GRQYVAIMAG 521 (668)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 55 5555543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-07 Score=90.61 Aligned_cols=241 Identities=12% Similarity=0.044 Sum_probs=154.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC--------------------CCCceeEEEEecCCCeEEEE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS--------------------KKYGVDLIKFTHSKTTAIHA 281 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~ 281 (515)
....+++|+++|++++++..++.|..|+..+++.. .+.. ....+..+++.+++..++++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 44577889999988888888999999998765432 2210 01347889999844566666
Q ss_pred EeeCCCeEEEEECCCCeeeEEe---cC-CCCCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEEcCCC
Q psy6127 282 STKVDATLRYLSLHDNKYVRYF---PG-HVRKVSSLNLSP-VDDSFISGSY-----------------DKTVRVWDLRQP 339 (515)
Q Consensus 282 s~~~d~~v~vwd~~~~~~~~~~---~~-h~~~v~~l~~~~-~~~~l~s~s~-----------------dg~i~iwd~~~~ 339 (515)
. ..+.+..+|..+++..... .+ .......+++.+ +|+..++-.. ++.|..||..++
T Consensus 98 d--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 98 D--CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp E--TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred E--CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 4 3556888987765432211 11 123578899999 8986665432 367888998777
Q ss_pred CeEEEEecCCCeeEEEECCCCCEEEEE-ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC---
Q psy6127 340 NNVGMIQLSGNKPIAAYDPEGLAFAIG-VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN--- 415 (515)
Q Consensus 340 ~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~--- 415 (515)
+.............++++|+++.+.++ +..+.|..|++..........+.. ... ...++++++|++.++...
T Consensus 176 ~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 176 ETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp EEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEEETT
T ss_pred EEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecCccc
Confidence 654333322346679999999876665 456899999987532222222221 112 678999999986665544
Q ss_pred -------CCcEEEEECCCCceeEEeeccccC-CCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 416 -------GSIIRLFDAFNGNCVQSLSGVLNN-NASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 416 -------dg~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
.+.|..+|. .++.+..+....+. ...+..+++ .+++++++...++.|..+++..
T Consensus 252 ~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 466888886 57777666543221 233666666 4565555555678899998753
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.8e-08 Score=89.86 Aligned_cols=210 Identities=10% Similarity=-0.001 Sum_probs=143.3
Q ss_pred eeeEeeeeccccCC--cEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeeeeEecCCCC-ceeEEEEecCCCeEEEEEe
Q psy6127 209 RSYRVAKVFRENTD--KINSLDYSSDGSLLISCSD--DDQIIIYDCEQGTSKNTINSKKY-GVDLIKFTHSKTTAIHAST 283 (515)
Q Consensus 209 ~~~~~~~~~~~h~~--~I~~l~~spd~~~lasgs~--dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~s~ 283 (515)
.+++.+.++. |.. ....++|+||+.+.++.+. ++.|++.|..+++.+..+..... ....+++ +++.++.++
T Consensus 7 ~~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t- 82 (266)
T 2iwa_A 7 YIVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVV- 82 (266)
T ss_dssp EEEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEE-
T ss_pred cCceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEE-
Confidence 3456666663 443 4689999998755555443 58999999999999888764322 2223444 466777776
Q ss_pred eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC------CeeEEEEC
Q psy6127 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG------NKPIAAYD 357 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~s 357 (515)
..++.+.++|..+.+.+.++...... ...+++||+.++.+..++.|.++|..+.+....+.... ..+.+.+.
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred ecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 57999999999999998887532111 23355678877777778999999999999888875432 24567777
Q ss_pred CCCCEEEEEECCCcEEEEEeecCCCCCceeeecC----------CCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCC
Q psy6127 358 PEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP----------GERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFN 426 (515)
Q Consensus 358 ~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~----------~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~ 426 (515)
+|..++....++.|.+.|..+++.. ..+... ........+++|+|+++.+++++ ..+.+...++..
T Consensus 161 -dg~lyvn~~~~~~V~vID~~tg~V~--~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 161 -NGEVWANIWQTDCIARISAKDGTLL--GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp -TTEEEEEETTSSEEEEEETTTCCEE--EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred -CCEEEEecCCCCeEEEEECCCCcEE--EEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 6755555556889999999886522 222211 01123567999999988766655 567788877654
Q ss_pred C
Q psy6127 427 G 427 (515)
Q Consensus 427 ~ 427 (515)
.
T Consensus 238 ~ 238 (266)
T 2iwa_A 238 V 238 (266)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.5e-08 Score=91.75 Aligned_cols=197 Identities=14% Similarity=0.096 Sum_probs=133.4
Q ss_pred eeeEEecCCCC--CeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcE
Q psy6127 298 KYVRYFPGHVR--KVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSI 372 (515)
Q Consensus 298 ~~~~~~~~h~~--~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i 372 (515)
+.+.++. |.. ....+.|+|++.++++.+. ++.|.++|+.+++.+..+..........+.++++.+..+. .++.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEE
Confidence 4455553 443 3689999998755555443 5899999999999999886554333333333455555544 67899
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc--CCCCCEEEEEec
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN--NNASPLEATFTP 450 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp 450 (515)
.++|..+.+. ...+... ... ...+++||+.++++..++.+.++|..+.+....+..... ....++.+.|.
T Consensus 89 ~viD~~t~~v--~~~i~~g--~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 89 FIYDRRTLSN--IKNFTHQ--MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp EEEETTTTEE--EEEEECC--SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEECCCCcE--EEEEECC--CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 9999887542 2222221 111 233556888888777889999999999988888774322 12235678888
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCC------------CCCCeEEEEECCCCCEEEEeeC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGD------------HPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------------h~~~V~~l~~sp~~~~las~~~ 503 (515)
+|...+....++.|.+.|..+++.+..+... .....+.++|+|+++.+..+++
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 6755555556789999999999999988641 0135689999999876666653
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-08 Score=89.95 Aligned_cols=202 Identities=13% Similarity=0.155 Sum_probs=139.0
Q ss_pred eeeEEecCCCCC--eEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcE
Q psy6127 298 KYVRYFPGHVRK--VSSLNLSPVDDSFISGSYDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSI 372 (515)
Q Consensus 298 ~~~~~~~~h~~~--v~~l~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i 372 (515)
+.+.++. |... ...+.|+ ++.++.+.+.+| .|+.+|+++++.+..+..........+.++++.+.... .++.+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 3455563 5443 4788998 677777777766 89999999999999987766554444444555665554 58899
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc--CCCCCEEEEEec
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN--NNASPLEATFTP 450 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp 450 (515)
.+||..+.+ ....+.... . ...++++++.|+.+..++.|.++|..+.+....+..... ....++.+.|.
T Consensus 110 ~v~D~~t~~--~~~ti~~~~-e-----G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 110 FVWNIRNLR--QVRSFNYDG-E-----GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp EEEETTTCC--EEEEEECSS-C-----CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEECccCc--EEEEEECCC-C-----ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 999998855 222333221 1 123335777787777778899999999998888765321 11224567776
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCC-----------CCCCeEEEEECCCCCEEEEeeCC-EEEEcC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGD-----------HPSAVQSLQFNPKYHMLASACSN-MAFWIP 510 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-----------h~~~V~~l~~sp~~~~las~~~d-v~iW~~ 510 (515)
+|+..+..-.++.|.+.|..+|+.+..+... -.+..+.+||+|+++.|..++.. =++|.+
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 6765555556889999999999999888641 02356899999988888877765 344443
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-06 Score=81.36 Aligned_cols=221 Identities=9% Similarity=0.009 Sum_probs=143.7
Q ss_pred CcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 222 DKINSLDYSSDGSLLISCS-DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
..+..++|+|++..|+.+. .++.|..++...+.....+.........+++.+++..++++. ...+.|.+++.+.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d-~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD-SQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEE-CCCCEEEEEEcCCCCEE
Confidence 4578999999766665554 568999999876544433433335688999999888887776 35789999998754332
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEE-CCCcEEEE
Q psy6127 301 RYFPGHVRKVSSLNLSPVDDSFISGSY---DKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGV-NSDSIKLY 375 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~-~dg~i~i~ 375 (515)
............++++|++..|+.+.. .+.|..+++........... -.....++++|++..|..+. ..+.|..+
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 223222356789999997776665554 36888888764432222211 23467899999877665554 56789999
Q ss_pred EeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
|...... .... .. ......++.. +..++.+. ..+.|..+|..+++.+..+.... ......+++.|++.
T Consensus 195 ~~~g~~~---~~~~--~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~--~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 195 NPAQPGR---RKVL--EG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK--QTRLYGITIALSQC 263 (267)
T ss_dssp ETTEEEE---EEEE--EC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSS--CCCCCCEEEECSCC
T ss_pred ecCCCce---EEEe--cC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccc--ccccceeeecCccC
Confidence 9865321 1111 11 1223466664 45565555 56899999999999888876422 11257788888764
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-07 Score=86.23 Aligned_cols=200 Identities=15% Similarity=0.103 Sum_probs=137.0
Q ss_pred eeeEeeeeccccCCc--EEEEEEcCCCCEEEEEeCCC--eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee
Q psy6127 209 RSYRVAKVFRENTDK--INSLDYSSDGSLLISCSDDD--QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK 284 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~--I~~l~~spd~~~lasgs~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~ 284 (515)
..++.++++ .|... ...+.|+ ++.+..+.+.+| .|+.+|+++++.+..+.... ........++++.++.++ .
T Consensus 29 ~~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~lt-w 104 (262)
T 3nol_A 29 YDYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLT-W 104 (262)
T ss_dssp EEEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEE-S
T ss_pred cceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEE-e
Confidence 345666666 45433 4788998 677777777766 89999999999998886543 333333444577887776 4
Q ss_pred CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC------CCeeEEEECC
Q psy6127 285 VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS------GNKPIAAYDP 358 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~s~ 358 (515)
.++.+.++|.++.+.+.++.-.. .- ..+.++++.|+.+..++.|.++|..+.+.+..+... ...+.+.+.
T Consensus 105 ~~~~v~v~D~~t~~~~~ti~~~~-eG--~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRSFNYDG-EG--WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp SSSEEEEEETTTCCEEEEEECSS-CC--CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred eCCEEEEEECccCcEEEEEECCC-Cc--eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 79999999999999998886432 22 233356777777666788999999999988887542 123346665
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceeeec-------CCCCCcCeEEEEEcCCCCEEEEEECC
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-------PGERGCEWTGLKFSPDGKLILVSTNG 416 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-------~~~~~~~i~~l~~sp~~~~l~~~s~d 416 (515)
+|...+..-.++.|.+.|.++++......+.. ........++|+|+|+++.|++.+..
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 67655555568899999988765221111110 01123456899999999888887753
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=9.7e-08 Score=99.01 Aligned_cols=270 Identities=12% Similarity=0.094 Sum_probs=166.0
Q ss_pred EEEcCCCCE----EEEEeCCCeEEEEECCCCeeeeEecCCCC----ceeE-EEEecCCCeEEEEEee----CCCeEEEEE
Q psy6127 227 LDYSSDGSL----LISCSDDDQIIIYDCEQGTSKNTINSKKY----GVDL-IKFTHSKTTAIHASTK----VDATLRYLS 293 (515)
Q Consensus 227 l~~spd~~~----lasgs~dg~i~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~s~~----~d~~v~vwd 293 (515)
++++|.+.. ++.++.|+.+..+|.++|+.+........ .+.+ ... .+ ..+++.++. .++.|+.+|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~-g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VK-DKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ET-TEEEECCBCGGGTCCCEEEEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-EC-CEEEEEecccccCCCCeEEEEE
Confidence 455554444 88888999999999999999877653321 1111 111 12 344443321 379999999
Q ss_pred CCCCeeeEEecCCCCC-------------------------------------e-EEEEEcCCCCEEEEEeCC-------
Q psy6127 294 LHDNKYVRYFPGHVRK-------------------------------------V-SSLNLSPVDDSFISGSYD------- 328 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~-------------------------------------v-~~l~~~~~~~~l~s~s~d------- 328 (515)
.++|+.+..+...... + ..+++.++...++.+..+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~ 268 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNET 268 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCc
Confidence 9999988766432111 0 134566777778877665
Q ss_pred ---------CcEEEEEcCCCCeEEEEecCCC----------eeEEEEC-CCC---CEEEEEECCCcEEEEEeecCCCCCc
Q psy6127 329 ---------KTVRVWDLRQPNNVGMIQLSGN----------KPIAAYD-PEG---LAFAIGVNSDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 329 ---------g~i~iwd~~~~~~~~~~~~~~~----------~~~~~~s-~~~---~~l~~g~~dg~i~i~d~~~~~~~~~ 385 (515)
+.|..+|.++++.+..++.... ...+... .+| ..++.++.+|.+.++|.++++..-.
T Consensus 269 ~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 269 MRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp GSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 3799999999999888754321 1112222 567 4677788999999999887652110
Q ss_pred eeee---------------------------------cCC-CCCcCeEEEEEcCCCCEEEEEE-----------------
Q psy6127 386 ASFK---------------------------------CPG-ERGCEWTGLKFSPDGKLILVST----------------- 414 (515)
Q Consensus 386 ~~~~---------------------------------~~~-~~~~~i~~l~~sp~~~~l~~~s----------------- 414 (515)
..+. ++. ........++++|+..++++..
T Consensus 349 ~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g 428 (599)
T 1w6s_A 349 NKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAG 428 (599)
T ss_dssp EESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTT
T ss_pred ccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCC
Confidence 0000 000 0001123567888776665532
Q ss_pred ----------------------CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 415 ----------------------NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 415 ----------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
..|.+.-||+.+++.+-....... ...-.....+.+++.++.||.++.||.++|
T Consensus 429 ~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~----~~~g~~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 429 QFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA----VWGGTMATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp SCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC----CCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC----ccCcceEecCCEEEEECCCCeEEEEECCCC
Confidence 346789999999987766643211 111223345778888999999999999999
Q ss_pred eEEEEEcCCCCCCeEEEEECCCCC-EEEEee
Q psy6127 473 YKVCVLDGDHPSAVQSLQFNPKYH-MLASAC 502 (515)
Q Consensus 473 ~~~~~~~~~h~~~V~~l~~sp~~~-~las~~ 502 (515)
+.+.+++........-+.+..+|+ ++++.+
T Consensus 505 ~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 505 DLLWKFKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp CEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CEEEEeeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 999888652222222345556776 455443
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.4e-06 Score=91.38 Aligned_cols=278 Identities=12% Similarity=0.109 Sum_probs=181.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE
Q psy6127 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~ 302 (515)
|.++...+++++.+ |+.++-+..|+..+++..... ......|.++...+++. +.+++ .++.+..||..+++....
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt--~~~Gl~~~~~~~~~~~~~ 250 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVAT--EGAGLFLINPKTKEIKNY 250 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEE--BSSCEEEEETTTTEEEEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEE--CCCCeEEEeCCCCeEEEe
Confidence 88998888886554 666545889998776543321 12345688888777664 44444 355689999888765443
Q ss_pred ecC-------CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec--------CCCeeEEEECCCCCEEEEEE
Q psy6127 303 FPG-------HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL--------SGNKPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 303 ~~~-------h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~~s~~~~~l~~g~ 367 (515)
... ....|.++...++|...+ |+.+ -|.+||..+++....... ...+.++..+++|.+ ..|+
T Consensus 251 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt 327 (795)
T 4a2l_A 251 LHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-WLGT 327 (795)
T ss_dssp CCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-EEEE
T ss_pred ecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-EEEE
Confidence 221 235699999998887544 4455 588999887764433211 234788888988875 4567
Q ss_pred CCCcEEEEEeecCCCCCceeeec----CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc-----cc
Q psy6127 368 NSDSIKLYDVRSYDKGPFASFKC----PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV-----LN 438 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~~~----~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-----~~ 438 (515)
.++-|..|+...... ..... .......|.++...++|. |..|+.++-+..|+..+++........ .-
T Consensus 328 ~~~Gl~~~~~~~~~~---~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 328 YFGGLNYYHPIRNRF---KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp SSSCEEEECGGGGSS---EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CC
T ss_pred CCCCeEEeCCCcccc---eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 777888888765321 11111 112345688999998886 445777778999998877543322111 01
Q ss_pred CCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC---CCCCCeEEEEECCCCCEEEEeeCCEEEEcCCC
Q psy6127 439 NNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG---DHPSAVQSLQFNPKYHMLASACSNMAFWIPTL 512 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~las~~~dv~iW~~~~ 512 (515)
....|.++...++|+.|..|+.++-+..||..+++....... .....|.++...++|.+.+.+.+.+.+|+.+.
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~ 480 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQ 480 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTT
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCC
Confidence 124488899888888566777777799999988765443221 13467999999999887766655577777643
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-05 Score=86.87 Aligned_cols=276 Identities=12% Similarity=0.040 Sum_probs=181.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-------CCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-------KKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
...|.++...++|.+.+ |+.+| |.+||..+++....... ....|.++...++|. +.+++ .++-|..++
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt--~~~Gl~~~~ 336 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGT--YFGGLNYYH 336 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEE--SSSCEEEEC
T ss_pred CCeEEEEEEcCCCCEEE-EeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEE--CCCCeEEeC
Confidence 46799999998887544 55554 88999887765433211 235688998888875 44444 577899998
Q ss_pred CCCCeeeEEec------CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe---------cCCCeeEEEECC
Q psy6127 294 LHDNKYVRYFP------GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ---------LSGNKPIAAYDP 358 (515)
Q Consensus 294 ~~~~~~~~~~~------~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---------~~~~~~~~~~s~ 358 (515)
..++....... -....|.++...++|. |..|+.++-|..||..+++...... ....+.++..++
T Consensus 337 ~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 415 (795)
T 4a2l_A 337 PIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE 415 (795)
T ss_dssp GGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET
T ss_pred CCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC
Confidence 76654332211 1245699999988776 5557788789999988776544321 123477888888
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec-
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG- 435 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~- 435 (515)
+++.|.+|+.++-+..||..+++. ..+.. .......|.++...++|+..+ |+. +.+..||..+++.......
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~---~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQV---ENFNQRNSQLVNENVYAILPDGEGNLWL-GTL-SALVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCE---EEECTTTSCCSCSCEEEEEECSSSCEEE-EES-SCEEEEETTTTEEEECCBCT
T ss_pred CCCEEEEEeCcCceeEEeCCCCcE---EEeecCCCCcCCCeeEEEEECCCCCEEE-Eec-CceeEEeCCCCeEEEccccc
Confidence 888567777877899999776431 11111 112345788999998887554 444 4588999887754332211
Q ss_pred --cccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC------CCCCCeEEEEECCCCCEEEEeeCCEEE
Q psy6127 436 --VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG------DHPSAVQSLQFNPKYHMLASACSNMAF 507 (515)
Q Consensus 436 --~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~------~h~~~V~~l~~sp~~~~las~~~dv~i 507 (515)
..-....|.++...++|.+.+.. .+ -+..||..+++. .+.. .....|.++...++|.+.+++.+.+..
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~ 566 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGG-EE-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYC 566 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEE-SS-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEE
T ss_pred cccccCCceEEEEEECCCCCEEEEe-CC-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCcee
Confidence 01122458889899888866644 44 588999887766 3321 134579999999999877666556777
Q ss_pred EcCC
Q psy6127 508 WIPT 511 (515)
Q Consensus 508 W~~~ 511 (515)
|+..
T Consensus 567 ~d~~ 570 (795)
T 4a2l_A 567 FNEK 570 (795)
T ss_dssp EETT
T ss_pred ECCC
Confidence 7754
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-07 Score=97.03 Aligned_cols=260 Identities=11% Similarity=0.046 Sum_probs=163.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCC----ceeE-EEEecCCCeEEEEEee----CCCeEEEEECCCCeeeEEe
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKY----GVDL-IKFTHSKTTAIHASTK----VDATLRYLSLHDNKYVRYF 303 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~s~~----~d~~v~vwd~~~~~~~~~~ 303 (515)
+..++.++.|+.+..+|..+|+.+........ .+.+ ... .+..+++.+.. .++.|..+|.++|+.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 55788888899999999999999877653321 1111 111 13445544421 1789999999999988766
Q ss_pred cCCCCC-------------------------------------e-EEEEEcCCCCEEEEEeCC----------------C
Q psy6127 304 PGHVRK-------------------------------------V-SSLNLSPVDDSFISGSYD----------------K 329 (515)
Q Consensus 304 ~~h~~~-------------------------------------v-~~l~~~~~~~~l~s~s~d----------------g 329 (515)
...... + ..+++.++...++.+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 432110 0 135667766777766532 3
Q ss_pred cEEEEEcCCCCeEEEEecCC----------CeeEEEECCCCC---EEEEEECCCcEEEEEeecCCCCCceeeecCC----
Q psy6127 330 TVRVWDLRQPNNVGMIQLSG----------NKPIAAYDPEGL---AFAIGVNSDSIKLYDVRSYDKGPFASFKCPG---- 392 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~~~----------~~~~~~~s~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~---- 392 (515)
.|..+|.++++.+..++... ....+...++|+ .++.++.+|.+.++|..+++..- ......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w--~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIV--AEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEE--EEESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEe--eecccCCccc
Confidence 59999999999988775431 111122234674 56778889999999987764211 111000
Q ss_pred ------CC--------------------------CcCeEEEEEcCCCCEEEEEE--------------------------
Q psy6127 393 ------ER--------------------------GCEWTGLKFSPDGKLILVST-------------------------- 414 (515)
Q Consensus 393 ------~~--------------------------~~~i~~l~~sp~~~~l~~~s-------------------------- 414 (515)
.. ......++++|+...+++.+
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 00 00113578888887777654
Q ss_pred -----------CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCC
Q psy6127 415 -----------NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHP 483 (515)
Q Consensus 415 -----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 483 (515)
.++.+..||..+++.+..+..... +....+...+..++.++.||.++.||.++|+.+.++.....
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~----~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA----AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC----CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCCCC----ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 347899999999998777654221 22233344567788899999999999999999988875222
Q ss_pred CCeEEEEECCCCCEEEE
Q psy6127 484 SAVQSLQFNPKYHMLAS 500 (515)
Q Consensus 484 ~~V~~l~~sp~~~~las 500 (515)
..-.-+.+..+|+.++.
T Consensus 507 ~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 507 GIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cEeeeEEEEECCEEEEE
Confidence 11122345567765443
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=3.3e-07 Score=95.07 Aligned_cols=266 Identities=15% Similarity=0.156 Sum_probs=162.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCC----cee-EEEEec---CCC-eEEEEEe----eCCCeEEEEECCCCee
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKY----GVD-LIKFTH---SKT-TAIHAST----KVDATLRYLSLHDNKY 299 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~----~v~-~~~~~~---~~~-~l~~~s~----~~d~~v~vwd~~~~~~ 299 (515)
+..++.++.|+.+..+|.++|+.+........ .+. ...... +++ .+++.+. +.++.|+.+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 55788888999999999999999877654321 111 111111 123 3333321 1378999999999998
Q ss_pred eEEecCCCCCe-----------------------------------------EEEEEcCCCCEEEEEeC-----------
Q psy6127 300 VRYFPGHVRKV-----------------------------------------SSLNLSPVDDSFISGSY----------- 327 (515)
Q Consensus 300 ~~~~~~h~~~v-----------------------------------------~~l~~~~~~~~l~s~s~----------- 327 (515)
+.........+ ..+++.|+...++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 76553211000 13466677777776663
Q ss_pred ---------C----CcEEEEEcCCCCeEEEEecCCC---------eeEE-EEC-CCCC---EEEEEECCCcEEEEEeecC
Q psy6127 328 ---------D----KTVRVWDLRQPNNVGMIQLSGN---------KPIA-AYD-PEGL---AFAIGVNSDSIKLYDVRSY 380 (515)
Q Consensus 328 ---------d----g~i~iwd~~~~~~~~~~~~~~~---------~~~~-~~s-~~~~---~l~~g~~dg~i~i~d~~~~ 380 (515)
| +.|..+|.++++.+-.++.... ...+ ... .+|+ .++.++.+|.++++|.+++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5899999999999988754211 1122 221 4674 6788889999999998775
Q ss_pred CCCCceeee---------------------------------------cCCC-CCcCeEEEEEcCCCCEEEEEE------
Q psy6127 381 DKGPFASFK---------------------------------------CPGE-RGCEWTGLKFSPDGKLILVST------ 414 (515)
Q Consensus 381 ~~~~~~~~~---------------------------------------~~~~-~~~~i~~l~~sp~~~~l~~~s------ 414 (515)
+..-..... ++.. .......++++|+...+++..
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~ 436 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKED 436 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhccee
Confidence 421000000 0000 000122467788766555433
Q ss_pred ---------------------------CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 415 ---------------------------NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 415 ---------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
.+|.+.-||+.+++.+-....... ...-.....+.+++.|+.||.++.|
T Consensus 437 ~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~----~~~g~~~tagglvf~g~~dg~l~A~ 512 (582)
T 1flg_A 437 YWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP----LWAGVLATAGNLVFTGTGDGYFKAF 512 (582)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC----CCSCCEEETTTEEEEECTTSEEEEE
T ss_pred eecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC----CcccceEeCCCEEEEECCCCcEEEE
Confidence 257899999999998766654322 2222223357788889999999999
Q ss_pred ECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEEee
Q psy6127 468 NAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLASAC 502 (515)
Q Consensus 468 d~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las~~ 502 (515)
|.++|+.+.+++......-.-+.|..+|+ ++++.+
T Consensus 513 D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 513 DAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEc
Confidence 99999999988752211112256667776 555443
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.2e-07 Score=86.10 Aligned_cols=199 Identities=10% Similarity=-0.004 Sum_probs=136.3
Q ss_pred eeeeEeeeeccccC--CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC
Q psy6127 208 VRSYRVAKVFRENT--DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 208 ~~~~~~~~~~~~h~--~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
....+.++++ .|. .....+.|+ ++.+..+.+.+|.|+++|+++++.+..+ .. .........++++.++.++ ..
T Consensus 40 ~~~~~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~lt-w~ 114 (268)
T 3nok_A 40 RRVAHIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLT-WT 114 (268)
T ss_dssp EEEEEEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEE-SS
T ss_pred ccceEEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEE-cc
Confidence 4445666666 443 334788887 4667778888899999999999998887 32 3333333445677787776 57
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCC------CeeEEEECCC
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG------NKPIAAYDPE 359 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~s~~ 359 (515)
++.+.++|.++.+.+.++.-. ..-+.++ ++++.|+.+..++.|.++|..+.+.+..+.... ..+.+.|. +
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp SCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 999999999999999888643 2223444 568888887778999999999999888875432 23456665 6
Q ss_pred CCEEEEEECCCcEEEEEeecCCCCCceeee-c-------CCCCCcCeEEEEEcCCCCEEEEEEC
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFK-C-------PGERGCEWTGLKFSPDGKLILVSTN 415 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~-~-------~~~~~~~i~~l~~sp~~~~l~~~s~ 415 (515)
|..++....++.|.+.|.++++......+. . ........++|+++|+++.|++.+.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 765555556888999998876522111111 0 1123346789999998877776654
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.1e-07 Score=81.32 Aligned_cols=202 Identities=15% Similarity=0.114 Sum_probs=136.8
Q ss_pred eeeEEecCCC--CCeEEEEEcCCCCEEEEEeCC--CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE-ECCCcE
Q psy6127 298 KYVRYFPGHV--RKVSSLNLSPVDDSFISGSYD--KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG-VNSDSI 372 (515)
Q Consensus 298 ~~~~~~~~h~--~~v~~l~~~~~~~~l~s~s~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i 372 (515)
+.+..+ .|. .....+.|++ +.++.+.+.+ ..|+.+|+++++.+.............+.+.++.+... -.++.+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEE
Confidence 345555 354 4567899986 5566666665 48999999999999998777655444344445555544 468899
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc--CCCCCEEEEEec
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN--NNASPLEATFTP 450 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp 450 (515)
.+||..+.+ ....+.... .. ..++ +++..|+++..++.|.++|..+.+.+..+..... ....++.+.+.
T Consensus 88 ~v~D~~tl~--~~~ti~~~~---~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 88 FVYDLATLT--PRARFRYPG---EG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp EEEETTTTE--EEEEEECSS---CC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEECCcCc--EEEEEeCCC---Cc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 999998754 222222221 12 2444 5677777777788999999999998888765332 11235566665
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEcCC------------CCCCeEEEEECCCCCEEEEeeCC-EEEEcC
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGYKVCVLDGD------------HPSAVQSLQFNPKYHMLASACSN-MAFWIP 510 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------------h~~~V~~l~~sp~~~~las~~~d-v~iW~~ 510 (515)
+|+..+....+..|.+.|..+|+.+..+... ..+..+.++++|++..|..++.. =++|.+
T Consensus 159 ~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v 231 (243)
T 3mbr_X 159 NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEI 231 (243)
T ss_dssp TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEE
Confidence 6665555556789999999999999887631 12356899999988877777755 344443
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.1e-07 Score=86.46 Aligned_cols=200 Identities=15% Similarity=0.097 Sum_probs=135.2
Q ss_pred eeeEEecCCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeE--EEECCCCCEEEEEECCCcEE
Q psy6127 298 KYVRYFPGHVR--KVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI--AAYDPEGLAFAIGVNSDSIK 373 (515)
Q Consensus 298 ~~~~~~~~h~~--~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~s~~~~~l~~g~~dg~i~ 373 (515)
+.+.++. |.. ....+.|+. +.++.+.+.+|.|+.+|+++++.+..+ ....... +++.. ++..+..-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEE
Confidence 3445553 443 347888873 567778888899999999999998888 6554444 45443 23344444689999
Q ss_pred EEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecccc--CCCCCEEEEEecC
Q psy6127 374 LYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLN--NNASPLEATFTPD 451 (515)
Q Consensus 374 i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp~ 451 (515)
+||..+.+. ...+... ... ..++ ++++.|+.+..++.|.++|..+.+.+..+..... ....++.+.|. +
T Consensus 120 V~D~~Tl~~--~~ti~~~-~eG---wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 120 TWSGMPPQR--ERTTRYS-GEG---WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp EEETTTTEE--EEEEECS-SCC---CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEECCcCcE--EEEEeCC-Cce---eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 999987542 2223221 111 1344 5788888888889999999999998888765332 12235667777 7
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEcCC------------CCCCeEEEEECCCCCEEEEeeCC-EEEEcC
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGD------------HPSAVQSLQFNPKYHMLASACSN-MAFWIP 510 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------------h~~~V~~l~~sp~~~~las~~~d-v~iW~~ 510 (515)
|+..+....++.|.+.|..+|+.+..+.-. -.+..+.+||+|+++.|..++.. =++|.+
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 765555556889999999999999887641 12356899999987766666654 344443
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.8e-07 Score=98.94 Aligned_cols=270 Identities=13% Similarity=0.106 Sum_probs=168.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCce-----------eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeE
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGV-----------DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVR 301 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v-----------~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~ 301 (515)
+..++.++.++.|.-+|..+|+.+..+....... ..+++ .+..+++.+ .|+.+..+|..+|+.+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~--~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGT--LDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEEC--TTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEc--CCCEEEEEECCCCCEee
Confidence 5577778889999999999999988876432210 11222 244555543 69999999999999887
Q ss_pred EecCCC----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCC--C------------------
Q psy6127 302 YFPGHV----RKVSS-LNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSG--N------------------ 350 (515)
Q Consensus 302 ~~~~h~----~~v~~-l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~--~------------------ 350 (515)
.+.... ..+.+ ..+. +..++.+.. +|.|..+|.++|+.+..+.... +
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 765321 11111 1111 345555543 5899999999999988775310 0
Q ss_pred ------------eeEEEECCCCCEEEEEECCCc-------------------EEEEEeecCCCCCceeeecCCCC-----
Q psy6127 351 ------------KPIAAYDPEGLAFAIGVNSDS-------------------IKLYDVRSYDKGPFASFKCPGER----- 394 (515)
Q Consensus 351 ------------~~~~~~s~~~~~l~~g~~dg~-------------------i~i~d~~~~~~~~~~~~~~~~~~----- 394 (515)
...++++|+...++.++.++. |..+|.++++..- .... ..+
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W--~~~~-~~~~~wd~ 296 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW--HYQV-TPGDSWDF 296 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE--EEES-STTCCSCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceee--Eeec-CCCccccc
Confidence 013688888889888877663 8888888765211 1111 111
Q ss_pred --CcCeEEEEEcCCCC---EEEEEECCCcEEEEECCCCceeEEeecccc---------CC--------------------
Q psy6127 395 --GCEWTGLKFSPDGK---LILVSTNGSIIRLFDAFNGNCVQSLSGVLN---------NN-------------------- 440 (515)
Q Consensus 395 --~~~i~~l~~sp~~~---~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~---------~~-------------------- 440 (515)
..+.....+..+|+ .++.++.+|.++++|..+|+.+........ ..
T Consensus 297 ~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~ 376 (668)
T 1kv9_A 297 TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPS 376 (668)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSC
T ss_pred cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCC
Confidence 12222223334665 688899999999999999998744322110 00
Q ss_pred ----CCCEEEEEecCCCEEEEEe------------------------------------CCCcEEEEECCCCeEEEEEcC
Q psy6127 441 ----ASPLEATFTPDSQFVASGS------------------------------------TDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 441 ----~~i~~~~~sp~g~~l~sgs------------------------------------~dg~I~iwd~~~~~~~~~~~~ 480 (515)
..-..++++|+..+++... .+|.|..||..+|+.+-+.+.
T Consensus 377 ~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~ 456 (668)
T 1kv9_A 377 PFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY 456 (668)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE
T ss_pred CccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC
Confidence 0011267888877666421 237899999999999877763
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 481 DHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 481 ~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
..+.....+...+.+++.++.+ ++.||.+..
T Consensus 457 --~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 457 --PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp --SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred --CCCCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 2333333344456666666644 777877654
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.3e-07 Score=80.70 Aligned_cols=198 Identities=16% Similarity=0.091 Sum_probs=133.9
Q ss_pred eeEeeeeccccC--CcEEEEEEcCCCCEEEEEeCC--CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC
Q psy6127 210 SYRVAKVFRENT--DKINSLDYSSDGSLLISCSDD--DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 210 ~~~~~~~~~~h~--~~I~~l~~spd~~~lasgs~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
.++.++++ .|. .....+.|++ +.+..+.+.+ ..|+.+|+++++.+..+..... .......+.++.++.++ ..
T Consensus 8 ~~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~lt-w~ 83 (243)
T 3mbr_X 8 GYRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLT-WR 83 (243)
T ss_dssp CEEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEE-SS
T ss_pred ceEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEE-ee
Confidence 35566666 454 4466899986 5566666665 4899999999999888765432 23333344567777776 57
Q ss_pred CCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC------CCeeEEEECCC
Q psy6127 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS------GNKPIAAYDPE 359 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~s~~ 359 (515)
++.+.++|.++.+.+.++.... .-+.++ ++++.|+.+..++.|.++|..+.+.+..+... ...+.+.+. +
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-N 159 (243)
T ss_dssp SSEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-C
Confidence 9999999999999998886432 224444 56777777777899999999999988887543 123445554 6
Q ss_pred CCEEEEEECCCcEEEEEeecCCCCCceeeecC--------CCCCcCeEEEEEcCCCCEEEEEEC
Q psy6127 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP--------GERGCEWTGLKFSPDGKLILVSTN 415 (515)
Q Consensus 360 ~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~--------~~~~~~i~~l~~sp~~~~l~~~s~ 415 (515)
|+.++....+..|.+.|.++++......+... .......++|+++|+++.|++.+.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 66555554678889988887652211111100 122346789999999888877764
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.84 E-value=7.2e-06 Score=79.40 Aligned_cols=246 Identities=10% Similarity=0.029 Sum_probs=154.6
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
.+..+|.+..+++ +|+.+. ...|+..++........+.. ...+..++|.+.+..++.+- ...+.|..+++..+...
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D-~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSD-VTLDRILRANLNGSNVE 108 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCE
T ss_pred CCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEe-ccCCceEEEecCCCCce
Confidence 3445666666644 444443 35688888875544443433 34588999999888888775 35789999998876544
Q ss_pred EEecCCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEE-CC-CcEEEEE
Q psy6127 301 RYFPGHVRKVSSLNLSPVDDSF-ISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGV-NS-DSIKLYD 376 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~-~d-g~i~i~d 376 (515)
............+++.+.+..| ++-...+.|.+.++........... -.....++++|.+..+.... .. +.|..++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 4443333456789999866555 4445567899999876554433322 24478899999766655554 33 6787777
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV 455 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l 455 (515)
+.... ..............++++|++..|+.+. ..+.|..+|+........+... ...+..+++. ++.+.
T Consensus 189 ~dG~~-----~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~---~~~P~giav~-~~~ly 259 (349)
T 3v64_C 189 MDGSG-----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LPHPFAITVF-EDSLY 259 (349)
T ss_dssp TTSCS-----CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS---CSSEEEEEEE-TTEEE
T ss_pred CCCCC-----cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC---CCCceEEEEE-CCEEE
Confidence 76432 1111112233567999999877777665 4578999997644332222222 2236788883 45555
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEc
Q psy6127 456 ASGSTDGQVHIWNAERGYKVCVLD 479 (515)
Q Consensus 456 ~sgs~dg~I~iwd~~~~~~~~~~~ 479 (515)
++-...+.|..++..+|+....+.
T Consensus 260 ~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 260 WTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEETTTTEEEEEETTTCCSCEEEE
T ss_pred EecCCCCeEEEEEccCCCccEEec
Confidence 555567889888876776555554
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=8.4e-07 Score=91.91 Aligned_cols=270 Identities=14% Similarity=0.067 Sum_probs=162.3
Q ss_pred CCEEEEEeC-CCeEEEEEC-CCCeeeeEecCCCCc-----------eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 233 GSLLISCSD-DDQIIIYDC-EQGTSKNTINSKKYG-----------VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 233 ~~~lasgs~-dg~i~iwd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
+..++.++. ++.|.-+|. .+|+.+..+...... ...++. .+..+++.+ .|+.+..+|..+|+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~--~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQ--ANGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC--TTSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEe--CCCEEEEEECCCCCE
Confidence 446667777 899999999 899998877543210 011222 245555554 689999999999998
Q ss_pred eEEecCCC--C--CeEE-EEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCCCe-----------------
Q psy6127 300 VRYFPGHV--R--KVSS-LNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSGNK----------------- 351 (515)
Q Consensus 300 ~~~~~~h~--~--~v~~-l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~----------------- 351 (515)
+....... . .+.+ .... +..++.++. ++.|..+|.++++.+..+......
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 87654211 0 1111 1111 345666654 799999999999998877543221
Q ss_pred ----------------------eEEEECCCCCEEEEEECC----------------CcEEEEEeecCCCCCceeeecCC-
Q psy6127 352 ----------------------PIAAYDPEGLAFAIGVNS----------------DSIKLYDVRSYDKGPFASFKCPG- 392 (515)
Q Consensus 352 ----------------------~~~~~s~~~~~l~~g~~d----------------g~i~i~d~~~~~~~~~~~~~~~~- 392 (515)
..++++++...+..++.+ +.|..+|.++++.. -......
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~--W~~~~~~~ 293 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAK--WGYQKTPH 293 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEE--EEEESSTT
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEE--EEecCCCC
Confidence 125667777777776532 25888888876521 1111111
Q ss_pred ------CCCcCeEEEEEcCCCC---EEEEEECCCcEEEEECCCCceeEEeeccccC----------CCC-----------
Q psy6127 393 ------ERGCEWTGLKFSPDGK---LILVSTNGSIIRLFDAFNGNCVQSLSGVLNN----------NAS----------- 442 (515)
Q Consensus 393 ------~~~~~i~~l~~sp~~~---~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~----------- 442 (515)
....++ -+...++|+ .++.++.+|.++++|..+|+.+......... ..+
T Consensus 294 d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~ 372 (571)
T 2ad6_A 294 DEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMD 372 (571)
T ss_dssp CSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTT
T ss_pred cccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCC
Confidence 111222 223334674 5677888999999999999887665432100 000
Q ss_pred ---------------CEEEEEecCCCEEEEEe-------------------------------------CCCcEEEEECC
Q psy6127 443 ---------------PLEATFTPDSQFVASGS-------------------------------------TDGQVHIWNAE 470 (515)
Q Consensus 443 ---------------i~~~~~sp~g~~l~sgs-------------------------------------~dg~I~iwd~~ 470 (515)
-..++++|+..++++.. .+|.|..||..
T Consensus 373 ~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~ 452 (571)
T 2ad6_A 373 HKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLT 452 (571)
T ss_dssp CCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTT
T ss_pred CCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECC
Confidence 02467888888777653 34789999999
Q ss_pred CCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC--CEEEEcCCCC
Q psy6127 471 RGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS--NMAFWIPTLS 513 (515)
Q Consensus 471 ~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--dv~iW~~~~~ 513 (515)
+|+.+.+... ...+........+..+..++. .++.||.+..
T Consensus 453 tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 453 TGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp TCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 9998887753 222222222223344444553 3666666543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.83 E-value=6.8e-06 Score=78.01 Aligned_cols=241 Identities=12% Similarity=0.094 Sum_probs=146.1
Q ss_pred eeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC-Ce
Q psy6127 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD-AT 288 (515)
Q Consensus 210 ~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d-~~ 288 (515)
..+.+..+..+ .....++|+|+|+++++-..++.|..||... +....+.. ......+++.++++ ++++....+ ..
T Consensus 21 ~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~-l~vad~~~~~~~ 96 (306)
T 2p4o_A 21 PAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGD-LVATGWNADSIP 96 (306)
T ss_dssp CEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSC-EEEEEECTTSCE
T ss_pred CceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCc-EEEEeccCCcce
Confidence 34555555443 5678899999999777766789999999874 33333332 35688999999998 444442223 35
Q ss_pred EEEEECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCe-EEEEe-------c-C--CCeeEEEE
Q psy6127 289 LRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN-VGMIQ-------L-S--GNKPIAAY 356 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~-------~-~--~~~~~~~~ 356 (515)
|..+|..+++...... ........++..+++..+++-..++.|..+|..+++. +.... . . .....+
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 7777877776543222 1223345556555554455444688899999876532 11110 0 1 113334
Q ss_pred CCCCCEEEEEE-CCCcEEEEEeec-CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 357 DPEGLAFAIGV-NSDSIKLYDVRS-YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 357 s~~~~~l~~g~-~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
+|+++.++++. ..+.|..|++.. +.......+... .....++++++|++.++....+.|.++|.. ++......
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEEC
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEee
Confidence 78887665554 567899999875 221111111111 123479999999877766677899999964 65432211
Q ss_pred ccccCCCCCEEEEEe---cCCCEEEEEeCCC
Q psy6127 435 GVLNNNASPLEATFT---PDSQFVASGSTDG 462 (515)
Q Consensus 435 ~~~~~~~~i~~~~~s---p~g~~l~sgs~dg 462 (515)
.......+++++|. |+++.|+.++..+
T Consensus 250 -~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 250 -AEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -GGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -cccccCCceEEEEecccCCCCEEEEECCCC
Confidence 11122347899998 8888777766544
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.9e-07 Score=98.76 Aligned_cols=275 Identities=11% Similarity=0.053 Sum_probs=158.5
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------eEEEEECCCCeee--eEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 226 SLDYSS-DGSLLISCSDDD-----------QIIIYDCEQGTSK--NTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 226 ~l~~sp-d~~~lasgs~dg-----------~i~iwd~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+++.| +++.++.|+.++ .+.+||..+++.. ..+.. +.....++++..++..+ +.+|..+..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly-v~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV-VTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE-EECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE-EeCCCCCCceE
Confidence 556777 888999887643 6889999877543 22322 22334456777777644 44444567899
Q ss_pred EEECCCCeeeEEecCCC-CCeEEEEEcCCCCEEEEEe-CC-----CcEEEEEcCCCCeEEEE-----ecCCCeeEEEECC
Q psy6127 291 YLSLHDNKYVRYFPGHV-RKVSSLNLSPVDDSFISGS-YD-----KTVRVWDLRQPNNVGMI-----QLSGNKPIAAYDP 358 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~s-~d-----g~i~iwd~~~~~~~~~~-----~~~~~~~~~~~s~ 358 (515)
+||..+++-...-..+. ..-.+++..++++.++.|+ .+ ..+.+||..+.+....- ..........+..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99998876543322222 1223456667899999988 44 56999999887654431 1111001122334
Q ss_pred CCCEEEEEECCC---------cEEEEEeecCCCCCceeeecCCC------CCcCeEEEEEcC-CCCEEEEEECCC-----
Q psy6127 359 EGLAFAIGVNSD---------SIKLYDVRSYDKGPFASFKCPGE------RGCEWTGLKFSP-DGKLILVSTNGS----- 417 (515)
Q Consensus 359 ~~~~l~~g~~dg---------~i~i~d~~~~~~~~~~~~~~~~~------~~~~i~~l~~sp-~~~~l~~~s~dg----- 417 (515)
++..++.|+.+| .+..||..+.... ........ ....-.++.|.. +++.+++|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~--~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV--KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE--EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCccee--ecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 566666665544 4677877654311 11110000 111223555544 677777777432
Q ss_pred ------cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----------CcEEEEECCCCeEEEEEcC
Q psy6127 418 ------IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----------GQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 418 ------~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----------g~I~iwd~~~~~~~~~~~~ 480 (515)
.+.+||..+................-.+++..|+|++++.|+.+ ..+.+||..+++....-..
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence 57788887766543320111111113456677899999999854 4689999988764432111
Q ss_pred C-CCCCeEEEEECCCCCEEEEeeC
Q psy6127 481 D-HPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 481 ~-h~~~V~~l~~sp~~~~las~~~ 503 (515)
. .........+.|++++++.|++
T Consensus 507 ~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 507 SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCccccccHhhcCCCcEEEecCCC
Confidence 1 1222345567899999999884
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=3.6e-06 Score=87.25 Aligned_cols=195 Identities=14% Similarity=0.134 Sum_probs=123.8
Q ss_pred CCEEEEEeC-CCeEEEEEC-CCCeeeeEecCCCCc-----------eeEEEEecCCCe----EEEEEeeCCCeEEEEECC
Q psy6127 233 GSLLISCSD-DDQIIIYDC-EQGTSKNTINSKKYG-----------VDLIKFTHSKTT----AIHASTKVDATLRYLSLH 295 (515)
Q Consensus 233 ~~~lasgs~-dg~i~iwd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~s~~~d~~v~vwd~~ 295 (515)
+..++.++. ++.|.-+|. .+|+.+..+...... ...+++.|.+.. +++.+ .|+.+..+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t--~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ--LDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC--TTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc--CCCEEEEEECC
Confidence 456777777 889999999 899998877643221 123455444444 65554 69999999999
Q ss_pred CCeeeEEecCCC----CCeEE-EEEcCCCCEEEEEe------CCCcEEEEEcCCCCeEEEEecCCCe-------------
Q psy6127 296 DNKYVRYFPGHV----RKVSS-LNLSPVDDSFISGS------YDKTVRVWDLRQPNNVGMIQLSGNK------------- 351 (515)
Q Consensus 296 ~~~~~~~~~~h~----~~v~~-l~~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~~------------- 351 (515)
+|+.+....... ..+.+ ..+. +..++.++ .++.|+.+|.++|+.+-.+......
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 999886654221 01111 1111 33455554 3899999999999998877543321
Q ss_pred --------------------------eEEEECCCCCEEEEEECCC----------------cEEEEEeecCCCCCceeee
Q psy6127 352 --------------------------PIAAYDPEGLAFAIGVNSD----------------SIKLYDVRSYDKGPFASFK 389 (515)
Q Consensus 352 --------------------------~~~~~s~~~~~l~~g~~dg----------------~i~i~d~~~~~~~~~~~~~ 389 (515)
...+++++...++.++.++ .|..+|.++++.. -...
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~--W~~q 295 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK--FGYQ 295 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE--EEEE
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee--eEee
Confidence 1346677778888877653 7888888876521 1111
Q ss_pred cCCC-------CCcCeEEEEEc-CCC---CEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 390 CPGE-------RGCEWTGLKFS-PDG---KLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 390 ~~~~-------~~~~i~~l~~s-p~~---~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
...+ ...++ -+... .+| +.++.++.+|.++++|..+|+.+....
T Consensus 296 ~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 296 KTPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SSTTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1111 11222 12222 567 467778899999999999999876654
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-05 Score=76.21 Aligned_cols=236 Identities=9% Similarity=-0.024 Sum_probs=141.5
Q ss_pred eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC--cE
Q psy6127 254 TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK--TV 331 (515)
Q Consensus 254 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg--~i 331 (515)
+.+..+... .....++|.+++. ++++. ..++.|..||.... ....+. ....+..+++.++|+++++..... .|
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~-lyv~d-~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGT-IFVTN-HEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSC-EEEEE-TTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred eEeEeCCCC-CCcceEEECCCCC-EEEEe-CCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 344445433 4577899999886 44443 35789999998754 333332 235688999999999666554322 47
Q ss_pred EEEEcCCCCeEEEEecC--CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce---eee--cCCCCCcCeEEEEEc
Q psy6127 332 RVWDLRQPNNVGMIQLS--GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA---SFK--CPGERGCEWTGLKFS 404 (515)
Q Consensus 332 ~iwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~---~~~--~~~~~~~~i~~l~~s 404 (515)
..+|..+++........ .....++..+++..+++-..++.|..+|.......... ... ...........+ +
T Consensus 98 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp EEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred EEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 77787787765443322 22334555555554554445788888886532100000 000 011111234455 8
Q ss_pred CCCCEEEEEE-CCCcEEEEECCC-Cce--eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEE--EE
Q psy6127 405 PDGKLILVST-NGSIIRLFDAFN-GNC--VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVC--VL 478 (515)
Q Consensus 405 p~~~~l~~~s-~dg~i~iwd~~~-~~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~--~~ 478 (515)
|++++|+++. ..+.|..|++.. ++. ...+... .....++++++|+++++....+.|.++|.. |+... .+
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~ 250 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA 250 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec
Confidence 8888776665 567899999864 321 1122111 225679999999887777678899999975 66533 23
Q ss_pred cCCCCCCeEEEEEC---CCCCEEEEee
Q psy6127 479 DGDHPSAVQSLQFN---PKYHMLASAC 502 (515)
Q Consensus 479 ~~~h~~~V~~l~~s---p~~~~las~~ 502 (515)
.. .....++++|. |++..|..++
T Consensus 251 ~~-~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 251 EQ-GVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp GG-TCTTEEEEEECCSTTTTTEEEEEE
T ss_pred cc-ccCCceEEEEecccCCCCEEEEEC
Confidence 32 33568999999 8876555543
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.5e-05 Score=73.39 Aligned_cols=235 Identities=12% Similarity=0.044 Sum_probs=147.3
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC----CeeeEEecCCCCCe
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD----NKYVRYFPGHVRKV 310 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~----~~~~~~~~~h~~~v 310 (515)
+|+.+.. ..|+..|+.+.+....+.. ......++|.+.+..++.+. ...+.|..+++.. ......+...-...
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D-~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEE-TTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEE-CCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 3444443 5689999987765554443 45678999999888888776 3578999999876 22222233233456
Q ss_pred EEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECC--CcEEEEEeecCCCCCce
Q psy6127 311 SSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNS--DSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 311 ~~l~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~d--g~i~i~d~~~~~~~~~~ 386 (515)
..+++.+.+..|+ +-...+.|.+.|+.......... .......++++|.+..+...... +.|..+++.... ..
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---~~ 156 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IY 156 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC---eE
Confidence 7899987665554 44567899999987655443333 23457889999977666555443 678777765422 11
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
.+. .........++++|++..|+.+. ..+.|..+|+... ..+.+.........+..+++. .+.++++-...+.|.
T Consensus 157 ~~~--~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 157 SLV--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF 232 (316)
T ss_dssp EEE--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEE--ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEE
Confidence 111 11234567999999887777665 4568999998643 333332211112236778885 355555555678899
Q ss_pred EEECCCCeEEEEEc
Q psy6127 466 IWNAERGYKVCVLD 479 (515)
Q Consensus 466 iwd~~~~~~~~~~~ 479 (515)
.++..+|+.+..+.
T Consensus 233 ~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 233 SANRLTGSDVNLLA 246 (316)
T ss_dssp EEETTTCCCCEEEE
T ss_pred EEeCCCCcceEEEe
Confidence 99987776555543
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.2e-05 Score=78.92 Aligned_cols=245 Identities=10% Similarity=0.035 Sum_probs=154.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~ 302 (515)
.-.|.+..++ .+|+.+. ...|+..++........+. .......++|.+.+..++.+. ...+.|..+++..+.....
T Consensus 78 ~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D-~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 78 RRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSD-VTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp SSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEE-TTTTEEEEEETTSCCEEEE
T ss_pred CCeECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEe-CCCCcEEEEecCCCCcEEE
Confidence 3446565553 3454443 4678888887655444444 335688999999888888775 3578999999887654444
Q ss_pred ecCCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEEC-C-CcEEEEEee
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVN-S-DSIKLYDVR 378 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~-d-g~i~i~d~~ 378 (515)
+.........+++.+.+..|+ +-...+.|.+.++........+... .....++++|.+..|..... . +.|..+++.
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 443334567789988666554 4455678888888765544333322 44788999997776666543 3 567777765
Q ss_pred cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 379 SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
.... ..+. .........++++|++..|+.+. ..+.|..+|+........+... ...+..+++ ..+.++++
T Consensus 234 G~~~---~~~~--~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~---~~~P~giav-~~~~ly~t 304 (386)
T 3v65_B 234 GSGR---RIIA--DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LPHPFAITV-FEDSLYWT 304 (386)
T ss_dssp SCSC---EEEE--CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS---CSSEEEEEE-ETTEEEEE
T ss_pred CCCc---EEEE--ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC---CCCceEEEE-ECCEEEEe
Confidence 4321 1111 12233467999998777777665 4577999997644332222222 223678888 34555556
Q ss_pred EeCCCcEEEEECCCCeEEEEEcC
Q psy6127 458 GSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 458 gs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
-...+.|..++..+|+....+..
T Consensus 305 d~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp ETTTTEEEEEETTTCCSCEEEEC
T ss_pred eCCCCeEEEEECCCCcceEEEcc
Confidence 66778899999777766655543
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.4e-05 Score=71.45 Aligned_cols=209 Identities=12% Similarity=0.156 Sum_probs=138.5
Q ss_pred EecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy6127 258 TINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDL 336 (515)
Q Consensus 258 ~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~ 336 (515)
.+.+-...+..++|.|+++.+++++ ..++.|...|.. ++.++.+. +-......+++.+++.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~-d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTI-NKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEE-ETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEE-CCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4556667899999999988888877 468999999998 88777763 22356888999988877676667788999988
Q ss_pred CCCCe---EEEEec-------CCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCC-Cceeeec----CCCCCcCeEEE
Q psy6127 337 RQPNN---VGMIQL-------SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKG-PFASFKC----PGERGCEWTGL 401 (515)
Q Consensus 337 ~~~~~---~~~~~~-------~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~-~~~~~~~----~~~~~~~i~~l 401 (515)
..... ...... ......++++|.++.|.++.......+|.++..... ....... .......+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 76543 222221 122478999999988888877777777777621110 1111110 11223356799
Q ss_pred EEcCCCCE-EEEEECCCcEEEEECCCCceeEEeecccc------CCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 402 KFSPDGKL-ILVSTNGSIIRLFDAFNGNCVQSLSGVLN------NNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 402 ~~sp~~~~-l~~~s~dg~i~iwd~~~~~~~~~~~~~~~------~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
+++|.... ++....++.+..+|.. |+.+..+.-..+ .....-.++|.++|+ |+..++.+.++.+.-.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC-
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEec
Confidence 99996554 4455567788889854 666555543321 122468999999998 4445777877777643
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.4e-05 Score=84.59 Aligned_cols=281 Identities=8% Similarity=-0.059 Sum_probs=175.6
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec---------CCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN---------SKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
....|.++...++|. |..|+.++-|..++..++....... .....|.++...+++. +.+++ .++-+.
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt--~~~Gl~ 386 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGT--DGGGIN 386 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEE--BSSCEE
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEe--CCCcEE
Confidence 356799999998886 5567766678889877554322211 1235688888877765 44454 467789
Q ss_pred EEECCCCeeeEEe---cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe---cCCCeeEEEECCCCCEEE
Q psy6127 291 YLSLHDNKYVRYF---PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ---LSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 291 vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~ 364 (515)
.+|..++...... ......|.++...+++.+ ..|+.++-+..+|.++++...... ....+.++..++++.+.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE
Confidence 9998765433211 123467999998887764 446777778999987765433221 124577888888776444
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec-cccCCCCC
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG-VLNNNASP 443 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~i 443 (515)
|+. +-+..||..+..................|.++...++|... .|+.++-+..||..+++.. .+.. ..-....|
T Consensus 466 -gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i 541 (781)
T 3v9f_A 466 -GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTFGGGVGIYTPDMQLVR-KFNQYEGFCSNTI 541 (781)
T ss_dssp -EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEESSSCEEEECTTCCEEE-EECTTTTCSCSCE
T ss_pred -EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEcCCCEEEEeCCCCeEE-EccCCCCCCCCee
Confidence 555 56888887764322111100001124578899999988755 4555445888987766533 3321 11123347
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC---CCCCCeEEEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 444 LEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG---DHPSAVQSLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
.++...++|.+.++ +.+|.+..||..+++... +.. -....|.++...++|.+-+++...+..++.+
T Consensus 542 ~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~~~~-~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~ 610 (781)
T 3v9f_A 542 NQIYRSSKGQMWLA-TGEGLVCFPSARNFDYQV-FQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITS 610 (781)
T ss_dssp EEEEECTTSCEEEE-ETTEEEEESCTTTCCCEE-ECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETT
T ss_pred EEEEECCCCCEEEE-ECCCceEEECCCCCcEEE-ccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECC
Confidence 88888888886554 457755889987765332 221 1234688999999998887776557666654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.68 E-value=9.9e-05 Score=72.77 Aligned_cols=246 Identities=12% Similarity=0.044 Sum_probs=154.3
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC----eeeEEecCCCCC
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN----KYVRYFPGHVRK 309 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~----~~~~~~~~h~~~ 309 (515)
.+|+.+. ...|+..++........+. ....+..++|.+.+..++.+. ...+.|+.+++... ............
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD-~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEE-TTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEe-cCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 3555554 4689999988655444443 446788999999888888776 35788999998752 223333334456
Q ss_pred eEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEEC--CCcEEEEEeecCCCCCc
Q psy6127 310 VSSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVN--SDSIKLYDVRSYDKGPF 385 (515)
Q Consensus 310 v~~l~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~--dg~i~i~d~~~~~~~~~ 385 (515)
...+++.+.+..|+ +-...+.|.+.+++.......+. .......++++|.+..|+.... .+.|...++.....
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~--- 237 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--- 237 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---
Confidence 78999998555444 44567889999988766544443 2334788999997776666553 36788887764321
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcE
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQV 464 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I 464 (515)
..+. ...-.....++++|++..|+.+. ..+.|..+|+..... ..+............+++. .+.++++-...+.|
T Consensus 238 ~~~~--~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V 313 (400)
T 3p5b_L 238 YSLV--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 313 (400)
T ss_dssp EEEE--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSE
T ss_pred EEEE--ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeE
Confidence 1111 12224567999999888887775 457899999864433 3332211112225677773 34455555667889
Q ss_pred EEEECCCCeEEEEEcCCCCCCeEEEE
Q psy6127 465 HIWNAERGYKVCVLDGDHPSAVQSLQ 490 (515)
Q Consensus 465 ~iwd~~~~~~~~~~~~~h~~~V~~l~ 490 (515)
..+|..+|+.+..+.. ......++.
T Consensus 314 ~~~~~~~G~~~~~i~~-~~~~p~~i~ 338 (400)
T 3p5b_L 314 FSANRLTGSDVNLLAE-NLLSPEDMV 338 (400)
T ss_dssp EEEESSSCCCCEEEEC-SCSCEEEEE
T ss_pred EEEEcCCCCceEEEec-CCCCCceEE
Confidence 9999878876666553 333344443
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=5.4e-06 Score=79.29 Aligned_cols=234 Identities=11% Similarity=0.068 Sum_probs=141.0
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe-cC------------------CCCCeEEEEEcCCCCEEEE
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF-PG------------------HVRKVSSLNLSPVDDSFIS 324 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~-~~------------------h~~~v~~l~~~~~~~~l~s 324 (515)
....+++|.+++..+++.. .++.|..||..+++..... .. ....+..+++.+++..|+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSV--QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEEC--TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCCEEEEEc--CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 3456788888877566543 6889999998765433211 00 1135789999983344555
Q ss_pred EeCCCcEEEEEcCCCCeEEEEec-----CCCeeEEEECC-CCCEEEEEEC-----------------CCcEEEEEeecCC
Q psy6127 325 GSYDKTVRVWDLRQPNNVGMIQL-----SGNKPIAAYDP-EGLAFAIGVN-----------------SDSIKLYDVRSYD 381 (515)
Q Consensus 325 ~s~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~s~-~~~~l~~g~~-----------------dg~i~i~d~~~~~ 381 (515)
+...+.+..+|..+++....... ......+++++ +|+..++-.. ++.+..||..++.
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 65556688888776543222111 12357799999 9987766432 2567777765432
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCc--eeEEeeccccCCCCCEEEEEecCCCEEEEE
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGN--CVQSLSGVLNNNASPLEATFTPDSQFVASG 458 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~--~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg 458 (515)
. ..... .......++++|++++|+++. ..+.|..|++.... ....+.. ... ...++++++|++.++.
T Consensus 177 ~---~~~~~---~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 177 T---TLLLK---ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp E---EEEEE---EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEE
T ss_pred E---EEecc---CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEe
Confidence 1 11110 011234799999999776664 56889999987531 1122221 112 6789999999876665
Q ss_pred eC----------CCcEEEEECCCCeEEEEEcCCC---CCCeEEEEECCCCCEEEEeeCC--EEEEcCC
Q psy6127 459 ST----------DGQVHIWNAERGYKVCVLDGDH---PSAVQSLQFNPKYHMLASACSN--MAFWIPT 511 (515)
Q Consensus 459 s~----------dg~I~iwd~~~~~~~~~~~~~h---~~~V~~l~~sp~~~~las~~~d--v~iW~~~ 511 (515)
.. .+.|..+|. .++.+..+.... ...++.+++ .++.+.++.... +..++++
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred cCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 44 467888887 477777665421 235677777 456655554333 6666654
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.66 E-value=8.3e-05 Score=80.28 Aligned_cols=279 Identities=10% Similarity=0.039 Sum_probs=171.7
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec-------CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN-------SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS 293 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd 293 (515)
...|.++...++|.+. .|+.++-+..||..+++...... .....|.++...+++. +.+++ .+ .+.+||
T Consensus 162 ~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lwigt--~~-Gl~~~d 236 (781)
T 3v9f_A 162 SEQTWTATEAEDGKLY-IGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGN-IWIGT--SK-GLALFN 236 (781)
T ss_dssp CCCEEEEEEEETTEEE-EEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCC-EEEEE--TT-EEEEEE
T ss_pred ccceEEEEECCCCCEE-EEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCC-EEEEe--CC-cHheEC
Confidence 3568888888777554 46666568899988765433211 1135688888777665 44444 34 799999
Q ss_pred CCCCeeeEEecC-------CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe---------------cCCCe
Q psy6127 294 LHDNKYVRYFPG-------HVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ---------------LSGNK 351 (515)
Q Consensus 294 ~~~~~~~~~~~~-------h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---------------~~~~~ 351 (515)
..+++....... ....|.++...++|. |..|+..+-|.++|..++....... ....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v 315 (781)
T 3v9f_A 237 ANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASA 315 (781)
T ss_dssp TTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCE
T ss_pred CCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeE
Confidence 887765432211 245699999887776 5556665678899987765432211 12347
Q ss_pred eEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeee-------cCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy6127 352 PIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK-------CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDA 424 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~ 424 (515)
.++..+++|. +-.|+.++-|..++...... .... ........|.++...++|. |.+|+.++-+..||.
T Consensus 316 ~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~ 390 (781)
T 3v9f_A 316 RYIFQDSFNN-IWIGTWGGGINFISNAPPTF---HTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFEN 390 (781)
T ss_dssp EEEEECSSCC-EEEEEBSSCEEEECSSCCSC---EEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEET
T ss_pred EEEEEeCCCC-EEEEecCCeEEEeCCCCCcc---eeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEEC
Confidence 7888888886 45566677788888764321 1111 1112345688999988876 445676667999997
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc-CCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD-GDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
.++...............|.++...++|.+.+ |+.++-+..+|..+++...... ......|.++...+++.+.+...+
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~ 469 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHA 469 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEETT
T ss_pred CCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEECC
Confidence 65433221110111223478888887777554 6666679999988776543221 113467999999998887766554
Q ss_pred CEEEEcCC
Q psy6127 504 NMAFWIPT 511 (515)
Q Consensus 504 dv~iW~~~ 511 (515)
.+..++..
T Consensus 470 Gl~~~~~~ 477 (781)
T 3v9f_A 470 GVFVIDLA 477 (781)
T ss_dssp EEEEEESS
T ss_pred ceEEEeCC
Confidence 47777654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.63 E-value=5.3e-05 Score=69.12 Aligned_cols=205 Identities=10% Similarity=0.111 Sum_probs=134.3
Q ss_pred EecCCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCeEEEEecC--CCeeEEEECCCCCEEEEEECCCcEEEEEee
Q psy6127 302 YFPGHVRKVSSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQLS--GNKPIAAYDPEGLAFAIGVNSDSIKLYDVR 378 (515)
Q Consensus 302 ~~~~h~~~v~~l~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~ 378 (515)
.+.+-...+..++++|+++.|+ +...++.|...|.. ++..+.+... .....+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4556667899999999877555 56778899999998 8888887554 357789999888776665567788888887
Q ss_pred cCCCC-Cceeeec---CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECC---CCceeEEeec----cccCCCCCEEEE
Q psy6127 379 SYDKG-PFASFKC---PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAF---NGNCVQSLSG----VLNNNASPLEAT 447 (515)
Q Consensus 379 ~~~~~-~~~~~~~---~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~---~~~~~~~~~~----~~~~~~~i~~~~ 447 (515)
..... ....... ....+....+++|+|.++.|+++.+.....+|.+. ....+..+.. .......+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 64320 1112211 12345567899999999888887766555555543 1111222211 011223478999
Q ss_pred EecCCC-EEEEEeCCCcEEEEECCCCeEEEEEcCCC--------CCCeEEEEECCCCCEEEEeeCCEEEEc
Q psy6127 448 FTPDSQ-FVASGSTDGQVHIWNAERGYKVCVLDGDH--------PSAVQSLQFNPKYHMLASACSNMAFWI 509 (515)
Q Consensus 448 ~sp~g~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~h--------~~~V~~l~~sp~~~~las~~~dv~iW~ 509 (515)
++|... +++.......+.++|.. |+.+..+.-.. -..-..|+|.|+|++.+++-.+ .+|.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n-~~y~ 248 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN-RFYR 248 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT-EEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc-eEEE
Confidence 999755 44555566788899965 65665554311 1256899999999987776566 4443
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.8e-05 Score=78.81 Aligned_cols=244 Identities=14% Similarity=0.135 Sum_probs=144.0
Q ss_pred CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC---CCeEEEEECCCC
Q psy6127 222 DKINSLDYSS-DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV---DATLRYLSLHDN 297 (515)
Q Consensus 222 ~~I~~l~~sp-d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~---d~~v~vwd~~~~ 297 (515)
.....++++| ++..|+.+...+.|+.+|..++...... ........++|+++++.++++.... ...+.+.+. .+
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 3567889998 4556666665588999999876654433 3456688999999999777765211 113444443 23
Q ss_pred eee--EEecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCeEEEEecC--CCeeEEEECCCCCEEEEE-ECCCc
Q psy6127 298 KYV--RYFPGHVRKVSSLNLSP-VDDSFISGSYDKTVRVWDLRQPNNVGMIQLS--GNKPIAAYDPEGLAFAIG-VNSDS 371 (515)
Q Consensus 298 ~~~--~~~~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g-~~dg~ 371 (515)
... ..+. .......++++| ++..+++-..++.|..+|...+......... .....++++|+|+++... ...+.
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 221 2222 123456788999 6666666667789999999876653333322 336789999999955544 46788
Q ss_pred EEEEEeecCCCC--CceeeecC-C-----------CCCcCeE-EEEEc--------CCCCEEEEEECCCcEEEEECCCCc
Q psy6127 372 IKLYDVRSYDKG--PFASFKCP-G-----------ERGCEWT-GLKFS--------PDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 372 i~i~d~~~~~~~--~~~~~~~~-~-----------~~~~~i~-~l~~s--------p~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
|..++....... ....+... . ..-.... .++.. ++|...++-...+.|+.++ .+|.
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 999887642110 00111100 0 0011122 45553 3455555545667888888 4564
Q ss_pred eeEEeecc-----cc----------CCCCCEEEEEecC-CCEEEEEeCCCcEEEEECC
Q psy6127 429 CVQSLSGV-----LN----------NNASPLEATFTPD-SQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 429 ~~~~~~~~-----~~----------~~~~i~~~~~sp~-g~~l~sgs~dg~I~iwd~~ 470 (515)
.. .+.+. .+ .-..+..++++|+ +.++++-..++.|+.++++
T Consensus 373 v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 373 VT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 33 33221 00 0124789999995 5555555566778887754
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.9e-05 Score=77.44 Aligned_cols=244 Identities=11% Similarity=0.049 Sum_probs=143.2
Q ss_pred CcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC--CC-eEEEEECCC
Q psy6127 222 DKINSLDYSSD--GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV--DA-TLRYLSLHD 296 (515)
Q Consensus 222 ~~I~~l~~spd--~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~--d~-~v~vwd~~~ 296 (515)
.....++|+|+ +..|+.+...+.|+.+|..+++.... .........++++++++ ++++.... +. .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34678999995 44555554448999999987766544 33455689999999998 55554110 11 233333222
Q ss_pred Cee-eEEecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecC--CCeeEEEECCCCCEEEEE-ECCC
Q psy6127 297 NKY-VRYFPGHVRKVSSLNLSP-VDDSFISGSYDKTVRVWDLRQPNNVGMI-QLS--GNKPIAAYDPEGLAFAIG-VNSD 370 (515)
Q Consensus 297 ~~~-~~~~~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~--~~~~~~~~s~~~~~l~~g-~~dg 370 (515)
+.. ...+. .-.....++++| ++.+.++-..++.|+.+|..++.....+ ... .....++++|+++.|..+ ...+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 111 01111 223456788999 6666656556788999999877763332 222 123469999999955554 4567
Q ss_pred cEEEEEeecCCCCC--ceeeecC-C-----------CCCcCeEEEEE---------cCCCCEEEEEECCCcEEEEECCCC
Q psy6127 371 SIKLYDVRSYDKGP--FASFKCP-G-----------ERGCEWTGLKF---------SPDGKLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 371 ~i~i~d~~~~~~~~--~~~~~~~-~-----------~~~~~i~~l~~---------sp~~~~l~~~s~dg~i~iwd~~~~ 427 (515)
.|+.++........ ...+... . ..-.....+++ .++|.+.++-...+.|+.++. +|
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 89888865321110 0011100 0 01123567999 777766666666788999984 56
Q ss_pred ceeEEeecccc---------------CCCCCEEEEEe-cCCCEEEEEeCCCcEEEEECC
Q psy6127 428 NCVQSLSGVLN---------------NNASPLEATFT-PDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 428 ~~~~~~~~~~~---------------~~~~i~~~~~s-p~g~~l~sgs~dg~I~iwd~~ 470 (515)
.. ..+.+... .-..+..++++ ++|.++++-..++.|+.++++
T Consensus 375 ~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 RV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 43 33332211 11236789999 566655555566788887764
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.54 E-value=4.1e-05 Score=79.33 Aligned_cols=195 Identities=13% Similarity=0.085 Sum_probs=119.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCce---------eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGV---------DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF 303 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~ 303 (515)
+..++.++.++.|.-+|.++|+.+..+....... ..++. .+..+++++ .++.+..+|.++|+.+...
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t--~dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGT--LDASVVALNKNTGKVVWKK 143 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEE--TTTEEEEEESSSCCEEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEe--CCCEEEEEECCCCCEEeee
Confidence 3456666664559999999999988775442210 11222 245566554 6999999999999988765
Q ss_pred cCCCC----CeE-EEEEcC---CCC-EEEEEe------CCCcEEEEEcCCCCeEEEEecCCC------------------
Q psy6127 304 PGHVR----KVS-SLNLSP---VDD-SFISGS------YDKTVRVWDLRQPNNVGMIQLSGN------------------ 350 (515)
Q Consensus 304 ~~h~~----~v~-~l~~~~---~~~-~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~------------------ 350 (515)
..... .+. ...... +++ .++.++ .++.|.-+|.++|+.+-.......
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 43220 111 111111 233 566655 378999999999998876543210
Q ss_pred ------------------------eeEEEECCCCCEEEEEEC--------------------C----CcEEEEEeecCCC
Q psy6127 351 ------------------------KPIAAYDPEGLAFAIGVN--------------------S----DSIKLYDVRSYDK 382 (515)
Q Consensus 351 ------------------------~~~~~~s~~~~~l~~g~~--------------------d----g~i~i~d~~~~~~ 382 (515)
-...+++|+...++.+.. | +.|..+|.++++.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 012466777778887763 2 5788888887652
Q ss_pred CCceeeecCCCC--------CcCeEEEEEc-CCCC---EEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 383 GPFASFKCPGER--------GCEWTGLKFS-PDGK---LILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 383 ~~~~~~~~~~~~--------~~~i~~l~~s-p~~~---~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
.- .... ..+ ..++ -+... .+|+ .++.++.+|.++++|..+|+.+.....
T Consensus 304 ~W--~~q~-~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 304 KW--FYQH-TPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp EE--EEES-STTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EE--EEeC-CCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 21 1111 111 1222 12222 4674 778899999999999999998766543
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.49 E-value=0.00011 Score=69.86 Aligned_cols=234 Identities=11% Similarity=0.061 Sum_probs=143.5
Q ss_pred EEEEEeCCCeEEEEECCCCe-eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee-EEecCCCCCeEE
Q psy6127 235 LLISCSDDDQIIIYDCEQGT-SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV-RYFPGHVRKVSS 312 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~-~~~~~h~~~v~~ 312 (515)
+|+.+. ...|+..++.... ....+.........++|.+.+..++.+- ...+.|..+++..+... ..+...-.....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D-~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSD-VSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEE-TTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEE-CCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 344433 4678999988653 1111111224567899999888887775 35789999998766321 122222245678
Q ss_pred EEEcCCCCEE-EEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEEC--CCcEEEEEeecCCCCCceee
Q psy6127 313 LNLSPVDDSF-ISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVN--SDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 313 l~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~--dg~i~i~d~~~~~~~~~~~~ 388 (515)
+++.+.+..| ++-...+.|.++++......... ........++++|.+..++.... .+.|..+++..... ..+
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~ 160 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR---FII 160 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC---EEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe---EEE
Confidence 8998755544 44456688999998765443333 22344778999997766666653 46777777654221 111
Q ss_pred ecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 389 KCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 389 ~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
. ...-.....++++|++..|+.+. ..+.|..+|+.... .+.+.. .....+..+++.. +.++.+-...+.|..+
T Consensus 161 ~--~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~--~~~~~P~glav~~-~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 161 I--NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVK--GSLPHPFALTLFE-DILYWTDWSTHSILAC 234 (318)
T ss_dssp E--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC--SCCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred E--ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEec--CCCCCceEEEEeC-CEEEEEecCCCeEEEE
Confidence 1 11223457999999877777665 46789999986433 233321 1122367788763 3455555567889999
Q ss_pred ECCCCeEEEEEc
Q psy6127 468 NAERGYKVCVLD 479 (515)
Q Consensus 468 d~~~~~~~~~~~ 479 (515)
+..+|+....+.
T Consensus 235 ~~~~G~~~~~i~ 246 (318)
T 3sov_A 235 NKYTGEGLREIH 246 (318)
T ss_dssp ETTTCCSCEEEE
T ss_pred ECCCCCceEEEe
Confidence 987776555443
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.47 E-value=0.00059 Score=65.17 Aligned_cols=272 Identities=11% Similarity=0.099 Sum_probs=148.5
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec----CCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN----SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~ 296 (515)
...+.++.|.+++..+++ +.+|.| +...+.|+.-.... .....+..+.|.+ ..+++++ ..+.|.. ..+.
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g--~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVG--EPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEE--ETTEEEE-ESST
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEE--CCCeEEE-ECCC
Confidence 457999999887777774 566765 33333343222221 1244688899876 3444443 3665544 3333
Q ss_pred CeeeEEec---CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe--cCCCeeEEEECCCCCEEEEEECCCc
Q psy6127 297 NKYVRYFP---GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ--LSGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 297 ~~~~~~~~---~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
++.-.... .+...+..+.+.+++..++.+ .++.|.. ..+.++.-.... ....+..+.+.|++.+++++. +|.
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~ 184 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGS 184 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSS
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCc
Confidence 43322222 234567888887766655544 4565432 223344433332 234577889999988887664 444
Q ss_pred EEE-EEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc-ccCCCCCEEEEEe
Q psy6127 372 IKL-YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV-LNNNASPLEATFT 449 (515)
Q Consensus 372 i~i-~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~s 449 (515)
+.. .|-. ........ ......+..+.++|++..+ .++.+|.+++.+...++.-..+... ......+..+++.
T Consensus 185 ~~~S~d~g---G~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 185 FYSTWEPG---QTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp EEEEECTT---CSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred EEEEeCCC---CCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 433 2210 11111222 2234567889999998765 4556787777643334433322211 1112237888999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEEcC--CCCCCeEEEEECCCCCEEEEeeCCEEEEcCC
Q psy6127 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDG--DHPSAVQSLQFNPKYHMLASACSNMAFWIPT 511 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~sp~~~~las~~~dv~iW~~~ 511 (515)
+++.+++++. +|.+ ++..+.|+.-..+.. .....+.++.|.+++.+++.+ .+..|+..+
T Consensus 259 ~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i~~~~ 319 (327)
T 2xbg_A 259 TPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG-QKGILLRYV 319 (327)
T ss_dssp SSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC-STTEEEEEC
T ss_pred CCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc-CCceEEEEc
Confidence 8888777654 6766 445555544333331 134567889998766655544 444555443
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=98.46 E-value=0.0016 Score=72.58 Aligned_cols=283 Identities=12% Similarity=0.075 Sum_probs=158.9
Q ss_pred CCcEEEEEEcCC------CCEEEEEeC-CCeEEEEECCCCeeeeEecCC-CCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 221 TDKINSLDYSSD------GSLLISCSD-DDQIIIYDCEQGTSKNTINSK-KYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 221 ~~~I~~l~~spd------~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
...|.|+++.|. ++++|.|.. |++++|+++.+.+.+....-. .....++.+..-+...++..|-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 568999999863 479999996 999999999876665433221 123344443322223333333468887655
Q ss_pred EC--CCCeeeE---EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE-EEecCCCeeEEEECCC--CCEEE
Q psy6127 293 SL--HDNKYVR---YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG-MIQLSGNKPIAAYDPE--GLAFA 364 (515)
Q Consensus 293 d~--~~~~~~~---~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~s~~--~~~l~ 364 (515)
.+ .+|+... .+-| ..++.-..+...+..-+.+..+....++--+ ++... .+....-.....|+.. .+-++
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v 710 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLA 710 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEE
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccChHHhceEeccCcccCCCcEE
Confidence 54 4444331 2333 3456555555545533334445555555433 22221 1122221234455442 23455
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC----------------------------
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG---------------------------- 416 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d---------------------------- 416 (515)
.. .++.++|..+.....-..+.+. -...++.++++|+.+.++.+..+
T Consensus 711 ~~-~~~~LrI~~i~~~~~~~~~~ip----L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1158)
T 3ei3_A 711 LA-NNSTLTIGTIDEIQKLHIRTVP----LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS 785 (1158)
T ss_dssp EE-CSSCEEEEEECCSSSEEEEEEE----CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred EE-cCCceEEEEecccCCeeEEEEe----CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence 44 4566999988654322122222 12356788898877765544311
Q ss_pred ---------------------CcEEEEECCCCceeEEeeccccCCCCCEEEE---EecC-CCEEEEEe----------CC
Q psy6127 417 ---------------------SIIRLFDAFNGNCVQSLSGVLNNNASPLEAT---FTPD-SQFVASGS----------TD 461 (515)
Q Consensus 417 ---------------------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~---~sp~-g~~l~sgs----------~d 461 (515)
+.+++.|..+.+.+..+.-..+. .+.+++ |..+ ..++++|+ ..
T Consensus 786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE--~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~ 863 (1158)
T 3ei3_A 786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNE--YALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQ 863 (1158)
T ss_dssp CCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTE--EEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCC
T ss_pred cccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCc--ceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCc
Confidence 23667777777666555432221 244444 3322 46888886 34
Q ss_pred CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcCCCC
Q psy6127 462 GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513 (515)
Q Consensus 462 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~~~~ 513 (515)
|.|++|++..++..........++|++++-- +|+++|+.+..+++|++...
T Consensus 864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~ 914 (1158)
T 3ei3_A 864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTE 914 (1158)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTT
T ss_pred eEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCC
Confidence 7899999976554443333357889998744 45777777777999998754
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.45 E-value=2.4e-05 Score=83.95 Aligned_cols=244 Identities=9% Similarity=0.034 Sum_probs=133.1
Q ss_pred cccCC-cEEEEEEc-CCCCEEEEEeC-C----CeEEEEECCCC-eeee-EecCCCCceeEEEEecCCCeEEEEEeeCC--
Q psy6127 218 RENTD-KINSLDYS-SDGSLLISCSD-D----DQIIIYDCEQG-TSKN-TINSKKYGVDLIKFTHSKTTAIHASTKVD-- 286 (515)
Q Consensus 218 ~~h~~-~I~~l~~s-pd~~~lasgs~-d----g~i~iwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~~~d-- 286 (515)
++|.- .+...+|| |||++||.+.. + .+|+++|+.++ +.+. .+. .....++|+||++.+++......
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCC
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCC
Confidence 34553 68889999 99999886543 2 25999999988 6321 111 12346889999999888763222
Q ss_pred -CeEEEEECCCCee--eEEec-CCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCC-eE--EEE-ec-CCCeeEE
Q psy6127 287 -ATLRYLSLHDNKY--VRYFP-GHVRKVSSLNLSPVDDSFISGSY---DKTVRVWDLRQPN-NV--GMI-QL-SGNKPIA 354 (515)
Q Consensus 287 -~~v~vwd~~~~~~--~~~~~-~h~~~v~~l~~~~~~~~l~s~s~---dg~i~iwd~~~~~-~~--~~~-~~-~~~~~~~ 354 (515)
..|+++++.++.. ...+. .+......+.|+|||++|+..+. ...|.++|+.++. .. ..+ .. ......+
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3688889877642 22332 23345678899999998876653 3468888998763 12 333 21 2223334
Q ss_pred EECCCCCEEEEEEC-C--C--cEEEEEeecCCCCCcee-eecCCCCCcCeEEEEEcCCCCEE-EEEECCCc--EEEEEC-
Q psy6127 355 AYDPEGLAFAIGVN-S--D--SIKLYDVRSYDKGPFAS-FKCPGERGCEWTGLKFSPDGKLI-LVSTNGSI--IRLFDA- 424 (515)
Q Consensus 355 ~~s~~~~~l~~g~~-d--g--~i~i~d~~~~~~~~~~~-~~~~~~~~~~i~~l~~sp~~~~l-~~~s~dg~--i~iwd~- 424 (515)
.|+. |+.|+..+. + + .|..+|+.+.. .... +. .......+..+.+. ++.| ++...++. +.++++
T Consensus 326 ~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~--~~~~~li-~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl~ 399 (751)
T 2xe4_A 326 QMHG-TSHLVILTNEGGAVNHKLLIAPRGQPS--DWSHVLV-DHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMAD 399 (751)
T ss_dssp EEET-TTEEEEEECTTTCTTCEEEEEETTSTT--CCCCEEE-CCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEECC
T ss_pred eeee-CCEEEEEeCCCCCCCcEEEEEcCCCcc--cceeeEE-CCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEecc
Confidence 4333 555555443 3 3 44445544311 1111 11 11222234455554 4444 45556665 555665
Q ss_pred ------CCCceeEEeeccccCCCCCEEEEE------ecCCC-EEEEEeCC---CcEEEEECCCCeE
Q psy6127 425 ------FNGNCVQSLSGVLNNNASPLEATF------TPDSQ-FVASGSTD---GQVHIWNAERGYK 474 (515)
Q Consensus 425 ------~~~~~~~~~~~~~~~~~~i~~~~~------sp~g~-~l~sgs~d---g~I~iwd~~~~~~ 474 (515)
..++....+... .. .....+ ++++. ++++.+.. +.++.+|+.+++.
T Consensus 400 ~~~~~~~~g~~~~~l~l~--~~--~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 400 SQDGVFKAGTGLREVVME--EP--IFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp TTTSCCCTTTCCEECCCC--CS--SCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred cccccccCCccceEECCC--Cc--eeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 333313333211 11 122334 34554 44444332 4677888877653
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.45 E-value=6.3e-05 Score=74.93 Aligned_cols=237 Identities=11% Similarity=0.090 Sum_probs=139.3
Q ss_pred ceeEEEEec-CCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC-C----cEEEEEcCC
Q psy6127 265 GVDLIKFTH-SKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD-K----TVRVWDLRQ 338 (515)
Q Consensus 265 ~v~~~~~~~-~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-g----~i~iwd~~~ 338 (515)
....++++| ++..++++. ..+.|+.+|+.++....... .......++|+++++.|+.+... + .+...+. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d--~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVG--EQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEE--BTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEe--CCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 457889998 466666665 23899999998776544433 45668899999999966666542 2 2333443 3
Q ss_pred CCeE--EEEecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-
Q psy6127 339 PNNV--GMIQLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST- 414 (515)
Q Consensus 339 ~~~~--~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s- 414 (515)
+... ..+........++++| ++.++++-..++.|..++...... ..+... ........++|+|+|++|+.+.
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~---~~~~~~-~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET---TPLFTI-QDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE---EEEEEC-SSSSCCEEEEECTTSSEEEEEET
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE---EEEEEc-CCCCcceeEEEcCCCCEEEEEEC
Confidence 3222 2333333467789999 677666666778899998865321 011111 1123456899999999666655
Q ss_pred CCCcEEEEECCC--Cce--eEEeecccc------------CCCCCE-EEEEe--------cCCCEEEEEeCCCcEEEEEC
Q psy6127 415 NGSIIRLFDAFN--GNC--VQSLSGVLN------------NNASPL-EATFT--------PDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 415 ~dg~i~iwd~~~--~~~--~~~~~~~~~------------~~~~i~-~~~~s--------p~g~~l~sgs~dg~I~iwd~ 469 (515)
..+.|..++... ++. ...+.+... .-.... .++.. ++|.+.++-...+.|+.++
T Consensus 290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~- 368 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT- 368 (430)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-
T ss_pred CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-
Confidence 567888887643 221 222222100 011133 45553 3455555555677899998
Q ss_pred CCCeEEEEEcCC---C-------------CCCeEEEEECCC-CCEEEEeeCC--EEEEcC
Q psy6127 470 ERGYKVCVLDGD---H-------------PSAVQSLQFNPK-YHMLASACSN--MAFWIP 510 (515)
Q Consensus 470 ~~~~~~~~~~~~---h-------------~~~V~~l~~sp~-~~~las~~~d--v~iW~~ 510 (515)
.+|+.....-.. . -.....++++|+ +.++++-.++ ++..++
T Consensus 369 ~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 369 PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 456544333110 0 125789999995 5555554444 555443
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=0.0022 Score=66.81 Aligned_cols=281 Identities=9% Similarity=0.033 Sum_probs=156.6
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSD--DDQIIIYDCEQGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~--dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
+.-.....|++.|.+.+|+.+.. .+.|...++. |.....+ ...-.....+++.+++..++.+- ...+.|...|++
T Consensus 124 ~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD-~~~~~I~~~~~d 201 (619)
T 3s94_A 124 QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWAD-AKLNFIHKSNLD 201 (619)
T ss_dssp SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEE-TTTCCEEEESSS
T ss_pred CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEe-CCCCeEEEecCC
Confidence 34455778999997666655543 3567777765 4333333 33445678999999998888886 357889999987
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-----------------C---------
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-----------------G--------- 349 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------------~--------- 349 (515)
.........+.-.....+++..+ ..+++-...+.|...|..+++....+... .
T Consensus 202 G~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng 280 (619)
T 3s94_A 202 GTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNG 280 (619)
T ss_dssp CCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGG
T ss_pred CCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCC
Confidence 65443333222223346677654 33344345678888888776543332110 0
Q ss_pred CeeEEEE-----------CCCC--------------C-EEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEE
Q psy6127 350 NKPIAAY-----------DPEG--------------L-AFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF 403 (515)
Q Consensus 350 ~~~~~~~-----------s~~~--------------~-~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~ 403 (515)
....+|+ .|.| . +|+.+ ..+.|+..++...... ....+...-..+.+++|
T Consensus 281 ~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~---~~~~~~~~l~~~~~ld~ 356 (619)
T 3s94_A 281 GCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA-RRTDLRRISLDTPDFT---DIVLQLEDIRHAIAIDY 356 (619)
T ss_dssp GCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEE-ESSCEEEEESSSTTCC---CEECCCSCCSSEEEEEE
T ss_pred cccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEE-cccceEEEecCCCccc---eeEEeccccCccEEEEE
Confidence 0000111 1111 1 22222 3456666666543321 11111122334668999
Q ss_pred cCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE-EEeCCCcEEEEECCCCeEEEEEcCC
Q psy6127 404 SPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA-SGSTDGQVHIWNAERGYKVCVLDGD 481 (515)
Q Consensus 404 sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~ 481 (515)
++.+..|+.+. ..+.|+.++.........+.. ....+..+++.+.+..|+ +-+..+.|.+.++........+..
T Consensus 357 d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~---~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~- 432 (619)
T 3s94_A 357 DPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA---QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISE- 432 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT-
T ss_pred EcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC---CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEEC-
Confidence 99766666655 577899998765443333322 222367899997555454 445668899999875533222322
Q ss_pred CCCCeEEEEECCC-CCEEEEeeCC-EEEEcC
Q psy6127 482 HPSAVQSLQFNPK-YHMLASACSN-MAFWIP 510 (515)
Q Consensus 482 h~~~V~~l~~sp~-~~~las~~~d-v~iW~~ 510 (515)
.-....++++.|. |.+..+-.+. -+|+..
T Consensus 433 ~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~ 463 (619)
T 3s94_A 433 DLEEPRAIVLDPMVGYMYWTDWGEIPKIERA 463 (619)
T ss_dssp TCCSEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCCCeeeEEEEcCCCcEEEecCCCCCEEEEE
Confidence 4456889999996 5554543232 455543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.5e-05 Score=82.71 Aligned_cols=197 Identities=11% Similarity=0.064 Sum_probs=111.9
Q ss_pred ceeEEEEe-cCCCeEEEEEeeCC----CeEEEEECCCC-eeeEE-ecCCCCCeEEEEEcCCCCEEEEEeCC-----CcEE
Q psy6127 265 GVDLIKFT-HSKTTAIHASTKVD----ATLRYLSLHDN-KYVRY-FPGHVRKVSSLNLSPVDDSFISGSYD-----KTVR 332 (515)
Q Consensus 265 ~v~~~~~~-~~~~~l~~~s~~~d----~~v~vwd~~~~-~~~~~-~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~ 332 (515)
.+...+|+ |||+.++++.. .+ ..|+++|+.++ +.+.. +. .....++|+|||+.|+....| ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~-~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVD-MSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEE-SSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEe-CCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 57789999 99999888763 33 35999999998 63211 11 123468899999988777665 3588
Q ss_pred EEEcCCCCe--EEEEec--CCCeeEEEECCCCCEEEEEEC---CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC
Q psy6127 333 VWDLRQPNN--VGMIQL--SGNKPIAAYDPEGLAFAIGVN---SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP 405 (515)
Q Consensus 333 iwd~~~~~~--~~~~~~--~~~~~~~~~s~~~~~l~~g~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp 405 (515)
.+++.++.. ...+.. ......+.|+|||++|+..+. ...|.++|+.+..... ..............++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~-~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHN-TLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCC-CEEESSCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCc-eeEEeecCCCCceEEEeeee
Confidence 888887642 233322 223456889999999887663 3467778877642111 00111122233444555544
Q ss_pred CCCEEEEEE-CC----CcEEEEECCCCceeEE-eeccccCCCCCEEEEEecCCCEEEEEeCCCc--EEEEEC
Q psy6127 406 DGKLILVST-NG----SIIRLFDAFNGNCVQS-LSGVLNNNASPLEATFTPDSQFVASGSTDGQ--VHIWNA 469 (515)
Q Consensus 406 ~~~~l~~~s-~d----g~i~iwd~~~~~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~--I~iwd~ 469 (515)
|+.|+..+ .+ ..|..+++.++..... +..+.. ...+..+.+. .+.++++...+|. ++++++
T Consensus 330 -g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~-~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 330 -TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSE-DVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp -TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCS-SEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred -CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCC-CcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 55554444 33 2566777765322222 222211 1113344443 2334556666775 555665
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=0.0018 Score=61.42 Aligned_cols=210 Identities=12% Similarity=0.039 Sum_probs=131.7
Q ss_pred CCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCC----CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 221 TDKINSLDYSSDGSLLISC-SDDDQIIIYDCEQ----GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasg-s~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
...+..++|++++..|+.+ ..++.|..++... ......+...-.....+++.+.+..++++. ...+.|.+.+..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d-~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEE-CCCCEEEEEeCC
Confidence 4567899999866555544 4568999999875 222222333334568899998777777765 357899999987
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC--CcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEE-CCCc
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD--KTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGV-NSDS 371 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d--g~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~-~dg~ 371 (515)
...........-.....+++.|.+..|+.+... +.|...++.......... .-.....++++|++..|..+. ..+.
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 554333333334567899999977766655543 678888876443322222 123467899999877776655 5578
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
|..+|+..... ..+...........++++. .+..+++-...+.|..++..+++....+..
T Consensus 188 I~~~d~dg~~~---~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 188 ISSIDVNGGNR---KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EEEEETTSCSC---EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEEecCCCce---EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 99999864321 1221111122334578885 344444555678899999878876666543
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.35 E-value=0.00055 Score=66.04 Aligned_cols=207 Identities=8% Similarity=0.040 Sum_probs=133.4
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 222 DKINSLDYSSDGSLLISC-SDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasg-s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
..+..++|++.+..|+.+ ...+.|..++...+.....+.........+++.+.+..++.+. ...+.|.+.+++.....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d-~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD-SGTSRIEVANLDGAHRK 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEc-CCCCeEEEEcCCCCceE
Confidence 457899999866555544 4678899999886554444443445567899998888887765 35789999998755433
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeC-C-CcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEE-CCCcEEEEE
Q psy6127 301 RYFPGHVRKVSSLNLSPVDDSFISGSY-D-KTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGV-NSDSIKLYD 376 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~~l~s~s~-d-g~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d 376 (515)
......-.....+++.|.+..|+.+.. . +.|..+++........... -.....++++|++..|..+. ..+.|..+|
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 334444456799999997766555543 4 7788888765433322221 23367899998777666654 467788888
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
+..... ..+. ........++++. .+...++-...+.|..++..+|+....+..
T Consensus 232 ~dG~~~---~~~~--~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 232 LDGSHR---KAVI--SQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp TTSCSC---EEEE--CSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCCce---EEEE--eCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 765321 1111 1112345578883 444444445677888888777776666653
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.32 E-value=0.00043 Score=67.85 Aligned_cols=208 Identities=8% Similarity=0.042 Sum_probs=134.9
Q ss_pred CCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 221 TDKINSLDYSSDGSLLI-SCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 221 ~~~I~~l~~spd~~~la-sgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
...+..++|++.+..|+ +-...+.|..++...+.....+.........+++.+.+..++++- ...+.|.+.+++....
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d-~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD-SGTSRIEVANLDGAHR 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE-TTTTEEEECBTTSCSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc-CCCCeEEEEeCCCCce
Confidence 34578999998655555 444678999999886554444443444567889998888887765 3577899998875544
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEeC-C-CcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEE-CCCcEEEE
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGSY-D-KTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGV-NSDSIKLY 375 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s~-d-g~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~-~dg~i~i~ 375 (515)
...+...-.....+++.|.+..|+.+.. . +.|..+++........... -.....++++|++..|..+. ..+.|..+
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 3344444467899999997776665544 3 6788888875544333322 22367899998777666654 46778888
Q ss_pred EeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
|+..... ..+. ........++++. .+..+++-...+.|..++..+|+....+..
T Consensus 274 d~dG~~~---~~~~--~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 274 NLDGSHR---KAVI--SQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp CTTSCSC---EEEE--CSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred eCCCCee---EEEE--ECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 8764221 1111 1112345578883 444444555678899998777877666654
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.31 E-value=0.00052 Score=68.70 Aligned_cols=243 Identities=11% Similarity=0.051 Sum_probs=143.2
Q ss_pred ceeEEEEec-CCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC---CCCeEEEEE-------cCCCCEEEEEeCCC----
Q psy6127 265 GVDLIKFTH-SKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH---VRKVSSLNL-------SPVDDSFISGSYDK---- 329 (515)
Q Consensus 265 ~v~~~~~~~-~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h---~~~v~~l~~-------~~~~~~l~s~s~dg---- 329 (515)
....++|.| ++..++++. ...+.|++.|.+++......... ......++| +++++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~-~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICY-DGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEE-ETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEE-CCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 467899999 466666665 33568999999887766544332 235899999 99999777766554
Q ss_pred ---cEEEEEcCC-CCeE-----EEEecCCCeeEEEECCC-CCEEEEEECCCcEEEEEee-------cCCC-CC-------
Q psy6127 330 ---TVRVWDLRQ-PNNV-----GMIQLSGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVR-------SYDK-GP------- 384 (515)
Q Consensus 330 ---~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~-------~~~~-~~------- 384 (515)
.|.+++... +... ..+........++++|+ +.++++-..++.|..+|+. ++.. .+
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266666443 2221 22222223567889994 5555566678889999997 3332 00
Q ss_pred -ceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEEC--CCCce--eEEeecccc------------CCCCCE-E
Q psy6127 385 -FASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDA--FNGNC--VQSLSGVLN------------NNASPL-E 445 (515)
Q Consensus 385 -~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~--~~~~~--~~~~~~~~~------------~~~~i~-~ 445 (515)
...+.. .........++|+|+|++|+.+. ..+.|+.++. ..+.. ...+.+... .-..+. .
T Consensus 299 ~~~~l~~-~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 299 TFKQLFT-IADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TEEEEEE-CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred ccceeEe-cCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 011111 12233456899999999766655 5678888654 33322 122322110 011234 4
Q ss_pred EEEe-------cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC-----------------------CCCCeEEEEECCC-
Q psy6127 446 ATFT-------PDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-----------------------HPSAVQSLQFNPK- 494 (515)
Q Consensus 446 ~~~s-------p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-----------------------h~~~V~~l~~sp~- 494 (515)
++.. ++|.++++-...+.|+.++ .+|... ++-+. .-.....|+++++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~-TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVS-TYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEE-EEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEE-EEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 4554 4566666666778999999 466433 33221 0124678999997
Q ss_pred CCEEEEeeCC--EEEEcCC
Q psy6127 495 YHMLASACSN--MAFWIPT 511 (515)
Q Consensus 495 ~~~las~~~d--v~iW~~~ 511 (515)
+.+.++-.++ ||.++++
T Consensus 456 g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEECC
Confidence 6655554454 5555544
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.31 E-value=0.0019 Score=63.46 Aligned_cols=211 Identities=12% Similarity=0.048 Sum_probs=136.4
Q ss_pred cCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCC----eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 220 NTDKINSLDYSSDGSLLISC-SDDDQIIIYDCEQG----TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasg-s~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
....+..++|++.+..|+.+ ...+.|+.+++... .....+.........+++.+.+..++.+- ...+.|.+.++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d-~~~~~I~~~~~ 188 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVLGTVSVADT 188 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE-TTTTEEEEECT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE-CCCCeEEEEeC
Confidence 45678899999866555554 45688999988752 23333443445678899998777777775 45789999998
Q ss_pred CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEE-CCC
Q psy6127 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGV-NSD 370 (515)
Q Consensus 295 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~-~dg 370 (515)
+.......+...-.....+++.|.+..|+.+.. .+.|...++............ .....+++++++..|..+. ..+
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 766544444444456889999997776666553 378888888765444333322 3477899999877777665 467
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
.|..+|+..... ..+...........++++. .+..+++-...+.|..+|..+|+.+..+..
T Consensus 269 ~I~~~d~dG~~~---~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 269 SISSIDVNGGNR---KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EEEEEETTSCCC---EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred EEEEEeCCCCcc---EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 888888865321 1221111122234477773 333444555678899999888877766653
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.31 E-value=0.00018 Score=71.64 Aligned_cols=238 Identities=11% Similarity=0.089 Sum_probs=139.9
Q ss_pred ceeEEEEecC--CCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcC
Q psy6127 265 GVDLIKFTHS--KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK-----TVRVWDLR 337 (515)
Q Consensus 265 ~v~~~~~~~~--~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg-----~i~iwd~~ 337 (515)
....++|.|+ +..++++. ..+.|+.+|..+++..... ........++++++|+ |+.+...+ .+...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D--~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVG--QRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEEC--BTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEe--CCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 4678999985 55566554 2389999999887765543 3455689999999999 44444321 23333332
Q ss_pred CCCe-EEEEecCCCeeEEEECC-CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-
Q psy6127 338 QPNN-VGMIQLSGNKPIAAYDP-EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST- 414 (515)
Q Consensus 338 ~~~~-~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s- 414 (515)
.+.. ...+........++++| +|.++++-..++.|+.+|..++.. ...+..... ...-..++|+|++++|+.+.
T Consensus 216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~--~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL--TEEEVMMDT-KGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE--EEEEEECSC-CSSCEEEEECTTSSEEEEEET
T ss_pred CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE--EEEEeccCC-CCCcccEEEeCCCCEEEEEeC
Confidence 2211 12222233466789999 677666665678888888764331 011111111 12234799999999666665
Q ss_pred CCCcEEEEECC--CCce--eEEeecccc------------CCCCCEEEEE---------ecCCCEEEEEeCCCcEEEEEC
Q psy6127 415 NGSIIRLFDAF--NGNC--VQSLSGVLN------------NNASPLEATF---------TPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 415 ~dg~i~iwd~~--~~~~--~~~~~~~~~------------~~~~i~~~~~---------sp~g~~l~sgs~dg~I~iwd~ 469 (515)
..+.|+.++.. ++.. ...+.+... .-.....+++ .++|.+.++-...+.|+.++.
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 46789998865 3321 122222100 1123577999 677777776667788999985
Q ss_pred CCCeEEEEEcCCC----------------CCCeEEEEEC-CCCCEEEEeeCC--EEEEcC
Q psy6127 470 ERGYKVCVLDGDH----------------PSAVQSLQFN-PKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 470 ~~~~~~~~~~~~h----------------~~~V~~l~~s-p~~~~las~~~d--v~iW~~ 510 (515)
+|......-... -.....|+++ +++.++++-.++ |+..++
T Consensus 373 -~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 373 -EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp -TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 665443331100 1237799999 566666654444 554443
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=98.30 E-value=0.0004 Score=65.77 Aligned_cols=200 Identities=14% Similarity=0.213 Sum_probs=132.0
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecC----CCe--EEEEEeeC--CCeEEEEEC--CCCeee
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS----KTT--AIHASTKV--DATLRYLSL--HDNKYV 300 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~~~s~~~--d~~v~vwd~--~~~~~~ 300 (515)
|...+++.....+-+.+||+ +|+.+..+.. +.++.+..-|. +.. +++++... +++|.+|++ .++. +
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred CCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 34455666667788999999 7999888864 45666666552 222 55666545 689999976 3443 4
Q ss_pred EEecC------CC-CCeEEEEE--cCC-CC-EEEEEeCCCcEEEEEcC-------CCCeEEEEecCCCeeEEEECCCCCE
Q psy6127 301 RYFPG------HV-RKVSSLNL--SPV-DD-SFISGSYDKTVRVWDLR-------QPNNVGMIQLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 301 ~~~~~------h~-~~v~~l~~--~~~-~~-~l~s~s~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~s~~~~~ 362 (515)
..+.. .. ..+..+++ +|. ++ +++....+|.+..|++. +.+.++.+...+.+..+..++....
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 44421 11 45667777 664 44 67888889999999882 3456778888888999999999999
Q ss_pred EEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEEEE--cCCCC-EEEEEE-CCCcEEEEECC-CCceeEEee
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGLKF--SPDGK-LILVST-NGSIIRLFDAF-NGNCVQSLS 434 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l~~--sp~~~-~l~~~s-~dg~i~iwd~~-~~~~~~~~~ 434 (515)
|..+-++.-|..|+.+.........+.. ...-...+..+++ .++++ ||++++ .+++..+||.. +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999888665555544322111112221 1222335778888 45555 777777 56799999986 666666664
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00028 Score=70.64 Aligned_cols=252 Identities=13% Similarity=0.132 Sum_probs=146.9
Q ss_pred cEEEEEEcC-CCCEEEEE-eCCCeEEEEECCCCeeeeEecCC---CCceeEEEE-------ecCCCeEEEEEeeCC----
Q psy6127 223 KINSLDYSS-DGSLLISC-SDDDQIIIYDCEQGTSKNTINSK---KYGVDLIKF-------THSKTTAIHASTKVD---- 286 (515)
Q Consensus 223 ~I~~l~~sp-d~~~lasg-s~dg~i~iwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~s~~~d---- 286 (515)
....|+|+| ++..|+.+ ...+.|++.|.+++......... ......++| ++++..++++.- .+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~-~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID-YDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC-CCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC-CCCCcc
Confidence 568899999 34444444 44477999999877666554432 235889999 999998777752 22
Q ss_pred --CeEEEEECCC-Ceee-----EEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcC-------CCCe---------
Q psy6127 287 --ATLRYLSLHD-NKYV-----RYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLR-------QPNN--------- 341 (515)
Q Consensus 287 --~~v~vwd~~~-~~~~-----~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~-------~~~~--------- 341 (515)
..|.+++... +... ..+.. -.....++++|++. ++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 1366776443 2221 12211 12345778899554 55556677889999987 5543
Q ss_pred --E-EEEec--CCCeeEEEECCCCCEEEEE-ECCCcEEEEEeecCCCCC--ceeeecC-C--C---------CCcCeE-E
Q psy6127 342 --V-GMIQL--SGNKPIAAYDPEGLAFAIG-VNSDSIKLYDVRSYDKGP--FASFKCP-G--E---------RGCEWT-G 400 (515)
Q Consensus 342 --~-~~~~~--~~~~~~~~~s~~~~~l~~g-~~dg~i~i~d~~~~~~~~--~~~~~~~-~--~---------~~~~i~-~ 400 (515)
. ..+.. ......++|+|+|+.|..+ +..+.|+.++........ ...+.-. . + .-.... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 1 22222 2335689999999965544 466788887765422100 0011100 0 0 111233 4
Q ss_pred EEEc-------CCCCEEEEEECCCcEEEEECCCCceeEEeeccc--------------c-------CCCCCEEEEEecC-
Q psy6127 401 LKFS-------PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL--------------N-------NNASPLEATFTPD- 451 (515)
Q Consensus 401 l~~s-------p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~--------------~-------~~~~i~~~~~sp~- 451 (515)
++.. +++.+.++=...+.|+.++ .+|. +.++.+.. . .-..+..++++++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 5554 4566555555678899998 5664 44444321 0 0123678999997
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYKVCVL 478 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~~~~~ 478 (515)
|.++++=..++.|+.++++...+....
T Consensus 456 g~lyVaD~~N~rIrki~~~~~~~~~~~ 482 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTISMEQEENVAGD 482 (496)
T ss_dssp TEEEEEETTTTEEEEEEECCCC-----
T ss_pred CEEEEEeCCCCEEEEEECCCCcccccC
Confidence 666665566788999998776655543
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.27 E-value=2.3e-05 Score=82.79 Aligned_cols=256 Identities=9% Similarity=0.026 Sum_probs=140.5
Q ss_pred EEEEccceeeeeEeeeeccc-cCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeeeeEecCCCCc-eeEEEEecCCC
Q psy6127 200 ITKCSENLVRSYRVAKVFRE-NTDKINSLDYSSDGSLLISCSD-DDQIIIYDCEQGTSKNTINSKKYG-VDLIKFTHSKT 276 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~-h~~~I~~l~~spd~~~lasgs~-dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~ 276 (515)
.+.+||.....|+.+..+.. +.....++++.+++++++.|+. ++.+.+||..+++-...-..+... -.+++..++++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 46667754455555444432 3334446778899999999984 468999998876543322222211 23445556776
Q ss_pred eEEEEEeeCC-----CeEEEEECCCCeeeEEe----cCCCCCeEEEEEcCCCCEEEEEeCC---------CcEEEEEcCC
Q psy6127 277 TAIHASTKVD-----ATLRYLSLHDNKYVRYF----PGHVRKVSSLNLSPVDDSFISGSYD---------KTVRVWDLRQ 338 (515)
Q Consensus 277 ~l~~~s~~~d-----~~v~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~l~s~s~d---------g~i~iwd~~~ 338 (515)
.++ .+|..+ ..+.+||..+++-...- ......-....+..++..++.|+.+ ..+..||..+
T Consensus 300 iyv-~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~ 378 (656)
T 1k3i_A 300 VFT-IGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378 (656)
T ss_dssp EEE-ECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred EEE-EeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCC
Confidence 444 333223 57999999887644320 0000000001122345555555544 3567899888
Q ss_pred CCeEEEEecCC----------CeeEEEEC-CCCCEEEEEECCC-----------cEEEEEeecCCCCCceeee-cCCCCC
Q psy6127 339 PNNVGMIQLSG----------NKPIAAYD-PEGLAFAIGVNSD-----------SIKLYDVRSYDKGPFASFK-CPGERG 395 (515)
Q Consensus 339 ~~~~~~~~~~~----------~~~~~~~s-~~~~~l~~g~~dg-----------~i~i~d~~~~~~~~~~~~~-~~~~~~ 395 (515)
........... ...++.+. .+++.+++|+.++ .+.+||..+... .... ......
T Consensus 379 ~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W---~~~~~~~mp~~ 455 (656)
T 1k3i_A 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPN---TVFASNGLYFA 455 (656)
T ss_dssp TCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCE---EEECTTCCSSC
T ss_pred cceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCe---eEEccCCCCCC
Confidence 76554332111 12334443 4777888887532 566777655331 1111 011111
Q ss_pred cCeEEEEEcCCCCEEEEEECC-----------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC
Q psy6127 396 CEWTGLKFSPDGKLILVSTNG-----------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
....+.+..|+++.+++|+.+ ..+.+||..+.+... +..............+.|+|++++.|+.
T Consensus 456 R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 456 RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee-cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 122356677899999998754 468999988765432 2211112222345567799999999985
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.0021 Score=68.75 Aligned_cols=234 Identities=13% Similarity=0.030 Sum_probs=144.5
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC----eeeEEecCCCCCe
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN----KYVRYFPGHVRKV 310 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~----~~~~~~~~h~~~v 310 (515)
+|+.+ ....|+..++........+. ....+..++|.+....++++. ...+.|+.+++... .....+.......
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD-~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEE-TTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ccccc-cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEee-ccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 44444 34568888887655444333 346678999999888887776 35788999998753 2233333344567
Q ss_pred EEEEEcCCCCEEEEE-eCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEEC-C-CcEEEEEeecCCCCCce
Q psy6127 311 SSLNLSPVDDSFISG-SYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVN-S-DSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~-d-g~i~i~d~~~~~~~~~~ 386 (515)
..|++.+.++.|+.+ ...+.|.+.++........+. .-.....++++|.+..|+.... . +.|...++....
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~----- 548 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----- 548 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-----
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-----
Confidence 789999877655544 557889999998665444443 2234788999998666666553 2 677777776432
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE-eCCCcE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG-STDGQV 464 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg-s~dg~I 464 (515)
.............+|++++.+..|+.+. ..+.|...++........+.... .......+++. +..|+.. ...+.|
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~-~l~~P~glav~--~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVF--EDKVFWTDIINEAI 625 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT-TTSSEEEEEEE--TTEEEEEETTTTEE
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCC-ccCCCCEEEEe--CCEEEEEECCCCEE
Confidence 1111122234567999998877777765 45679999985444333332211 11124566664 3345444 456788
Q ss_pred EEEECCCCeEEEEEc
Q psy6127 465 HIWNAERGYKVCVLD 479 (515)
Q Consensus 465 ~iwd~~~~~~~~~~~ 479 (515)
...|..+|+.+..+.
T Consensus 626 ~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 626 FSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEETTTCCCCEEEE
T ss_pred EEEeCCCCcceEEee
Confidence 888877776555553
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.0021 Score=62.02 Aligned_cols=230 Identities=13% Similarity=0.118 Sum_probs=124.9
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEec---CCCCceeEEEEecC---CCeEEEEEeeCC----Ce
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTIN---SKKYGVDLIKFTHS---KTTAIHASTKVD----AT 288 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~~---~~~~~v~~~~~~~~---~~~l~~~s~~~d----~~ 288 (515)
-.....++|.|||++++ +..+|.|++++ +++.. ..+. ........++|+|+ +..++++..... +.
T Consensus 30 l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34567999999998555 45679999998 44422 2221 22456889999998 666666653211 67
Q ss_pred EEEEECCCCe-----ee-EEec---CCCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEEcCC--------
Q psy6127 289 LRYLSLHDNK-----YV-RYFP---GHVRKVSSLNLSPVDDSFISGSY-------------DKTVRVWDLRQ-------- 338 (515)
Q Consensus 289 v~vwd~~~~~-----~~-~~~~---~h~~~v~~l~~~~~~~~l~s~s~-------------dg~i~iwd~~~-------- 338 (515)
|..++...+. .+ ..+. +.......++|.|||.+.++.+. .|.|.-+|...
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 8888876431 11 2233 11123468999999986665432 14566666543
Q ss_pred ------CCeEEEEecCCCeeEEEECC-CCCEEEEEECCCcE------EEEEeecCCCC-------------CceeeecCC
Q psy6127 339 ------PNNVGMIQLSGNKPIAAYDP-EGLAFAIGVNSDSI------KLYDVRSYDKG-------------PFASFKCPG 392 (515)
Q Consensus 339 ------~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i------~i~d~~~~~~~-------------~~~~~~~~~ 392 (515)
...+.... ......++|+| ++.++++-...+.+ .+.-+..+... ........
T Consensus 187 ~~~~~~~~~i~a~G-~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~- 264 (352)
T 2ism_A 187 LGRRGARPEVYSLG-HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW- 264 (352)
T ss_dssp TTCTTSCTTEEEEC-CSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-
T ss_pred cCCCCCCccEEEEc-CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-
Confidence 01111111 12356789999 66666554333331 23333322100 00011111
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCce------eEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNC------VQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~------~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
.+......++| .+|..+++....+.|...++..... ...+. .....+..+++.|||.++++..
T Consensus 265 ~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~---~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL---SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE---ESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec---ccCCCeeEEEECCCCcEEEEEe
Confidence 11224557787 4666655555667777777654321 11221 1224588999999998766654
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=98.19 E-value=0.00081 Score=63.10 Aligned_cols=209 Identities=10% Similarity=0.144 Sum_probs=130.2
Q ss_pred ecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE-ecC----CC--CCeEEEEE---cCCCCEEEEEe--
Q psy6127 259 INSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY-FPG----HV--RKVSSLNL---SPVDDSFISGS-- 326 (515)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~-~~~----h~--~~v~~l~~---~~~~~~l~s~s-- 326 (515)
++....-..+++|.+....+++.+ -..++|..||...+..... +.+ .. ..+..+.| .|+++++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~-l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSN-LYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEE-TTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred ecCcccCCcCccCcCCCCEEEEEe-ccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 344444566788998877777665 3689999999986644333 322 11 14689999 68877777544
Q ss_pred -----------CCCcEEEEEcC---CCCeEEEEecC--------------CCeeEEEECCCCCEEEEEECC-CcEEEEEe
Q psy6127 327 -----------YDKTVRVWDLR---QPNNVGMIQLS--------------GNKPIAAYDPEGLAFAIGVNS-DSIKLYDV 377 (515)
Q Consensus 327 -----------~dg~i~iwd~~---~~~~~~~~~~~--------------~~~~~~~~s~~~~~l~~g~~d-g~i~i~d~ 377 (515)
.+..|..+|+. +++.+...... .....++.+++|+..++++.. +.|..++.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 26789999999 78777665432 136789999999999998887 77666655
Q ss_pred ecCCCCCceeeec-C--CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcee-EEee--ccccCCCCCEEE-EEec
Q psy6127 378 RSYDKGPFASFKC-P--GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV-QSLS--GVLNNNASPLEA-TFTP 450 (515)
Q Consensus 378 ~~~~~~~~~~~~~-~--~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~-~~~~--~~~~~~~~i~~~-~~sp 450 (515)
.... ...... . .......+.|+++|+|+.|++....|.+..+|+.+.... .... +..........+ ..-.
T Consensus 167 dG~~---~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 167 DGKT---VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp TSCC---EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE
T ss_pred CCCE---EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCccccccccc
Confidence 4321 111111 1 122234669999999999988877999999998843220 1111 111111112333 3334
Q ss_pred CCCE-EEEEeCCCcEEEEECCC
Q psy6127 451 DSQF-VASGSTDGQVHIWNAER 471 (515)
Q Consensus 451 ~g~~-l~sgs~dg~I~iwd~~~ 471 (515)
+|+. +++.+..+.+.+.+.+.
T Consensus 244 ~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp TTEEEEEEEETTEEEEEECSST
T ss_pred CCEEEEEEcCCCCEEEEECCCC
Confidence 7777 44444566666665544
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=98.18 E-value=9.2e-06 Score=86.16 Aligned_cols=240 Identities=12% Similarity=0.048 Sum_probs=140.7
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC----CeeeEEecCCCCCeEEEEEcC
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD----NKYVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~----~~~~~~~~~h~~~v~~l~~~~ 317 (515)
.+.|+..++.+.+....+.. ...+..++|.+.+..++++. ...+.|+.+++.. ......+.........+++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD-~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECC-TTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEe-cCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 35788888876655443333 34567899999888877764 3467899999875 222222222223355688876
Q ss_pred CCCE-EEEEeCCCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEEC--CCcEEEEEeecCCCCCceeeecCCC
Q psy6127 318 VDDS-FISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVN--SDSIKLYDVRSYDKGPFASFKCPGE 393 (515)
Q Consensus 318 ~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~--dg~i~i~d~~~~~~~~~~~~~~~~~ 393 (515)
.+.. +++-...+.|.++++........+.. ......++++|.+..|+.... .+.|..+++...... .+. ..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~---~l~--~~ 537 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLV--TE 537 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC---EES--CS
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee---EEE--eC
Confidence 5544 44445568899999876554443332 234677899997665554432 267777776542211 111 11
Q ss_pred CCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 394 RGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
.......|+|+|++..|+.+. ..+.|..+++.... .+.+............+++..+ .++++....+.|..++..+|
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC
Confidence 122345899999876666555 56789999986433 3333221111122456666544 44455556789999999889
Q ss_pred eEEEEEcCCCCCCeEEEEE
Q psy6127 473 YKVCVLDGDHPSAVQSLQF 491 (515)
Q Consensus 473 ~~~~~~~~~h~~~V~~l~~ 491 (515)
+.+..+.. .....++|++
T Consensus 616 ~~~~~i~~-~~~~P~~i~v 633 (699)
T 1n7d_A 616 SDVNLLAE-NLLSPEDMVL 633 (699)
T ss_dssp EEEECCCT-TCSSCCCCCB
T ss_pred CceEEeec-CCCCCcEEEE
Confidence 88877754 2223444543
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=0.0081 Score=62.60 Aligned_cols=231 Identities=9% Similarity=0.039 Sum_probs=147.2
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEE
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSL 313 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l 313 (515)
+|+.+ ..+.|+..++++......+.. .-..+..++|.+.+..++.+. ..++.|..+++........+.........+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD-~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTD-ISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEE-CCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 55554 457899999986554333332 234688999999988888776 358899999987654443343333457789
Q ss_pred EEcCCCCEEEEE-eCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEEC--CCcEEEEEeecCCCCCceeee
Q psy6127 314 NLSPVDDSFISG-SYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVN--SDSIKLYDVRSYDKGPFASFK 389 (515)
Q Consensus 314 ~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~--dg~i~i~d~~~~~~~~~~~~~ 389 (515)
++.+.+..|+.+ ...+.|.+.++......... ..-.....++++|....|..... .+.|...++..... ..+.
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~---~~l~ 162 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER---TTLV 162 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EEEE
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce---EEEE
Confidence 998776655544 45678999998765443333 22344788999996666666553 45676666654321 1111
Q ss_pred cCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 390 CPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 390 ~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
........++++++++.|+.+. ..+.|..+|+..... ..+..... ....+++.. +.++++-...+.|...|
T Consensus 163 ---~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~---~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 163 ---PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLP---HPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp ---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCS---CEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred ---CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCC---CceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 1234567999999887777765 467899999865443 33333222 267788865 44444444578899999
Q ss_pred CCCCeEEEEE
Q psy6127 469 AERGYKVCVL 478 (515)
Q Consensus 469 ~~~~~~~~~~ 478 (515)
..+|+....+
T Consensus 235 k~tg~~~~~l 244 (628)
T 4a0p_A 235 KTSGQNRTII 244 (628)
T ss_dssp TTTCCSCEEE
T ss_pred CCCCCceEEE
Confidence 7777544333
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.13 E-value=0.0019 Score=61.25 Aligned_cols=206 Identities=10% Similarity=0.031 Sum_probs=132.0
Q ss_pred cEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCeee-eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 223 KINSLDYSSDGSL-LISCSDDDQIIIYDCEQGTSK-NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 223 ~I~~l~~spd~~~-lasgs~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
.+.+++|++.+.. ..+-...+.|..++...+... ..+...-.....+++.+.+..++.+- ...+.|.+++++.....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d-~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTD-SETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEE-CCCCEEEEEECCCCcEE
Confidence 4678999985444 445556788999998765322 22222334567899998777777765 35789999998754433
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEE-CCCcEEEEE
Q psy6127 301 RYFPGHVRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGV-NSDSIKLYD 376 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d 376 (515)
............+++.|.+..|+.+.. .+.|...++........... -.....++++|++..|..+. ..+.|..+|
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 333344566789999997776666653 57888888765433333222 23367899999777666654 567888898
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
+..... ..+. ........++++..+ ..+.+-...+.|..++..+|+....+..
T Consensus 195 ~dG~~~---~~~~--~~~~~~P~glav~~~-~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 195 LDGTNR---QAVV--KGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTSCSC---EEEE--CSCCSCEEEEEEETT-EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCCce---EEEe--cCCCCCceEEEEeCC-EEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 864321 1111 112334457777533 3444445678899999888877666654
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=0.0019 Score=67.22 Aligned_cols=227 Identities=11% Similarity=0.050 Sum_probs=133.5
Q ss_pred CCeEEEEECCCCe-eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee-eEEecCCCCCeEEEEEcCCC
Q psy6127 242 DDQIIIYDCEQGT-SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY-VRYFPGHVRKVSSLNLSPVD 319 (515)
Q Consensus 242 dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~ 319 (515)
...|+..++.... ........-.....++|.+.+..++.+- ...+.|..++++.... ...+...-.....+++.+.+
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD-~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSD-VSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEE-TTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEE-CCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 4678888887543 2222233345678999999888888775 3578899999876532 23333333578899999976
Q ss_pred CEEEEE-eCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEEC--CCcEEEEEeecCCCCCceeeecCCCCC
Q psy6127 320 DSFISG-SYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVN--SDSIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 320 ~~l~s~-s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
+.|+.+ ...+.|.+.++......... ..-.....++++|.+..|..... .+.|...++..... ..+. ....
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~---~~l~--~~~~ 170 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR---FIII--NSEI 170 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EEEE--CSSC
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce---EEEE--eCCC
Confidence 655554 45788999998765544333 22334778999998666666553 35566555543221 1111 1123
Q ss_pred cCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 396 CEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
....++++++++..|+.+. ..+.|..+|+..........+...+ +..+++..+ .+.++-...+.|...|..+|+.
T Consensus 171 ~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~---P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPH---PFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCC---ceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 4567999999877777665 4568888888654333222212222 456777655 3444444667899999877764
Q ss_pred EEEE
Q psy6127 475 VCVL 478 (515)
Q Consensus 475 ~~~~ 478 (515)
...+
T Consensus 247 ~~~i 250 (619)
T 3s94_A 247 LREI 250 (619)
T ss_dssp CEEC
T ss_pred cEEE
Confidence 4433
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.008 Score=57.19 Aligned_cols=246 Identities=14% Similarity=0.156 Sum_probs=129.8
Q ss_pred eeeEeeee-ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec---CCCCceeEEEEecCCCeEEEEEee
Q psy6127 209 RSYRVAKV-FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN---SKKYGVDLIKFTHSKTTAIHASTK 284 (515)
Q Consensus 209 ~~~~~~~~-~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~~ 284 (515)
++|+.+.. .......+.++.|+| +..++ ++.++.|.. ..+.|+.-.... .+...+..+.+.+++. +++++
T Consensus 66 ~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~-- 139 (327)
T 2xbg_A 66 QTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-AEMIT-- 139 (327)
T ss_dssp SSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-EEEEE--
T ss_pred CCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCC-EEEEe--
Confidence 34555432 122355789999986 44444 455665443 223333322222 2234567777776654 33333
Q ss_pred CCCeEEEEECCCCee-eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCC
Q psy6127 285 VDATLRYLSLHDNKY-VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGL 361 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~ 361 (515)
.++.|.. ..+.++. .....++...+..+++.|++..++.+...+..+-+|- .++.-..+ ........+.+++++.
T Consensus 140 ~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~ 217 (327)
T 2xbg_A 140 NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGR 217 (327)
T ss_dssp TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSC
T ss_pred CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCC
Confidence 3554432 1222322 2222345667899999998887766644333333442 12222222 2334577888899887
Q ss_pred EEEEEECCCcEEEEEeecCCCCCceeeecC-CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC
Q psy6127 362 AFAIGVNSDSIKLYDVRSYDKGPFASFKCP-GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 362 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
.++. +.+|.++..+...+. ........ ......+..+.+.|++..++++ .++.+ .+....|+.-..+.......
T Consensus 218 ~~~~-~~~G~~~~s~~D~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~ 292 (327)
T 2xbg_A 218 LWMI-VNGGKIAFSDPDNSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVP 292 (327)
T ss_dssp EEEE-ETTTEEEEEETTEEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSS
T ss_pred EEEE-eCCceEEEecCCCCC--eeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCC
Confidence 6654 467877766321111 00011111 1122357889999887766655 46666 44555565444443221122
Q ss_pred CCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 441 ASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
..+..+.|.+++. +++++.+|.|.-++
T Consensus 293 ~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 293 SNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 3478888886555 55566788777665
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=0.01 Score=57.22 Aligned_cols=234 Identities=11% Similarity=0.072 Sum_probs=128.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-eeeEec---CCCCceeEEEEecC---CCeEEEEEee--CC----C
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT-SKNTIN---SKKYGVDLIKFTHS---KTTAIHASTK--VD----A 287 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~s~~--~d----~ 287 (515)
-.....++|.|||++++ +..+|.|++++ .+++ .+..+. ........++++|+ +..++++... .+ +
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34578999999998554 56679999997 3454 222221 22356889999998 6666665431 13 5
Q ss_pred eEEEEECCCC-------eee-EEec-CCCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEEcCCC------
Q psy6127 288 TLRYLSLHDN-------KYV-RYFP-GHVRKVSSLNLSPVDDSFISGSY-------------DKTVRVWDLRQP------ 339 (515)
Q Consensus 288 ~v~vwd~~~~-------~~~-~~~~-~h~~~v~~l~~~~~~~~l~s~s~-------------dg~i~iwd~~~~------ 339 (515)
.|..|+...+ +.+ ..+. +.......++|.|||.+.++.+. .|.|.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 7778876654 111 1122 11123467999999986666432 245555555432
Q ss_pred ---CeEEEEecCCCeeEEEECC-CCCEEEEEECCCc-EEEEEeecCCC-------------CCceeeecCCCCCcCeEEE
Q psy6127 340 ---NNVGMIQLSGNKPIAAYDP-EGLAFAIGVNSDS-IKLYDVRSYDK-------------GPFASFKCPGERGCEWTGL 401 (515)
Q Consensus 340 ---~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~-i~i~d~~~~~~-------------~~~~~~~~~~~~~~~i~~l 401 (515)
..+....+ .....++|+| +++++++-...+. =.+.-+..+.. ..................+
T Consensus 186 f~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 186 FPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp STTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 11222222 2366799999 6665555332221 11221222110 0000111111123356788
Q ss_pred EEc-------CCCCEEEEEECCCcEEEEECCCC-cee--EEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 402 KFS-------PDGKLILVSTNGSIIRLFDAFNG-NCV--QSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 402 ~~s-------p~~~~l~~~s~dg~i~iwd~~~~-~~~--~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
+|. .+|.++++....+.|...++... +.. ..+. ......+..+++.|||.+.++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~--~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFF--KNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEEC--TTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeec--cCCCCCeeEEEECCCCcEEEEEe
Confidence 884 46766666666778888888753 222 1221 11234588999999997666653
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=98.03 E-value=0.012 Score=56.97 Aligned_cols=253 Identities=11% Similarity=0.096 Sum_probs=155.7
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
+..|.|-|+.++..+...... ..+.-.+|..+.+++-+ ..++.++|+++...+..+.-.. .|.-=.|-.+. .
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~~iiALra---g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~ 118 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA---GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-T 118 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECC---CSEEEECSSSSCEEEEE---TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-E
T ss_pred CCeEEEEECCCCCcceecccc---cceeeeCCCCcEEEEec---CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-e
Confidence 347888898876554322211 22344678777666654 7899999999999888876444 56556665433 3
Q ss_pred EEEEeCCCcEEEEEcCC-CCeEEEEecC-----CCeeEEEECCCCCEEEEEE-------CCCcEEEEEeecCCCCCceee
Q psy6127 322 FISGSYDKTVRVWDLRQ-PNNVGMIQLS-----GNKPIAAYDPEGLAFAIGV-------NSDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~-~~~~~~~~~~-----~~~~~~~~s~~~~~l~~g~-------~dg~i~i~d~~~~~~~~~~~~ 388 (515)
|+-.+ +..|.-|++.. ..+.+.+..+ ..+-....+++.++++..+ -.|.+.+|..+... .
T Consensus 119 l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~------s 191 (494)
T 1bpo_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV------S 191 (494)
T ss_dssp EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC------E
T ss_pred EEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc------c
Confidence 44433 57899999974 3556666433 2345567788999877543 23677888877633 2
Q ss_pred ecCCCCCcCeEEEEEcCCC---CEEEEEEC---CCcEEEEECCCC---c------eeEEeeccccCCCCCEEEEEecCCC
Q psy6127 389 KCPGERGCEWTGLKFSPDG---KLILVSTN---GSIIRLFDAFNG---N------CVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 389 ~~~~~~~~~i~~l~~sp~~---~~l~~~s~---dg~i~iwd~~~~---~------~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
....+|......+.+..+. ..+..+.. .+.+++.++... . ....+...........++..++...
T Consensus 192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg 271 (494)
T 1bpo_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (494)
T ss_dssp EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence 2223454433333332111 23334443 378899988532 1 1111111222344567899999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEcC
Q psy6127 454 FVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIP 510 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~~ 510 (515)
.++.-+.-|.+++||++++.++..-+- ...+|..-+-+....=++.-...+.|..+
T Consensus 272 viyviTK~G~i~lyDleTgt~i~~nrI-s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v 327 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKGQVLSV 327 (494)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEEETTTTEEEEEETTCEEEEE
T ss_pred EEEEEecCceEEEEecccceeeeeecc-cCCceEEecccCCCCcEEEEccCceEEEE
Confidence 999999999999999999999987775 55667665555543334433444444443
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0044 Score=59.75 Aligned_cols=235 Identities=10% Similarity=0.035 Sum_probs=124.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE---e----cCCCCceeEEEEecC---CCeEEEEEeeC------
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT---I----NSKKYGVDLIKFTHS---KTTAIHASTKV------ 285 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~l~~~s~~~------ 285 (515)
.....|+|.|+|+.|+.+...|.|++++.. ++.... + .........++++|+ +..++++....
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999999834455678999999853 432211 1 122346789999996 56666654221
Q ss_pred CCeEEEEECCCC-----ee--e-EEecC---CCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEEcCCCC-
Q psy6127 286 DATLRYLSLHDN-----KY--V-RYFPG---HVRKVSSLNLSPVDDSFISGSY-------------DKTVRVWDLRQPN- 340 (515)
Q Consensus 286 d~~v~vwd~~~~-----~~--~-~~~~~---h~~~v~~l~~~~~~~~l~s~s~-------------dg~i~iwd~~~~~- 340 (515)
...|..++...+ .. + ..+.. .......++|.|||.+.++.+. .|.|.-+|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666666432 11 1 11111 1112457999999975555433 2456666765320
Q ss_pred -----------eEEEEe-cCCCeeEEEECC-CCCEEEEEEC-CCcEEEEEeecCCCC-----------------------
Q psy6127 341 -----------NVGMIQ-LSGNKPIAAYDP-EGLAFAIGVN-SDSIKLYDVRSYDKG----------------------- 383 (515)
Q Consensus 341 -----------~~~~~~-~~~~~~~~~~s~-~~~~l~~g~~-dg~i~i~d~~~~~~~----------------------- 383 (515)
....+. .......++|+| +|+++++-.. ++.=.|.-+..+..-
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 111121 122367799999 5555444221 111122222211100
Q ss_pred ---CceeeecCCCCCcCeEEEEEcC-------CCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 384 ---PFASFKCPGERGCEWTGLKFSP-------DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 384 ---~~~~~~~~~~~~~~i~~l~~sp-------~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
........ .+......+.|.. +|+++++....+.|...++..++..............+..+++.|||.
T Consensus 257 ~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 257 VAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 00000000 1123466788864 466666666778888888776644332221112233588999999998
Q ss_pred EEEEE
Q psy6127 454 FVASG 458 (515)
Q Consensus 454 ~l~sg 458 (515)
++++.
T Consensus 336 lyv~t 340 (353)
T 2g8s_A 336 LYVLT 340 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66643
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0082 Score=64.14 Aligned_cols=209 Identities=12% Similarity=0.042 Sum_probs=132.3
Q ss_pred cCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCC----eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 220 NTDKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQG----TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 220 h~~~I~~l~~spd~~~l-asgs~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
....+..++|++.+..| ++-...+.|+.+++... .....+.........+++.+.+..++++- ...+.|.+.++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD-~~~~~I~v~~l 500 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVLGTVSVADT 500 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEEEEET
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe-cCCCeEEEEeC
Confidence 34567899999855544 45455688999988742 22333443446678899999888888776 46889999998
Q ss_pred CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEE-CCC
Q psy6127 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGV-NSD 370 (515)
Q Consensus 295 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~-~dg 370 (515)
........+...-.....|++.|.+..|+.+.. .+.|...++............ .....+++++.+..|+.+. ..+
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCC
Confidence 765444434344456899999998776666653 267888888765544444322 3477899998777776664 456
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEee
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~ 434 (515)
.|..+++..... ..+...........+|++. +.+|+.+. ..+.|...+..+|+.+..+.
T Consensus 581 ~I~~~d~dG~~~---~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 581 SISSIDVNGGNR---KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEEEETTSCSC---EEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred cEEEEecCCCce---EEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 788888765321 1121111112233466664 33555554 56788888877776555543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.95 E-value=0.0022 Score=61.89 Aligned_cols=226 Identities=12% Similarity=0.058 Sum_probs=120.4
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee--eEEec---CCCCCeEEEEEcCC---CCEEEEEeC-C-----C
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY--VRYFP---GHVRKVSSLNLSPV---DDSFISGSY-D-----K 329 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~--~~~~~---~h~~~v~~l~~~~~---~~~l~s~s~-d-----g 329 (515)
.....++|.|++. ++++. .++.|.+++ +++. +..+. ........++++|+ +..|+.+.. . +
T Consensus 31 ~~P~~ia~~pdG~-l~V~e--~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIAE--RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSC-EEEEE--TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCe-EEEEe--CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 4567999999997 44443 579999998 4432 22221 22456899999998 555554443 2 6
Q ss_pred cEEEEEcCCCCe-----E-EEEec----CCCeeEEEECCCCCEEEEEECC-------------CcEEEEEeecCC--CCC
Q psy6127 330 TVRVWDLRQPNN-----V-GMIQL----SGNKPIAAYDPEGLAFAIGVNS-------------DSIKLYDVRSYD--KGP 384 (515)
Q Consensus 330 ~i~iwd~~~~~~-----~-~~~~~----~~~~~~~~~s~~~~~l~~g~~d-------------g~i~i~d~~~~~--~~~ 384 (515)
.|..++...+.. + ..+.. .+....++|.|+|.+.++.+.. |.|.-++....- ..+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 788888775421 1 11221 1234679999999776664321 344444433200 000
Q ss_pred -------ceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcE------EEEECCCCc------------------eeEE
Q psy6127 385 -------FASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSII------RLFDAFNGN------------------CVQS 432 (515)
Q Consensus 385 -------~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i------~iwd~~~~~------------------~~~~ 432 (515)
..... ...+. ....++|+| ++..+++-...+.+ .+.-+..+. +...
T Consensus 186 f~~~~~~~~~i~-a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 186 FLGRRGARPEVY-SLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TTTCTTSCTTEE-EECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred ccCCCCCCccEE-EEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 00000 01111 234799999 56655443332221 122222222 1111
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe----E--EEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY----K--VCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~----~--~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
+ .....+..++| .+|.++++....+.|...+++... . ...+.. ....+.++++.|||.+.++..
T Consensus 264 ~----~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 264 W----PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp C----TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-SSCCEEEEEECTTSCEEEEEC
T ss_pred c----CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc-cCCCeeEEEECCCCcEEEEEe
Confidence 1 11123567777 467666665566778777765332 1 122222 236789999999998877765
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.95 E-value=0.005 Score=58.29 Aligned_cols=186 Identities=16% Similarity=0.217 Sum_probs=119.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECC----CCCE--EEEEE--C--CCcEEEEEeecCCCCCceee
Q psy6127 319 DDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP----EGLA--FAIGV--N--SDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 319 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~----~~~~--l~~g~--~--dg~i~i~d~~~~~~~~~~~~ 388 (515)
...++.....+-+.+||+ +|+.++.+.. +..+.+.+-| .|+. ++..+ . +++|.+|++..... .....
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeec
Confidence 456777777889999999 8888888765 3466665555 2322 33333 3 57899998853221 12222
Q ss_pred ecC--C--CCCcCeEEEEE--cCC-CC-EEEEEECCCcEEEEECC---C----CceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 389 KCP--G--ERGCEWTGLKF--SPD-GK-LILVSTNGSIIRLFDAF---N----GNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 389 ~~~--~--~~~~~i~~l~~--sp~-~~-~l~~~s~dg~i~iwd~~---~----~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
... . .....+..+|+ +|. ++ ++++...+|.+..|++. . ++.++++... ..+..|...+...
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg----sq~EgcvvDd~~g 192 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN----SQTEGMAADDEYG 192 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS----SCEEEEEEETTTT
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC----CCcceEEEcCCCC
Confidence 110 0 11144557888 774 44 67888889999999883 3 3455665542 3478999999999
Q ss_pred EEEEEeCCCcEEEEECC-----CCeEEEEEcCCC-CCCeEEEEE--CCCCC-EEEEee-C--CEEEEcCC
Q psy6127 454 FVASGSTDGQVHIWNAE-----RGYKVCVLDGDH-PSAVQSLQF--NPKYH-MLASAC-S--NMAFWIPT 511 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~-----~~~~~~~~~~~h-~~~V~~l~~--sp~~~-~las~~-~--dv~iW~~~ 511 (515)
.|+.+-++.-|..++.+ +++.+..+...+ ...+..|+. .++++ +|++++ + ...+|+..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 99999998777777754 456776664323 246888888 45555 555554 3 38888875
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=0.032 Score=58.09 Aligned_cols=284 Identities=10% Similarity=0.063 Sum_probs=161.3
Q ss_pred cCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSD--DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
.-.....+++.|...+|+.... .+.|...++.. .....+-..-.....+++.+++..++.+- ...+.|...|+...
T Consensus 121 ~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~P~GlalD~~~~~LY~aD-~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 121 DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG-SERTTLVPNVGRANGLTIDYAKRRLYWTD-LDTNLIESSNMLGL 198 (628)
T ss_dssp SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSCSSEEEEEEETTTTEEEEEE-TTTTEEEEEETTSC
T ss_pred CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC-CceEEEECCCCCcceEEEccccCEEEEEE-CCCCEEEEEcCCCC
Confidence 3455789999996556655542 46788888764 33333333456688999999999988887 36789999998754
Q ss_pred eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC--C-----------------------Cee
Q psy6127 298 KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS--G-----------------------NKP 352 (515)
Q Consensus 298 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~-----------------------~~~ 352 (515)
.. ..+.........+++.. +..+++-...+.|...|..+++....+... . ...
T Consensus 199 ~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~ 276 (628)
T 4a0p_A 199 NR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCS 276 (628)
T ss_dssp SC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCS
T ss_pred ce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcc
Confidence 33 33333334466788764 444444445788888887666544333110 0 000
Q ss_pred EEEE----------CC-------CC-------CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC
Q psy6127 353 IAAY----------DP-------EG-------LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK 408 (515)
Q Consensus 353 ~~~~----------s~-------~~-------~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~ 408 (515)
.+|+ .| ++ .+++.+ ....|+-..+..... .....+......+.+++|++.+.
T Consensus 277 ~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s-~~~~i~~i~l~~~~~---~~~~l~~~~~~~~~~ld~d~~~~ 352 (628)
T 4a0p_A 277 HLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFS-QKSAINRMVIDEQQS---PDIILPIHSLRNVRAIDYDPLDK 352 (628)
T ss_dssp SEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEE-ETTEEEEECCCTTCC---CCEECCCTTCSCEEEEEEETTTT
T ss_pred hhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeee-ccceEEEEecccccC---ceEEEEehhcCCceEEEEecCCC
Confidence 0111 11 11 111111 122333333322110 01111122234567899999777
Q ss_pred EEEEEE-CCCcEEEEECCCCceeEEeeccc---cCCCCCEEEEEecCCCEEE-EEeCCCcEEEEECCCCeEEEEEcCCCC
Q psy6127 409 LILVST-NGSIIRLFDAFNGNCVQSLSGVL---NNNASPLEATFTPDSQFVA-SGSTDGQVHIWNAERGYKVCVLDGDHP 483 (515)
Q Consensus 409 ~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~---~~~~~i~~~~~sp~g~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~h~ 483 (515)
.|+.+. ..+.|+.++.........+.... .....+..+++...++.|+ +-+..+.|.+.+++ |+....+.....
T Consensus 353 ~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l 431 (628)
T 4a0p_A 353 QLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQ 431 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTT
T ss_pred eEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCC
Confidence 777665 46778888875433222232100 1123478999999877555 55567889999985 555444432245
Q ss_pred CCeEEEEECC-CCCEEEEeeCC-E-EEEcCCC
Q psy6127 484 SAVQSLQFNP-KYHMLASACSN-M-AFWIPTL 512 (515)
Q Consensus 484 ~~V~~l~~sp-~~~~las~~~d-v-~iW~~~~ 512 (515)
....++++.| .|.+..+-.+. - +||....
T Consensus 432 ~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~ 463 (628)
T 4a0p_A 432 DRPRAVVVNPEKGYMYFTNLQERSPKIERAAL 463 (628)
T ss_dssp CCEEEEEEETTTTEEEEEEEETTEEEEEEEET
T ss_pred CceeeEEEecCCCeEEEeecCCCCCeEEEEeC
Confidence 6789999999 66666554333 2 6776544
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.90 E-value=0.02 Score=55.35 Aligned_cols=232 Identities=13% Similarity=0.181 Sum_probs=144.9
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC-CeeeEEecCC
Q psy6127 228 DYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD-NKYVRYFPGH 306 (515)
Q Consensus 228 ~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-~~~~~~~~~h 306 (515)
-.+|..+.+|.-. ..++.|+|+++.+.++.+...+ .|.--.|-.+. .+.+++ +..|+-|++.. ..+++.+..|
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l~lVT---~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT---DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EEEEEC---SSEEEEEESSSSCCCEEEEECC
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eEEEEc---CCeeEEecccCCCCchhheecc
Confidence 3678777777665 6899999999998888877654 56666776554 556665 88999999974 3566666655
Q ss_pred C----CCeEEEEEcCCCCEEEEEe-------CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCC-----CEEEEEEC--
Q psy6127 307 V----RKVSSLNLSPVDDSFISGS-------YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG-----LAFAIGVN-- 368 (515)
Q Consensus 307 ~----~~v~~l~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~-----~~l~~g~~-- 368 (515)
. ..|..-..+++.++++..+ -.|.+.+|..+.+.....-.|. ..-..+-.+| ..++.+..
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGha--a~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA--ASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSE--EEEEEEECTTCSSEEEEEEEEECST
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeee--eeeEEEecCCCCCCceEEEEEEecC
Confidence 3 4677778888888766443 2467889988766433221111 1111222222 23444443
Q ss_pred -CCcEEEEEeecC--CCCCc--eeeec---CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC
Q psy6127 369 -SDSIKLYDVRSY--DKGPF--ASFKC---PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 369 -dg~i~i~d~~~~--~~~~~--~~~~~---~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
.+.+++.++... ...+. +.... +.....-..++..|+....++.-+.-|.+++||+.++.++..-+-..
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~--- 300 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG--- 300 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS---
T ss_pred CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC---
Confidence 378999998653 11111 11111 12223334489999988899999999999999999999987655322
Q ss_pred CCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 441 ASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
..|...+.+....=++.....|.|.--.++
T Consensus 301 ~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 301 ETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp SCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred CceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 225544444444444444566655544443
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0025 Score=59.83 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=108.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEEEEecCC---------CeeEEEE---CCCCCEEEEEEC---
Q psy6127 305 GHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVGMIQLSG---------NKPIAAY---DPEGLAFAIGVN--- 368 (515)
Q Consensus 305 ~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~~---s~~~~~l~~g~~--- 368 (515)
.......+++|.+....|+.++ ..++|..||...+..... .... .+..+.+ +|+++++++...
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 3344456789988666666666 789999999976654443 2222 2467899 688877776442
Q ss_pred ----------CCcEEEEEee---cCCCCCceeeec-CCC-------CCcCeEEEEEcCCCCEEEEEECC-CcEEEEECCC
Q psy6127 369 ----------SDSIKLYDVR---SYDKGPFASFKC-PGE-------RGCEWTGLKFSPDGKLILVSTNG-SIIRLFDAFN 426 (515)
Q Consensus 369 ----------dg~i~i~d~~---~~~~~~~~~~~~-~~~-------~~~~i~~l~~sp~~~~l~~~s~d-g~i~iwd~~~ 426 (515)
+..+..||+. +++......+.. ... .......++..++|+..++++.. +.|...+..
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd- 167 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD- 167 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-
Confidence 5779999998 544221111110 000 22347799999999988888877 887777754
Q ss_pred CceeEEeec-c--ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy6127 427 GNCVQSLSG-V--LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472 (515)
Q Consensus 427 ~~~~~~~~~-~--~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~ 472 (515)
|+....+.. . .......+.++++|+|..|++....|.+..+|+.+.
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 333333221 1 111223679999999998888877999999998754
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.027 Score=54.18 Aligned_cols=241 Identities=12% Similarity=0.049 Sum_probs=130.1
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe-eeEEec---CCCCCeEEEEEcCC---CCEEEEEeC----C---
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK-YVRYFP---GHVRKVSSLNLSPV---DDSFISGSY----D--- 328 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~-~~~~~~---~h~~~v~~l~~~~~---~~~l~s~s~----d--- 328 (515)
-.....++|.|++. ++++. .++.|+++| .+++ .+..+. ........++++|+ +..|+.+.. +
T Consensus 28 l~~P~~ia~~pdG~-l~V~e--~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTE--RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEE--TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCCe-EEEEe--CCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 34578999999986 44443 579999997 3454 222221 22356889999998 555554433 3
Q ss_pred -CcEEEEEcCCC--Ce-----E-EEEec--CCCeeEEEECCCCCEEEEEECC-------------CcEEEEEeecCC--C
Q psy6127 329 -KTVRVWDLRQP--NN-----V-GMIQL--SGNKPIAAYDPEGLAFAIGVNS-------------DSIKLYDVRSYD--K 382 (515)
Q Consensus 329 -g~i~iwd~~~~--~~-----~-~~~~~--~~~~~~~~~s~~~~~l~~g~~d-------------g~i~i~d~~~~~--~ 382 (515)
+.|..|+.... .. + ..+.. .+....++|.|+|.++++.+.. |.|.-++....- .
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777877654 11 1 11221 1235679999999877764321 344444432210 0
Q ss_pred CCc--eeeecCCCCCcCeEEEEEcC-CCCEEEEEECCC---cEEEEECCCCce---------------eEEeeccccCCC
Q psy6127 383 GPF--ASFKCPGERGCEWTGLKFSP-DGKLILVSTNGS---IIRLFDAFNGNC---------------VQSLSGVLNNNA 441 (515)
Q Consensus 383 ~~~--~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg---~i~iwd~~~~~~---------------~~~~~~~~~~~~ 441 (515)
.+. ..+. ...+. ....++|+| +++.+++-...+ .|.+.. .+.. ............
T Consensus 184 npf~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ 259 (354)
T 3a9g_A 184 NPFPNSPIW-SYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETW 259 (354)
T ss_dssp SSSTTCCEE-EECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred CCCCCCcEE-EEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCc
Confidence 000 0111 11222 234899999 565444432221 233322 2210 000000001123
Q ss_pred CCEEEEEe-------cCCCEEEEEeCCCcEEEEECCCC-eEE--EEEcCCCCCCeEEEEECCCCCEEEEee-CCE-----
Q psy6127 442 SPLEATFT-------PDSQFVASGSTDGQVHIWNAERG-YKV--CVLDGDHPSAVQSLQFNPKYHMLASAC-SNM----- 505 (515)
Q Consensus 442 ~i~~~~~s-------p~g~~l~sgs~dg~I~iwd~~~~-~~~--~~~~~~h~~~V~~l~~sp~~~~las~~-~dv----- 505 (515)
.+..++|. .+|.++++.-..+.|...++... +.. ..+.......+.++++.|||.+.++.. .+.
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~ 339 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTSNRDGRGSLR 339 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEECTTSSSSCCC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEeCCCCCcCCC
Confidence 36778883 56777776666778888888753 322 233221346799999999998777765 233
Q ss_pred ----EEEcCC
Q psy6127 506 ----AFWIPT 511 (515)
Q Consensus 506 ----~iW~~~ 511 (515)
+||.+.
T Consensus 340 ~~~g~i~ri~ 349 (354)
T 3a9g_A 340 AGDDKILKIV 349 (354)
T ss_dssp TTCSCEEEEE
T ss_pred CCCCEEEEEe
Confidence 788764
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.023 Score=54.39 Aligned_cols=196 Identities=12% Similarity=0.132 Sum_probs=112.4
Q ss_pred EEEEEEcCCCCEEEEE------------eCCCeEEEEECCCC--ee-eeEecC-----CCCceeEEEEec--CCC-eEEE
Q psy6127 224 INSLDYSSDGSLLISC------------SDDDQIIIYDCEQG--TS-KNTINS-----KKYGVDLIKFTH--SKT-TAIH 280 (515)
Q Consensus 224 I~~l~~spd~~~lasg------------s~dg~i~iwd~~~~--~~-~~~~~~-----~~~~v~~~~~~~--~~~-~l~~ 280 (515)
.-.+...|+|..++++ ..+|.|.++|.++. +. ...+.+ .......+.+.+ ++. ++++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3455566766444443 16899999998732 21 112222 234567777766 344 4555
Q ss_pred EEee-CCCeEEEEECCCC--e--eeEEecCC-CCCeEEEEEcCCCCEEEEEeC-----------------CCcEEEEEcC
Q psy6127 281 ASTK-VDATLRYLSLHDN--K--YVRYFPGH-VRKVSSLNLSPVDDSFISGSY-----------------DKTVRVWDLR 337 (515)
Q Consensus 281 ~s~~-~d~~v~vwd~~~~--~--~~~~~~~h-~~~v~~l~~~~~~~~l~s~s~-----------------dg~i~iwd~~ 337 (515)
+... .+.+|.+|+++.+ . .+..+.+. -...+++.+.++|.+.++... .|.|.-+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 5432 2567888876543 2 23344432 246889999999987776541 234444444
Q ss_pred CCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEEC
Q psy6127 338 QPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTN 415 (515)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~ 415 (515)
++.......-...+.++|+||++.+.++. ..+.|..|++..... ....... ......-.+++++ +|++.+++..
T Consensus 211 -~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~--l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 211 -NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT--LTPLRVL-SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp -TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC--EEEEEEE-ECSSEEEEEEECTTTCCEEEEEES
T ss_pred -CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc--EecCEEE-eCCCCCceEEEeCCCCcEEEEecC
Confidence 44333333334478899999998877765 568899999874211 1111111 1134567899999 5887776653
Q ss_pred C-CcEEEEEC
Q psy6127 416 G-SIIRLFDA 424 (515)
Q Consensus 416 d-g~i~iwd~ 424 (515)
+ +.|..|+.
T Consensus 287 ~g~~v~~~~P 296 (355)
T 3sre_A 287 NGMRIFFYDA 296 (355)
T ss_dssp CHHHHHSCCT
T ss_pred CceEEEEECC
Confidence 3 34444443
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.03 Score=53.77 Aligned_cols=242 Identities=10% Similarity=0.050 Sum_probs=129.2
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE---e----cCCCCCeEEEEEcCC---CCEEEEEe-C-----
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY---F----PGHVRKVSSLNLSPV---DDSFISGS-Y----- 327 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~---~----~~h~~~v~~l~~~~~---~~~l~s~s-~----- 327 (515)
.....++|.|++..++++. ..+.|++++.. ++.... + .........++++|+ +..|+.+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e--~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITL--RGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECSTTCCEEEEE--TTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCCCCEEEEEe--CCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3568999999998555544 57999999853 332111 1 122345789999996 55444443 2
Q ss_pred --CCcEEEEEcCCCC----eEEEE-e-c------CCCeeEEEECCCCCEEEEEECC-------------CcEEEEEeecC
Q psy6127 328 --DKTVRVWDLRQPN----NVGMI-Q-L------SGNKPIAAYDPEGLAFAIGVNS-------------DSIKLYDVRSY 380 (515)
Q Consensus 328 --dg~i~iwd~~~~~----~~~~~-~-~------~~~~~~~~~s~~~~~l~~g~~d-------------g~i~i~d~~~~ 380 (515)
...|..|+..... ....+ . . .+....++|.|+|.++++.+.. |.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 2356666665431 11111 1 1 1224569999999665554332 34555554321
Q ss_pred C--CCCc-------eeeecCCCCCcCeEEEEEcC-CCCEEEEEECC--CcEEEEECCCCcee----E-------------
Q psy6127 381 D--KGPF-------ASFKCPGERGCEWTGLKFSP-DGKLILVSTNG--SIIRLFDAFNGNCV----Q------------- 431 (515)
Q Consensus 381 ~--~~~~-------~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~d--g~i~iwd~~~~~~~----~------------- 431 (515)
- ..+. .... ...+ .....++|+| +|+ |.++... +.=.|.-+..+... .
T Consensus 175 ~p~~npf~~~~~~~~~i~-a~G~-rnp~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIW-SYGI-RNPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp CCTTCTTTTSTTSCTTEE-EECC-SEEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCcCCCCCCccEE-EEcC-cCccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 0 0000 0000 0122 2355899999 554 4444322 11122222222110 0
Q ss_pred ----Eeecc------ccCCCCCEEEEEec-------CCCEEEEEeCCCcEEEEECCCCeEEEE--EcCCCCCCeEEEEEC
Q psy6127 432 ----SLSGV------LNNNASPLEATFTP-------DSQFVASGSTDGQVHIWNAERGYKVCV--LDGDHPSAVQSLQFN 492 (515)
Q Consensus 432 ----~~~~~------~~~~~~i~~~~~sp-------~g~~l~sgs~dg~I~iwd~~~~~~~~~--~~~~h~~~V~~l~~s 492 (515)
..... ..+...+..++|.. +|.++++.-..+.|...+++.++.... +.......+.++++.
T Consensus 252 ~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp CCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred ccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence 00000 00112356777764 466777666778888888876654432 221134579999999
Q ss_pred CCCCEEEEee-CCEEEEcCC
Q psy6127 493 PKYHMLASAC-SNMAFWIPT 511 (515)
Q Consensus 493 p~~~~las~~-~dv~iW~~~ 511 (515)
|||.+.++.+ .+.+||.+.
T Consensus 332 pdG~lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 332 PDGYLYVLTDESSGELLKVS 351 (353)
T ss_dssp TTSCEEEEECSTTEEEEEEE
T ss_pred CCCcEEEEEeCCCCEEEEEe
Confidence 9999877655 568898764
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00052 Score=72.71 Aligned_cols=209 Identities=12% Similarity=0.050 Sum_probs=123.7
Q ss_pred CcEEEEEEcCCCCEEEEEe-CCCeEEEEECCC----CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC
Q psy6127 222 DKINSLDYSSDGSLLISCS-DDDQIIIYDCEQ----GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs-~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~ 296 (515)
..+..++|++.+..|+.+. ..+.|+.+++.. ......+.........+++.+.+..++++- ...+.|.++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD-~~~~~I~v~d~dg 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVLGTVSVADTKG 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECC-TTTSCEEEEBSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEe-ccCCeEEEEecCC
Confidence 4567889998766666554 457899999875 222222222223456688887666666654 3578899999876
Q ss_pred CeeeEEecCCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEE-ECCCcE
Q psy6127 297 NKYVRYFPGHVRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIG-VNSDSI 372 (515)
Q Consensus 297 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g-~~dg~i 372 (515)
......+.........+++.|.+..|+.+.. .+.|..+++........... -.....++++|++..|+.+ +..+.|
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 5444333333345678899997665555443 26788877754332222211 1235679999976555554 456789
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeec
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 435 (515)
..+++..... ..+...........++++..+ ..+++....+.|..++..+|+.+..+..
T Consensus 565 ~~~d~dG~~~---~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 565 SSIDVNGGNR---KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEECSSSSCC---EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred EEEccCCCce---EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 9998864321 111111111122235666544 3444445678899999888887776653
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.025 Score=54.14 Aligned_cols=186 Identities=11% Similarity=0.147 Sum_probs=108.4
Q ss_pred CeEEEEEcCCCCEEEEE------------eCCCcEEEEEcCCCC-eEEEEecC--------CCeeEEEECC--CCC--EE
Q psy6127 309 KVSSLNLSPVDDSFISG------------SYDKTVRVWDLRQPN-NVGMIQLS--------GNKPIAAYDP--EGL--AF 363 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~------------s~dg~i~iwd~~~~~-~~~~~~~~--------~~~~~~~~s~--~~~--~l 363 (515)
..-++...|+|..++++ ..+|.|.++|.++.. ....+... -....+.+.+ ++. ++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34556677766544444 268999999987431 12222221 1344566544 453 34
Q ss_pred EEEEC--CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-----------------CCcEEEEEC
Q psy6127 364 AIGVN--SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-----------------GSIIRLFDA 424 (515)
Q Consensus 364 ~~g~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-----------------dg~i~iwd~ 424 (515)
++-.. +.++.+|++.................-...+.+.+.++|.+.++... .|.+..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 44333 56889999876432221111223344456789999999987766541 234555544
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCC-CeE--EEEEcCCCCCCeEEEEECC-CCCEEE
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIWNAER-GYK--VCVLDGDHPSAVQSLQFNP-KYHMLA 499 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~-~~~--~~~~~~~h~~~V~~l~~sp-~~~~la 499 (515)
++......+. ...+.++|+||++.|+.+. ..+.|+.|++.. ++. ...+. ..+..-.++..+ +|.+.+
T Consensus 211 --~~~~~~~~~l----~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 211 --NDVRVVAEGF----DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp --TCCEEEEEEE----SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSEEEEEEECTTTCCEEE
T ss_pred --CeEEEeecCC----cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CCCCCceEEEeCCCCcEEE
Confidence 4332222221 2268999999998887765 568899999863 432 22332 345678899999 598877
Q ss_pred Eee
Q psy6127 500 SAC 502 (515)
Q Consensus 500 s~~ 502 (515)
++.
T Consensus 283 a~~ 285 (355)
T 3sre_A 283 GCH 285 (355)
T ss_dssp EEE
T ss_pred Eec
Confidence 654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.064 Score=53.58 Aligned_cols=264 Identities=16% Similarity=0.116 Sum_probs=155.0
Q ss_pred EEEEeCCCeEEEEECCCCeeeeEecCCC-------------------------Cce--eEEEEe---cCCCeEEEEEeeC
Q psy6127 236 LISCSDDDQIIIYDCEQGTSKNTINSKK-------------------------YGV--DLIKFT---HSKTTAIHASTKV 285 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~~~~~~~~~~~~-------------------------~~v--~~~~~~---~~~~~l~~~s~~~ 285 (515)
+.||+..|.|+|+-+.+++.++.+.... +.. ..+++. .||+++++-- ..
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNd-ka 151 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFIND-KA 151 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEE-TT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEec-CC
Confidence 6788889999999999988887763210 011 122222 2455555443 45
Q ss_pred CCeEEEEECCCCeeeEEec-CCCCCeEEEEEc--CCCCEEEEEeC-------CCcE------------EEEEcCCCCeEE
Q psy6127 286 DATLRYLSLHDNKYVRYFP-GHVRKVSSLNLS--PVDDSFISGSY-------DKTV------------RVWDLRQPNNVG 343 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~~~l~s~s~-------dg~i------------~iwd~~~~~~~~ 343 (515)
+..|...+++..++-+.+. .....+..++|. |+-.+++.++. ||.. ...|..+.+...
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 7788888888877665543 345678888886 67778888774 3331 112333444433
Q ss_pred EEecCCCeeEEEECCCCCEEEEEECCC---------------cEEEEEeec-------CCCCC-----ceeeecCC----
Q psy6127 344 MIQLSGNKPIAAYDPEGLAFAIGVNSD---------------SIKLYDVRS-------YDKGP-----FASFKCPG---- 392 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~l~~g~~dg---------------~i~i~d~~~-------~~~~~-----~~~~~~~~---- 392 (515)
.....+....+..+++|.+.++.+.+. .+.+++... ++... ...+....
T Consensus 232 Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 232 QVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 333344444566788888887766432 355666432 11000 00110000
Q ss_pred --------CCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCC------ce---eEEeeccccCCCCCEEEEEecCCCE
Q psy6127 393 --------ERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNG------NC---VQSLSGVLNNNASPLEATFTPDSQF 454 (515)
Q Consensus 393 --------~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~------~~---~~~~~~~~~~~~~i~~~~~sp~g~~ 454 (515)
.......++.++|||+++++++ .+.++.++|++.- +. ...+.......-.....+|.++|.-
T Consensus 312 ~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~a 391 (638)
T 3sbq_A 312 DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNA 391 (638)
T ss_dssp CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEE
T ss_pred CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCce
Confidence 0011223688999999998877 4789999998742 11 0111111112223688999999955
Q ss_pred EEEEeCCCcEEEEECCCC----------eEEEEEcCCCCCCeEEEEE------CCCCCEEEEee
Q psy6127 455 VASGSTDGQVHIWNAERG----------YKVCVLDGDHPSAVQSLQF------NPKYHMLASAC 502 (515)
Q Consensus 455 l~sgs~dg~I~iwd~~~~----------~~~~~~~~~h~~~V~~l~~------sp~~~~las~~ 502 (515)
..+-.-|..|.-|++... ..+.++.. |-. +-.+.- .|||++|++..
T Consensus 392 YTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv-~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDV-HYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEEC-SSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeeeeecceEEEEeccHHHHHhcCccCCeeeecccc-ccC-CcccccCCCccCCCCccEEEEec
Confidence 555668999999998653 45666654 433 333332 67899998875
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.077 Score=50.48 Aligned_cols=241 Identities=12% Similarity=0.094 Sum_probs=128.6
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEe----cCCCCceeEEEEecC---CCeEEEE-EeeCC
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTI----NSKKYGVDLIKFTHS---KTTAIHA-STKVD 286 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~l~~~-s~~~d 286 (515)
+...-...+.|+|.|||+++++--..|.|++++..+++.. ..+ .........++++|+ +..+++. +...+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3344556789999999997776655899999987655432 222 123467889999996 4445443 32235
Q ss_pred CeEEEEECCCC----------eee-EEec-CCCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEEcCCC--
Q psy6127 287 ATLRYLSLHDN----------KYV-RYFP-GHVRKVSSLNLSPVDDSFISGSY-------------DKTVRVWDLRQP-- 339 (515)
Q Consensus 287 ~~v~vwd~~~~----------~~~-~~~~-~h~~~v~~l~~~~~~~~l~s~s~-------------dg~i~iwd~~~~-- 339 (515)
+.|.-|....+ +.+ ..+. .....-..+.|.|||.+.++.+. .|.|.-.+....
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 56766766541 111 1222 11223467999999987776542 244544454422
Q ss_pred -------CeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCC-------------CceeeecCCCCCcCe
Q psy6127 340 -------NNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKG-------------PFASFKCPGERGCEW 398 (515)
Q Consensus 340 -------~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~-------------~~~~~~~~~~~~~~i 398 (515)
..+.... ......++|+|+|.++++-. .++.=.+.-+..+..- ..........+....
T Consensus 187 ~~nPf~~~~i~a~G-~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 187 PGNPFPGSPVYSYG-HRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp TTCSSTTCCEEEBC-CSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred CCCCCCCCeEEeeC-CCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence 1122222 22366799999887666532 2332333333322110 000000011111244
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCceeEE-eeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS-LSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 399 ~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~-~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
..++|. +|..+...-..+.|....+........ ..........+..++..|||.++++..
T Consensus 266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 577776 355555555566676666654432111 001112234588999999997666543
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.011 Score=55.36 Aligned_cols=229 Identities=12% Similarity=0.101 Sum_probs=116.9
Q ss_pred CCCEEEEEe-CC-----CeEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeC----CCeEEEEECCCCe-
Q psy6127 232 DGSLLISCS-DD-----DQIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKV----DATLRYLSLHDNK- 298 (515)
Q Consensus 232 d~~~lasgs-~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~----d~~v~vwd~~~~~- 298 (515)
++.+++.|+ .+ ..+.+||..+++-... +.........+ .. +..+++.+|.. ...+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASV--SL-HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE--EE-TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEE--EE-CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 344555555 22 4688899887653321 11111111222 22 34555554422 2468999988765
Q ss_pred --eeEE--ecCCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEEEE
Q psy6127 299 --YVRY--FPGHVRKVSSLNLSPVDDSFISGSYD-----KTVRVWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 299 --~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~g~ 367 (515)
-... +......-..+.+ +++.++.|+.+ ..+.+||..+.+....-..... ...++. .+++.++.|+
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 167 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGG 167 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECC
T ss_pred CeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECC
Confidence 3222 2211122222222 46677777654 3588999988765544322221 112222 2677777776
Q ss_pred CC-----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCceeEEeeccc
Q psy6127 368 NS-----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 368 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~~~~~~~~~~~ 437 (515)
.+ ..+.+||..+...... ............+.+ +++.++.|+.+ ..+.+||+.+.+....-. ..
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p 241 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNV---TPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS-MT 241 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC-CS
T ss_pred CCCCcccceEEEEeCCCCcEEeC---CCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC-CC
Confidence 54 4588888876432211 111111111222333 56666677653 468999998876543221 11
Q ss_pred cCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeE
Q psy6127 438 NNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYK 474 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~ 474 (515)
...... .++ .-++++++.|+.+ ..+.+||+++.+-
T Consensus 242 ~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 242 TPRCYV-GAT-VLRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp SCCBSC-EEE-EETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred Ccccce-eEE-EECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 111112 222 2367777777765 3578899887653
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.03 Score=52.43 Aligned_cols=212 Identities=9% Similarity=0.026 Sum_probs=121.2
Q ss_pred EecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC--------------CcEEEEEc
Q psy6127 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD--------------KTVRVWDL 336 (515)
Q Consensus 271 ~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d--------------g~i~iwd~ 336 (515)
|++++..+++.....++.++..+.+.... ..+... . +--+++++.+|+-+... ..|+..++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~-~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNI-HKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSC-EEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCC-EEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 45678888887655567777777654443 333211 1 34557889888776543 36777787
Q ss_pred CCCCeEEEEecCCCeeEEEECCCCCEEEEEE--CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE
Q psy6127 337 RQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV--NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST 414 (515)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s 414 (515)
...+....... ....++++++.|+... .++.-.||-+........ .+... . + ..++|+++.|+-.+
T Consensus 96 dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~-~lt~~---~--~--~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 96 NGHGSTVLDPD----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK-KIKNH---Y--L--FTCNTSDRYFYYNN 163 (302)
T ss_dssp TSCCCEEEECS----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE-EEESS---C--C--CCSEEETTEEEEEC
T ss_pred CCCcceEeecC----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE-EEeCC---C--c--eEeeEECCEEEEEe
Confidence 77654333221 2336788999998876 455555665554322211 22211 1 1 34677888888766
Q ss_pred C-CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC--CcEEEEECCCCeEEEEEcCCCCCCeEEEEE
Q psy6127 415 N-GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD--GQVHIWNAERGYKVCVLDGDHPSAVQSLQF 491 (515)
Q Consensus 415 ~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d--g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 491 (515)
. ...|...++..+.....+.+ .....++|++++|+-...+ ..|..-+++.+. ...+.. ..+ ..|
T Consensus 164 ~g~~~Iy~~~l~g~~~~~l~~~-------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~---~~~--~~~ 230 (302)
T 3s25_A 164 PKNGQLYRYDTASQSEALFYDC-------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE---ANI--EHY 230 (302)
T ss_dssp TTTCCEEEEETTTTEEEEEECS-------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC---SCE--EEE
T ss_pred CCCceEEEEECCCCCEEEEeCC-------CccceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC---CCc--ceE
Confidence 5 57888888876654433321 1223467999988876543 356666665544 333322 233 347
Q ss_pred CCCCCEEEEee--CCEEEEcCCC
Q psy6127 492 NPKYHMLASAC--SNMAFWIPTL 512 (515)
Q Consensus 492 sp~~~~las~~--~dv~iW~~~~ 512 (515)
+|++.+|.-++ +.-.|+.++.
T Consensus 231 ~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 231 NVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EEETTEEEEEECSSSCEEEEEET
T ss_pred EECCCEEEEEECCCCcEEEEEEC
Confidence 77777776542 2245554443
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.015 Score=54.43 Aligned_cols=228 Identities=11% Similarity=0.151 Sum_probs=114.9
Q ss_pred CEEEEEeCC----CeEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeC----CCeEEEEECCCCeeeEE-
Q psy6127 234 SLLISCSDD----DQIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKV----DATLRYLSLHDNKYVRY- 302 (515)
Q Consensus 234 ~~lasgs~d----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~----d~~v~vwd~~~~~~~~~- 302 (515)
.+++.|+.+ ..+..||..+.+-... +......-..+.+ +..+++.+|.. -..+.+||..+.+-...
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE---CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 344445432 3578888877653322 1111111112222 44555554422 24688999888764332
Q ss_pred -ecCCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEEEECC-----
Q psy6127 303 -FPGHVRKVSSLNLSPVDDSFISGSYDK-----TVRVWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAIGVNS----- 369 (515)
Q Consensus 303 -~~~h~~~v~~l~~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~g~~d----- 369 (515)
+.........+.+ ++..++.|+.++ .+.+||+.+.+....-....+ ...++. .+++.++.|+.+
T Consensus 94 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTE
T ss_pred CCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCc
Confidence 2211112222222 467777777653 477889888765544322211 112222 256677776542
Q ss_pred --CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCceeEEeeccccCCCC
Q psy6127 370 --DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 370 --g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
..+.+||..+......... + ........+.+ +++.++.|+.+ ..+.+||..+.+....- .......
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~--p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~r~- 243 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEM--S-TRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA-DMNMCRR- 243 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCC--S-SCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC-CCSSCCB-
T ss_pred cccEEEEEeCCCCcEEECCCC--c-cccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCC-CCCCccc-
Confidence 3578888876432211111 1 11111222333 56677777653 46899999877544322 1111111
Q ss_pred CEEEEEecCCCEEEEEeCCC-----cEEEEECCCCeEE
Q psy6127 443 PLEATFTPDSQFVASGSTDG-----QVHIWNAERGYKV 475 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg-----~I~iwd~~~~~~~ 475 (515)
-..++ ..++++++.|+.++ .+.+||+.+.+-.
T Consensus 244 ~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 244 NAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp SCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred cCeEE-EECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 11222 23677777777653 4899999887644
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.16 Score=50.47 Aligned_cols=107 Identities=13% Similarity=0.168 Sum_probs=64.9
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEecC------CCCceeEEEEecC---CCeEEEEEeeC----
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTINS------KKYGVDLIKFTHS---KTTAIHASTKV---- 285 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~~~s~~~---- 285 (515)
-...+.|+|.|||+++++-...+.|++++..+++.. ..+.. .......++|+|+ +..++++....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345679999999987776544457888886555432 22221 2456779999996 66666665320
Q ss_pred -------CCeEEEEECCCC-------eeeE-EecC-CCCCeEEEEEcCCCCEEEEEeC
Q psy6127 286 -------DATLRYLSLHDN-------KYVR-YFPG-HVRKVSSLNLSPVDDSFISGSY 327 (515)
Q Consensus 286 -------d~~v~vwd~~~~-------~~~~-~~~~-h~~~v~~l~~~~~~~~l~s~s~ 327 (515)
...|.-++...+ +.+. .+.. .......++|.|||.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666655322 1111 1221 1234789999999997776543
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.013 Score=54.87 Aligned_cols=213 Identities=13% Similarity=0.142 Sum_probs=109.0
Q ss_pred CeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCC---eEEEEecCCC--eeEE
Q psy6127 287 ATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSYD-----KTVRVWDLRQPN---NVGMIQLSGN--KPIA 354 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd~~~~~---~~~~~~~~~~--~~~~ 354 (515)
..+.+||..+++-... +.........+. .++..++.|+.+ ..+.+||..+.+ ....-....+ ...+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 4688899887764322 221111122222 346677777755 468999998877 4443222211 1122
Q ss_pred EECCCCCEEEEEECC-----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEEC
Q psy6127 355 AYDPEGLAFAIGVNS-----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDA 424 (515)
Q Consensus 355 ~~s~~~~~l~~g~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~ 424 (515)
+. .+++.++.|+.+ ..+.+||..+......... +.. ...-..+.+ +++.++.|+.+ ..+.+||.
T Consensus 109 ~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~ 182 (301)
T 2vpj_A 109 TT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM--QTA-REGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDP 182 (301)
T ss_dssp EE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC--SSC-CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred EE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCC--CCC-cccceEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence 22 266777777643 3578888766432221111 111 111222223 66666676643 46899998
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeEEEEEcCCCC-CCeEEEEECCCCCEE
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYKVCVLDGDHP-SAVQSLQFNPKYHML 498 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~l 498 (515)
.+.+....-. ...... -.+++ ..++++++.|+.+ ..+.+||+.+.+-...-..... .....+.+ +++++
T Consensus 183 ~~~~W~~~~~-~p~~r~-~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~ 257 (301)
T 2vpj_A 183 HTGHWTNVTP-MATKRS-GAGVA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLY 257 (301)
T ss_dssp TTTEEEEECC-CSSCCB-SCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEE
T ss_pred CCCcEEeCCC-CCcccc-cceEE-EECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEE
Confidence 8876543311 111111 11222 2357777777754 4689999988765443221111 11222222 56676
Q ss_pred EEeeC-------CEEEEcCCC
Q psy6127 499 ASACS-------NMAFWIPTL 512 (515)
Q Consensus 499 as~~~-------dv~iW~~~~ 512 (515)
+.|+. ++.+||++.
T Consensus 258 v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 258 AIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp EECCBCSSSBEEEEEEEETTT
T ss_pred EEcCcCCCcccccEEEEcCCC
Confidence 76652 356666653
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.019 Score=53.84 Aligned_cols=224 Identities=12% Similarity=0.105 Sum_probs=114.8
Q ss_pred CeEEEEEee-CCCeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCCeEEEEecC
Q psy6127 276 TTAIHASTK-VDATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSYD----KTVRVWDLRQPNNVGMIQLS 348 (515)
Q Consensus 276 ~~l~~~s~~-~d~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~ 348 (515)
+.+++.+|. ....+.+||..+++-... +......-..+. -++..++.|+.+ ..+.+||..+.+....-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 445555442 256789999988764322 221112222222 246677777755 66889999888655443222
Q ss_pred CC--eeEEEECCCCCEEEEEECC------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-----
Q psy6127 349 GN--KPIAAYDPEGLAFAIGVNS------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN----- 415 (515)
Q Consensus 349 ~~--~~~~~~s~~~~~l~~g~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~----- 415 (515)
.+ -..++ ..+++.++.|+.+ ..+.+||..+......... +. ....-..+.+ +++.++.|+.
T Consensus 90 ~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~--p~-~r~~~~~~~~--~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 90 TPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM--LT-QRCSHGMVEA--NGLIYVCGGSLGNNV 163 (306)
T ss_dssp SCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC--SS-CCBSCEEEEE--TTEEEEECCEESCTT
T ss_pred ccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC--cC-CcceeEEEEE--CCEEEEECCCCCCCC
Confidence 21 11222 2267777777754 4588888876432111111 11 1111122222 5566666652
Q ss_pred ----CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeEEEEEcCC-CCCC
Q psy6127 416 ----GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYKVCVLDGD-HPSA 485 (515)
Q Consensus 416 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~-h~~~ 485 (515)
-..+.+||..+.+....-. ...... -.+++.. ++++++.|+.+ ..+.+||+.+.+-...-... ....
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 240 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCP-MIEARK-NHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVT 240 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECC-CSSCCB-SCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSC
T ss_pred cccccceEEEeCCCCCeEEECCC-ccchhh-cceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccc
Confidence 3458899998875433221 111111 1222222 66777777653 46899999887544322111 1112
Q ss_pred eEEEEECCCCCEEEEee-------CCEEEEcCCC
Q psy6127 486 VQSLQFNPKYHMLASAC-------SNMAFWIPTL 512 (515)
Q Consensus 486 V~~l~~sp~~~~las~~-------~dv~iW~~~~ 512 (515)
...+.+ ++++++.|+ .++.+||++.
T Consensus 241 ~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 241 VKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp CEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred eeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 223333 566777665 2366666654
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.078 Score=49.55 Aligned_cols=236 Identities=8% Similarity=0.013 Sum_probs=129.2
Q ss_pred cCCCCEEEEEe--CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC------------CCeEEEEECC
Q psy6127 230 SSDGSLLISCS--DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV------------DATLRYLSLH 295 (515)
Q Consensus 230 spd~~~lasgs--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~------------d~~v~vwd~~ 295 (515)
++++.+++... .++.+...+.+ |.....+... .+--++++++.++.+.... ...|+..++.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 34666666654 24666666654 3334444322 2345689999999887422 3568888887
Q ss_pred CCeeeEEecCCCCCeEEEEEcCCCCEEEEEe--C--CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEEC-CC
Q psy6127 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGS--Y--DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVN-SD 370 (515)
Q Consensus 296 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s--~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg 370 (515)
.++....... . ...|+++++.|+-.. . +..|..-++........... . . ..++|+++.|...+. ..
T Consensus 97 g~~~~~l~~~---~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~-~-~--~~~~~~g~~iy~t~~g~~ 167 (302)
T 3s25_A 97 GHGSTVLDPD---P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH-Y-L--FTCNTSDRYFYYNNPKNG 167 (302)
T ss_dssp SCCCEEEECS---C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS-C-C--CCSEEETTEEEEECTTTC
T ss_pred CCcceEeecC---C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC-C-c--eEeeEECCEEEEEeCCCc
Confidence 7654333221 1 236777899888776 2 34566666664443333332 2 2 456788888887665 45
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC--CcEEEEECCCCceeEEeeccccCCCCCEEEEE
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG--SIIRLFDAFNGNCVQSLSGVLNNNASPLEATF 448 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d--g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 448 (515)
.|...++..... ..+ . .. .. ...++|++.+|+-...+ ..|..-++.... ...+.. . .+ ..|
T Consensus 168 ~Iy~~~l~g~~~---~~l-~-~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~---~--~~--~~~ 230 (302)
T 3s25_A 168 QLYRYDTASQSE---ALF-Y-DC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE---A--NI--EHY 230 (302)
T ss_dssp CEEEEETTTTEE---EEE-E-CS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC---S--CE--EEE
T ss_pred eEEEEECCCCCE---EEE-e-CC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC---C--Cc--ceE
Confidence 666666554321 111 1 11 12 23456999998877644 356555655443 233321 1 12 348
Q ss_pred ecCCCEEEEEeC--CCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 449 TPDSQFVASGST--DGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 449 sp~g~~l~sgs~--dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
+|++++|+-++. .+.|..-+++.... ..+.. . .+.. +++.+.++.-.+
T Consensus 231 ~~~g~~Iy~~~~~~~~~i~~~~~DG~~r-~~l~~-~--~~~~--i~i~~d~Iy~td 280 (302)
T 3s25_A 231 NVYGSLIFYQRGGDNPALCVVKNDGTGF-KELAK-G--EFCN--INVTSQYVYFTD 280 (302)
T ss_dssp EEETTEEEEEECSSSCEEEEEETTSCCC-EEEEE-S--CEEE--EEECSSEEEEEE
T ss_pred EECCCEEEEEECCCCcEEEEEECCCCcc-EEeeC-C--ccce--EEEeCCEEEEEE
Confidence 888998876532 35677777654332 22221 1 2333 344555665554
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.042 Score=53.15 Aligned_cols=148 Identities=14% Similarity=0.177 Sum_probs=100.7
Q ss_pred EEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC----CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-----
Q psy6127 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH----VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN----- 340 (515)
Q Consensus 270 ~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~----- 340 (515)
....++..++++. ++.||.-++..+..-+.+.-. -..|..+..+|+|++|+..+. ..|.|-.+..+.
T Consensus 27 ~~~~n~t~i~~a~---~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ---DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EEETTTTEEEEEE---TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCC
T ss_pred EEEcCCCEEEEEE---CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcc
Confidence 3455667777775 788888887754434444322 235788999999999988764 678888876321
Q ss_pred -------eEEEEec-------CCCeeEEEECCC---CCEEEEEECCCcEEEEEeecCCCCCceeeec------CCCCCcC
Q psy6127 341 -------NVGMIQL-------SGNKPIAAYDPE---GLAFAIGVNSDSIKLYDVRSYDKGPFASFKC------PGERGCE 397 (515)
Q Consensus 341 -------~~~~~~~-------~~~~~~~~~s~~---~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~------~~~~~~~ 397 (515)
..+.+.. ..++..+.|+|- +..|++-..|+.|++||+......+. .+.. .......
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVND 181 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCC
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccce
Confidence 1223332 345888999994 56899999999999999987443333 2211 1223367
Q ss_pred eEEEEEcCCCCEEEEEE--CCCcEEEE
Q psy6127 398 WTGLKFSPDGKLILVST--NGSIIRLF 422 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s--~dg~i~iw 422 (515)
+.+++|.+++-.|...+ ++|.|+-.
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 88999999887777755 77887643
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.038 Score=51.96 Aligned_cols=230 Identities=12% Similarity=0.146 Sum_probs=114.7
Q ss_pred EEEEEeCCCeEEEEECCCCeeee-EecCCCCceeEEEEecCCCeEEEEEee------CC----CeEEEEECCCCeeeEE-
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKN-TINSKKYGVDLIKFTHSKTTAIHASTK------VD----ATLRYLSLHDNKYVRY- 302 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~~------~d----~~v~vwd~~~~~~~~~- 302 (515)
+++.|+ ..+..||..+++-.. .+..............++ .+++.+|. .. ..+..||..+++-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344555 578999998876432 122111222222333344 45555442 11 2378889888764322
Q ss_pred -ecCCCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEEcCCCCeEEEEecCCC-eeEEEECCCCCEEEEEEC-C--
Q psy6127 303 -FPGHVRKVSSLNLSPVDDSFISGSYD--------KTVRVWDLRQPNNVGMIQLSGN-KPIAAYDPEGLAFAIGVN-S-- 369 (515)
Q Consensus 303 -~~~h~~~v~~l~~~~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~-~~~~~~s~~~~~l~~g~~-d-- 369 (515)
+......-..+.+ ++..++.|+.+ ..+.+||..+.+....-..+.+ ....+...+++.++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTS
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCC
Confidence 1111111122222 46666777642 4588999988764433222211 111222246667777765 2
Q ss_pred ---CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC-----cEEEEECCCCceeEEeeccccCCC
Q psy6127 370 ---DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-----IIRLFDAFNGNCVQSLSGVLNNNA 441 (515)
Q Consensus 370 ---g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~ 441 (515)
..+.+||..+.......... .....-..+.+ +++.++.|+.++ .+.+||..+.+....-. ......
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~ 235 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQ---TARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA-FPQERS 235 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCS---SCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC-CSSCCB
T ss_pred cccceEEEEeCCCCeEEECCCCC---CchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCC-CCCccc
Confidence 46888888764322111111 11111122333 666777777543 58899988775443221 111111
Q ss_pred CCEEEEEecCCCEEEEEeCC--------------CcEEEEECCCCeEEEE
Q psy6127 442 SPLEATFTPDSQFVASGSTD--------------GQVHIWNAERGYKVCV 477 (515)
Q Consensus 442 ~i~~~~~sp~g~~l~sgs~d--------------g~I~iwd~~~~~~~~~ 477 (515)
-.+++ .-++++++.|+.+ ..+.+||+.+.+-...
T Consensus 236 -~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 236 -SLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -SCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -ceeEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 11222 2356777777753 2477889888765544
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.36 Score=51.49 Aligned_cols=261 Identities=10% Similarity=0.117 Sum_probs=149.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEe-cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
...|.++.-..+| +|..|..+| +..||-.+-+..... ......|.++.-..++ .+.+++ +.-+..||..+.+.
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT---~~Gl~~yd~~~~~f 94 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGT---DNGILVYNYRADRY 94 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEE---TTEEEEEETTTTEE
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEe---CCCeEEEeCCCCEE
Confidence 5679999888887 456677777 556764321111100 1123457787766654 556555 45688999887754
Q ss_pred eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-----cCCCeeEEEECCCCCEEEEEECCCcEEE
Q psy6127 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-----LSGNKPIAAYDPEGLAFAIGVNSDSIKL 374 (515)
Q Consensus 300 ~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~~s~~~~~l~~g~~dg~i~i 374 (515)
..........|.++.. .++ .|..++.+ -+..+|..+++...... ....+.++..+.+|.+.+ |+.+ -+..
T Consensus 95 ~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~ 169 (758)
T 3ott_A 95 EQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCR 169 (758)
T ss_dssp CCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEE
T ss_pred ECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhh
Confidence 4321112345777654 344 56666665 68889987765443211 123467777787777655 4444 4667
Q ss_pred EEeecCCCCCceeeecCC---CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 375 YDVRSYDKGPFASFKCPG---ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~---~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
|+..... ........ .....|.++...+++..|..|+. +-+..+|..+++... +.... ...|.++...++
T Consensus 170 ~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l~--~~~i~~i~~d~~ 242 (758)
T 3ott_A 170 YIPSNGK---FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAFH--NNSIKSLALDGN 242 (758)
T ss_dssp EETTTTE---EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEEE--EEEEEEEEECTT
T ss_pred CccCCCc---eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCCC--CCeEEEEEEcCC
Confidence 7755422 11111111 11234788888887776556664 458889987765432 21111 112777877777
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEcC------CCCCCeEEEEECCCCCEEEEe
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYKVCVLDG------DHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~~~~~~~------~h~~~V~~l~~sp~~~~las~ 501 (515)
|.+.+ |+.+ -+.+++..+++....... -....|.++....+|.+-+..
T Consensus 243 g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 243 GDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp CCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 77555 4444 488898876654322211 023468999888887655444
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.044 Score=51.25 Aligned_cols=227 Identities=10% Similarity=0.038 Sum_probs=117.0
Q ss_pred CEEEEEeC--CCeEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEee---CCCeEEEEECCCCeeeEE--ec
Q psy6127 234 SLLISCSD--DDQIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTK---VDATLRYLSLHDNKYVRY--FP 304 (515)
Q Consensus 234 ~~lasgs~--dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~---~d~~v~vwd~~~~~~~~~--~~ 304 (515)
.+++.|+. ...+.+||..+++-... +........++. . +..+++.+|. ....+.+||..+++-... +.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--W-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--E-TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--E-CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 34555654 35788999887654322 221112222222 2 3455555542 236788999988764332 22
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEEEEC--------
Q psy6127 305 GHVRKVSSLNLSPVDDSFISGSYD------KTVRVWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAIGVN-------- 368 (515)
Q Consensus 305 ~h~~~v~~l~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~g~~-------- 368 (515)
........+.+ +++.++.|+.+ ..+.+||..+.+....-....+ ...++. .+++.++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCE
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCccc
Confidence 11122222222 56777777765 4588999988765443222211 112222 36667777653
Q ss_pred -CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCceeEEeeccccCCCC
Q psy6127 369 -SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNGNCVQSLSGVLNNNAS 442 (515)
Q Consensus 369 -dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~ 442 (515)
...+.+||..+......... ......-..+.+ +++.++.|+.+ ..+.+||..+.+-... .........
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~ 240 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPM---IEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV-SPMPWKGVT 240 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCC---SSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEEC-CCCSCCBSC
T ss_pred ccceEEEeCCCCCeEEECCCc---cchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC-CCCCCCccc
Confidence 34588888876532211111 111111222223 56666666543 4688999987754332 111111111
Q ss_pred CEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeE
Q psy6127 443 PLEATFTPDSQFVASGSTD-----GQVHIWNAERGYK 474 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~ 474 (515)
...+.+ ++++++.|+.+ ..+.+||..+.+-
T Consensus 241 ~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 241 VKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp CEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred eeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 223333 67788888754 4689999988643
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.10 E-value=0.54 Score=52.44 Aligned_cols=168 Identities=13% Similarity=0.125 Sum_probs=100.2
Q ss_pred cEEEEEcCCCCeEEEEecCCC--eeEEE---ECC-CCCEEEEEE----------CCCcEEEEEeecCCCCCceeeecCCC
Q psy6127 330 TVRVWDLRQPNNVGMIQLSGN--KPIAA---YDP-EGLAFAIGV----------NSDSIKLYDVRSYDKGPFASFKCPGE 393 (515)
Q Consensus 330 ~i~iwd~~~~~~~~~~~~~~~--~~~~~---~s~-~~~~l~~g~----------~dg~i~i~d~~~~~~~~~~~~~~~~~ 393 (515)
.|++.|..+.+.+..+..... +.+++ |.. ...++++|+ ..|.|.+|++...+ ..+.....
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k----L~lv~~~~ 883 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK----LQTVAEKE 883 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTE----EEEEEEEE
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCE----EEEEEEEE
Confidence 477888888887776655433 33333 332 246888887 35789999998322 12222223
Q ss_pred CCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEE--EECCC
Q psy6127 394 RGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHI--WNAER 471 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~i--wd~~~ 471 (515)
..+++++++-- +| +|++|- .+.+++|++...+.++.-.....+ +..+.....+.+++.|..-..|.+ |+...
T Consensus 884 v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~---i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~ 957 (1158)
T 3ei3_A 884 VKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNN---IMALYLKTKGDFILVGDLMRSVLLLAYKPME 957 (1158)
T ss_dssp ESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCC---SCEEEEEEETTEEEEEESSBCEEEEEEETTT
T ss_pred cCCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeecccc---EEEEEEeccCCEEEEEEhhheEEEEEEEcCC
Confidence 45677777643 44 555544 478999999876544411111111 333344445788999987666666 55556
Q ss_pred CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEE
Q psy6127 472 GYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508 (515)
Q Consensus 472 ~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW 508 (515)
++....-...+...++++.+-.++ .++.++....+|
T Consensus 958 ~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~ 993 (1158)
T 3ei3_A 958 GNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLF 993 (1158)
T ss_dssp TEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEE
T ss_pred CeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEE
Confidence 665555544467789999987665 555577554443
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.041 Score=51.34 Aligned_cols=214 Identities=14% Similarity=0.162 Sum_probs=107.0
Q ss_pred CeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCCeEEEEecCCC--eeEEEEC
Q psy6127 287 ATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSYD-----KTVRVWDLRQPNNVGMIQLSGN--KPIAAYD 357 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~--~~~~~~s 357 (515)
..+..||+.+.+-... +......-..+.+ ++..++.|+.+ ..+.+||..+.+....-....+ -..++.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV- 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-
Confidence 4678888887754322 1111111122222 46677777754 3588999988765544322211 112222
Q ss_pred CCCCEEEEEECCC-----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-------CCcEEEEECC
Q psy6127 358 PEGLAFAIGVNSD-----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-------GSIIRLFDAF 425 (515)
Q Consensus 358 ~~~~~l~~g~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-------dg~i~iwd~~ 425 (515)
.++..++.|+.++ .+.+||..+..... .............+.+ +++.++.|+. -..+.+||..
T Consensus 107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~---~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~ 181 (302)
T 2xn4_A 107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH---VAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNAT 181 (302)
T ss_dssp ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE---ECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETT
T ss_pred ECCEEEEEcCCCCCccCceEEEEeCCCCeEee---cCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCC
Confidence 2677777777553 46777776543211 1111111111222222 5566666653 2458899998
Q ss_pred CCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEE
Q psy6127 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500 (515)
Q Consensus 426 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las 500 (515)
+.+....-. ...... -.+++. -++++++.|+.+ ..+.+||+.+++-...-.......-.+++. -++++++.
T Consensus 182 ~~~W~~~~~-~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~ 257 (302)
T 2xn4_A 182 TNEWTYIAE-MSTRRS-GAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVV 257 (302)
T ss_dssp TTEEEEECC-CSSCCB-SCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEE
T ss_pred CCcEEECCC-Cccccc-cccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEE
Confidence 776443211 111111 122222 367777777754 369999998876544322111111111222 25666666
Q ss_pred eeC-------CEEEEcCCC
Q psy6127 501 ACS-------NMAFWIPTL 512 (515)
Q Consensus 501 ~~~-------dv~iW~~~~ 512 (515)
|+. ++.+||+..
T Consensus 258 GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp CCBCSSSBCCCEEEEETTT
T ss_pred CCcCCCcccccEEEEcCCC
Confidence 652 367777654
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.064 Score=51.93 Aligned_cols=148 Identities=14% Similarity=0.182 Sum_probs=95.8
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-----CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCC-------
Q psy6127 317 PVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-----GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGP------- 384 (515)
Q Consensus 317 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~------- 384 (515)
.+|..++.+- ++.||.-++.....-+.+..+ ..+..+..+|+|++||.. .+..|.|..+..+....
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCccccccc
Confidence 3455555443 467777777754444555443 247789999999999987 46689999887432111
Q ss_pred -ce--eeecC---CCCCcCeEEEEEcCC---CCEEEEEECCCcEEEEECCCCc--eeEEee------ccccCCCCCEEEE
Q psy6127 385 -FA--SFKCP---GERGCEWTGLKFSPD---GKLILVSTNGSIIRLFDAFNGN--CVQSLS------GVLNNNASPLEAT 447 (515)
Q Consensus 385 -~~--~~~~~---~~~~~~i~~l~~sp~---~~~l~~~s~dg~i~iwd~~~~~--~~~~~~------~~~~~~~~i~~~~ 447 (515)
.+ .+... .....+|..+.|+|- +..|++-..|+.|++||+.... +. .+. +.......+.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 11 11211 113568999999994 5689999999999999997532 11 222 1222235588999
Q ss_pred EecCCCEEEEEe--CCCcEEEE
Q psy6127 448 FTPDSQFVASGS--TDGQVHIW 467 (515)
Q Consensus 448 ~sp~g~~l~sgs--~dg~I~iw 467 (515)
|.+++-.|+..+ .+|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999887777655 77887653
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.034 Score=61.79 Aligned_cols=235 Identities=12% Similarity=0.132 Sum_probs=135.7
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
..+|.|.|+.++..+...+ -...+.-.+|..+.+++-+ ..++.++|+++...+..+.- ..+|.-=.|-.+..
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra---g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~- 118 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA---GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT- 118 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec---CCeEEEeehHHhhhhccccc-CCCceEEEecCCCe-
Confidence 3478888888765442211 1122334567776555543 78999999999888777664 34566667764433
Q ss_pred EEEEeCCCcEEEEEcCCC-CeEEEEecC-----CCeeEEEECCCCCEEEEEE-------CCCcEEEEEeecCCCCCceee
Q psy6127 322 FISGSYDKTVRVWDLRQP-NNVGMIQLS-----GNKPIAAYDPEGLAFAIGV-------NSDSIKLYDVRSYDKGPFASF 388 (515)
Q Consensus 322 l~s~s~dg~i~iwd~~~~-~~~~~~~~~-----~~~~~~~~s~~~~~l~~g~-------~dg~i~i~d~~~~~~~~~~~~ 388 (515)
|+..+ +..|.-|++... .+.+.+..+ ..+.....+++.++++..+ -.|.+.+|..+....+.
T Consensus 119 l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~---- 193 (1630)
T 1xi4_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP---- 193 (1630)
T ss_pred eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh----
Confidence 33332 467999999642 333333222 2355566788888877543 34788899887643221
Q ss_pred ecCCCCCcCeEEEEEc--CC-CCEEEEEE---CCCcEEEEECCCC---cee------EEeeccccCCCCCEEEEEecCCC
Q psy6127 389 KCPGERGCEWTGLKFS--PD-GKLILVST---NGSIIRLFDAFNG---NCV------QSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 389 ~~~~~~~~~i~~l~~s--p~-~~~l~~~s---~dg~i~iwd~~~~---~~~------~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
..+|......+... +. ...+..+. ..+.++|.++... .+. ..+.........+.++..++...
T Consensus 194 --iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g 271 (1630)
T 1xi4_A 194 --IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (1630)
T ss_pred --hhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC
Confidence 12332222222221 11 12222222 1367888887542 111 11111111233457788888888
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEEC
Q psy6127 454 FVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 454 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 492 (515)
.++.-+.-|.+++||+.+|.++..-+- ...+|...+-+
T Consensus 272 ~iy~itk~G~~~~~d~~t~~~i~~~ri-s~~~iF~~~~~ 309 (1630)
T 1xi4_A 272 VVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPH 309 (1630)
T ss_pred EEEEEecCceEEEEecccchhhhhccc-cCCceEEeccC
Confidence 899999999999999999988876554 44455444443
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.064 Score=50.23 Aligned_cols=230 Identities=9% Similarity=0.039 Sum_probs=116.5
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEee--------CCCeEEEEECCCC
Q psy6127 232 DGSLLISCSDD----DQIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTK--------VDATLRYLSLHDN 297 (515)
Q Consensus 232 d~~~lasgs~d----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~--------~d~~v~vwd~~~~ 297 (515)
++.+++.|+.+ ..+.+||..+++-... +.........+. . +..+++.+|. ....+.+||..+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV--V-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--E-TTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE--E-CCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 45566666532 4688888877654322 111111111222 2 3455555442 1246889998887
Q ss_pred eeeEE--ecCCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEEEEC
Q psy6127 298 KYVRY--FPGHVRKVSSLNLSPVDDSFISGSYD-----KTVRVWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAIGVN 368 (515)
Q Consensus 298 ~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~g~~ 368 (515)
+-... +.........+.+ +++.++.|+.+ ..+.+||..+.+....-..... ..+++.. ++..++.|+.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 177 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGF 177 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCC
Confidence 54322 2211122222223 46677776643 4588899987765443222211 1122222 6677777765
Q ss_pred C-----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCceeEEeecccc
Q psy6127 369 S-----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNGNCVQSLSGVLN 438 (515)
Q Consensus 369 d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~~~~~~~~~~~~ 438 (515)
+ ..+.+||..+......... .........+.+ +++.++.|+.+ ..+.+||+.+.+....-. ...
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~ 251 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAM---NTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP-MKH 251 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC-CSS
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCC---CCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC-CCC
Confidence 4 4588888876432211111 111112223333 56666777653 568999998875443221 111
Q ss_pred CCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeEE
Q psy6127 439 NNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYKV 475 (515)
Q Consensus 439 ~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~~ 475 (515)
... -.+++. -++++++.|+.+ ..+.+||+.+.+-.
T Consensus 252 ~r~-~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 252 RRS-ALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp CCB-SCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred Ccc-ceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 111 122222 367777777754 35888998876543
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.042 Score=61.11 Aligned_cols=200 Identities=12% Similarity=0.189 Sum_probs=121.1
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC-CeeeEEecCC-
Q psy6127 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD-NKYVRYFPGH- 306 (515)
Q Consensus 229 ~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~-~~~~~~~~~h- 306 (515)
.+|..+.+|.-. ..++.|+|+++.+.++.+...+ +|.--.|-... .+.+++ +..|+-|++.. ..++..+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~-~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT---DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCC-eeEEEc---CCeEEEeccCCCCccHHHHhcch
Confidence 677777776654 6899999999888777766543 46666666543 455665 88999999964 3455555545
Q ss_pred ---CCCeEEEEEcCCCCEEEEEe-------CCCcEEEEEcCCCCeEEEEecCCCeeEEEE---CCCCCEEEEEEC---CC
Q psy6127 307 ---VRKVSSLNLSPVDDSFISGS-------YDKTVRVWDLRQPNNVGMIQLSGNKPIAAY---DPEGLAFAIGVN---SD 370 (515)
Q Consensus 307 ---~~~v~~l~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---s~~~~~l~~g~~---dg 370 (515)
...|..-..+++.++++..| -.|.+.+|..+.+.....-.+...-..+.. .+....++.+.. .+
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~ 226 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCc
Confidence 45677778888888766443 347788888776533211111110000111 111223333322 36
Q ss_pred cEEEEEeecC-C-CCCce--e--eec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 371 SIKLYDVRSY-D-KGPFA--S--FKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 371 ~i~i~d~~~~-~-~~~~~--~--~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
.++|.++... . ..+.. . +.. +.....-..++..++....+..-+.-|.+.+||+.+|.++..-.
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred eEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 8888888653 1 11110 1 111 11112223378888888888889999999999999998875443
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.024 Score=54.46 Aligned_cols=237 Identities=8% Similarity=0.016 Sum_probs=112.4
Q ss_pred CCCEEEEEeCC-CeEEEEECCC--Ce--eeeEec-CCCCceeEEEEecCCCeEEEEEee-C--------CCeEEEEECCC
Q psy6127 232 DGSLLISCSDD-DQIIIYDCEQ--GT--SKNTIN-SKKYGVDLIKFTHSKTTAIHASTK-V--------DATLRYLSLHD 296 (515)
Q Consensus 232 d~~~lasgs~d-g~i~iwd~~~--~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~~-~--------d~~v~vwd~~~ 296 (515)
++++++.|+.+ ..+.++|..+ .+ .+..+. .....-.++.+ +..+++.+|. . -..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI---DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE---TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE---CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 56666666543 5688888863 22 222222 11111222222 3455555543 1 24689999988
Q ss_pred CeeeEEecCC-CC-CeEEEEEcCCCCEEEEEeCC---------------------------------------CcEEEEE
Q psy6127 297 NKYVRYFPGH-VR-KVSSLNLSPVDDSFISGSYD---------------------------------------KTVRVWD 335 (515)
Q Consensus 297 ~~~~~~~~~h-~~-~v~~l~~~~~~~~l~s~s~d---------------------------------------g~i~iwd 335 (515)
.+-...-... .. .-.++.. .+++.++.|+.+ ..+.+||
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred CcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 7643321111 11 1122222 457777888765 5789999
Q ss_pred cCCCCeEEEEecCC--Ce-eEEEECCCCCEEEEEEC------CCcEEEEEe--ecCCCCCceeeecCCCCCcCeEEEEEc
Q psy6127 336 LRQPNNVGMIQLSG--NK-PIAAYDPEGLAFAIGVN------SDSIKLYDV--RSYDKGPFASFKCPGERGCEWTGLKFS 404 (515)
Q Consensus 336 ~~~~~~~~~~~~~~--~~-~~~~~s~~~~~l~~g~~------dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~i~~l~~s 404 (515)
..+.+....-.... .. .+++. .+++.++.|+. ...+..||+ .+.... ...............+..
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~---~~~~~~~~~~~~~~~~~~ 250 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN---KLAPVSSPDGVAGGFAGI 250 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEE---ECCCSSTTTCCBSCEEEE
T ss_pred CCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEE---ecCCCCCCcccccceEEE
Confidence 98876655433221 11 22222 25666666653 345677776 332211 111111111111111122
Q ss_pred CCCCEEEEEECC----------------------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCC
Q psy6127 405 PDGKLILVSTNG----------------------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDG 462 (515)
Q Consensus 405 p~~~~l~~~s~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg 462 (515)
.+++.++.|+.+ ..+.+||+.+.+....-. ....... ..+...++++++.|+.++
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~--~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE-LSQGRAY--GVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE-CSSCCBS--SEEEEETTEEEEEEEECG
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC-CCCCccc--ceeEEeCCEEEEEeeeCC
Confidence 256666666532 257889988765433211 1111111 222334678888888543
Q ss_pred ------cEEEEECCCCeEEEEEc
Q psy6127 463 ------QVHIWNAERGYKVCVLD 479 (515)
Q Consensus 463 ------~I~iwd~~~~~~~~~~~ 479 (515)
.|.++++++++.+...+
T Consensus 328 ~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 328 GGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp GGCEEEEEEEEEC-CCSCEEEC-
T ss_pred CCCEeeeEEEEEEcCcEeEeeec
Confidence 36666888877665443
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.045 Score=51.85 Aligned_cols=195 Identities=10% Similarity=0.020 Sum_probs=107.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCC-CceeEEEE--ecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC----C
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKK-YGVDLIKF--THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG----H 306 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~----h 306 (515)
..++.++.||.|.-.|.++|+...+++... .++....- .+.+..++++....||.+..++..+|.....+.- .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 478889999999999999999999887641 12221110 0112244444223699999999988865443321 1
Q ss_pred CCCeEE---EEE-----cCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCee--------EEEEC-----CCCCEEEE
Q psy6127 307 VRKVSS---LNL-----SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKP--------IAAYD-----PEGLAFAI 365 (515)
Q Consensus 307 ~~~v~~---l~~-----~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~--------~~~~s-----~~~~~l~~ 365 (515)
..++.. ... ...+..+++|+.+|.+...|+++|+.+..+....... |.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 222221 000 0135678999999999999999999999986553211 11111 12356666
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCC--CCcCe-EEEEEcCCCCEEEEEECCCcEEEEECCCCceeE
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGE--RGCEW-TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ 431 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~i-~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~ 431 (515)
+..+..+.+.+ ++++ .-...+..... ....+ ..-..+.|+.+ +.++.||.|.-+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 66665555554 2221 00000000000 00000 00001124555 457888999999888887654
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.091 Score=49.40 Aligned_cols=222 Identities=10% Similarity=0.108 Sum_probs=109.9
Q ss_pred eEEEEECCCCeeee-EecCCCCceeEEEEecCCCeEEEEEee---CCC-------eEEEEECCCCeeeEE--ecCCCCCe
Q psy6127 244 QIIIYDCEQGTSKN-TINSKKYGVDLIKFTHSKTTAIHASTK---VDA-------TLRYLSLHDNKYVRY--FPGHVRKV 310 (515)
Q Consensus 244 ~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~~---~d~-------~v~vwd~~~~~~~~~--~~~h~~~v 310 (515)
.+..||..+++-.. .+............. .+..+++.+|. .++ .+.+||..+++-... +.......
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVT-QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEEC-SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred ceEEECCCCCceecccCCccCCccceEEEE-ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 47888988776443 112111111222223 34455555541 111 277889887764332 11111112
Q ss_pred EEEEEcCCCCEEEEEeCC-------CcEEEEEcCCCCeEEEEecCCCe--eEEEECCCCCEEEEEEC------CCcEEEE
Q psy6127 311 SSLNLSPVDDSFISGSYD-------KTVRVWDLRQPNNVGMIQLSGNK--PIAAYDPEGLAFAIGVN------SDSIKLY 375 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~~--~~~~~s~~~~~l~~g~~------dg~i~i~ 375 (515)
..+.+ ++..++.|+.+ ..+.+||..+.+....-....+. .+++. .+++.++.|+. ...+.+|
T Consensus 104 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 104 GLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred ceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 22222 46777777754 34788898887655443222211 12222 46677777753 2358888
Q ss_pred EeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 376 DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
|..+......... .........+.+ +++.++.|+.+ ..+.+||+.+.+.... ........ -.+++ ..
T Consensus 181 d~~~~~W~~~~~~---p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~-~~~~~-~~ 252 (318)
T 2woz_A 181 NPKKGDWKDLAPM---KTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM-TEFPQERS-SISLV-SL 252 (318)
T ss_dssp ETTTTEEEEECCC---SSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEEC-CCCSSCCB-SCEEE-EE
T ss_pred cCCCCEEEECCCC---CCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEEC-CCCCCccc-ceEEE-EE
Confidence 8876432211111 111111222332 56666777643 3577899887754332 11111111 11222 23
Q ss_pred CCCEEEEEeCC--------------CcEEEEECCCCeEEEE
Q psy6127 451 DSQFVASGSTD--------------GQVHIWNAERGYKVCV 477 (515)
Q Consensus 451 ~g~~l~sgs~d--------------g~I~iwd~~~~~~~~~ 477 (515)
++++++.|+.+ ..+.+||+.+.+-...
T Consensus 253 ~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 253 AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 56777777653 3588899888765544
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.048 Score=51.11 Aligned_cols=213 Identities=11% Similarity=0.056 Sum_probs=105.9
Q ss_pred CeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeC----C-----CcEEEEEcCCCCeEEEEecCCC--eeE
Q psy6127 287 ATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSY----D-----KTVRVWDLRQPNNVGMIQLSGN--KPI 353 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~----d-----g~i~iwd~~~~~~~~~~~~~~~--~~~ 353 (515)
..+.+||..+++-... +......- +++. .++..++.|+. + ..+.+||..+.+....-....+ -..
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 4688888887754332 11111111 2222 24666677665 2 4688899888765443222111 112
Q ss_pred EEECCCCCEEEEEECC-----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEE
Q psy6127 354 AAYDPEGLAFAIGVNS-----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFD 423 (515)
Q Consensus 354 ~~~s~~~~~l~~g~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd 423 (515)
++. -+++.++.|+.+ ..+.+||..+......... + .....-..+.+ +++.++.|+.+ ..+.+||
T Consensus 117 ~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd 190 (308)
T 1zgk_A 117 VGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPM--L-TRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYY 190 (308)
T ss_dssp EEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCC--S-SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEE
T ss_pred EEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCC--C-ccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEe
Confidence 222 266777776543 3578888876432211111 1 11111222333 56666666643 4689999
Q ss_pred CCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeEEEEEcCCCC-CCeEEEEECCCCCE
Q psy6127 424 AFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYKVCVLDGDHP-SAVQSLQFNPKYHM 497 (515)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~ 497 (515)
+.+.+.... ........ -.+++.. ++++++.|+.+ ..+.+||+.+.+-...-..... .....+.+ ++++
T Consensus 191 ~~~~~W~~~-~~~p~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 265 (308)
T 1zgk_A 191 PERNEWRMI-TAMNTIRS-GAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRI 265 (308)
T ss_dssp TTTTEEEEC-CCCSSCCB-SCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEE
T ss_pred CCCCeEeeC-CCCCCccc-cceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEE
Confidence 887754332 11111111 1222222 67777777754 5699999988765432221111 11122222 5667
Q ss_pred EEEeeC-------CEEEEcCCC
Q psy6127 498 LASACS-------NMAFWIPTL 512 (515)
Q Consensus 498 las~~~-------dv~iW~~~~ 512 (515)
++.|+. ++.+||+..
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTT
T ss_pred EEEcCcCCCcccceEEEEcCCC
Confidence 776652 256666653
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=96.50 E-value=1.1 Score=47.57 Aligned_cols=269 Identities=11% Similarity=0.074 Sum_probs=149.7
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
...|.++.-.++| .|..|+.+| +..||..+.+...........|.++.. .+ ..+.+++ .+.+..+|..+++..
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~-g~lWigt---~~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QG-DTLWLGA---LNGLYTYQLQSRKLT 134 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ET-TEEEEEE---TTEEEEEETTTCCEE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cC-CcEEEEc---CCcceeEeCCCCeEE
Confidence 4579998877776 566677665 789998876543311112234666643 33 4566665 347888998776543
Q ss_pred EEe----cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-------CCeeEEEECCCCCEEEEEECC
Q psy6127 301 RYF----PGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-------GNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 301 ~~~----~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~s~~~~~l~~g~~d 369 (515)
... ......|.++....++...+ |+.+ -+..+|..+++... +... ..+.++..++++..|..|+.
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 321 11235688888887777554 4444 57788877665332 2111 12667777777776656664
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc----ccCCCCCEE
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV----LNNNASPLE 445 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~----~~~~~~i~~ 445 (515)
+-+..+|..+... ..... .....|.++...++|.+.+ |+.+ -+.+++..+++........ .-....|.+
T Consensus 211 ~Gl~~~~~~~~~~---~~~~~--l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 283 (758)
T 3ott_A 211 GYLFQYFPSTGQI---KQTEA--FHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWN 283 (758)
T ss_dssp EEEEEEETTTTEE---EEEEE--EEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEE
T ss_pred CCCeEEcCCCCeE---EeccC--CCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEE
Confidence 4577777654321 11111 1123577888888876554 5544 5888887665432211110 011234778
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEc----CCCCCCeEEEEECCCCCEEEEeeCCEEEEc
Q psy6127 446 ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD----GDHPSAVQSLQFNPKYHMLASACSNMAFWI 509 (515)
Q Consensus 446 ~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~----~~h~~~V~~l~~sp~~~~las~~~dv~iW~ 509 (515)
+....+|.+- .|+..| +.++............ ......|.++.-.++|.+-+...+-+..++
T Consensus 284 i~~D~~g~lW-iGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~Gl~~~~ 349 (758)
T 3ott_A 284 IFADQEHNIW-LGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANGLIRFT 349 (758)
T ss_dssp EEECTTCCEE-EEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTEEEEES
T ss_pred EEEcCCCCEE-EEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCcceeec
Confidence 8877777644 455566 5555432211111110 112346888888888776554433244443
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.076 Score=56.08 Aligned_cols=226 Identities=13% Similarity=0.070 Sum_probs=115.7
Q ss_pred CCeEEEEEee---CCCeEEEEECCCCeeeEEe-c------CCCCCeEEEEEcC-CCCEEEEEeCCC------cEEEEEcC
Q psy6127 275 KTTAIHASTK---VDATLRYLSLHDNKYVRYF-P------GHVRKVSSLNLSP-VDDSFISGSYDK------TVRVWDLR 337 (515)
Q Consensus 275 ~~~l~~~s~~---~d~~v~vwd~~~~~~~~~~-~------~h~~~v~~l~~~~-~~~~l~s~s~dg------~i~iwd~~ 337 (515)
++.+++.+|. .-..+.+||..+++-...- . .....-.+++..+ +++.++.|+.++ .+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 3445555442 2356888998877543322 1 1111122333333 677788887543 57889998
Q ss_pred CCCeEEEEecC--CCeeEEEECCCCCEEEEEECCC--cEEEEEeecCCCCCceeee-cCCCCCcCeEEEEEcCC-CCEEE
Q psy6127 338 QPNNVGMIQLS--GNKPIAAYDPEGLAFAIGVNSD--SIKLYDVRSYDKGPFASFK-CPGERGCEWTGLKFSPD-GKLIL 411 (515)
Q Consensus 338 ~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg--~i~i~d~~~~~~~~~~~~~-~~~~~~~~i~~l~~sp~-~~~l~ 411 (515)
+.+....-... ..-.+.+.-.++..++.|+.++ .+.+||..+.......... .+.. .....++.+..+ ++.++
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~-r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQN-SLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGS-CCBSCEEEEETTTTEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCc-ccceeEEEEeCCCCEEEE
Confidence 87554432221 1123344434888888887654 6888988764422111100 1111 111224556655 66666
Q ss_pred EEEC--C-----CcEEEEECCCCce-----eEEeecc-ccCCCCCEEEEEecCCCEEEEEeC--------CCcEEEEECC
Q psy6127 412 VSTN--G-----SIIRLFDAFNGNC-----VQSLSGV-LNNNASPLEATFTPDSQFVASGST--------DGQVHIWNAE 470 (515)
Q Consensus 412 ~~s~--d-----g~i~iwd~~~~~~-----~~~~~~~-~~~~~~i~~~~~sp~g~~l~sgs~--------dg~I~iwd~~ 470 (515)
.|+. + +.+..||+.+.+. -..+... ..... -.+++...++++++.|+. ...+.+||+.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRY-GSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCB-SCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcc-cceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 6664 2 4588999988762 1222211 11111 123344444777777774 3469999999
Q ss_pred CCeEEEEEcCCC-------CCCe-EEEEECCCCCEEEEeeC
Q psy6127 471 RGYKVCVLDGDH-------PSAV-QSLQFNPKYHMLASACS 503 (515)
Q Consensus 471 ~~~~~~~~~~~h-------~~~V-~~l~~sp~~~~las~~~ 503 (515)
+.+-.. ..... ...+ .+.+..+++++++.|++
T Consensus 635 t~~W~~-~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 635 SETLTS-IPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp TTEEEE-CCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred CCeEEE-eeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 886652 22100 0000 23444566677777764
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.41 Score=45.45 Aligned_cols=150 Identities=16% Similarity=0.103 Sum_probs=81.9
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-------cCCCeeEEEECCC---CCEEEEE-E--CC
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-------LSGNKPIAAYDPE---GLAFAIG-V--NS 369 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~s~~---~~~l~~g-~--~d 369 (515)
+...-...+.++|.|+|..+++--..|.|++++...++...... .......++++|+ +..|.+. + .+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 33344567899999999977766558999999876665432211 1234678999995 3444433 2 34
Q ss_pred CcEEEEEeecCC-----C-CCceeee-cCCCCCcCeEEEEEcCCCCEEEEEEC-------------CCcEEEEECCCCce
Q psy6127 370 DSIKLYDVRSYD-----K-GPFASFK-CPGERGCEWTGLKFSPDGKLILVSTN-------------GSIIRLFDAFNGNC 429 (515)
Q Consensus 370 g~i~i~d~~~~~-----~-~~~~~~~-~~~~~~~~i~~l~~sp~~~~l~~~s~-------------dg~i~iwd~~~~~~ 429 (515)
+.|.-|...... . .....+. ...........+.|.|||.+.++.+. .|.|.-.+.. ++.
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~i 185 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEP 185 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCc
Confidence 455555554321 0 1111111 11111223347999999976665432 2444444443 220
Q ss_pred --------eEEe-eccccCCCCCEEEEEecCCCEEEE
Q psy6127 430 --------VQSL-SGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 430 --------~~~~-~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
...+ .++.+ ...++|+|+|.+.++
T Consensus 186 p~~nPf~~~~i~a~G~RN----p~Gla~dp~G~L~~~ 218 (347)
T 3das_A 186 APGNPFPGSPVYSYGHRN----VQGLAWDDKQRLFAS 218 (347)
T ss_dssp CTTCSSTTCCEEEBCCSB----CCEEEECTTCCEEEE
T ss_pred cCCCCCCCCeEEeeCCCC----cceEEECCCCCEEEE
Confidence 0111 12222 578999998876554
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.11 Score=45.48 Aligned_cols=153 Identities=14% Similarity=0.048 Sum_probs=84.9
Q ss_pred CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceee-ecC-CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy6127 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASF-KCP-GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG 427 (515)
Q Consensus 350 ~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-~~~-~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~ 427 (515)
....++|+|+|.+.++ .+|.+.-.+..+......... ... ...-.....+.|.|+|.+.++ .||.|+-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5779999999997777 677766555433221111000 000 001111358999999987777 5588887775332
Q ss_pred ceeE-----EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCe------EEEEEcCCCCCCeEEEEECCCCC
Q psy6127 428 NCVQ-----SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGY------KVCVLDGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 428 ~~~~-----~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~------~~~~~~~~h~~~V~~l~~sp~~~ 496 (515)
..-. +..+... -..+..+.|.|+|.+.++. |+.++-+...++. ....+-...-..-+-+.|.|++.
T Consensus 118 ~~~~Wl~~a~~vg~~g-w~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 118 DTDNWIARATEVGSGG-WSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp TTCCHHHHSEEEECSS-GGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCceeccccEeccCC-CCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 1110 1100000 0126899999999877766 7775544333221 01111101223445677999998
Q ss_pred EEEEeeCCEEEEcCC
Q psy6127 497 MLASACSNMAFWIPT 511 (515)
Q Consensus 497 ~las~~~dv~iW~~~ 511 (515)
+.+.. +.++|...
T Consensus 195 l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 195 LFGVQ--GGKFYEDY 207 (236)
T ss_dssp EEEEE--TTEEEEES
T ss_pred EEEEe--CCeEEecC
Confidence 88877 55666554
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.22 Score=46.57 Aligned_cols=220 Identities=10% Similarity=0.066 Sum_probs=107.7
Q ss_pred EEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC-----C------CeEEEEECCCCeeeeE--ecCCCCcee
Q psy6127 201 TKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD-----D------DQIIIYDCEQGTSKNT--INSKKYGVD 267 (515)
Q Consensus 201 i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~-----d------g~i~iwd~~~~~~~~~--~~~~~~~v~ 267 (515)
+..+|.....|.. ..+..........+...+++.++.|+. . ..+..||..+++-... +........
T Consensus 15 ~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 15 AVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred eEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 4444433444543 333322222233333457788888873 1 1377889887654221 111111111
Q ss_pred EEEEecCCCeEEEEEeeC-------CCeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeC-C-----CcEE
Q psy6127 268 LIKFTHSKTTAIHASTKV-------DATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSY-D-----KTVR 332 (515)
Q Consensus 268 ~~~~~~~~~~l~~~s~~~-------d~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~-d-----g~i~ 332 (515)
.+.+ +..+++.+|.. ...+.+||..+++-... +......-..+. .+++.++.|+. + ..+.
T Consensus 94 ~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~ 168 (315)
T 4asc_A 94 LGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMC 168 (315)
T ss_dssp EEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEE
T ss_pred EEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEE
Confidence 1222 44565555421 25689999988754322 211111112222 34667777776 2 4689
Q ss_pred EEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEEEECCC-----cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC
Q psy6127 333 VWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAIGVNSD-----SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP 405 (515)
Q Consensus 333 iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~g~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp 405 (515)
+||..+.+....-....+ ...++ .-+++.++.|+.++ .+.+||..+..... .............+.+
T Consensus 169 ~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r~~~~~~~~-- 242 (315)
T 4asc_A 169 VYDPKKFEWKELAPMQTARSLFGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP---FEAFPQERSSLSLVSL-- 242 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTEEEE---ECCCSSCCBSCEEEEE--
T ss_pred EEeCCCCeEEECCCCCCchhceEEE-EECCEEEEEeccCCCCccceEEEEECCCCeEEE---CCCCCCcccceeEEEE--
Confidence 999988765443222211 11222 22667778877654 47788877643221 1111111111222333
Q ss_pred CCCEEEEEECC--------------CcEEEEECCCCceeEE
Q psy6127 406 DGKLILVSTNG--------------SIIRLFDAFNGNCVQS 432 (515)
Q Consensus 406 ~~~~l~~~s~d--------------g~i~iwd~~~~~~~~~ 432 (515)
+++.++.|+.+ ..+.+||+.+.+-...
T Consensus 243 ~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 243 VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 55666677653 2367888877654433
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.28 Score=48.74 Aligned_cols=108 Identities=13% Similarity=0.137 Sum_probs=61.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec---------CCCeeEEEECCC---CCEEEEEEC------
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL---------SGNKPIAAYDPE---GLAFAIGVN------ 368 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~~s~~---~~~l~~g~~------ 368 (515)
-...+.++|.|+|+++++-...+.|++++..+++....... ......++|+|+ +..|.+...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34578999999999777654445788888765654332222 233458999995 555554432
Q ss_pred -------CCcEEEEEeecCCCCC---ceeee-cCCCCCcCeEEEEEcCCCCEEEEEE
Q psy6127 369 -------SDSIKLYDVRSYDKGP---FASFK-CPGERGCEWTGLKFSPDGKLILVST 414 (515)
Q Consensus 369 -------dg~i~i~d~~~~~~~~---~~~~~-~~~~~~~~i~~l~~sp~~~~l~~~s 414 (515)
...|.-|+........ ...+. ...........++|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 1345555554321100 01111 1222223467999999998666544
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.12 Score=49.44 Aligned_cols=93 Identities=14% Similarity=0.214 Sum_probs=49.0
Q ss_pred CCeEEEEEeeCCCeEEEEECCC--Cee--eEEec-CCCCCeEEEEEcCCCCEEEEEeC-C---------CcEEEEEcCCC
Q psy6127 275 KTTAIHASTKVDATLRYLSLHD--NKY--VRYFP-GHVRKVSSLNLSPVDDSFISGSY-D---------KTVRVWDLRQP 339 (515)
Q Consensus 275 ~~~l~~~s~~~d~~v~vwd~~~--~~~--~~~~~-~h~~~v~~l~~~~~~~~l~s~s~-d---------g~i~iwd~~~~ 339 (515)
+..+++.+|.....+.++|..+ .+- +..+. .....-..+.+ +++.++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4556666655566889999864 222 12222 11111222222 4666777765 2 46889999887
Q ss_pred CeEEEEecC-CC-eeEEEECCCCCEEEEEECC
Q psy6127 340 NNVGMIQLS-GN-KPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 340 ~~~~~~~~~-~~-~~~~~~s~~~~~l~~g~~d 369 (515)
+....-... .. ....+...+++.++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 654433222 11 1122222577788888754
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.62 E-value=1.4 Score=40.94 Aligned_cols=193 Identities=10% Similarity=0.085 Sum_probs=96.2
Q ss_pred EcCCCCEEEEEeC----CC-------eEEEEECCCCeeeeE--ecCCCCceeEEEEecCCCeEEEEEeeCC------CeE
Q psy6127 229 YSSDGSLLISCSD----DD-------QIIIYDCEQGTSKNT--INSKKYGVDLIKFTHSKTTAIHASTKVD------ATL 289 (515)
Q Consensus 229 ~spd~~~lasgs~----dg-------~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~~~d------~~v 289 (515)
...++..++.|+. ++ .+..||..+++-... +.........+.+ +..+++.+|... ..+
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE---CCEEEEEcCccCCCCcccceE
Confidence 3457778888873 12 277888877654322 2211111222222 345666554321 358
Q ss_pred EEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCCC--eeEEEECCC
Q psy6127 290 RYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSGN--KPIAAYDPE 359 (515)
Q Consensus 290 ~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~ 359 (515)
.+||..+.+-... +......-..+. .+++.++.|+. -..+.+||+.+.+....-....+ ...++. -+
T Consensus 130 ~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 206 (318)
T 2woz_A 130 LCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HK 206 (318)
T ss_dssp EEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ET
T ss_pred EEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-EC
Confidence 8899887764432 111111111222 35666677664 23589999988765544322211 112222 26
Q ss_pred CCEEEEEECC-----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC--------------CcEE
Q psy6127 360 GLAFAIGVNS-----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG--------------SIIR 420 (515)
Q Consensus 360 ~~~l~~g~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d--------------g~i~ 420 (515)
++.++.|+.+ ..+.+||..+......... + ........+.+ +++.++.|+.+ ..+.
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p-~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~ 281 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF--P-QERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIW 281 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC--S-SCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCCEE
T ss_pred CEEEEEcCcCCCCccceEEEEECCCCeEEECCCC--C-CcccceEEEEE--CCEEEEECCeeccCCCCceeccceeeeEE
Confidence 6777777643 3467788776442211111 1 11111122222 55666666543 3577
Q ss_pred EEECCCCceeEE
Q psy6127 421 LFDAFNGNCVQS 432 (515)
Q Consensus 421 iwd~~~~~~~~~ 432 (515)
+||+.+.+-...
T Consensus 282 ~yd~~~~~W~~~ 293 (318)
T 2woz_A 282 KYEDDKKEWAGM 293 (318)
T ss_dssp EEETTTTEEEEE
T ss_pred EEeCCCCEehhh
Confidence 888877665443
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=95.25 E-value=0.94 Score=47.69 Aligned_cols=199 Identities=9% Similarity=0.067 Sum_probs=104.5
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCCeeeeEe-c-----CCCC-ceeEEEEecCCCeEEEEEeeCC-----CeEEEEEC
Q psy6127 231 SDGSLLISCSDD----DQIIIYDCEQGTSKNTI-N-----SKKY-GVDLIKFTHSKTTAIHASTKVD-----ATLRYLSL 294 (515)
Q Consensus 231 pd~~~lasgs~d----g~i~iwd~~~~~~~~~~-~-----~~~~-~v~~~~~~~~~~~l~~~s~~~d-----~~v~vwd~ 294 (515)
.++..++.|+.+ ..+.+||..+++-...- . .... .-.+++..+.+..+++.+|... ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 466777777753 46888998876543322 1 1111 1122333321344555554222 46889999
Q ss_pred CCCeeeEEecCCC-CCeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCCeEEEEe---c--C-CCeeEEEECCC-CCEEE
Q psy6127 295 HDNKYVRYFPGHV-RKVSSLNLSPVDDSFISGSYDK--TVRVWDLRQPNNVGMIQ---L--S-GNKPIAAYDPE-GLAFA 364 (515)
Q Consensus 295 ~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~---~--~-~~~~~~~~s~~-~~~l~ 364 (515)
.+.+-...-.... ..-.+++...+++.++.|+.++ .+.+||..+.+....-. . . .....+.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 8865433211111 1112233324688888888655 68999998876544322 1 1 11223555555 66777
Q ss_pred EEEC--C-----CcEEEEEeecCCCCC---ceeeec-CCCCCcCeEEEEEcCCCCEEEEEEC--------CCcEEEEECC
Q psy6127 365 IGVN--S-----DSIKLYDVRSYDKGP---FASFKC-PGERGCEWTGLKFSPDGKLILVSTN--------GSIIRLFDAF 425 (515)
Q Consensus 365 ~g~~--d-----g~i~i~d~~~~~~~~---~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~--------dg~i~iwd~~ 425 (515)
.|+. + ..+.+||+.+..... ...... +....... +++...+++.++.|+. ...+.+||..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 7765 2 458899988765200 111111 10111111 2333333667777763 3469999998
Q ss_pred CCcee
Q psy6127 426 NGNCV 430 (515)
Q Consensus 426 ~~~~~ 430 (515)
+.+..
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 87654
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.22 Score=43.56 Aligned_cols=103 Identities=18% Similarity=0.063 Sum_probs=63.3
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcee-----EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCV-----QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
.+..++|+|+|...++ .+|.++-.+..+.... .+..+...... ...+.|.|+|.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5669999999986666 6676666665442211 11111111111 468999999988877 569998887644
Q ss_pred CeE-------EEEEcCCCCCCeEEEEECCCCCEEEEeeCCE
Q psy6127 472 GYK-------VCVLDGDHPSAVQSLQFNPKYHMLASACSNM 505 (515)
Q Consensus 472 ~~~-------~~~~~~~h~~~V~~l~~sp~~~~las~~~dv 505 (515)
... ...-.. --..+..|.|.|+|.+-+..++.+
T Consensus 117 ~~~~~Wl~~a~~vg~~-gw~~~~~lff~p~G~Lyav~dg~l 156 (236)
T 1tl2_A 117 SDTDNWIARATEVGSG-GWSGFKFLFFHPNGYLYAVHGQQF 156 (236)
T ss_dssp STTCCHHHHSEEEECS-SGGGEEEEEECTTSCEEEEETTEE
T ss_pred CCCCceeccccEeccC-CCCceEEEEECCCceEEEEeCCcE
Confidence 211 011111 124689999999999888884443
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.038 Score=52.36 Aligned_cols=186 Identities=8% Similarity=-0.012 Sum_probs=97.3
Q ss_pred eCCCeEEEEECCCCeeeEEecCC-CCCeEEEEE--cCCCCEEEEE--eCCCcEEEEEcCCCCeEEEEecCCCeeE--EEE
Q psy6127 284 KVDATLRYLSLHDNKYVRYFPGH-VRKVSSLNL--SPVDDSFISG--SYDKTVRVWDLRQPNNVGMIQLSGNKPI--AAY 356 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~~h-~~~v~~l~~--~~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~ 356 (515)
+.||.|.-+|.++|+...+++.. ..++....- .+.+..++.+ +.||.+..+|..+|.....+....-+.. +..
T Consensus 17 t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~ 96 (339)
T 2be1_A 17 DVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHL 96 (339)
T ss_dssp ETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceecccccc
Confidence 37999999999999999888653 122222110 0112234433 5899999999988865544432211100 111
Q ss_pred -------CC----CCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCC-CcC-----eEEEE---Ec--CCCCEEEEEE
Q psy6127 357 -------DP----EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGER-GCE-----WTGLK---FS--PDGKLILVST 414 (515)
Q Consensus 357 -------s~----~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~-----i~~l~---~s--p~~~~l~~~s 414 (515)
.+ .+..+++|+.+|.+...|+++++.. ....... ... ..+.. +. ..+..++.+.
T Consensus 97 ~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~----W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~ 172 (339)
T 2be1_A 97 KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII----SAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGK 172 (339)
T ss_dssp ECC----------CCEEEEECEEEEEEEEEETTTCCEE----EEESTTCBCC--------------------CCEEEEEE
T ss_pred CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE----EEEecCCCcccccccccccccccccccccCCCeEEEec
Confidence 11 4567889999999999999987621 1111111 000 00111 10 1235677777
Q ss_pred CCCcEEEEECCCCceeEEee--ccccCCCC--C-EEEEEecCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy6127 415 NGSIIRLFDAFNGNCVQSLS--GVLNNNAS--P-LEATFTPDSQFVASGSTDGQVHIWNAERGYKVC 476 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~--~~~~~~~~--i-~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~ 476 (515)
.+..+.+.+ ++|+ ...+. ........ + ..-..+.|+.+ +.++.||.|.-+|..+|+.+.
T Consensus 173 ~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 173 TIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 666666666 4443 21111 00000000 0 00001224555 446788888888888888765
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=94.87 E-value=3.4 Score=40.93 Aligned_cols=107 Identities=13% Similarity=0.039 Sum_probs=62.2
Q ss_pred CcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCe---eeeEec---------CCCCceeEEEEecC---CCeEEEEEee-
Q psy6127 222 DKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGT---SKNTIN---------SKKYGVDLIKFTHS---KTTAIHASTK- 284 (515)
Q Consensus 222 ~~I~~l~~spd~~-~lasgs~dg~i~iwd~~~~~---~~~~~~---------~~~~~v~~~~~~~~---~~~l~~~s~~- 284 (515)
..-+.|+|.|||+ .|+.+...|.|++++..... .+..+. ........++|+|+ ...++++...
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4568999999996 45556788999999754221 222221 11456788999996 3344444321
Q ss_pred CC----------CeEEEEECCC----------CeeeEEec--CCCCCeEEEEEcCCCCEEEEEeCC
Q psy6127 285 VD----------ATLRYLSLHD----------NKYVRYFP--GHVRKVSSLNLSPVDDSFISGSYD 328 (515)
Q Consensus 285 ~d----------~~v~vwd~~~----------~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~s~d 328 (515)
.+ ..|.-|.+.. .+.+..+. ........|+|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 1444455532 12222221 222346889999999877766543
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=93.61 E-value=0.44 Score=47.67 Aligned_cols=126 Identities=14% Similarity=0.070 Sum_probs=80.3
Q ss_pred cEEEEEcCC----C-CeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCC-------CCceeeecCCCCCc
Q psy6127 330 TVRVWDLRQ----P-NNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDK-------GPFASFKCPGERGC 396 (515)
Q Consensus 330 ~i~iwd~~~----~-~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~-------~~~~~~~~~~~~~~ 396 (515)
.|.+.|.+. + .....++.......+.++|||+++++++ .+.++.++|++.... .+.........-..
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 477888776 3 3445556667788899999999988876 578999999985210 11111111122334
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCC----------ceeEEeeccccCCCCCEEEEE------ecCCCEEEEEe
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNG----------NCVQSLSGVLNNNASPLEATF------TPDSQFVASGS 459 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~----------~~~~~~~~~~~~~~~i~~~~~------sp~g~~l~sgs 459 (515)
.....+|.++|.-..+-.-|..|.-|++... ..+..+..|.. +-.+.- .|||++|++..
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq----pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ----PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC----EEEEEETTTTSTTCCSCEEEEEE
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccC----CcccccCCCccCCCCccEEEEec
Confidence 4568999999954445558999999998643 23444443332 222322 47899999875
|
| >3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A* | Back alignment and structure |
|---|
Probab=92.60 E-value=7.4 Score=37.19 Aligned_cols=190 Identities=7% Similarity=-0.028 Sum_probs=107.8
Q ss_pred eEEEEECCCC--eeeeEecCC------CCceeEEEEe---cC---CCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCC
Q psy6127 244 QIIIYDCEQG--TSKNTINSK------KYGVDLIKFT---HS---KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRK 309 (515)
Q Consensus 244 ~i~iwd~~~~--~~~~~~~~~------~~~v~~~~~~---~~---~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~ 309 (515)
.|.+||+.++ +.++++.-. ......+++. |. +...+..+-...+.+.|+|+.+++..+.+. ..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~--~~- 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH--PT- 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC--GG-
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc--CC-
Confidence 6888999998 888776543 3457778877 22 245555554567899999999999887663 21
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCC----CCEEEEEECCCcEEEEEeec--CCCC
Q psy6127 310 VSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE----GLAFAIGVNSDSIKLYDVRS--YDKG 383 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~----~~~l~~g~~dg~i~i~d~~~--~~~~ 383 (515)
|.|+.....+ -+|.-. .....+..++++|+ ++.|....-.+. ++|.+.+ .+..
T Consensus 201 -----~~pd~~~~~~--i~G~~~-------------~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~ 259 (381)
T 3q6k_A 201 -----FKAERPTKFD--YGGKEY-------------EFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQK 259 (381)
T ss_dssp -----GSCCSCEEEE--ETTEEE-------------EECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSST
T ss_pred -----CccccCcceE--ECCEEe-------------EeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCc
Confidence 3444111111 122211 12344888999998 788887765542 4444432 1110
Q ss_pred -CceeeecC--CCCCcCeEEEEEc-CCCCEEEEEECCCcEEEEECCC-C---ceeEEeeccccCCCCCEEEEEecCCCEE
Q psy6127 384 -PFASFKCP--GERGCEWTGLKFS-PDGKLILVSTNGSIIRLFDAFN-G---NCVQSLSGVLNNNASPLEATFTPDSQFV 455 (515)
Q Consensus 384 -~~~~~~~~--~~~~~~i~~l~~s-p~~~~l~~~s~dg~i~iwd~~~-~---~~~~~~~~~~~~~~~i~~~~~sp~g~~l 455 (515)
....++.. .+....-..++++ .+|..+++--..+.|..|+..+ . .....+.... .-..+..+.+.++|.+.
T Consensus 260 ~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lw 338 (381)
T 3q6k_A 260 GGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLW 338 (381)
T ss_dssp TCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEE
T ss_pred chhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEE
Confidence 01111111 1112333456776 5776666666788999999875 1 1223332222 33345667776666655
Q ss_pred EEE
Q psy6127 456 ASG 458 (515)
Q Consensus 456 ~sg 458 (515)
+..
T Consensus 339 v~s 341 (381)
T 3q6k_A 339 FMS 341 (381)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=90.75 E-value=9.6 Score=34.74 Aligned_cols=247 Identities=9% Similarity=0.017 Sum_probs=121.0
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE
Q psy6127 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~ 302 (515)
.|..++....- .++. . ||.|..|-......+..-......|..++.... +.++. . ||.|+.|-......+..
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~--hs~~l--~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY--HSLAL--K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS--EEEEE--E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC--EEEEE--E-CCEEEEeeCCCCCCCCC
Confidence 56666655432 3333 4 899999976542221111111235666665433 23333 3 89999997654322111
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE-EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCC
Q psy6127 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG-MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381 (515)
Q Consensus 303 ~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~ 381 (515)
-..-...|..++...+ ..+.-. ||.|..|-......+. .......+..++.- ....+.-. +|.+..|-.....
T Consensus 97 P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G--~~~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG--VYTALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SSEEEEEE-TTEEEEEECCTTS
T ss_pred CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcc--cCEEEEEE-CCEEEEecCCCCC
Confidence 1111246777777643 333344 8999999765422111 11112224334332 22333333 7888888765532
Q ss_pred CCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC
Q psy6127 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD 461 (515)
Q Consensus 382 ~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d 461 (515)
... .+......|..++...+. .++. .||.++.|-......+-... .....|..++..... .++. . |
T Consensus 171 qlg-----~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~---~~~~~v~~i~~G~~h-~~al-~-~ 236 (282)
T 3qhy_B 171 QTT-----VPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPT---EALSGVSAIASGEWY-SLAL-K-N 236 (282)
T ss_dssp TTS-----CCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCG---GGGSSCCEEEECSSC-EEEE-E-T
T ss_pred CCC-----CceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCc---ccCCCceEEEcCCCE-EEEE-E-C
Confidence 211 111112456677665443 2333 58999999754322111100 111236666654332 3333 3 8
Q ss_pred CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee
Q psy6127 462 GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 462 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
|.|+.|=.....++. -...|.+++-.+...+.++.+
T Consensus 237 g~v~~wG~n~~gq~~-----v~~~v~~iaaG~~h~~al~~~ 272 (282)
T 3qhy_B 237 GKVIAWGSSRTAPSS-----VQSGVSSIEAGPNAAYALKGG 272 (282)
T ss_dssp TEEEEESTTCCCCGG-----GSSCEEEEEECSSCEEEEEC-
T ss_pred CEEEEecCCCCcccc-----CCCCcEEEEECcCeEEEEecC
Confidence 999999655432221 223577777666555444443
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=88.16 E-value=21 Score=35.13 Aligned_cols=242 Identities=10% Similarity=0.039 Sum_probs=121.0
Q ss_pred CceeEEEEecCCC-eEEEEEeeCCCeEEEEECCCCe---eeEEec---------CCCCCeEEEEEcCC----CCEEEEEe
Q psy6127 264 YGVDLIKFTHSKT-TAIHASTKVDATLRYLSLHDNK---YVRYFP---------GHVRKVSSLNLSPV----DDSFISGS 326 (515)
Q Consensus 264 ~~v~~~~~~~~~~-~l~~~s~~~d~~v~vwd~~~~~---~~~~~~---------~h~~~v~~l~~~~~----~~~l~s~s 326 (515)
...+.|+|.|++. .++++. ..|.|++++..... .+..+. ........|+|+|+ +.+.++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~e--r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILE--KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEE--TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEe--CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 4567899999996 565554 68999999754321 222221 11456889999996 33333322
Q ss_pred C--C----------CcEEEEEcCCC----------CeEEEEe---cCCCeeEEEECCCCCEEEEEECCCc----------
Q psy6127 327 Y--D----------KTVRVWDLRQP----------NNVGMIQ---LSGNKPIAAYDPEGLAFAIGVNSDS---------- 371 (515)
Q Consensus 327 ~--d----------g~i~iwd~~~~----------~~~~~~~---~~~~~~~~~~s~~~~~l~~g~~dg~---------- 371 (515)
. + ..|.-|.+..+ +.+..+. ..+....+.|.|||.+.++.+..+.
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~ 171 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDG 171 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTT
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccC
Confidence 2 1 13444655421 2222222 1234677999999988777654331
Q ss_pred -----EEEEEeecCCCC-----------Cce------eeecCCCCCcCeEEEEEcCC-----CC-EEEEEECCC----cE
Q psy6127 372 -----IKLYDVRSYDKG-----------PFA------SFKCPGERGCEWTGLKFSPD-----GK-LILVSTNGS----II 419 (515)
Q Consensus 372 -----i~i~d~~~~~~~-----------~~~------~~~~~~~~~~~i~~l~~sp~-----~~-~l~~~s~dg----~i 419 (515)
=+|+.+...... +.. ......++..+ ..++|+|. |+ +++.+...| .-
T Consensus 172 ~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp-~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ 250 (463)
T 2wg3_C 172 LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDP-GRCAVDRHPTDININLTILCSDSNGKNRSSA 250 (463)
T ss_dssp CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSC-CBEEEESSCSSTTCSEEEEEECC------CE
T ss_pred cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCc-ceEEECCCCCCcccceEEEecccCCCCCCCC
Confidence 134433322110 000 00001122222 37999996 34 444433212 12
Q ss_pred EEEECCCCc------eeEEeeccccCCCCCEEEEEecC-------CCEEEEEeCCCcEEEEECCCCe---EEEEEc----
Q psy6127 420 RLFDAFNGN------CVQSLSGVLNNNASPLEATFTPD-------SQFVASGSTDGQVHIWNAERGY---KVCVLD---- 479 (515)
Q Consensus 420 ~iwd~~~~~------~~~~~~~~~~~~~~i~~~~~sp~-------g~~l~sgs~dg~I~iwd~~~~~---~~~~~~---- 479 (515)
.|..+..+. ++..+..+ ....+..+.|-.. |.+++ +...+.|....++.+. ....+.
T Consensus 251 ei~~i~~G~~yG~~~P~~~~~~~--~g~Ap~G~~~Y~G~~fP~~~g~~f~-~~~~g~i~~~~~~~~~~~~~~~~~~~g~~ 327 (463)
T 2wg3_C 251 RILQIIKGKDYESEPSLLEFKPF--SNGPLVGGFVYRGCQSERLYGSYVF-GDRNGNFLTLQQSPVTKQWQEKPLCLGTS 327 (463)
T ss_dssp EEEEEC----CCSCCCCEECCC------CEEEEEECCCSSCTTTTTCEEE-EETTSCEEEEEC-----CCEEEEECEEET
T ss_pred eEeeeccCCCCCCCCCeEEeeCC--CCccccceEEEeCCCChhhcceEEE-ecCCCcEEEEEeCCCCceeeEEEeecCCc
Confidence 333333222 22222211 0123667777432 33444 4445766666554331 111221
Q ss_pred ----CCCCCCeEEEEECCCCCEEEEee-------CCEEEEcCC
Q psy6127 480 ----GDHPSAVQSLQFNPKYHMLASAC-------SNMAFWIPT 511 (515)
Q Consensus 480 ----~~h~~~V~~l~~sp~~~~las~~-------~dv~iW~~~ 511 (515)
......+.++...|||.+.++.+ .+.+||.+.
T Consensus 328 ~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 328 GSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp TSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred ccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEec
Confidence 11235789999999999888876 468999875
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=86.43 E-value=14 Score=33.52 Aligned_cols=219 Identities=13% Similarity=0.051 Sum_probs=105.5
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM 344 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 344 (515)
.|..++.... +.++. . ||.|+.|-......+..-......|..++..... .++. . ||.|..|-......+..
T Consensus 25 ~i~~ia~G~~--h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSS--EEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCC--eEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCC
Confidence 4666655432 33333 3 8999999765432221111123356677765432 2333 4 89999997553211110
Q ss_pred -EecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 345 -IQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 345 -~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
......+..++.. ....+.-. +|.+..|-........ .+......|..++...+. .+.-. ||.++.|-
T Consensus 97 P~~~~~~v~~ia~G--~~hs~al~-~G~v~~wG~n~~gqlg-----~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG 165 (282)
T 3qhy_B 97 PAEARSGVDAIAAG--AWASYALK-DGKVIAWGDDSDGQTT-----VPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWG 165 (282)
T ss_dssp CGGGSSSEEEEEEE--TTEEEEEE-TTEEEEEECCTTSTTS-----CCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEE
T ss_pred CcccCCCeEEEECc--CCEEEEEe-CCeEEEecCCCCCcCC-----CCccCCCCeEEEEcccCE--EEEEE-CCEEEEec
Confidence 0112234434333 33444445 8899888766533211 111122356666664432 23334 78999997
Q ss_pred CCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 424 AFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
......+.. +.. ....|..++... .+.+.- .||.|+.|=....-.+. ++......|..++-.....+.++ ++
T Consensus 166 ~n~~gqlg~-p~~--~~~~v~~i~~G~--~hs~al-~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~h~~al~-~g 237 (282)
T 3qhy_B 166 DNYFGQTTV-PAE--AQSGVDDVAGGI--FHSLAL-KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGEWYSLALK-NG 237 (282)
T ss_dssp CCTTSTTSC-CGG--GGSSEEEEEECS--SEEEEE-ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECSSCEEEEE-TT
T ss_pred CCCCCCCCC-cee--cCCCeEEEEecC--CEEEEE-ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCCCEEEEEE-CC
Confidence 654221111 100 112255555443 233333 58999999654321111 01012235667776666555555 55
Q ss_pred CEEEEcC
Q psy6127 504 NMAFWIP 510 (515)
Q Consensus 504 dv~iW~~ 510 (515)
.+..|-.
T Consensus 238 ~v~~wG~ 244 (282)
T 3qhy_B 238 KVIAWGS 244 (282)
T ss_dssp EEEEEST
T ss_pred EEEEecC
Confidence 5666643
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=86.03 E-value=24 Score=33.60 Aligned_cols=260 Identities=13% Similarity=0.063 Sum_probs=119.4
Q ss_pred CCcEEEEEEcC--CCCEEEEEeCCC----eEEEEECCCCeeeeEecC--------------CCCceeEEEEecC--CCeE
Q psy6127 221 TDKINSLDYSS--DGSLLISCSDDD----QIIIYDCEQGTSKNTINS--------------KKYGVDLIKFTHS--KTTA 278 (515)
Q Consensus 221 ~~~I~~l~~sp--d~~~lasgs~dg----~i~iwd~~~~~~~~~~~~--------------~~~~v~~~~~~~~--~~~l 278 (515)
...|.+|++.| ++.+.+ +...| .|...+ ..++.-..+.. ....|.++++.|. ...+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLM-AARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CCceEEEEECCCCCCeEEE-EecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 35799999998 454444 44444 333322 22322222211 1124777888873 4555
Q ss_pred EEEEeeCCCeEEEEECCCCeeeEEec-------------------CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCC
Q psy6127 279 IHASTKVDATLRYLSLHDNKYVRYFP-------------------GHVRKVSSLNLSPV-DDSFISGSYDKTVRVWDLRQ 338 (515)
Q Consensus 279 ~~~s~~~d~~v~vwd~~~~~~~~~~~-------------------~h~~~v~~l~~~~~-~~~l~s~s~dg~i~iwd~~~ 338 (515)
++++ ..+.|...+- .++.-..+. .....+.+|.+.|. ...++.+..++.|...+ ..
T Consensus 132 ~~g~--~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-Dg 207 (394)
T 3b7f_A 132 YAGT--SPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DA 207 (394)
T ss_dssp EEEE--ETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-ST
T ss_pred EEEe--cCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CC
Confidence 5544 3555555432 222211111 01235789999884 34455555445444332 22
Q ss_pred CCeEEEEec--------------CCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCCCceeeec--CCCCCcCeEEE
Q psy6127 339 PNNVGMIQL--------------SGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKC--PGERGCEWTGL 401 (515)
Q Consensus 339 ~~~~~~~~~--------------~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~i~~l 401 (515)
++....+.. ...+..+.++|. ...+.++...+ |...+ ... .....+.. .......+..+
T Consensus 208 G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~--D~G-~tW~~~~~~l~~~~~~~~~~i 283 (394)
T 3b7f_A 208 GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD--RRE-GVWKRIGDAMPREVGDIGFPI 283 (394)
T ss_dssp TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE--TTT-TEEECGGGGSCTTTCSCEEEE
T ss_pred CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC--CCC-CcceECCCCCCCCCccceEEE
Confidence 333322211 113677888885 45666666544 33322 211 11111111 11111235678
Q ss_pred EEcC-CCCEEEEEEC-----------CCcEEEEECCC-CceeEEeec-cccCCC----CCEEEEEecC-CCEEEEEeCCC
Q psy6127 402 KFSP-DGKLILVSTN-----------GSIIRLFDAFN-GNCVQSLSG-VLNNNA----SPLEATFTPD-SQFVASGSTDG 462 (515)
Q Consensus 402 ~~sp-~~~~l~~~s~-----------dg~i~iwd~~~-~~~~~~~~~-~~~~~~----~i~~~~~sp~-g~~l~sgs~dg 462 (515)
.++| +...+.++.. ++...+|...+ |+.-..+.. ...... ....++++|. ...|+.++.++
T Consensus 284 ~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g 363 (394)
T 3b7f_A 284 VVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGG 363 (394)
T ss_dssp EECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTS
T ss_pred EECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCC
Confidence 8887 3344555432 23345555444 333333321 111100 1235788874 34566676666
Q ss_pred cEEEEECCCCeEEEEEcCCCCCCeEEEEEC
Q psy6127 463 QVHIWNAERGYKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 463 ~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 492 (515)
.|..-+ +.|+.-..+.. +-..+.+++|.
T Consensus 364 ~l~~S~-D~G~tW~~~~~-~lp~~~~v~~~ 391 (394)
T 3b7f_A 364 EIWASA-DEGEHWQCIAS-HLPHIYAVQSA 391 (394)
T ss_dssp CEEEES-STTSBCEEEEC-SCSCEEEEEEE
T ss_pred eEEEEC-CCCCCceEccc-CCCCeeEEEEe
Confidence 655432 33433333333 33457777764
|
| >3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A* | Back alignment and structure |
|---|
Probab=84.43 E-value=29 Score=33.09 Aligned_cols=186 Identities=8% Similarity=0.095 Sum_probs=104.1
Q ss_pred CeEEEEECCCC--eeeEEecC------CCCCeEEEEEc---CC----CCEEEEEe-CCCcEEEEEcCCCCeEEEEecCCC
Q psy6127 287 ATLRYLSLHDN--KYVRYFPG------HVRKVSSLNLS---PV----DDSFISGS-YDKTVRVWDLRQPNNVGMIQLSGN 350 (515)
Q Consensus 287 ~~v~vwd~~~~--~~~~~~~~------h~~~v~~l~~~---~~----~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~ 350 (515)
-.+.+||+.++ +.++++.- ..+.+..+.+. |+ +.+.+.+. ..+.|.++|+.+++..+..+..
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-- 200 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-- 200 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG--
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC--
Confidence 35667788777 77766532 23567888887 22 23444443 4678999999999888766321
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC----CCEEEEEECCCcEEEEECC-
Q psy6127 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD----GKLILVSTNGSIIRLFDAF- 425 (515)
Q Consensus 351 ~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~----~~~l~~~s~dg~i~iwd~~- 425 (515)
+.|+.....+ -+|.-.-| ...+..++++|+ +++|+.....+. ++|.+.
T Consensus 201 -----~~pd~~~~~~--i~G~~~~~-------------------~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T 253 (381)
T 3q6k_A 201 -----FKAERPTKFD--YGGKEYEF-------------------KAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNT 253 (381)
T ss_dssp -----GSCCSCEEEE--ETTEEEEE-------------------CCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEH
T ss_pred -----CccccCcceE--ECCEEeEe-------------------ccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEH
Confidence 3444111111 12221111 124678999998 788887765542 334332
Q ss_pred ----CCc---eeEEeeccccCCCCCEEEEEe-cCCCEEEEEeCCCcEEEEECCC-C----eEEEEEcCCCCCCeEEEEEC
Q psy6127 426 ----NGN---CVQSLSGVLNNNASPLEATFT-PDSQFVASGSTDGQVHIWNAER-G----YKVCVLDGDHPSAVQSLQFN 492 (515)
Q Consensus 426 ----~~~---~~~~~~~~~~~~~~i~~~~~s-p~g~~l~sgs~dg~I~iwd~~~-~----~~~~~~~~~h~~~V~~l~~s 492 (515)
+.. .++.+ +..+....-..+++. .+|.++++--..+.|..|+..+ . ..........-..+.++.+.
T Consensus 254 ~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~ 332 (381)
T 3q6k_A 254 KELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVD 332 (381)
T ss_dssp HHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEEC
T ss_pred HHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEEC
Confidence 221 12222 222211223456675 5676677667788999999875 1 11222222133467888888
Q ss_pred CCCCEEEEee
Q psy6127 493 PKYHMLASAC 502 (515)
Q Consensus 493 p~~~~las~~ 502 (515)
++|.+-+.++
T Consensus 333 ~~g~Lwv~sn 342 (381)
T 3q6k_A 333 SKGGLWFMSN 342 (381)
T ss_dssp TTSCEEEEEC
T ss_pred CCCeEEEEEC
Confidence 8887666554
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=81.55 E-value=55 Score=34.22 Aligned_cols=223 Identities=11% Similarity=0.027 Sum_probs=111.6
Q ss_pred EecCCCeEEEEE---eeCCCeEEEEECCCCeeeEE-ecCCCC--------CeEEEEEcCCCCEEEEEe----------CC
Q psy6127 271 FTHSKTTAIHAS---TKVDATLRYLSLHDNKYVRY-FPGHVR--------KVSSLNLSPVDDSFISGS----------YD 328 (515)
Q Consensus 271 ~~~~~~~l~~~s---~~~d~~v~vwd~~~~~~~~~-~~~h~~--------~v~~l~~~~~~~~l~s~s----------~d 328 (515)
++|+++++++.- |+.-..++++|+.+++.+.. +. ... ....++|..++..+++.. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 677777766553 22334799999999987631 22 111 113457774444444321 12
Q ss_pred CcEEEEEcCCCC--eEEEEecCC-C-eeEEEECCCCC-----EEEEEECC---CcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 329 KTVRVWDLRQPN--NVGMIQLSG-N-KPIAAYDPEGL-----AFAIGVNS---DSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 329 g~i~iwd~~~~~--~~~~~~~~~-~-~~~~~~s~~~~-----~l~~g~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
..|+.|.+-+.. -...+.... . ......+++++ .+++.+.+ ..+.+.+...... ....+ ......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~l--~~~~~~ 292 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL-KLQKI--NMPSDA 292 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC-EEEEC--CSCTTC
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC-cceEe--ecCCcc
Confidence 468888877653 223332222 1 22345566665 24443322 3445555432111 11122 112221
Q ss_pred CeEEEEEcCCCCEEEEE----------ECCCcEEEEECCCCc-------eeEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 397 EWTGLKFSPDGKLILVS----------TNGSIIRLFDAFNGN-------CVQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~----------s~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
.+..++++.+++.. ...+.|...|+.++. ....+..+. ....+..+.+..+ .++++..
T Consensus 293 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 293 ---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT-ANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp ---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC-TTEEEEEEEECSS-CEEEEEE
T ss_pred ---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC-CCCeEEEEEEECC-EEEEEEE
Confidence 22334455544422 246778888887642 122222222 2223667788765 5677777
Q ss_pred CCCc--EEEEECCCCe-EEEE-EcCCCCCCeEEEEECCCCC-EEEEee
Q psy6127 460 TDGQ--VHIWNAERGY-KVCV-LDGDHPSAVQSLQFNPKYH-MLASAC 502 (515)
Q Consensus 460 ~dg~--I~iwd~~~~~-~~~~-~~~~h~~~V~~l~~sp~~~-~las~~ 502 (515)
.++. +.++++.+++ .... +.-...+.+.....++++. ++++.+
T Consensus 368 ~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~s 415 (711)
T 4hvt_A 368 DNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIE 415 (711)
T ss_dssp ETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEE
T ss_pred ECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEe
Confidence 7764 6777776665 2233 3221235677777777665 444443
|
| >1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1 | Back alignment and structure |
|---|
Probab=81.14 E-value=35 Score=31.69 Aligned_cols=236 Identities=8% Similarity=0.003 Sum_probs=125.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCC----eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECC---------CC
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQG----TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH---------DN 297 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~---------~~ 297 (515)
|+..++++.+.+|.|+--....- .....++. .+.+..+......+.+++.+ ..|.++-+... .|
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT--~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFT--NKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEE--TTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEE--CCCEEEEEEHHHCcCCCCCCCC
Confidence 56778899999999987754311 11112222 24455555555666777776 58887666542 23
Q ss_pred eeeEE---ecCCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEcCCC------CeEEEE--ecCCCeeEEEECCCCCEE
Q psy6127 298 KYVRY---FPGHVRKVSSLNLSPV---DDSFISGSYDKTVRVWDLRQP------NNVGMI--QLSGNKPIAAYDPEGLAF 363 (515)
Q Consensus 298 ~~~~~---~~~h~~~v~~l~~~~~---~~~l~s~s~dg~i~iwd~~~~------~~~~~~--~~~~~~~~~~~s~~~~~l 363 (515)
.++.. +. ....|.++...++ +.+++.++.+|.++...+... .-+..+ ...+.+..+........+
T Consensus 80 ~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i 158 (323)
T 1wp5_A 80 QHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNEL 158 (323)
T ss_dssp EEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEE
T ss_pred cChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEE
Confidence 32222 22 2344655443332 568899999999999877421 222222 222334444444455678
Q ss_pred EEEECCCcEEEEEeecCCCCC--ceeeec-CCCCCcCeEEEEEcCCCC-EEEEEECCCcEEEEECCC-------CceeEE
Q psy6127 364 AIGVNSDSIKLYDVRSYDKGP--FASFKC-PGERGCEWTGLKFSPDGK-LILVSTNGSIIRLFDAFN-------GNCVQS 432 (515)
Q Consensus 364 ~~g~~dg~i~i~d~~~~~~~~--~~~~~~-~~~~~~~i~~l~~sp~~~-~l~~~s~dg~i~iwd~~~-------~~~~~~ 432 (515)
+..+.+|.+..++...-...- ..-... .-.....|.++..-+++. .+++.+..|..+..++.. ++-+..
T Consensus 159 ~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~ 238 (323)
T 1wp5_A 159 FLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVI 238 (323)
T ss_dssp EEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEEC
T ss_pred EEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEEC
Confidence 888899999888876422100 001111 112234455554444444 788888888888777643 111222
Q ss_pred eeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 433 ~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
+.........+..+....++..++..+.+|.+.-.++.
T Consensus 239 ~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 239 LRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp SCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred eeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 22111111124433333334455566677776655554
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=81.01 E-value=57 Score=34.08 Aligned_cols=242 Identities=10% Similarity=0.052 Sum_probs=126.1
Q ss_pred EEEEE-EcCCCCEEEEEeC-----CCeEEEEECCCCeeee-EecCCCC--------ceeEEEEecCCCeEEEEEe-----
Q psy6127 224 INSLD-YSSDGSLLISCSD-----DDQIIIYDCEQGTSKN-TINSKKY--------GVDLIKFTHSKTTAIHAST----- 283 (515)
Q Consensus 224 I~~l~-~spd~~~lasgs~-----dg~i~iwd~~~~~~~~-~~~~~~~--------~v~~~~~~~~~~~l~~~s~----- 283 (515)
...+. ++||+++++.+-. -..++++|+.+++.+. .+. ... ....++|. +++.+++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEE-CCCEEEEEeCCCCCC
Confidence 34455 8899988765422 2479999999988763 122 111 11345787 4445554321
Q ss_pred ----eCCCeEEEEECCCCe--eeEEecCCCCC-eEEEEEcCCCC-----EEEEEeCC---CcEEEEEcCCCC-eEEEEec
Q psy6127 284 ----KVDATLRYLSLHDNK--YVRYFPGHVRK-VSSLNLSPVDD-----SFISGSYD---KTVRVWDLRQPN-NVGMIQL 347 (515)
Q Consensus 284 ----~~d~~v~vwd~~~~~--~~~~~~~h~~~-v~~l~~~~~~~-----~l~s~s~d---g~i~iwd~~~~~-~~~~~~~ 347 (515)
.....|+.|.+-+.. -...+.+.... -.....+++++ .+++.+.+ ..+.+.|..... ....+..
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 288 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINM 288 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCS
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeec
Confidence 123568888876542 22334433333 33455666766 24544422 345666655321 2233333
Q ss_pred CCCeeEEEECCCCCEEEEE----------ECCCcEEEEEeecCCC-----CCceeeecCCCCCcCeEEEEEcCCCCEEEE
Q psy6127 348 SGNKPIAAYDPEGLAFAIG----------VNSDSIKLYDVRSYDK-----GPFASFKCPGERGCEWTGLKFSPDGKLILV 412 (515)
Q Consensus 348 ~~~~~~~~~s~~~~~l~~g----------~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~ 412 (515)
+... .+..++++.+++.. ...+.|...|+..... .....+. .......+..+.+.++ ..+++
T Consensus 289 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 289 PSDA-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF-TPTANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp CTTC-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE-CCCTTEEEEEEEECSS-CEEEE
T ss_pred CCcc-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE-CCCCCCeEEEEEEECC-EEEEE
Confidence 3222 22334455554422 2467788899876421 1112212 2334556778888876 46666
Q ss_pred EECCCc--EEEEECCCCc-eeEE-eeccccCCCCCEEEEEecCCC-EEEEEeC---CCcEEEEECCCCe
Q psy6127 413 STNGSI--IRLFDAFNGN-CVQS-LSGVLNNNASPLEATFTPDSQ-FVASGST---DGQVHIWNAERGY 473 (515)
Q Consensus 413 ~s~dg~--i~iwd~~~~~-~~~~-~~~~~~~~~~i~~~~~sp~g~-~l~sgs~---dg~I~iwd~~~~~ 473 (515)
...++. +.++++.+++ .... +... ....+.....++++. ++++.+. -+.+..+|+. ++
T Consensus 366 ~~~~~~~~l~~~~~~~g~~~~~~~i~lp--~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 366 TYDNVVAKVVTFTLENEQWTKPVVLKLP--YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE 431 (711)
T ss_dssp EEETTEEEEEEECEETTEECCCEEECCC--STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC
T ss_pred EEECCEEEEEEEECCCCceEEEeccCCC--CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc
Confidence 666664 6677766664 2233 2211 112355556667665 4444432 3678888876 44
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 515 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-28 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-14 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-14 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-25 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 9e-18 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-11 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 9e-21 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-19 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 8e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-04 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-17 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 5e-16 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 8e-08 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 9e-08 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 9e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-17 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 6e-14 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 5e-16 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 5e-07 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 9e-15 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-13 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-14 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 5e-07 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 6e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-12 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-09 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-09 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 5e-08 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-05 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 2e-12 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 2e-06 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 9e-06 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-12 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-04 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 2e-11 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 5e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 3e-11 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-07 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 7e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 6e-11 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 6e-11 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 5e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.003 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-11 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-10 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 9e-06 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 1e-09 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 6e-09 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-09 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-09 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-05 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 9e-09 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 7e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 5e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.002 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 8e-08 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 3e-07 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 3e-04 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 1e-06 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 0.003 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 4e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 8e-05 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 0.002 | |
| d1qnia2 | 441 | b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter | 0.003 | |
| d1qnia2 | 441 | b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter | 0.004 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 113 bits (283), Expect = 1e-28
Identities = 57/305 (18%), Positives = 113/305 (37%), Gaps = 22/305 (7%)
Query: 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275
+ + + + S+++S S+D I ++D E G + T+ V I F HS
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 276 TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
S + L + +R GH VSS+++ P D +S S DKT+++W+
Sbjct: 72 KLLASCSADMTIKLWD--FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 336 LRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD--------KGPFA 386
++ V + + +G A N +++++ V + + +
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 387 SFKCPGERGCEWTG-------LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN 439
E K G +L + I+++D G C+ +L G N
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 440 NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLA 499
F +F+ S + D + +W+ + + L+ H V SL F+ +
Sbjct: 250 VRG---VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVV 305
Query: 500 SACSN 504
+ +
Sbjct: 306 TGSVD 310
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 71.3 bits (173), Expect = 3e-14
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Query: 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHA 281
+ G L+S S D I ++D G T+ V + F +
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265
Query: 282 STKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
+ D TLR + + ++ H V+SL+ ++GS D+TV+VW+
Sbjct: 266 AD--DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 71.3 bits (173), Expect = 4e-14
Identities = 29/188 (15%), Positives = 69/188 (36%), Gaps = 19/188 (10%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
V++ K F + + + + + DG+L+ SCS+D + ++ K + ++ V+
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 268 LIKFTHSKTTAIHA------------------STKVDATLRYLSLHDNKYVRYFPGHVRK 309
I + + + + S D T++ + + GH
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 310 VSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIA-AYDPEGLAFAIGVN 368
V + +S + DKT+RVWD + + + + + + G
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 309
Query: 369 SDSIKLYD 376
++K+++
Sbjct: 310 DQTVKVWE 317
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 103 bits (256), Expect = 6e-25
Identities = 53/295 (17%), Positives = 99/295 (33%), Gaps = 9/295 (3%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKF 271
R + R + KI ++ + +D LL+S S D ++II+D + I + V +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 272 THSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329
S ++ L + R GH +S + S
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 330 TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK 389
+G+ + P+ F G S KL+DVR +F
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE--GMCRQTFT 223
Query: 390 CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449
+ + F P+G ++ + RLFD + + N +F+
Sbjct: 224 GHES---DINAICFFPNGNAFATGSDDATCRLFDLRADQELMT-YSHDNIICGITSVSFS 279
Query: 450 PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504
+ + +G D ++W+A + + VL G H + V L +A+ +
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWD 333
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 82.5 bits (202), Expect = 9e-18
Identities = 23/128 (17%), Positives = 49/128 (38%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
VR + F + IN++ + +G+ + SDD ++D T +
Sbjct: 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG 272
Query: 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY 327
+ + SK+ + + D GH +VS L ++ + +GS+
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW 332
Query: 328 DKTVRVWD 335
D +++W+
Sbjct: 333 DSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.8 bits (151), Expect = 3e-11
Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 1/154 (0%)
Query: 224 INSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST 283
+ SL + D L +S + D ++D +G + T + ++ I F + S
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG 343
L L + ++S++ S ++G D VWD + + G
Sbjct: 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG 306
Query: 344 MIQLSGNKPIA-AYDPEGLAFAIGVNSDSIKLYD 376
++ N+ +G+A A G +K+++
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.7 bits (148), Expect = 6e-11
Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 11/255 (4%)
Query: 256 KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315
+ K + + + T + +D + + R GH+ K+ +++
Sbjct: 8 RQEAEQLKNQIRDARKACADATLSQITNNID----PVGRIQMRTRRTLRGHLAKIYAMHW 63
Query: 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIA-AYDPEGLAFAIGVNSDSIKL 374
+S S D + +WD N V I L + + AY P G A G + +
Sbjct: 64 GTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123
Query: 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434
Y++++ + S + G G + + + + +
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT-- 181
Query: 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK 494
+ + + PD++ SG+ D +W+ G G H S + ++ F P
Sbjct: 182 ---GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICFFPN 237
Query: 495 YHMLASACSNMAFWI 509
+ A+ + +
Sbjct: 238 GNAFATGSDDATCRL 252
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 91.8 bits (226), Expect = 9e-21
Identities = 59/320 (18%), Positives = 126/320 (39%), Gaps = 36/320 (11%)
Query: 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTA 278
++T + + +S+DG L + + +Y G+ ++ + ++ ++
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 279 IH----------------ASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322
A+ D +R + + K V GH + + SL+ P D
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 323 ISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+SGS D+TVR+WDLR + + G +A +G A G +++++D +
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 382 KGPFASFKCPGERGCEW--TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQS------- 432
+ G + + F+ DG+ ++ + ++L++ N N
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 433 --LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL- 489
+ + L T + +++ SGS D V W+ + G + +L G H ++V S+
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVA 357
Query: 490 -----QFNPKYHMLASACSN 504
P+Y++ A+ +
Sbjct: 358 VANGSSLGPEYNVFATGSGD 377
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.5 bits (215), Expect = 2e-19
Identities = 63/378 (16%), Positives = 119/378 (31%), Gaps = 32/378 (8%)
Query: 124 AQKAVPKILKIVAKSENMCNLTKLDLPYNKL------GSWDFELLHSLSSLESPHFVS-- 175
K +P L + L K Y L D EL SL V
Sbjct: 12 HSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS 71
Query: 176 ----LFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSS 231
T ++ + S +R + N + I S+ +S
Sbjct: 72 NDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131
Query: 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291
DG L + ++D I I+D E + + + + + S + S T+R
Sbjct: 132 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR--TVRI 189
Query: 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNK 351
L + + +GS D+ VRVWD V +
Sbjct: 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES 249
Query: 352 PIA--------AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW----- 398
+ +G + G S+KL+++++ + + G +
Sbjct: 250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD 309
Query: 399 --TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG---VLNNNASPLEATFTPDSQ 453
+ + + + IL + + +D +GN + L G + + A ++ P+
Sbjct: 310 FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN 369
Query: 454 FVASGSTDGQVHIWNAER 471
A+GS D + IW ++
Sbjct: 370 VFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.0 bits (115), Expect = 8e-07
Identities = 41/234 (17%), Positives = 85/234 (36%), Gaps = 34/234 (14%)
Query: 305 GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-----------------L 347
H V + S D +++ +KT +V+ + + V +
Sbjct: 60 DHTSVVCCVKFSN-DGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 348 SGNKPI--AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP 405
S + I + P+G A G I+++D+ + ++ P
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF-----P 173
Query: 406 DGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465
G ++ + +R++D G C + + + A D +++A+GS D V
Sbjct: 174 SGDKLVSGSGDRTVRIWDLRTGQCSLT---LSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 230
Query: 466 IWNAERGYKVCVLDGD------HPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513
+W++E G+ V LD + H +V S+ F + S + + + L
Sbjct: 231 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.6 bits (93), Expect = 3e-04
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 18/128 (14%)
Query: 398 WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457
L + TN I A L L++ + F+ D +++A+
Sbjct: 20 LLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLAT 79
Query: 458 GSTDGQVHIWNAERGYKVCVLDGD-----------------HPSAVQSLQFNPKYHMLAS 500
G + ++ G V L D ++S+ F+P LA+
Sbjct: 80 GC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 138
Query: 501 ACSNMAFW 508
+
Sbjct: 139 GAEDRLIR 146
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.4 bits (199), Expect = 2e-17
Identities = 53/301 (17%), Positives = 107/301 (35%), Gaps = 22/301 (7%)
Query: 210 SYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLI 269
+ KV + + D + + G+ ++S SDD+ + ++ G T+ GV
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 63
Query: 270 KFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDK 329
+ + + + + + + + +SGS D
Sbjct: 64 QMRDNIIISGSTDR------TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117
Query: 330 TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFK 389
T+RVWD + + + + +G G +K++D + + +
Sbjct: 118 TLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET--CLHTLQ 174
Query: 390 CPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449
G DG ++ + + IR++D GNC+ +L+G + +
Sbjct: 175 -----GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-----ME 224
Query: 450 PDSQFVASGSTDGQVHIWNAERGYKVCV--LDGDHPSAVQSLQFNPKYHMLASACSNMAF 507
+ SG+ D V IW+ + G + H SAV LQFN + + +S +
Sbjct: 225 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284
Query: 508 W 508
W
Sbjct: 285 W 285
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.2 bits (188), Expect = 5e-16
Identities = 33/236 (13%), Positives = 82/236 (34%), Gaps = 17/236 (7%)
Query: 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298
S D + ++D E G + + V +++ S D ++
Sbjct: 113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR----RVVSGAYDFMVKVWDPETET 168
Query: 299 YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP 358
+ GH +V +L +SGS D ++RVWD+ N + + +
Sbjct: 169 CLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMEL 225
Query: 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418
+ G ++K++D+++ + + ++ S++
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC----LQFNKNFVITSSDDGT 281
Query: 419 IRLFDAFNGNCVQSLSGVLN--NNASPLEATFTPDSQFVASGSTDG----QVHIWN 468
++L+D G +++L + + + + A GS +G ++ + +
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.7 bits (122), Expect = 8e-08
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Query: 423 DAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDH 482
+ L G + + + SGS D + +W+A G + L G H
Sbjct: 2 RRGELKSPKVLKG----HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H 56
Query: 483 PSAVQSLQFNPKYHMLASACSNMAFW 508
V S Q + S + W
Sbjct: 57 TGGVWSSQMRDNIIISGSTDRTLKVW 82
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.7 bits (122), Expect = 9e-08
Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 12/160 (7%)
Query: 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288
DG ++S S D I ++D E G +T+ + ++ + I S D+T
Sbjct: 183 LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADST 238
Query: 289 LRYLSLHDNKYVRYFPGHVRKVSSLNL-SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL 347
++ + + ++ G + S++ + I+ S D TV++WDL+ + +
Sbjct: 239 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 298
Query: 348 SGNKPI------AAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+ L A+G + + + + D
Sbjct: 299 LESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK-LLVLD 337
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (106), Expect = 9e-06
Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 10/117 (8%)
Query: 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288
++L+S + D + I+D + G T+ ++ D T
Sbjct: 223 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS-AVTCLQFNKNFVITSSDDGT 281
Query: 289 LRYLSLHDNKYVRYFP-----GHVRKVSSLNLSPVDDSFISGSYDKT----VRVWDL 336
++ L +++R G V + S GS + T + V D
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.6 bits (197), Expect = 3e-17
Identities = 53/289 (18%), Positives = 102/289 (35%), Gaps = 20/289 (6%)
Query: 190 SLAHSRSSRTITKCSENLVRSYRVAK----------VFRENTDKINSLDYSSDGSLLISC 239
++ S +R + + V+ + ++ + I S DG LI
Sbjct: 56 AVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115
Query: 240 SDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299
+ + I+D T + S + + S D + LH+
Sbjct: 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175
Query: 300 VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPE 359
VR F GH S +++S +G D TVR WDLR+ + + Y P
Sbjct: 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235
Query: 360 GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSII 419
G A+G+ S ++++ V D LKF+ GK + + +++
Sbjct: 236 GEWLAVGMESSNVEVLHVNKPD------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289
Query: 420 RLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468
+ G + ++S L + D +++ +GS D + ++
Sbjct: 290 NAWRTPYGASIFQSKE----SSSVLSCDISVDDKYIVTGSGDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (171), Expect = 6e-14
Identities = 34/289 (11%), Positives = 81/289 (28%), Gaps = 17/289 (5%)
Query: 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-----NSKKYGVDLIKFTHSK 275
+ + ++ S+ + + + ++D +K+ + ++ + K
Sbjct: 51 GEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 276 TTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
T I ++ L+ + +L +SP S D + VWD
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 336 LRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERG 395
L V Q + D+ + +
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-----QLQQHDFT 224
Query: 396 CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV 455
+ L + P G+ + V S + + + Q + + + L F ++
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ----LHLHESCVLSLKFAYCGKWF 280
Query: 456 ASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504
S D ++ W G + S+V S + + + +
Sbjct: 281 VSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGD 327
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 12/79 (15%), Positives = 22/79 (27%)
Query: 299 YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP 358
H V SL + F+S D + W ++ + S +
Sbjct: 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV 316
Query: 359 EGLAFAIGVNSDSIKLYDV 377
+ G +Y+V
Sbjct: 317 DDKYIVTGSGDKKATVYEV 335
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 77.2 bits (188), Expect = 5e-16
Identities = 41/315 (13%), Positives = 96/315 (30%), Gaps = 25/315 (7%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK---KYGVDL 268
++ ++ + D I+ + SLL+ S D + +Y + + K+ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 269 IKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD 328
F + I+ T L+ + + DD I+ S+D
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 329 KTVRVWDLRQPNNVGMIQ-------LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+ V D R + + I D +G+N+ ++ + +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL-C 180
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNA 441
+ + + G + + + S+ + + + + S
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC 240
Query: 442 SPLEAT------------FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL 489
L F+P +F+ + +DG + WN + K+ + +V +
Sbjct: 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300
Query: 490 QFNPKYHMLASACSN 504
+ L A S+
Sbjct: 301 ACSDNI--LCLATSD 313
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.5 bits (116), Expect = 5e-07
Identities = 24/310 (7%), Positives = 73/310 (23%), Gaps = 34/310 (10%)
Query: 190 SLAHSRSSRTITKCSE-NLVRSYRVA--------KVFRENTDKINSLDYSSDGSLLISCS 240
+ S + S + Y+ + ++ + L I
Sbjct: 16 DIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG 75
Query: 241 DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300
I+ G+ + I + D + + +
Sbjct: 76 TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDG 135
Query: 301 RYFPGHVRKVSSLNLSPVDDSFISGSY------DKTVRVWDLRQPNNVG-----MIQLSG 349
++ ++ + + + S + V+ + L +
Sbjct: 136 VIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ 195
Query: 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP----------GERGCEWT 399
+ +A E +A + + +S +
Sbjct: 196 IRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN 255
Query: 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459
++FSP K + + + II ++ +++ + ++ + +
Sbjct: 256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSV----VKIACSDNILCLAT 311
Query: 460 TDGQVHIWNA 469
+D A
Sbjct: 312 SDDTFKTNAA 321
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 2e-05
Identities = 13/111 (11%), Positives = 33/111 (29%), Gaps = 1/111 (0%)
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS-QFVAS 457
+ +K P L+L+++ + ++ L L L F ++ +
Sbjct: 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74
Query: 458 GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
G+ G++ + L + + L +A +
Sbjct: 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 73.0 bits (177), Expect = 9e-15
Identities = 40/307 (13%), Positives = 86/307 (28%), Gaps = 13/307 (4%)
Query: 175 SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRV-----AKVFRENTDKINSLDY 229
+LF + A L ++ + I C+ V + V +++ E++ +
Sbjct: 7 ALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKT 66
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289
S G S + I+D Q T + + + + A+
Sbjct: 67 SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 126
Query: 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349
+ + + ++ + + G
Sbjct: 127 FGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG 186
Query: 350 NK----PIAAYDPEGLAFAIGVNSDSIKLYDVRS--YDKGPFASFKCPGERGCEWTGLKF 403
Y+P+G FA +I LY+ GL +
Sbjct: 187 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 246
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ 463
SPDG I ++ I++++ +++ + Q + S S +G
Sbjct: 247 SPDGTKIASASADKTIKIWNVATLKVEKTIPV--GTRIEDQQLGIIWTKQALVSISANGF 304
Query: 464 VHIWNAE 470
++ N E
Sbjct: 305 INFVNPE 311
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 68.4 bits (165), Expect = 3e-13
Identities = 41/292 (14%), Positives = 78/292 (26%), Gaps = 8/292 (2%)
Query: 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAS 282
L + G + C+ + T + + K + S
Sbjct: 19 TAVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD 77
Query: 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342
+ + + + P V ++ + I+ + R + +
Sbjct: 78 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTG 136
Query: 343 GMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLK 402
+ A + V ++ PF GE ++
Sbjct: 137 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 196
Query: 403 FSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN----ASPLEATFTPDSQFVASG 458
++PDG L + I L++ +G N S T++PD +AS
Sbjct: 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256
Query: 459 STDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFW 508
S D + IWN + Q L L S +N + F
Sbjct: 257 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.4 bits (126), Expect = 3e-08
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 6/123 (4%)
Query: 388 FKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446
F P L +P G + NG+ + + + + ++ A
Sbjct: 9 FPSLPRTARGTAVVLGNTPAGD-KIQYCNGTSVYTVPVGSLTDTEIYTE---HSHQTTVA 64
Query: 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-HPSAVQSLQFNPKYHMLASACSNM 505
+P + ASG G V IW+ + + V+ + ++ + +A+
Sbjct: 65 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR 124
Query: 506 AFW 508
+
Sbjct: 125 ERF 127
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.0 bits (172), Expect = 3e-14
Identities = 48/299 (16%), Positives = 104/299 (34%), Gaps = 32/299 (10%)
Query: 215 KVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHS 274
E + + L Y D ++S D+ I I+D K + V +++
Sbjct: 9 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66
Query: 275 KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVW 334
+ + V N + + + + ++ S D+++ VW
Sbjct: 67 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR------FNNGMMVTCSKDRSIAVW 120
Query: 335 DLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD--SIKLYDVRSYDKGPFASFKCPG 392
D+ P ++ + ++ A + I S +IK+++ + + +
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE--FVRTLN--- 175
Query: 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS 452
G + +L++ ++ + IRL+D G C++ L G L D+
Sbjct: 176 --GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH-----EELVRCIRFDN 228
Query: 453 QFVASGSTDGQVHIWNAERGYKVCVLDGD--------HPSAVQSLQFNPKYHMLASACS 503
+ + SG+ DG++ +W+ G H V LQF+ + S+
Sbjct: 229 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSH 285
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (115), Expect = 5e-07
Identities = 32/214 (14%), Positives = 74/214 (34%), Gaps = 13/214 (6%)
Query: 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIA 354
H + + + V L D +SG D T+++WD ++ +
Sbjct: 3 HSLQRIHCRSETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNTLECKRILT-GHTGSVL 59
Query: 355 AYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST 414
+ G + +++++DV + + C + +
Sbjct: 60 CLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTC-------S 112
Query: 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474
I ++D + + ++ + A+ F D +++ S S D + +WN
Sbjct: 113 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 170
Query: 475 VCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
V L+G H + LQ+ + + S+ + + W
Sbjct: 171 VRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLW 203
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (115), Expect = 6e-07
Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 7/125 (5%)
Query: 216 VFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSK 275
V N K L++S S D+ I ++D E G + + V I+F + +
Sbjct: 171 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR 230
Query: 276 TTAIHASTKV-----DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKT 330
+ K+ A L + +R H +V L +S S+D T
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE--FQIVSSSHDDT 288
Query: 331 VRVWD 335
+ +WD
Sbjct: 289 ILIWD 293
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.8 bits (161), Expect = 1e-12
Identities = 41/342 (11%), Positives = 85/342 (24%), Gaps = 36/342 (10%)
Query: 190 SLAHSRSSRTITKCSEN-LVRSYRVA-------KVFRENTDKINSLDYSSDGSLLISCSD 241
A ++ I C N V Y + +E+ ++ +D++ D + +++C
Sbjct: 12 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 71
Query: 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK--- 298
D ++ + T K T+ + + A +
Sbjct: 72 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 131
Query: 299 -YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYD 357
V SL+ P +GS D R++ + +
Sbjct: 132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG 191
Query: 358 PEGLAFAI---GVNSDSIKLYD-----------VRSYDKGPFASFKCPGERGCEWTGLKF 403
+ V+ V D + + F
Sbjct: 192 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTF 251
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ 463
+ L+ + LF + S G L+ + T +F + D +
Sbjct: 252 ITESSLVAAGHDCF-PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF---QNLDKK 307
Query: 464 VHIWNAERGYKVCVLDGDHPSAVQSLQFNP----KYHMLASA 501
LD H ++V + K +
Sbjct: 308 ASSEG--SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTT 347
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.9 bits (138), Expect = 1e-09
Identities = 35/301 (11%), Positives = 82/301 (27%), Gaps = 62/301 (20%)
Query: 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHA 281
+ I+ ++ D + + C ++ ++ IY+
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQ------------------------ 43
Query: 282 STKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN 341
V H +V+ ++ +P + ++ D+ VW L+
Sbjct: 44 ------------------VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 85
Query: 342 VGMIQLS---GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398
+ + + P FA+G S I + + R
Sbjct: 86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 145
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE------------- 445
+ L S + R+F A+ + + + P
Sbjct: 146 SLDWHPNSVLLAAGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 204
Query: 446 --ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503
F+ + VA S D V + +A++ + ++ F + ++A+
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAGHD 263
Query: 504 N 504
Sbjct: 264 C 264
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.2 bits (136), Expect = 2e-09
Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA-TFTPDSQFVAS 457
+ ++ D I + N + +++ VQ L + + + PDS + +
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQV--HELKEHNGQVTGVDWAPDSNRIVT 68
Query: 458 GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFW 508
TD ++W + L + + S
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 119
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.9 bits (125), Expect = 5e-08
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 448 FTPDSQFVASGSTDGQVHIWNAERG--YKVCVLDGDHPSAVQSLQFNPKYHMLASACSNM 505
+ D +A + +VHI+ +V L H V + + P + + + ++
Sbjct: 15 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDR 73
Query: 506 AFWI 509
++
Sbjct: 74 NAYV 77
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.4 bits (121), Expect = 1e-07
Identities = 16/139 (11%), Positives = 42/139 (30%), Gaps = 8/139 (5%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
T + ++ + ++ SL+ + D +++ + K + +
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITESSLVAAGHDC-FPVLFTYDSAAGKLSFGGRLDVPK 288
Query: 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS----FI 323
+ + TA +D H VS +++ + F
Sbjct: 289 --QSSQRGLTARERFQNLDKKAS-SEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 345
Query: 324 SGSYDKTVRVWDLRQPNNV 342
+ D + +WD+R +
Sbjct: 346 TTGMDGGMSIWDVRSLESA 364
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.3 bits (100), Expect = 4e-05
Identities = 21/174 (12%), Positives = 48/174 (27%), Gaps = 5/174 (2%)
Query: 302 YFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG-NKPI--AAYDP 358
Y V +S + + V +++ V + +L N + + P
Sbjct: 2 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP 61
Query: 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSI 418
+ + ++ ++ P + S SI
Sbjct: 62 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121
Query: 419 IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERG 472
+ ++ L + P+S +A+GS D + I++A
Sbjct: 122 CYFEQ--ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 173
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 66.4 bits (160), Expect = 2e-12
Identities = 38/316 (12%), Positives = 79/316 (25%), Gaps = 52/316 (16%)
Query: 216 VFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSKKY- 264
+ + + + + DGS + S D + ++D I
Sbjct: 41 IGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 100
Query: 265 ------GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPV 318
+ T T + + + L + R
Sbjct: 101 RFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD---CYHIFPTA 157
Query: 319 DDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI-------AAYDPEGLAFAIGVNSDS 371
D+F D ++ + P AY + +
Sbjct: 158 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGK 217
Query: 372 IKLYDVRSYD-------KGPFASFKCPGERGCEWTGLKFSPDGKLILV----------ST 414
I D+ S D + + + G R W + + I + T
Sbjct: 218 IHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 277
Query: 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ--FVASGSTDGQVHIWNAERG 472
+ + DA G + + D + A + D ++I +AE G
Sbjct: 278 ASRFVVVLDAKTGERLAKFEM----GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 333
Query: 473 YKVCVLD--GDHPSAV 486
++ ++ G P +
Sbjct: 334 EELRSVNQLGHGPQVI 349
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 23/198 (11%), Positives = 49/198 (24%), Gaps = 24/198 (12%)
Query: 186 TMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQI 245
S + +E E+ IN YS L+ + +I
Sbjct: 159 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKI 218
Query: 246 IIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAI------------------HASTKV 285
D G + + + +
Sbjct: 219 HQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 278
Query: 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS--FISGSYDKTVRVWDLRQPNNVG 343
+ L + + F ++ S+N+S + + + DKT+ + D +
Sbjct: 279 SRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 337
Query: 344 MIQLSGNKP-IAAYDPEG 360
+ G+ P + G
Sbjct: 338 SVNQLGHGPQVITTADMG 355
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 45.6 bits (106), Expect = 9e-06
Identities = 29/204 (14%), Positives = 53/204 (25%), Gaps = 24/204 (11%)
Query: 324 SGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG--LAFA--------IGVNSDSIK 373
+ V D +GMI G P +G +A A G +D ++
Sbjct: 23 HFAAVTQQFVIDGEAGRVIGMID-GGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVE 81
Query: 374 LYDVRSYD--KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS--IIRLFDAFNGNC 429
++D + G +PDGK +L + + D
Sbjct: 82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 141
Query: 430 VQSLSG----VLNNNASPLEATFTPDSQFVASGST-DGQVHIWNAERGYKVCVLDGDHPS 484
+ L + A D +G I + E + +HP+
Sbjct: 142 KRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 201
Query: 485 AVQSLQFNPKYHMLASACSNMAFW 508
Q + + +
Sbjct: 202 YSQ----KAGRLVWPTYTGKIHQI 221
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.5 bits (93), Expect = 3e-04
Identities = 15/121 (12%), Positives = 32/121 (26%), Gaps = 21/121 (17%)
Query: 403 FSPDGKLILVSTNGSI-----IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA- 456
+PD + + V+ + D G + + G N D F+A
Sbjct: 9 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-----PVVADDGSFIAH 63
Query: 457 ---------SGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAF 507
G V +++ ++ + + P L + F
Sbjct: 64 ASTVFSRIARGERTDYVEVFDPVTLLPTADIE-LPDAPRFLVGTYPWMTSLTPDGKTLLF 122
Query: 508 W 508
+
Sbjct: 123 Y 123
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 65.0 bits (156), Expect = 3e-12
Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 10/295 (3%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTI-NSKKYGVDLIK 270
+ +V + I +L S+DG L S + I +D G S + + IK
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 271 FTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKT 330
T + + + + L +S D ++ Y
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC 390
+ + +S N A + A+G + +Y + +
Sbjct: 123 AIYS----HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 391 PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450
P E + + + + N + + + A +++P
Sbjct: 179 PAEITSVAFSNNGAFLVA----TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 234
Query: 451 DSQFVASGSTDGQVHIWNAERGYKVCVL-DGDHPSAVQSLQFNPKYHMLASACSN 504
D+ +A+GS D V +WN + ++ G H + + + SA +
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 55.8 bits (132), Expect = 3e-09
Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 427 GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAV 486
G+ Q G +N + + + D + + S +G ++ W+ G V H + +
Sbjct: 2 GSIDQVRYG---HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 58
Query: 487 QSLQFNPKYHMLASACSNMAFWIPT 511
++ K + + + +P
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVPA 83
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.4 bits (92), Expect = 3e-04
Identities = 7/68 (10%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 271 FTHSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYD 328
+ S A+ +D ++ +++ + H + + + + +S D
Sbjct: 230 VSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289
Query: 329 KTVRVWDL 336
++ W++
Sbjct: 290 SNIKFWNV 297
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 63.5 bits (153), Expect = 2e-11
Identities = 27/288 (9%), Positives = 60/288 (20%), Gaps = 39/288 (13%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY-------GVDLIKFTHSKTTAIHAS 282
S+ + D + ++D I V +I S +
Sbjct: 83 STSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142
Query: 283 TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV 342
+ LS+ + + GS ++ DL
Sbjct: 143 FG-SSAAAGLSVPGASDDQLTKSAS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAA 198
Query: 343 GMIQLSGNKPIAAYDPEGLAFAIG---VNSDSIKLYDVRSYDKGPFASFKCP-------- 391
I + + V + + + G
Sbjct: 199 AGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKA 258
Query: 392 -GERGCEWTGLKFSPDGKLILVSTNGSI---------IRLFDAFNGNCVQSLSGVLNNNA 441
R + + + I++ T A G +S
Sbjct: 259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GH 314
Query: 442 SPLEATFTPDSQ--FVASGSTDGQVHIWNAERGYKVCVLD-GDHPSAV 486
D A+ + + I++A ++ P ++
Sbjct: 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESL 362
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 43.0 bits (100), Expect = 5e-05
Identities = 15/197 (7%), Positives = 46/197 (23%), Gaps = 31/197 (15%)
Query: 189 ASLAHSRSSRT--ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQII 246
S + + A+ + + G L+ + +
Sbjct: 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQG 236
Query: 247 IYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG- 305
T K I+ + G F + + + + ++
Sbjct: 237 DIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK--NTDGIMILTVEHSRSCLAAAE 294
Query: 306 -----------------HVRKVSSLNLSPVDDS--FISGSYDKTVRVWDLRQPNNVGMIQ 346
+ ++ + S + + + + + ++D + ++
Sbjct: 295 NTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
Query: 347 LSGNKPIAAYDPEGLAF 363
L PE L+
Sbjct: 355 LDKG-------PESLSV 364
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.6 bits (150), Expect = 3e-11
Identities = 40/361 (11%), Positives = 103/361 (28%), Gaps = 67/361 (18%)
Query: 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS------KKYGVD 267
A + + I S+ + +SCS D + ++D + ++N + K G+
Sbjct: 7 ANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 268 LIKF-----THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD--- 319
+ + + A+T L + + + + ++
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 320 ------------DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI-------------- 353
++ T +W + P
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184
Query: 354 -----AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW-TGLKFSPDG 407
GL A G N+ ++++ ++ + + +KFSP G
Sbjct: 185 QFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243
Query: 408 KLILVSTNGSIIRLFDAFNGNC-------------VQSLSGVLNNNASPLEATFTPDSQF 454
L+ ++ + + + Q+ G +++ + +F +
Sbjct: 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 303
Query: 455 VASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQ----SLQFNPKYHMLASACSNMAFWIP 510
+ S DG++ W+ + ++ L+ H ++ L + LA ++
Sbjct: 304 LCSAGWDGKLRFWDVKTKERITTLNM-HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 362
Query: 511 T 511
Sbjct: 363 K 363
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.6 bits (119), Expect = 2e-07
Identities = 28/305 (9%), Positives = 79/305 (25%), Gaps = 54/305 (17%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIH--------- 280
+ + L+ + S ++ Y + + +K + A+
Sbjct: 76 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 135
Query: 281 ----ASTKVDATLRYLSLHDNKY------------------VRYFPGHVRKVSSLNLSPV 318
+T V T H V + +S+++S
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE- 194
Query: 319 DDSFISGSYDKTVRVWDLRQPNNVGMIQ-----LSGNKPIAAYDPEGLAFAIGVNSDSIK 373
+G + TV++ +L + + ++ + I + + + DS
Sbjct: 195 RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS 254
Query: 374 LYDVRSYDKGPFASFKCPGERGCEWTGLK-------------FSPDGKLILVSTNGSIIR 420
+ Y+ F+ G+ + + +R
Sbjct: 255 FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 314
Query: 421 LFDAFNGNCVQSLSGVLNN-NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD 479
+D + +L+ ++ +A + ++G++ +
Sbjct: 315 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD---VKFLKKGWRSGMGA 371
Query: 480 GDHPS 484
+ S
Sbjct: 372 DLNES 376
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.9 bits (99), Expect = 7e-05
Identities = 30/211 (14%), Positives = 67/211 (31%), Gaps = 24/211 (11%)
Query: 194 SRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG 253
+ S ++T + + + S+D S G L+ + ++ + I +
Sbjct: 157 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL 215
Query: 254 TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL--------------------RYLS 293
S+ ++ S + S A +
Sbjct: 216 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP 275
Query: 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI 353
H ++ H V SL+ + ++ S +D +R WD++ + L+ +
Sbjct: 276 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT--TLNMHCDD 333
Query: 354 AAYDPEGLAFAIGVNSD-SIKLYDVRSYDKG 383
+ + LA +S ++DV+ KG
Sbjct: 334 IEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 364
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.2 bits (92), Expect = 5e-04
Identities = 15/121 (12%), Positives = 34/121 (28%), Gaps = 10/121 (8%)
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSL----------SGVLNNNASPLEATFTPDSQ 453
S + + ++++D + SG+ + + +
Sbjct: 21 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80
Query: 454 FVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513
VA+ S G + + R + + + + S + L SN L
Sbjct: 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 140
Query: 514 A 514
A
Sbjct: 141 A 141
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 61.8 bits (148), Expect = 6e-11
Identities = 21/300 (7%), Positives = 66/300 (22%), Gaps = 20/300 (6%)
Query: 220 NTDKINSLDYSSDGSLLISCSDDD--QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTT 277
+I + D + + + IYD G ++ + + + K
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFA 100
Query: 278 AIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVS-------SLNLSPVDDSFISGSYDKT 330
+ T+ + R + + P+ G +
Sbjct: 101 VVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 160
Query: 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC 390
+ V+D+ + + A+D + D + K
Sbjct: 161 IHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKP 220
Query: 391 PGERGCEW--TGLKFSPDGKLILVS----TNGSIIRLFDAFNGNCVQSLSGVLNNNASPL 444
K P + + + + + ++
Sbjct: 221 FVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYS 280
Query: 445 EATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN 504
+ + G + ++ + + + + L+ + + +
Sbjct: 281 VPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-----EVKNNLTDLRLSADRKTVMVRKDD 335
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 61.8 bits (148), Expect = 6e-11
Identities = 18/197 (9%), Positives = 48/197 (24%), Gaps = 17/197 (8%)
Query: 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL------- 347
+ + + + + SY D N +
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225
Query: 348 -SGNKPIAAYDPEGLAFAIG--VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFS 404
G+ P + G +D K + D G + ++
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285
Query: 405 PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQV 464
+ ++ +D + + + + + D + V DG++
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTD-------LRLSADRKTVMVRKDDGKI 338
Query: 465 HIWNAERGYKVCVLDGD 481
+ + E+ ++ D
Sbjct: 339 YTFPLEKPEDERTVETD 355
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.2 bits (92), Expect = 5e-04
Identities = 8/40 (20%), Positives = 18/40 (45%)
Query: 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN 260
+ + L S+D ++ DD +I + E+ + T+
Sbjct: 314 KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 37.1 bits (84), Expect = 0.003
Identities = 22/200 (11%), Positives = 52/200 (26%), Gaps = 8/200 (4%)
Query: 314 NLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI--AAYDPEG--LAFAIGVNS 369
+ SP+D I+ + D+ + ++++ I +
Sbjct: 9 DFSPLDGDLIAFVSRGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREG 65
Query: 370 DSIKLYDVRSYD-KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428
D + +YD R+ + + G + G + T +
Sbjct: 66 DFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 125
Query: 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQS 488
++ ++ S A P G +H+++ E + +
Sbjct: 126 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPA 185
Query: 489 LQFNPKYHMLASACSNMAFW 508
+ K S S
Sbjct: 186 FDADSKNLYYLSYRSLDPSP 205
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 61.0 bits (146), Expect = 8e-11
Identities = 32/300 (10%), Positives = 72/300 (24%), Gaps = 37/300 (12%)
Query: 224 INSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDL-----IKFTHSKTT 277
+ G + + + ++ D G + I+ + + T
Sbjct: 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT 95
Query: 278 AIHASTKVDATLRYLSLHDNKY---------VRYFPGHVRKVSSLNLSPVDDSFISGSYD 328
+ V L + + + R R+++ L + D
Sbjct: 96 LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD 155
Query: 329 KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASF 388
V + IQ + A D + + + D P
Sbjct: 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215
Query: 389 KCPGE------RGCEWTGLKFSPDGKLI----------LVSTNGSIIRLFDAFNGNCVQS 432
E + +++ FD ++
Sbjct: 216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKR 275
Query: 433 LSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD--GDHPSAVQSLQ 490
+ S + D V G G + ++AE K +D G+ ++ S++
Sbjct: 276 V----PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVR 331
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 58.3 bits (139), Expect = 6e-10
Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 14/202 (6%)
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQL--SGNKPIA-AYDPEG-LAFAIGVNSDSIKLYDV 377
++ + + V D + +I + +G P+ P G +A+A S+S+ D+
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437
+ + P ER G SPDGK + + + + L +L
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 438 NN--------NASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL 489
+ D + D V G V A
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE--AGTLVEDKPIQSWEAETYA 181
Query: 490 QFNPKYHMLASACSNMAFWIPT 511
Q + S +
Sbjct: 182 QPDVLAVWNQHESSGVMATPFY 203
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 45.6 bits (106), Expect = 9e-06
Identities = 20/139 (14%), Positives = 38/139 (27%), Gaps = 4/139 (2%)
Query: 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAI 279
D + ++ D E G +D+ F+ + A
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR---IMDVFYFSTAVNPAK 252
Query: 280 HASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP 339
+ L L N ++ P S+N+S + G + +D
Sbjct: 253 TRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311
Query: 340 NNVGMIQLSGNKPIAAYDP 358
G + L GN ++
Sbjct: 312 EKKGQVDLPGNASMSLASV 330
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.6 bits (137), Expect = 1e-09
Identities = 30/305 (9%), Positives = 77/305 (25%), Gaps = 24/305 (7%)
Query: 188 AASLAHSRSSRTITKCSEN--LVRSY--------RVAKVFRENTDKINSLDYS--SDGSL 235
L++ ++ I VR V + + + ++ +S
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 236 LISCSDDDQIIIYDCEQGTSKNTINSKKYG--------VDLIKFTHSKTTAIHASTKVDA 287
L S + ++I++ N++ + I + D
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 139
Query: 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD----SFISGSYDKTVRVWDLRQPNNVG 343
++S + GH +++++ +L + + + +
Sbjct: 140 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR 199
Query: 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF 403
G+ + K+ + E
Sbjct: 200 THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALS 259
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQ 463
D + + IR++D CVQ + + + + S S DG
Sbjct: 260 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 319
Query: 464 VHIWN 468
++ +
Sbjct: 320 LNFYE 324
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.3 bits (131), Expect = 6e-09
Identities = 41/300 (13%), Positives = 83/300 (27%), Gaps = 19/300 (6%)
Query: 223 KINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYG-----VDLIKFTHSKTT 277
L Y + + + + G SK + G V +KF+ K +
Sbjct: 19 FTTHLSYDPTTNAIAYPCGKS-AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 278 AIHASTKVDATLRYLSLHDNKYVRYF--------PGHVRKVSSLNLSPVDDSFISGSY-- 327
S + +K +S ++
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 137
Query: 328 DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFAS 387
D N++G + + A + + D + + AS
Sbjct: 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 197
Query: 388 FKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446
+ ++G ++FSPD G+ ++ + I FD +G ++ + + A
Sbjct: 198 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 257
Query: 447 TFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-HPSAVQSLQFNP-KYHMLASACSN 504
DSQ A+ D + +W+ V D Q + + S +
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 2e-05
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 281 ASTKVDATLRYLSLHDNKYVRYFPGHVRKVS--SLNLSPVDDSFI-SGSYDKTVRVWDL 336
A+ DAT+R + +K V+ + +++ + + + I S S D T+ ++L
Sbjct: 267 ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.2 bits (136), Expect = 1e-09
Identities = 44/318 (13%), Positives = 83/318 (26%), Gaps = 14/318 (4%)
Query: 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVD 267
+ + + + +L Y+ G +L+S S D + ++D ++G + V
Sbjct: 40 SINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR 98
Query: 268 LIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY 327
+ K + D TL L V + + F+
Sbjct: 99 CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 158
Query: 328 DKTVRVWDLRQP----------NNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377
V + N + + ++ K + + K
Sbjct: 159 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS 218
Query: 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437
S D GE G + S +
Sbjct: 219 ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS 278
Query: 438 NNNASPLE-ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH 496
++ + TF + SGS + Q +I+N G V + S+ F K
Sbjct: 279 YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL 337
Query: 497 MLASACSNMAF-WIPTLS 513
+ A +F I S
Sbjct: 338 VAAVEKDGQSFLEILDFS 355
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.1 bits (133), Expect = 4e-09
Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 1/139 (0%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289
+ + +I+ +DD I +YD ++ GV +K+ H ST +
Sbjct: 20 QFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVS-GSTDRTVRV 78
Query: 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349
+ +V + + ++GS D T+ VW L + ++V
Sbjct: 79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138
Query: 350 NKPIAAYDPEGLAFAIGVN 368
+ P+ + PE + +GV
Sbjct: 139 DYPLVFHTPEENPYFVGVL 157
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.0 bits (125), Expect = 3e-08
Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 448 FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAF 507
+ +V +G+ D + ++++ + L G H V +L++ +L S ++
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHG-GILVSGSTDRTV 76
Query: 508 W 508
Sbjct: 77 R 77
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.3 bits (100), Expect = 5e-05
Identities = 28/208 (13%), Positives = 63/208 (30%), Gaps = 10/208 (4%)
Query: 303 FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI--AAYDPEG 360
GH+ V + L D+ I+G+ DK +RV+D + + + + Y G
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGG 65
Query: 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIR 420
+ + + + V KG + + K I+ + + +
Sbjct: 66 ILVS----GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 421 LFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480
++ + V ++ + T + FV + G V
Sbjct: 122 VWKLPKESSVPDHGE--EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY 179
Query: 481 DHPSAVQSLQFNPKYHMLASACSNMAFW 508
D+ V + ++L+ +
Sbjct: 180 DNTLIVWDVAQMKCLYILSGHTDRIYST 207
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 54.7 bits (130), Expect = 9e-09
Identities = 12/116 (10%), Positives = 38/116 (32%), Gaps = 8/116 (6%)
Query: 400 GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV-ASG 458
G + ++V+ + + + D + +S + + P A PD++
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV--MPDKFGPGTAMMAPDNRTAYVLN 58
Query: 459 STDGQVHIWNAERGYKVCVLD-----GDHPSAVQSLQFNPKYHMLASACSNMAFWI 509
+ G ++ + + + G+ ++ S +P + + +
Sbjct: 59 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLN 114
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 54.7 bits (130), Expect = 1e-08
Identities = 24/330 (7%), Positives = 73/330 (22%), Gaps = 51/330 (15%)
Query: 208 VRSYRVAKVFR-ENTDKINSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTIN----- 260
V S V K + + + D + + I D + + N
Sbjct: 25 VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP 84
Query: 261 -SKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVD 319
+ + + + + + + + P+
Sbjct: 85 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP 144
Query: 320 D--SFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377
+ + D ++ V ++ + + K A D + +
Sbjct: 145 RQVYLMRAADDGSLYVAG----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 200
Query: 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI--------------------------- 410
+S + + + +
Sbjct: 201 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 260
Query: 411 -----LVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465
+ + + +D +++ N + + F + G T +
Sbjct: 261 PKDPNQIYGVLNRLAKYDLKQRKLIKAA----NLDHTYYCVAFDKKGDKLYLGGTFNDLA 316
Query: 466 IWNAERGYKVCVLD-GDHPSAVQSLQFNPK 494
++N + KV + + + Q +
Sbjct: 317 VFNPDTLEKVKNIKLPGGDMSTTTPQVFIR 346
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 54.0 bits (128), Expect = 2e-08
Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 9/199 (4%)
Query: 315 LSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-SGNKPIA-AYDPEG-LAFAIGVNSDS 371
L + I +Y + V D+ + P P+ A+ + +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 372 IKLYDVRS-YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG-NC 429
I D+ + + PGE G SPDGK + + N +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL 489
++ S A P+ P ++ + DG +++ + +D +L
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIY----KMDVKTGKYTVAL 179
Query: 490 QFNPKYHMLASACSNMAFW 508
SA + FW
Sbjct: 180 PLRNWNRKGYSAPDVLYFW 198
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 52.8 bits (125), Expect = 4e-08
Identities = 28/317 (8%), Positives = 59/317 (18%), Gaps = 77/317 (24%)
Query: 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATL 289
+ +I + + + + D T + +
Sbjct: 5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP---------DKFGPGTAMMA------- 48
Query: 290 RYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSG 349
DN+ ++ ++ + DL N LS
Sbjct: 49 -----PDNRTA---------------------YVLNNHYGDIYGIDLDTCKNTFHANLSS 82
Query: 350 NKPIAAYDPEGLAFAIG------VNSDSIKLYDVRSYDKGP-----FASFKCPGERGCEW 398
A + + + +L D A
Sbjct: 83 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 142
Query: 399 -----TGLKFSPDGKLILVSTNGSIIRL-------------------FDAFNGNCVQSLS 434
++ + DG L + + + + S
Sbjct: 143 MPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS 202
Query: 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK 494
+ A F D Q A+ + + G D + +PK
Sbjct: 203 PRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPK 262
Query: 495 YHMLASACSNMAFWIPT 511
N
Sbjct: 263 DPNQIYGVLNRLAKYDL 279
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.0 bits (125), Expect = 2e-08
Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 18/292 (6%)
Query: 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKF 271
V K + I +L + LIS S D +I+ + ++ + +
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHS-----NLIVSLDN 54
Query: 272 THSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTV 331
+ ++ + + + + +++ + D + +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114
Query: 332 RVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391
+ L P + + +A EG + SD +D+++ + +
Sbjct: 115 KSVRLNSPGSAVSLS---QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS 171
Query: 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451
G L S R + S A +
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAIS-----WKPAEKGANEEEIE 226
Query: 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503
VA+GS D + I++ +R K+ H V +L + L S+ +
Sbjct: 227 EDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-STLVSSGA 277
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.3 bits (110), Expect = 2e-06
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 280 HASTKVDATLRYLSLHDN-KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335
A+ +D + S+ K ++ H V++L + +S D ++ W+
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.3 bits (105), Expect = 7e-06
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 296 DNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337
++ ++ GH + +++L ++P ISGSYD + W
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS 39
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.6 bits (90), Expect = 5e-04
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 426 NGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA 485
+ ++++SG +N T P + SGS DG++ W++ ++ DH +
Sbjct: 2 HDEVLKTISG---HNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ------DHSNL 48
Query: 486 VQSLQFNPKYHMLASACSNMAFW 508
+ SL + + + +
Sbjct: 49 IVSLDNSKAQEYSSISWDDTLKV 71
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.6 bits (85), Expect = 0.002
Identities = 9/85 (10%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPI- 353
+ + + +D +GS D + ++ +++P + + +
Sbjct: 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN 262
Query: 354 -AAYDPEGLAFAIGVNSDSIKLYDV 377
++ + G ++ IK ++V
Sbjct: 263 NLLWETPSTLVSSGADA-CIKRWNV 286
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 52.3 bits (124), Expect = 8e-08
Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 9/166 (5%)
Query: 351 KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLI 410
K + D L ++ I L D S K G + S G+ +
Sbjct: 23 KQLNDLDLPNLFSVTLRDAGQIALVDGDS--KKIVKVIDT----GYAVHISRMSASGRYL 76
Query: 411 LVSTNGSIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIW 467
LV + I + D + V + + + + ++ +G+ Q I
Sbjct: 77 LVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 136
Query: 468 NAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWIPTLS 513
+ E ++ + A +I +
Sbjct: 137 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 182
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 50.3 bits (119), Expect = 3e-07
Identities = 36/310 (11%), Positives = 83/310 (26%), Gaps = 38/310 (12%)
Query: 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT----INSKKYGVDLIKFTHSKTT 277
++ S+ G L+ D +I + D I + V+ KF +
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDR 121
Query: 278 AIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDL 336
A + + + V + P + I S++ + ++
Sbjct: 122 YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 181
Query: 337 RQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396
++ V ++ + F DS Y + + + + +R
Sbjct: 182 KETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 241
Query: 397 ---------------------EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSG 435
++ + + +S G+ + + V L G
Sbjct: 242 SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 301
Query: 436 ----VLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA---ERGYKV-----CVLDGDHP 483
L P + D+ F V +++ + Y+V G+
Sbjct: 302 QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA 361
Query: 484 SAVQSLQFNP 493
V ++N
Sbjct: 362 KRVVQPEYNK 371
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 41/298 (13%), Positives = 78/298 (26%), Gaps = 29/298 (9%)
Query: 227 LDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD 286
D ++ D QI + D + I++ Y V + + + S + D
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYAVHISRMSASGRYLLVIGR--D 82
Query: 287 ATLRYLSLHDNKY-----VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNN 341
A + + L + ++ SS D I+G+Y +
Sbjct: 83 ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 142
Query: 342 VGMIQLSGNKPI--AAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWT 399
I + + Y PE AI + S + V + G T
Sbjct: 143 PKQIVSTRGMTVDTQTYHPEPRVAAI-IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Query: 400 ---------GLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450
+ + + + N S + +L V A F
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261
Query: 451 DSQ---FVASGSTDGQVHIWNA------ERGYKVCVLDGDHPSAVQSLQFNPKYHMLA 499
+ S DG + + + +K ++ +PK L
Sbjct: 262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLY 319
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 48.3 bits (114), Expect = 1e-06
Identities = 21/158 (13%), Positives = 48/158 (30%), Gaps = 12/158 (7%)
Query: 350 NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD-KGPFASFKCPGERGCEWTGLKFSPDGK 408
+ + +D E L ++ I L D +Y+ K + G + S G+
Sbjct: 22 TQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-------GYAVHISRLSASGR 74
Query: 409 LILVSTNGSIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDSQFV-ASGSTDGQVH 465
+ V + + D + V + + + ++ A Q
Sbjct: 75 YLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 134
Query: 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503
I + E + + +++P+ + A S
Sbjct: 135 IMDGET-LEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 171
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 37.5 bits (86), Expect = 0.003
Identities = 25/229 (10%), Positives = 55/229 (24%), Gaps = 18/229 (7%)
Query: 286 DATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR--QPNNVG 343
+ + + V LS D V + DL +P V
Sbjct: 41 AGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 344 MIQLSGNK----PIAAYDPEG-LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCE- 397
I++ E A A + D + + S + E
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 159
Query: 398 -----WTGLKFSPDGKLILVSTNGS-IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451
+ S +V+ + I L D + N +++ ++ +
Sbjct: 160 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE--ISAERFLHDGGLDGS 217
Query: 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLAS 500
++ + + + + K+ V D +
Sbjct: 218 HRYFITAANARNKLVVIDTKEGKL-VAIEDTGGQTPHPGRGANFVHPTF 265
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 43.3 bits (100), Expect = 4e-05
Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG-LAFAIGVNSDSIKLYDVRSY 380
+I+ S + V D+ I + N A P+G + +S+ + + D +
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 381 DKGPFASFKCPGERGCEW 398
+ +
Sbjct: 65 NVIATVPAGSSPQGVAVS 82
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 42.2 bits (97), Expect = 8e-05
Identities = 29/265 (10%), Positives = 63/265 (23%), Gaps = 11/265 (4%)
Query: 225 NSLDYSSDGS-LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST 283
S DG+ + ++ + + + I D T+ + + K +
Sbjct: 35 MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA 94
Query: 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG 343
++ + + ++ +G +V + N
Sbjct: 95 SSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154
Query: 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKF 403
+ S D + A + + V + P G K
Sbjct: 155 SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKA 214
Query: 404 SPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFV-ASGSTDG 462
+T + D + P TPD + V + S
Sbjct: 215 YVTNVDKYFNTV----SMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFCN 266
Query: 463 QVHIWNAERGYKVCVLD-GDHPSAV 486
V + + + G +P A
Sbjct: 267 TVSVIDTATNTITATMAVGKNPYAS 291
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 38.3 bits (87), Expect = 0.002
Identities = 18/193 (9%), Positives = 42/193 (21%), Gaps = 50/193 (25%)
Query: 322 FISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYD 381
+I+ + + VW+L + + Q+ + +
Sbjct: 7 YIASPESQQIHVWNLNHEGALTLTQVVD----VPGQVQPMV------------------- 43
Query: 382 KGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS-IIRLFDAFNGNCVQSLSGVLNNN 440
SPD + + V + + + + +
Sbjct: 44 ---------------------VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 82
Query: 441 ASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLD-----GDHPSAVQSLQFNPKY 495
S + QFV GS + + D + N
Sbjct: 83 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTL 142
Query: 496 HMLASACSNMAFW 508
+ A + +
Sbjct: 143 WVPALKQDRICLF 155
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Score = 37.6 bits (87), Expect = 0.003
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 36/151 (23%)
Query: 229 YSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288
+ G+ + D Q+ K+ + + +V+
Sbjct: 319 FDGRGNAYTTLFIDSQVC-----------------------KWNIADAIKHYNGDRVNYI 355
Query: 289 LRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISG---SYDKTVRVWDLRQPNNVGMI 345
+ L + Y PGH + + + S D+ + V L P N +I
Sbjct: 356 RQKLDVQ------YQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPVGPL-HPENDQLI 408
Query: 346 QLSGNKPIAAYDPEGLA---FAIGVNSDSIK 373
+SG + +D A I V D IK
Sbjct: 409 DISGEEMKLVHDGPTYAEPHDCILVRRDQIK 439
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Score = 37.6 bits (87), Expect = 0.004
Identities = 35/244 (14%), Positives = 76/244 (31%), Gaps = 40/244 (16%)
Query: 223 KINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTIN--SKKYGVDLIKFTHSKTTAI 279
+++ D G +C + ++ + ++ + + + +K + KT
Sbjct: 177 NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD 236
Query: 280 HASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQ 338
VD ++++ RY P + LN SP +G TV V + +
Sbjct: 237 SKVPVVDGR------GESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289
Query: 339 PNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398
+++ ++ I A GL G + RG +
Sbjct: 290 LDDLFEDKIELRDTIVAEPELGL----GPLHTTFD-------------------GRGNAY 326
Query: 399 TGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNN---NASPLEATFTPDSQFV 455
T L + I+ ++ N ++ V N + L + D +++
Sbjct: 327 TTLFID---SQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWL 383
Query: 456 ASGS 459
S
Sbjct: 384 VVLS 387
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 515 | |||
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.96 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.95 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.95 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.95 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.94 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.94 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.92 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.92 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.91 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.9 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.89 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.87 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.87 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.86 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.85 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.84 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.82 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.7 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.67 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.65 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.58 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.58 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.55 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.34 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.33 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.32 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.3 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.28 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.24 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.24 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.21 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.17 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.13 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.11 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.11 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.07 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.06 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.05 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.02 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.75 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.74 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.64 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.54 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 98.49 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 98.48 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 98.15 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.95 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.94 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.9 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.87 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.86 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.85 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.83 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.79 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.78 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.74 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.48 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 97.36 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.33 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 97.11 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.09 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.07 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 97.02 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.96 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.94 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 96.44 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.11 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 95.8 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 95.74 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 94.62 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 94.24 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 93.6 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 93.22 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 93.1 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 91.46 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 82.71 | |
| d1wp5a_ | 323 | Topoisomerase IV subunit A, ParC, C-terminal domai | 81.35 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-42 Score=327.62 Aligned_cols=287 Identities=20% Similarity=0.349 Sum_probs=260.1
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
....+|+||+++|++++|+|++++||||+.||+|+|||+.+++.+.++.+|...|.+++|+|++..++... .++.+..
T Consensus 8 ~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~--~~~~~~~ 85 (317)
T d1vyhc1 8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS--ADMTIKL 85 (317)
T ss_dssp SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE--TTSCCCE
T ss_pred CccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccc--ccccccc
Confidence 34567999999999999999999999999999999999999999999999999999999999998877665 7999999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCC
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg 370 (515)
|+....+....+.+|...+.++.|+|+++.+++++.|+.+++||+++++....+. +...+.+++++|++.++++++.|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 165 (317)
T d1vyhc1 86 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 165 (317)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999888875 445688999999999999999999
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCC--------------------CEEEEEECCCcEEEEECCCCcee
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDG--------------------KLILVSTNGSIIRLFDAFNGNCV 430 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~--------------------~~l~~~s~dg~i~iwd~~~~~~~ 430 (515)
.+++|+.+... .......+...+..++|+|++ .++++++.|+.|++||+++++++
T Consensus 166 ~v~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 240 (317)
T d1vyhc1 166 TVRVWVVATKE-----CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 240 (317)
T ss_dssp CEEEEETTTCC-----EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEEeeccce-----eeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEE
Confidence 99999998754 333344667778888887753 47889999999999999999999
Q ss_pred EEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEE
Q psy6127 431 QSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFW 508 (515)
Q Consensus 431 ~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW 508 (515)
..+.+|.. .+.+++|+|++++|++|+.||.|++||+.+++++..+.+ |.++|++++|+|++++|++|+.| ++||
T Consensus 241 ~~~~~~~~---~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~V~~~~~s~~~~~l~s~s~Dg~i~iW 316 (317)
T d1vyhc1 241 MTLVGHDN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316 (317)
T ss_dssp EEEECCSS---CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC-CSSCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred EEEeCCCC---CEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCeEEEe
Confidence 99887554 499999999999999999999999999999999999988 99999999999999999999876 9999
Q ss_pred c
Q psy6127 509 I 509 (515)
Q Consensus 509 ~ 509 (515)
|
T Consensus 317 d 317 (317)
T d1vyhc1 317 E 317 (317)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-41 Score=325.36 Aligned_cols=286 Identities=14% Similarity=0.198 Sum_probs=246.4
Q ss_pred eeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-----eEecCCCCceeEEEEecCCCeEEEEEe
Q psy6127 209 RSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK-----NTINSKKYGVDLIKFTHSKTTAIHAST 283 (515)
Q Consensus 209 ~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~s~ 283 (515)
+..+.++++ +|...|++++|+|+|++||+|+ ||.|+|||+.++... .....|...|.+++|+|+++.+++++
T Consensus 40 ~~~~~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~- 116 (337)
T d1gxra_ 40 RHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG- 116 (337)
T ss_dssp SEEEEEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-
T ss_pred CCceEEEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEee-
Confidence 345666666 8999999999999999999997 899999999765332 23457889999999999999877664
Q ss_pred eCCCeEEEEECCCC--eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCC
Q psy6127 284 KVDATLRYLSLHDN--KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEG 360 (515)
Q Consensus 284 ~~d~~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~ 360 (515)
.|+.|++||+... +....+..|...+.+++|+|++..+++++.|+.|++||+++++...... +...+.+++|++++
T Consensus 117 -~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~ 195 (337)
T d1gxra_ 117 -EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp -SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred -ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7999999998744 5567788899999999999999999999999999999999998877764 45668999999999
Q ss_pred CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC
Q psy6127 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 361 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
..+++++.|+.+++||+++++ .+.. ..+...|.+++|+|+++++++++.|+.+++||+++++.... .. +.
T Consensus 196 ~~~~~~~~d~~v~i~d~~~~~-----~~~~-~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~---~~ 265 (337)
T d1gxra_ 196 TKLWTGGLDNTVRSWDLREGR-----QLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HL---HE 265 (337)
T ss_dssp SEEEEEETTSEEEEEETTTTE-----EEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE-CC---CS
T ss_pred cccccccccccccccccccce-----eecc-cccccceEEEEEcccccccceeccccccccccccccccccc-cc---cc
Confidence 999999999999999998754 2222 23567899999999999999999999999999998876543 22 44
Q ss_pred CCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 441 ASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
..|.+++|+|+|++|++|+.||.|++||+.+++++..+. |.+.|++++|+|++++|++++.| ++||++
T Consensus 266 ~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 266 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc--CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 559999999999999999999999999999999998876 78999999999999999999865 999986
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.8e-40 Score=323.61 Aligned_cols=291 Identities=21% Similarity=0.360 Sum_probs=241.7
Q ss_pred ccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec------------------CCCCceeEEEEecCCCeE
Q psy6127 217 FRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN------------------SKKYGVDLIKFTHSKTTA 278 (515)
Q Consensus 217 ~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~l 278 (515)
..+|++.|+|++|+|||++||+|+ |++|+|||+.+++.+..+. .|...|.+++|+|+++.+
T Consensus 58 ~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 136 (388)
T d1erja_ 58 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 136 (388)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred eCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcc
Confidence 347999999999999999999987 8999999999988877664 355669999999999987
Q ss_pred EEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECC
Q psy6127 279 IHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP 358 (515)
Q Consensus 279 ~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~ 358 (515)
++++ .|+.|++||...++.+..+.+|...|.++++++++..+++++.++.+++||.++...............+.+.+
T Consensus 137 ~s~~--~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
T d1erja_ 137 ATGA--EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP 214 (388)
T ss_dssp EEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred eecc--cccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccccC
Confidence 7665 79999999999999999999999999999999999999999999999999999998888877766666666655
Q ss_pred -CCCEEEEEECCCcEEEEEeecCCCCCce--eeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee-
Q psy6127 359 -EGLAFAIGVNSDSIKLYDVRSYDKGPFA--SFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS- 434 (515)
Q Consensus 359 -~~~~l~~g~~dg~i~i~d~~~~~~~~~~--~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~- 434 (515)
++++|++|+.||.|++||.++....... .......|...|.+++|+|++++|++++.|+.|++||++++.......
T Consensus 215 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 294 (388)
T d1erja_ 215 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 294 (388)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccccc
Confidence 7899999999999999999875421111 111234577889999999999999999999999999998765432211
Q ss_pred --------ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEE------CCCCCEEEE
Q psy6127 435 --------GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQF------NPKYHMLAS 500 (515)
Q Consensus 435 --------~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~------sp~~~~las 500 (515)
....+...+.+++|+|++++|++|+.||.|++||+.+++++..+.+ |.+.|+++++ +|++.+||+
T Consensus 295 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~-H~~~V~~~~~~~~~~~spd~~~l~s 373 (388)
T d1erja_ 295 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNVFAT 373 (388)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred ccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeC-CCCCEEEEEEecCcccCCCCCEEEE
Confidence 1222445689999999999999999999999999999999999998 9999999975 678999999
Q ss_pred eeCC--EEEEcCC
Q psy6127 501 ACSN--MAFWIPT 511 (515)
Q Consensus 501 ~~~d--v~iW~~~ 511 (515)
|+.| ++||+++
T Consensus 374 ~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 374 GSGDCKARIWKYK 386 (388)
T ss_dssp EETTSEEEEEEEE
T ss_pred EeCCCEEEEEeee
Confidence 9866 9999974
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.4e-38 Score=307.32 Aligned_cols=289 Identities=21% Similarity=0.328 Sum_probs=251.5
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.++.++|+||+++|++++|+|++++||||+.||+|+|||+.+++.+..+..|..+|.+++|+|++..+++++ .|+.+.
T Consensus 45 ~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~--~d~~i~ 122 (340)
T d1tbga_ 45 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG--LDNICS 122 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEE--TTCCEE
T ss_pred eeeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeec--ccceee
Confidence 345678999999999999999999999999999999999999999999999999999999999999887665 799999
Q ss_pred EEECCCC----eeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEE
Q psy6127 291 YLSLHDN----KYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 291 vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~ 365 (515)
+|+.... .....+.+|..........+ +..+.....|.....++.......... .....+....+.+.+..+++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (340)
T d1tbga_ 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EEESSSSCSCCCEEEEECCCSSCEEEEEEEE-TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred cccccccccccccceeccccccccccccccc-ccccccccccccccccccccccccccccccceeEeeeccccccceeEE
Confidence 9997654 34566778887777666654 567888889999999998877665554 44556788999999999999
Q ss_pred EECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 366 GVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 366 g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
|+.|+.+++||+++.. .......|...|++++|+|++++|++++.|+.|++||++.......+... .+...+.+
T Consensus 202 ~~~d~~v~i~d~~~~~-----~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~-~~~~~i~~ 275 (340)
T d1tbga_ 202 GACDASAKLWDVREGM-----CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD-NIICGITS 275 (340)
T ss_dssp EETTTEEEEEETTTTE-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCEEE
T ss_pred eecCceEEEEECCCCc-----EEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccc-cccCceEE
Confidence 9999999999998754 44445578889999999999999999999999999999998887766533 34455899
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 446 ATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 446 ~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
++|+|++++|++|+.||.|++||+.+++++..+.+ |.++|++++|+|++.+|++|+.| ++|||
T Consensus 276 ~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECSSSCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 99999999999999999999999999999999998 99999999999999999999865 99997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.1e-39 Score=313.06 Aligned_cols=267 Identities=18% Similarity=0.165 Sum_probs=228.4
Q ss_pred EEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEecCCCCceeEEEEecCCCe
Q psy6127 200 ITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTINSKKYGVDLIKFTHSKTT 277 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~ 277 (515)
.+.+|+ +...+..+.+.+|.+.|++++|+|+|++||+|+.||+|++||+.+++.. ..+..|..+|.+++|+|+++.
T Consensus 39 ~v~i~~--~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~ 116 (311)
T d1nr0a1 39 SVYTVP--VGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116 (311)
T ss_dssp EEEEEE--TTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred EEEEEE--CCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccc
Confidence 367888 7778888889999999999999999999999999999999999887644 557889999999999999999
Q ss_pred EEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEE
Q psy6127 278 AIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAA 355 (515)
Q Consensus 278 l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~ 355 (515)
+++++.+.+..+++|++++++....+.+|...|++++|+|+++ .|++|+.|+.|++||+++++....+. +...+.++.
T Consensus 117 l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~ 196 (311)
T d1nr0a1 117 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 196 (311)
T ss_dssp EEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccc
Confidence 9888766678899999999999999999999999999999988 58899999999999999998888774 456789999
Q ss_pred ECCCCCEEEEEECCCcEEEEEeecCCCCCceee--ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEe
Q psy6127 356 YDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASF--KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 356 ~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~ 433 (515)
++|+++++++++.|+.+++||.+.......... .....|...|++++|+|++++|++|+.||.|++||++++++++++
T Consensus 197 ~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l 276 (311)
T d1nr0a1 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 276 (311)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred cCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 999999999999999999999987542111011 112357788999999999999999999999999999999999998
Q ss_pred eccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 434 SGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 434 ~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
..+......+ +.+.+++..+++++.||.|++||.+
T Consensus 277 ~~~~~~~~~~--~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 277 PVGTRIEDQQ--LGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp ECCSSGGGCE--EEEEECSSCEEEEETTCCEEEEETT
T ss_pred ECCCCccceE--EEEEecCCEEEEEECCCEEEEEeCC
Confidence 8765443333 4455556789999999999999974
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-38 Score=308.06 Aligned_cols=288 Identities=19% Similarity=0.285 Sum_probs=245.4
Q ss_pred hccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeee-----EeeeeccccCCcEEEEEEcCCCCE
Q psy6127 161 LLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSY-----RVAKVFRENTDKINSLDYSSDGSL 235 (515)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~-----~~~~~~~~h~~~I~~l~~spd~~~ 235 (515)
..+++.++ +|...|.+++|.+.... ++ +++ ++.|++|| +... .......+|.+.|.+++|+||+++
T Consensus 41 ~~~~~~~~-~H~~~V~~v~fs~~g~~----la-tg~-dg~V~iWd--~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~ 111 (337)
T d1gxra_ 41 HARQINTL-NHGEVVCAVTISNPTRH----VY-TGG-KGCVKVWD--ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111 (337)
T ss_dssp EEEEEEEE-CCSSCCCEEEECSSSSE----EE-EEC-BSEEEEEE--TTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE
T ss_pred CceEEEEC-CCCCcEEEEEECCCCCE----EE-EEE-CCEEEEEE--ccCCcccceeEEeeecCCCCcEEEEEEcCCCCE
Confidence 44666666 56555677777655421 33 454 67899998 3222 122345689999999999999999
Q ss_pred EEEEeCCCeEEEEECCC--CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEE
Q psy6127 236 LISCSDDDQIIIYDCEQ--GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSL 313 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l 313 (515)
|++|+.||+|++||+.. ++....+..|...+.+++|+|++..+++++ .|+.+++||+.+++......+|...|.++
T Consensus 112 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~~~~~~~~~~~~~~~~~~~~v~~l 189 (337)
T d1gxra_ 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHTDGASCI 189 (337)
T ss_dssp EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEEeecccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence 99999999999999874 455677888999999999999998777654 79999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC
Q psy6127 314 NLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE 393 (515)
Q Consensus 314 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~ 393 (515)
+|++++..+++++.|+.+++||+++++.+..+.+...+.+++|+|+++.+++++.|+.+++||++..+ .. ....
T Consensus 190 ~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~~-~~~~ 263 (337)
T d1gxra_ 190 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-----KY-QLHL 263 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-----EE-EECC
T ss_pred cccccccccccccccccccccccccceeecccccccceEEEEEcccccccceeccccccccccccccc-----cc-cccc
Confidence 99999999999999999999999999999999888889999999999999999999999999998754 22 2346
Q ss_pred CCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 394 RGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 394 ~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
|...|++++|+|++++|++++.||.|++||+.+++.+..+. +...|.+++|+|++++|++|+.||+|+|||+
T Consensus 264 ~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc----CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 77889999999999999999999999999999999887765 3345999999999999999999999999996
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9.4e-39 Score=306.56 Aligned_cols=283 Identities=13% Similarity=0.196 Sum_probs=238.5
Q ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe
Q psy6127 219 ENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~ 298 (515)
.+.+.+..++++|+|+.||.++ ++.|.+||+.+++....+.+|...|++++|+|+++++++++ .||+|++||+.+++
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~--~dg~i~iwd~~~~~ 91 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD--VHGNVRIWDTTQTT 91 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEESSSTT
T ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccc--cCceEeeeeeeccc
Confidence 4556777899999999999986 56799999999999999999999999999999999876554 79999999998876
Q ss_pred ee--EEecCCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCE-EEEEECCCcE
Q psy6127 299 YV--RYFPGHVRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLA-FAIGVNSDSI 372 (515)
Q Consensus 299 ~~--~~~~~h~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~-l~~g~~dg~i 372 (515)
.. ..+.+|.++|.+++|+|+++++++++. +..+++|++++++....+. +...+.+++|+|++++ +++|+.|+.|
T Consensus 92 ~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i 171 (311)
T d1nr0a1 92 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV 171 (311)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred cccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence 43 557889999999999999999999986 4569999999998877764 4456899999999885 8889999999
Q ss_pred EEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc----cCCCCCEEEEE
Q psy6127 373 KLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL----NNNASPLEATF 448 (515)
Q Consensus 373 ~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~----~~~~~i~~~~~ 448 (515)
++||+++.+ .......|...|++++|+|+++++++++.|+.+++||..++.....+.... .|...|.+++|
T Consensus 172 ~i~d~~~~~-----~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~ 246 (311)
T d1nr0a1 172 AIFEGPPFK-----FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 246 (311)
T ss_dssp EEEETTTBE-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred ccccccccc-----cccccccccccccccccCcccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999998754 445556788899999999999999999999999999999998877765322 24566999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCC--CCeEEEEECCCCCEEEEee--CCEEEEcCC
Q psy6127 449 TPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHP--SAVQSLQFNPKYHMLASAC--SNMAFWIPT 511 (515)
Q Consensus 449 sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~--~~V~~l~~sp~~~~las~~--~dv~iW~~~ 511 (515)
+|++++|++|+.||.|+|||+.+++++..+...+. ..+.++.|+++ .+++++ +.+++||++
T Consensus 247 s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~--~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 247 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ--ALVSISANGFINFVNPE 311 (311)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS--CEEEEETTCCEEEEETT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCC--EEEEEECCCEEEEEeCC
Confidence 99999999999999999999999999999876222 34556666655 455555 569999985
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.3e-38 Score=303.03 Aligned_cols=290 Identities=17% Similarity=0.214 Sum_probs=232.5
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEec-CCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTIN-SKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
++..++++||+++|++++|+||+++||||+.||+|++||+++++....+. .|...|.+++|+|++.. +++ +.|+.+
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~--~~d~~v 78 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTV--SWDDHL 78 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEE--ETTTEE
T ss_pred CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecccee-ecc--cceeeE
Confidence 45678899999999999999999999999999999999999999888874 68899999999999864 333 369999
Q ss_pred EEEECCCCee---eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE
Q psy6127 290 RYLSLHDNKY---VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG 366 (515)
Q Consensus 290 ~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 366 (515)
++|+...... ......+...+.+++|+|+++.+++++ ++.+++|+... ...........+++|+|+++++++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g 154 (299)
T d1nr0a2 79 KVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK---LTEVPISYNSSCVALSNDKQFVAVG 154 (299)
T ss_dssp EEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE---EEEEECSSCEEEEEECTTSCEEEEE
T ss_pred EEeccCCccccccccccccccccccccccccccccccccc-ccccccccccc---ccccccccccccccccccccccccc
Confidence 9999865432 122345778899999999998776655 57899998542 3334455568899999999999999
Q ss_pred ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEE
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEA 446 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 446 (515)
+.||.+++||+++.... ......|...|++++|+|+++++++++.|+.|++||+.++...........+...|.++
T Consensus 155 ~~dg~i~~~d~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l 230 (299)
T d1nr0a2 155 GQDSKVHVYKLSGASVS----EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV 230 (299)
T ss_dssp ETTSEEEEEEEETTEEE----EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEE
T ss_pred ccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999875321 11123466789999999999999999999999999999887776665555566779999
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCeEE--EEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 447 TFTPDSQFVASGSTDGQVHIWNAERGYKV--CVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 447 ~~sp~g~~l~sgs~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
+|+|++++|++|+.||.|++||+.++... ......+...|.++.| +++.+|++++.| +++|+++.
T Consensus 231 ~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~~ 299 (299)
T d1nr0a2 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVPF 299 (299)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECCC
T ss_pred cccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEeccC
Confidence 99999999999999999999999876432 3333324456777765 556788888755 99999863
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-37 Score=296.42 Aligned_cols=291 Identities=21% Similarity=0.305 Sum_probs=258.3
Q ss_pred hccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe
Q psy6127 161 LLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS 240 (515)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs 240 (515)
...+..+|+||...|.++.|.+... +.++++.|+.|++|| +.+++++.++++|.+.|.+++|+|++.++++++
T Consensus 6 ~~~~~~~L~GH~~~I~~l~~sp~~~-----~l~s~s~Dg~i~iWd--~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~ 78 (317)
T d1vyhc1 6 RPPEKYALSGHRSPVTRVIFHPVFS-----VMVSASEDATIKVWD--YETGDFERTLKGHTDSVQDISFDHSGKLLASCS 78 (317)
T ss_dssp CSSCSCEEECCSSCEEEEEECSSSS-----EEEEEESSSCEEEEE--TTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCccEEEcCCCCCeEEEEEcCCCC-----EEEEEeCCCeEEEEE--CCCCCEEEEEeCCCCcEEEEeeecccccccccc
Confidence 3455668899988888888877543 344788899999999 788999999999999999999999999999999
Q ss_pred CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC
Q psy6127 241 DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD 320 (515)
Q Consensus 241 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 320 (515)
.++.+.+|+....+....+..|...+.++.|+|+++.+++++ .|+.+++||+++++....+.+|...+.+++|+|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (317)
T d1vyhc1 79 ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS--RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 156 (317)
T ss_dssp TTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred cccccccccccccccccccccccccceeeeccCCCceEEeec--cCcceeEeecccceeeeEEccCCCcceeeecccCCC
Confidence 999999999999998888999999999999999999887665 799999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCC--------------------CCEEEEEECCCcEEEEEeec
Q psy6127 321 SFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPE--------------------GLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 321 ~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~--------------------~~~l~~g~~dg~i~i~d~~~ 379 (515)
+|++++.|+.|++|+..+++....+. +...+..+.++|+ +..+++++.|+.|++||+++
T Consensus 157 ~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 236 (317)
T d1vyhc1 157 LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 236 (317)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred EEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCC
Confidence 99999999999999999999888774 4455777777764 45789999999999999987
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
+. .......|...|.+++|+|++++|++++.||.|++||+.+++++..+.+|.. .|++++|+|++++|++|+
T Consensus 237 ~~-----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~---~V~~~~~s~~~~~l~s~s 308 (317)
T d1vyhc1 237 GM-----CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH---FVTSLDFHKTAPYVVTGS 308 (317)
T ss_dssp TE-----EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS---CEEEEEECSSSSCEEEEE
T ss_pred Cc-----EEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEe
Confidence 54 3444456788999999999999999999999999999999999999987654 499999999999999999
Q ss_pred CCCcEEEEE
Q psy6127 460 TDGQVHIWN 468 (515)
Q Consensus 460 ~dg~I~iwd 468 (515)
.||+|+|||
T Consensus 309 ~Dg~i~iWd 317 (317)
T d1vyhc1 309 VDQTVKVWE 317 (317)
T ss_dssp TTSEEEEEC
T ss_pred CCCeEEEeC
Confidence 999999997
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.5e-37 Score=302.38 Aligned_cols=286 Identities=15% Similarity=0.204 Sum_probs=230.5
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGT--SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN 297 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~ 297 (515)
+.++|+|++|+|||++||+|+.||.|+|||..+++ .+..+++|..+|.+++|+|+++++++++ .|++|++||+.++
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s--~D~~i~vWd~~~~ 83 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG--TDRNAYVWTLKGR 83 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE--TTSCEEEEEEETT
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEE--CCCeEEEEeeccc
Confidence 35789999999999999999999999999998775 5677899999999999999999877654 7999999999877
Q ss_pred ee--eEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-----ecCCCeeEEEECCCCCEEEEEECCC
Q psy6127 298 KY--VRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-----QLSGNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 298 ~~--~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~~~~~~~s~~~~~l~~g~~dg 370 (515)
.. ...+.+|...|.+++|+|+++.|++++.|+++++|++......... .+...+.+++|+|++++|++|+.|+
T Consensus 84 ~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~ 163 (371)
T d1k8kc_ 84 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163 (371)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCc
Confidence 64 4456789999999999999999999999999999998876644332 2345688999999999999999999
Q ss_pred cEEEEEeecCCCCC-------------ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 371 SIKLYDVRSYDKGP-------------FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 371 ~i~i~d~~~~~~~~-------------~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
++++||........ .........|...+.+++|+|+++++++++.|+.|++||+.+++.+..+..+.
T Consensus 164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 243 (371)
T d1k8kc_ 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243 (371)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeeccc
Confidence 99999987543111 11223345677889999999999999999999999999999999988887654
Q ss_pred cCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC--CCCeEEEE--------------------------------------
Q psy6127 438 NNNASPLEATFTPDSQFVASGSTDGQVHIWNA--ERGYKVCV-------------------------------------- 477 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~--~~~~~~~~-------------------------------------- 477 (515)
.+|.+++|+|++++|++|. |+.+++|.. ..+.....
T Consensus 244 ---~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (371)
T d1k8kc_ 244 ---LPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 319 (371)
T ss_dssp ---CCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred ---ccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccce
Confidence 4499999999998888765 676666543 32221110
Q ss_pred EcCCCCCCeEEEEECCCC----CEEEEeeCC--EEEEcCC
Q psy6127 478 LDGDHPSAVQSLQFNPKY----HMLASACSN--MAFWIPT 511 (515)
Q Consensus 478 ~~~~h~~~V~~l~~sp~~----~~las~~~d--v~iW~~~ 511 (515)
+...|.+.|+++++.|.+ ..++|++.| ++||+++
T Consensus 320 ~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~ 359 (371)
T d1k8kc_ 320 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359 (371)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCC
Confidence 011288899999998744 358888765 9999974
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-36 Score=289.92 Aligned_cols=330 Identities=19% Similarity=0.307 Sum_probs=268.7
Q ss_pred cchhhccccccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCE
Q psy6127 157 WDFELLHSLSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSL 235 (515)
Q Consensus 157 wd~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~ 235 (515)
|+....+...+++||.. ++.+++++++. |+ +++.|+.|++|| +.++++++++.+|.+.|.+++|+|+ +
T Consensus 1 W~~~~~~~~~~l~GH~~~V~s~~~~~g~~------l~-sgs~Dg~i~vWd--~~~~~~~~~~~~h~~~V~~v~~~~~--~ 69 (342)
T d2ovrb2 1 WRRGELKSPKVLKGHDDHVITCLQFCGNR------IV-SGSDDNTLKVWS--AVTGKCLRTLVGHTGGVWSSQMRDN--I 69 (342)
T ss_dssp HHHSCCCCCEEEECSTTSCEEEEEEETTE------EE-EEETTSCEEEEE--TTTCCEEEECCCCSSCEEEEEEETT--E
T ss_pred CCCCCCCcCEEECCcCCceEEEEEECCCE------EE-EEeCCCeEEEEE--CCCCCEEEEEeCCCCCEEEEEeCCC--c
Confidence 77778888889999965 45577887664 43 788899999999 8889999999999999999999975 9
Q ss_pred EEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEE
Q psy6127 236 LISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNL 315 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~ 315 (515)
|++|+.|+++++|+............+...+......+. ....+ ..|+.+.+|+..+++....+..+...... .
T Consensus 70 l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~d~~i~~~~~~~~~~~~~~~~~~~~~~~--~ 143 (342)
T d2ovrb2 70 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSG--SRDATLRVWDIETGQCLHVLMGHVAAVRC--V 143 (342)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT--EEEEE--ETTSEEEEEESSSCCEEEEEECCSSCEEE--E
T ss_pred cccceecccccccccccccceecccccceeEeeeecccc--ccccc--ccceeEEEeecccccceeeeeccccccee--e
Confidence 999999999999999988887777777766666655543 33433 47999999999999888777655554443 3
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCC
Q psy6127 316 SPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 316 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
.+....+++++.|+.|++||.+..+.+..+..+. .....+++++..+++++.||.|++||++..+ .......|.
T Consensus 144 ~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~-----~~~~~~~~~ 217 (342)
T d2ovrb2 144 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT-NRVYSLQFDGIHVVSGSLDTSIRVWDVETGN-----CIHTLTGHQ 217 (342)
T ss_dssp EECSSCEEEEETTSCEEEEEGGGTEEEEEECCCS-SCEEEEEECSSEEEEEETTSCEEEEETTTCC-----EEEEECCCC
T ss_pred ccccceeeeecCCCeEEEeecccceeeEEEcCcc-cccccccCCCCEEEEEeCCCeEEEeecccce-----eeeEecccc
Confidence 4456789999999999999999998888775543 5566677789999999999999999998764 444455677
Q ss_pred cCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKV 475 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~ 475 (515)
..+.++++++ +++++++.|+.|++||+...+....+..+..+...+.++.+ +++++++|+.||.|++||+++++++
T Consensus 218 ~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i 293 (342)
T d2ovrb2 218 SLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFI 293 (342)
T ss_dssp SCEEEEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEE
T ss_pred cceeEEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEE
Confidence 7888777754 59999999999999999999988888877776665666555 5679999999999999999999998
Q ss_pred EEEcC----CCCCCeEEEEECCCCCEEEEeeCC------EEEEcCCCC
Q psy6127 476 CVLDG----DHPSAVQSLQFNPKYHMLASACSN------MAFWIPTLS 513 (515)
Q Consensus 476 ~~~~~----~h~~~V~~l~~sp~~~~las~~~d------v~iW~~~~~ 513 (515)
..+.. .|.+.|++++|+|++.++|+|+.+ +++||++.+
T Consensus 294 ~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~~ 341 (342)
T d2ovrb2 294 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 341 (342)
T ss_dssp EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCCC
Confidence 87742 377889999999999999998744 678887753
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.5e-36 Score=288.63 Aligned_cols=321 Identities=19% Similarity=0.217 Sum_probs=246.3
Q ss_pred cccccCCce-eEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC
Q psy6127 165 LSSLESPHF-VSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD 243 (515)
Q Consensus 165 l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg 243 (515)
..+++||.. ++.+++|+++. + ++++.|+.|++|| ..++++++++++|.++|++++|+|+ .+|++|+.|+
T Consensus 5 ~~tL~GH~~~vitc~~~~~~~------l-~tgs~Dg~i~vWd--~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~ 74 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQFEDNY------V-ITGADDKMIRVYD--SINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDR 74 (355)
T ss_dssp EEEEECCSSSCEEEEEEETTE------E-EEEETTTEEEEEE--TTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTC
T ss_pred cEEECCcCCCcEEEEEECCCE------E-EEEeCCCeEEEEE--CCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccc
Confidence 457889955 56678887653 4 4788899999999 7889999999999999999999986 5899999999
Q ss_pred eEEEEECCCCeeeeEecCCCCc--eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE-------------------
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYG--VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY------------------- 302 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~------------------- 302 (515)
+|++|+....+........... .....+.+++..++.+ +.|+.|++||+.+......
T Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (355)
T d1nexb2 75 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG--SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 152 (355)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEE--ETTSEEEEEECCC-----------CCCEEESCTTTCTT
T ss_pred ccccccccccccccccccccccccccccccccccceeeee--cCCCcEEEEEccCCceeccccccceeccceeccccccc
Confidence 9999999998887766655444 3445566666555544 4899999999987654322
Q ss_pred ----ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEe
Q psy6127 303 ----FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDV 377 (515)
Q Consensus 303 ----~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~ 377 (515)
...|...+. .+.++++.++++..|+.|++||+++++.+.... ......++.++|++..+++++.|+.|++||+
T Consensus 153 ~~~~~~~~~~~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~ 230 (355)
T d1nexb2 153 FVGVLRGHMASVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 230 (355)
T ss_dssp EEEEEECCSSCEE--EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eeeeeeecccccc--ccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeec
Confidence 122333443 345568899999999999999999998887774 4456788999999999999999999999999
Q ss_pred ecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 378 RSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
+++. .......|...|.+++++| +++++++.||.|++||++++..... .|.... .....++++++++++
T Consensus 231 ~~~~-----~~~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~~ 299 (355)
T d1nexb2 231 ENGE-----LMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFS--YHHTNL--SAITTFYVSDNILVS 299 (355)
T ss_dssp TTCC-----EEEEECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEEE--EECTTC--CCCCEEEECSSEEEE
T ss_pred cccc-----ccccccccccccccccccc--ceeeeeecccccccccccccceecc--cccCCc--eEEEEEcCCCCEEEE
Confidence 8765 4444567888899999865 6999999999999999998875433 333332 223456778887777
Q ss_pred EeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCC
Q psy6127 458 GSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTL 512 (515)
Q Consensus 458 gs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~ 512 (515)
|+ ||.|++||+++++++......|.++|++++|+|+ .++++++.| +.||.++.
T Consensus 300 g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~df 354 (355)
T d1nexb2 300 GS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEILDF 354 (355)
T ss_dssp EE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEEEC
T ss_pred Ee-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEEeC
Confidence 65 8999999999999886543349999999999997 466666654 66776654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.5e-36 Score=296.76 Aligned_cols=303 Identities=18% Similarity=0.197 Sum_probs=239.8
Q ss_pred CCcchhhccc----cccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeec-------------
Q psy6127 155 GSWDFELLHS----LSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVF------------- 217 (515)
Q Consensus 155 ~~wd~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~------------- 217 (515)
.+|+....+. +....+|...|.+++|.+... . |+ +++ |+.|++|+ +..++++..+
T Consensus 41 ~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~-~---la-sg~-d~~i~iW~--~~~~~~~~~~~~~~~~~~~~~~~ 112 (388)
T d1erja_ 41 ILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGE-Y---LA-TGC-NKTTQVYR--VSDGSLVARLSDDSAANKDPENL 112 (388)
T ss_dssp EEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSS-E---EE-EEC-BSCEEEEE--TTTCCEEEEECC-----------
T ss_pred EEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCC-E---EE-EEe-CCeEEEEE--ecccceEeeeccccccccccccc
Confidence 6677554332 222235766677777766432 1 43 454 66899998 5555555444
Q ss_pred -----cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 218 -----RENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 218 -----~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
.+|...|++++|+|++++|++|+.||.|++||..+++....+.+|...|.+++|++++..++.++ .++.+++|
T Consensus 113 ~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~--~~~~i~~~ 190 (388)
T d1erja_ 113 NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS--GDRTVRIW 190 (388)
T ss_dssp ------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEE
T ss_pred ccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccc--cceeeeee
Confidence 35777899999999999999999999999999999999999999999999999999998877665 79999999
Q ss_pred ECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe--------cCCCeeEEEECCCCCEEE
Q psy6127 293 SLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ--------LSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 293 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--------~~~~~~~~~~s~~~~~l~ 364 (515)
|..+.........+...+....+.+++++|++|+.|+.|++||.+++.....+. +...+.+++|+|++++|+
T Consensus 191 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~ 270 (388)
T d1erja_ 191 DLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270 (388)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE
T ss_pred eccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEE
Confidence 999998888777666555555555578899999999999999999998877652 345688999999999999
Q ss_pred EEECCCcEEEEEeecCCCCCc-------eeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPF-------ASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~-------~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
+++.||.|++||++....... ........|...|.+++|+|++++|++|+.||.|++||+++++++..+.+|.
T Consensus 271 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~ 350 (388)
T d1erja_ 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR 350 (388)
T ss_dssp EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCC
Confidence 999999999999987542211 1122234567789999999999999999999999999999999999998865
Q ss_pred cCCCCCEEEEE------ecCCCEEEEEeCCCcEEEEECC
Q psy6127 438 NNNASPLEATF------TPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 438 ~~~~~i~~~~~------sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
.. |.++++ +|++++|++|+.||+|+||+++
T Consensus 351 ~~---V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 351 NS---VISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp SC---EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CC---EEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 54 888764 6789999999999999999974
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.1e-34 Score=279.63 Aligned_cols=291 Identities=20% Similarity=0.280 Sum_probs=247.9
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
.+..++|+||...|.+++|.+... +.++++.|+.|++|| ..+++.+..+.+|..+|.+++|+|+++++++|+.
T Consensus 45 ~~~~~tL~GH~~~I~~l~~s~~~~-----~l~sgs~Dg~v~iWd--~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~ 117 (340)
T d1tbga_ 45 MRTRRTLRGHLAKIYAMHWGTDSR-----LLVSASQDGKLIIWD--SYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 117 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSS-----EEEEEETTTEEEEEE--TTTTEEEEEEECSCSCEEEEEECTTSSEEEEEET
T ss_pred eeeeEEECCCCCCEEEEEECCCCC-----EEEEEECCCceeeee--cccceeEEEEecccccEEeeEeeccceeeeeecc
Confidence 345668899988888888887543 334788999999999 7888999999999999999999999999999999
Q ss_pred CCeEEEEECCCC----eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC
Q psy6127 242 DDQIIIYDCEQG----TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 242 dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 317 (515)
|+.+++|+.... .....+.+|...........+. .+... ..+.....++............+...+....+.+
T Consensus 118 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (340)
T d1tbga_ 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTS--SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp TCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETT-EEEEE--ETTTEEEEEETTTTEEEEEEECCSSCEEEEEECT
T ss_pred cceeecccccccccccccceeccccccccccccccccc-ccccc--cccccccccccccccccccccccceeEeeecccc
Confidence 999999997654 3455677777766666665554 33333 3699999999998888888888899999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
.+..+++|+.|+.|++||+++++.+..+. +...+.+++|+|++++|++|+.||.+++||++.... ........+..
T Consensus 195 ~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~---~~~~~~~~~~~ 271 (340)
T d1tbga_ 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE---LMTYSHDNIIC 271 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---EEEECCTTCCS
T ss_pred ccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccc---ccccccccccC
Confidence 99999999999999999999999988884 456789999999999999999999999999986441 11122345667
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 397 EWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 397 ~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
.+.+++|+|++++|++|+.||.|++||+.+++++..+.+|.. +|++++|+|++++|++|+.||.|+|||
T Consensus 272 ~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~---~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN---RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCC---CEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 899999999999999999999999999999999999987654 499999999999999999999999997
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.9e-34 Score=271.88 Aligned_cols=291 Identities=13% Similarity=0.075 Sum_probs=228.2
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeecc-ccCCcEEEEEEcCCCCEEEEEe
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFR-ENTDKINSLDYSSDGSLLISCS 240 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~-~h~~~I~~l~~spd~~~lasgs 240 (515)
|+..+++.||...|.+++|.+... +.++++.|+.+++|| ++++++.+.+. +|...|++++|+|++++ ++++
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~-----~l~s~s~Dg~v~vWd--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~ 73 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGK-----TLFSADAEGHINSWD--ISTGISNRVFPDVHATMITGIKTTSKGDL-FTVS 73 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEE--TTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEE
T ss_pred CccceEcCCCCCCcEEEEECCCCC-----EEEEEcCCCeEEEEE--CCCCcEEEEEcCCCCCcEEEEEeecccee-eccc
Confidence 556678899988888888876543 334788899999999 77888888874 79999999999999975 5567
Q ss_pred CCCeEEEEECCCCee---eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcC
Q psy6127 241 DDDQIIIYDCEQGTS---KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSP 317 (515)
Q Consensus 241 ~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 317 (515)
.|+.+++|+...... ......+...+.+++|+|++..++..+ ++.+++|+.. +..... ....+.+++|+|
T Consensus 74 ~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~---~~~i~~~~~~--~~~~~~--~~~~~~~~~~s~ 146 (299)
T d1nr0a2 74 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC---YKHIAIYSHG--KLTEVP--ISYNSSCVALSN 146 (299)
T ss_dssp TTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE---SSEEEEEETT--EEEEEE--CSSCEEEEEECT
T ss_pred ceeeEEEeccCCccccccccccccccccccccccccccccccccc---cccccccccc--cccccc--cccccccccccc
Confidence 799999999865322 222345667899999999998766554 7899999854 333333 334578999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCeEE--EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCC
Q psy6127 318 VDDSFISGSYDKTVRVWDLRQPNNVG--MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERG 395 (515)
Q Consensus 318 ~~~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 395 (515)
+++++++|+.|+.|++||+++++... ...+...+.+++|+|+++++++++.++.|++||+.+... .........|.
T Consensus 147 ~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~--~~~~~~~~~h~ 224 (299)
T d1nr0a2 147 DKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE--LAHTNSWTFHT 224 (299)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE--ESCCCCCCCCS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccc
Confidence 99999999999999999998876544 345667799999999999999999999999999987541 11223345678
Q ss_pred cCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy6127 396 CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAE 470 (515)
Q Consensus 396 ~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~ 470 (515)
..|++++|+|++++|++|+.||.|++||++++...........+...+.++ +++++++|++|+.||.|++||+.
T Consensus 225 ~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 225 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSV-IWLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEE-EEEETTEEEEEETTSCEEEEECC
T ss_pred cccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEE-EECCCCEEEEEeCCCEEEEEecc
Confidence 899999999999999999999999999999876655444433344445555 45667899999999999999984
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.4e-34 Score=275.56 Aligned_cols=284 Identities=12% Similarity=0.140 Sum_probs=223.1
Q ss_pred EEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeecccc-CCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCC
Q psy6127 176 LFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFREN-TDKINSLDYSS--DGSLLISCSDDDQIIIYDCEQ 252 (515)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h-~~~I~~l~~sp--d~~~lasgs~dg~i~iwd~~~ 252 (515)
.++++.+.... +++..++...++.|+...........+.+| ...|++++|+| ++++||+|+.||+|+|||+..
T Consensus 21 t~l~~~~~~~~----la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~ 96 (325)
T d1pgua1 21 THLSYDPTTNA----IAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 96 (325)
T ss_dssp CCCEEETTTTE----EEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred EEEEECCCCCE----EEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecC
Confidence 34455544322 444445555678888655556667778888 46899999998 678999999999999999876
Q ss_pred Ceee--------eEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCC-EEE
Q psy6127 253 GTSK--------NTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDD-SFI 323 (515)
Q Consensus 253 ~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~ 323 (515)
++.. ..+..|.++|.+++|++++..+++++++.++.+.+|+.++++.+..+.+|...|.+++|+|+++ .++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 176 (325)
T d1pgua1 97 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSM 176 (325)
T ss_dssp EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEE
T ss_pred CcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEE
Confidence 5432 2345688899999999999999988877789999999999999999999999999999999987 477
Q ss_pred EEeCCCcEEEEEcCCCCeEEEEe----cCCCeeEEEECCC-CCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCe
Q psy6127 324 SGSYDKTVRVWDLRQPNNVGMIQ----LSGNKPIAAYDPE-GLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398 (515)
Q Consensus 324 s~s~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (515)
+++.|+.+++||....+...... +...+.+++|+|+ +.++++++.|+.|++||+++++ .......|..++
T Consensus 177 ~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~-----~~~~l~~~~~~v 251 (325)
T d1pgua1 177 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE-----FLKYIEDDQEPV 251 (325)
T ss_dssp EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC-----EEEECCBTTBCC
T ss_pred EeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccc-----cccccccccccc
Confidence 89999999999999887766652 2345889999996 6889999999999999998765 333344455555
Q ss_pred EEEEEc---CCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC-CCEEEEEeCCCcEEEEEC
Q psy6127 399 TGLKFS---PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD-SQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 399 ~~l~~s---p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~-g~~l~sgs~dg~I~iwd~ 469 (515)
.++.|+ |++++|++++.|+.|++||++++++++.+..+.... .+..+++.+. +.+|++++.||.|++||+
T Consensus 252 ~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 252 QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL-GNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp CSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG-GGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcc-cCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 444444 688999999999999999999999998887655332 2334444432 347899999999999996
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5e-33 Score=268.98 Aligned_cols=282 Identities=17% Similarity=0.274 Sum_probs=222.8
Q ss_pred eeeccccCCcE-EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 214 AKVFRENTDKI-NSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 214 ~~~~~~h~~~I-~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
..+|+||.+.| +|++| ++++||||+.||+|+|||+.+++++.++.+|..+|.+++|+|++ .++ +++.|+.|++|
T Consensus 5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~--s~s~D~~i~iw 79 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILV--SGSTDRTVRVW 79 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEE--EEETTCCEEEE
T ss_pred cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCC-EEE--EEecccccccc
Confidence 35789998886 56655 67899999999999999999999999999999999999999864 444 44589999999
Q ss_pred ECCCCeeeEEecCCC--CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec----------------------C
Q psy6127 293 SLHDNKYVRYFPGHV--RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL----------------------S 348 (515)
Q Consensus 293 d~~~~~~~~~~~~h~--~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----------------------~ 348 (515)
+....+.......+. .......+.+++..+++++.|+.|++||+++......... .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (355)
T d1nexb2 80 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 159 (355)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred cccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence 999998876665443 3455667788899999999999999999987654433211 1
Q ss_pred CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy6127 349 GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGN 428 (515)
Q Consensus 349 ~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~ 428 (515)
.......+.++++.++++..|+.+++||+++.+ .......+...+.++.|+|+++++++++.|+.|++||.+++.
T Consensus 160 ~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~ 234 (355)
T d1nexb2 160 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK-----CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 234 (355)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCC
T ss_pred ccccccccccccceeeeecccceeeeeeccccc-----ceeeeeccccccccccccccceeeecccccceEEeeeccccc
Confidence 112234566788999999999999999998754 444445666778899999999999999999999999999999
Q ss_pred eeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEE-EECCCCCEEEEeeC-CEE
Q psy6127 429 CVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSL-QFNPKYHMLASACS-NMA 506 (515)
Q Consensus 429 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l-~~sp~~~~las~~~-dv~ 506 (515)
.+..+.+|.. .|.+++++ +++|++|+.||.|++||+.++...... |...+.++ .+++++.++++++. .++
T Consensus 235 ~~~~~~~h~~---~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~d~~i~ 306 (355)
T d1nexb2 235 LMYTLQGHTA---LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY---HHTNLSAITTFYVSDNILVSGSENQFN 306 (355)
T ss_dssp EEEEECCCSS---CCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEEE---ECTTCCCCCEEEECSSEEEEEETTEEE
T ss_pred cccccccccc---cccccccc--cceeeeeecccccccccccccceeccc---ccCCceEEEEEcCCCCEEEEEeCCEEE
Confidence 9998887554 48888886 579999999999999999988766554 44455554 56778888888764 499
Q ss_pred EEcCCCC
Q psy6127 507 FWIPTLS 513 (515)
Q Consensus 507 iW~~~~~ 513 (515)
+||++.+
T Consensus 307 vwd~~tg 313 (355)
T d1nexb2 307 IYNLRSG 313 (355)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998754
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.4e-33 Score=275.56 Aligned_cols=246 Identities=14% Similarity=0.177 Sum_probs=204.8
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe--eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK--YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPN 340 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~ 340 (515)
..+|+|++|+|+++.+++++ .|+.|++||.++++ .+..+.+|.++|.+++|+|++++|++|+.|++|++||++++.
T Consensus 7 ~~pIt~~~~s~dg~~la~~~--~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~ 84 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 84 (371)
T ss_dssp SSCCCEEEECTTSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred CCCeEEEEECCCCCEEEEEe--CCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccc
Confidence 47899999999999887664 79999999998775 567789999999999999999999999999999999999877
Q ss_pred eEEEE---ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC
Q psy6127 341 NVGMI---QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS 417 (515)
Q Consensus 341 ~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg 417 (515)
....+ .+...+.+++|+|+++.+++++.|+++++|++....... ........+...|.+++|+|++++|++|+.|+
T Consensus 85 ~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~ 163 (371)
T d1k8kc_ 85 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW-VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163 (371)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE-EEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cccccccccccccccccccccccccceeecccCcceeeeeecccccc-cccccccccccccccccccccccceeccccCc
Confidence 65554 345569999999999999999999999999998754321 22233556788999999999999999999999
Q ss_pred cEEEEECCCCceeE---------------EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCC
Q psy6127 418 IIRLFDAFNGNCVQ---------------SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDH 482 (515)
Q Consensus 418 ~i~iwd~~~~~~~~---------------~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h 482 (515)
.+++||........ .+.....+...+.+++|+|+|++|++++.||.|++||+.+++.+..+.. |
T Consensus 164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~ 242 (371)
T d1k8kc_ 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-E 242 (371)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-S
T ss_pred EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec-c
Confidence 99999986532110 1111223445589999999999999999999999999999999999988 9
Q ss_pred CCCeEEEEECCCCCEEEEeeCC-EEEEcCCC
Q psy6127 483 PSAVQSLQFNPKYHMLASACSN-MAFWIPTL 512 (515)
Q Consensus 483 ~~~V~~l~~sp~~~~las~~~d-v~iW~~~~ 512 (515)
..+|++++|+|++.++++|..+ +++|.++.
T Consensus 243 ~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 243 TLPLLAVTFITESSLVAAGHDCFPVLFTYDS 273 (371)
T ss_dssp SCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred cccceeeeecCCCCEEEEEcCCceEEEEeeC
Confidence 9999999999999999987643 67776543
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8e-33 Score=261.25 Aligned_cols=270 Identities=16% Similarity=0.187 Sum_probs=214.9
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+++++++||.++|++++|+| |+||+.||+|++||+.++ ...|...|.++++++++. ++. ++.|++++
T Consensus 3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~~~-~~s--~s~D~~v~ 70 (287)
T d1pgua2 3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQE-YSS--ISWDDTLK 70 (287)
T ss_dssp EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCSTTC-CEE--EETTTEEE
T ss_pred cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecCCCe-EEE--Eeeccccc
Confidence 578899999999999999987 999999999999998754 357899999999987654 333 35899999
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCC
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD 370 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 370 (515)
+|++...+ ....+..+++++++..+++ +.++.+.+|+..+++.+..+..... ..+++|++..+++++.++
T Consensus 71 ~w~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~ 140 (287)
T d1pgua2 71 VNGITKHE-------FGSQPKVASANNDGFTAVL-TNDDDLLILQSFTGDIIKSVRLNSP--GSAVSLSQNYVAVGLEEG 140 (287)
T ss_dssp ETTEEEEE-------CSSCEEEEEECSSSEEEEE-ETTSEEEEEETTTCCEEEEEECSSC--EEEEEECSSEEEEEETTT
T ss_pred cccccccc-------cccceeeeeeccCCceEEE-eecccceeeeccceeeeeeccccce--eeeeeccCcceeeecccc
Confidence 99975432 3345778899988776665 4567789999999999888876654 456777888888888775
Q ss_pred -cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 371 -SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 371 -~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
.+++|++.... ........+...+++++|+|++.+|++|+.||.|++||+.+++...... ..+...|.+++|+
T Consensus 141 ~~v~~~~~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~--~~h~~~v~~~~~~ 214 (287)
T d1pgua2 141 NTIQVFKLSDLE----VSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRW--AFRTSKINAISWK 214 (287)
T ss_dssp SCEEEEETTEEE----EEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCS--CCCSSCEEEEEEC
T ss_pred ceeeeeeccccc----eeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccc--cccccccceeeec
Confidence 79999986533 1333345677789999999999999999999999999999887654321 2244559999998
Q ss_pred cC----------CCEEEEEeCCCcEEEEECCC-CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcC
Q psy6127 450 PD----------SQFVASGSTDGQVHIWNAER-GYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIP 510 (515)
Q Consensus 450 p~----------g~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~ 510 (515)
|+ +.++++|+.|+.|++||+++ ++.+..+.+ |.+.|++++|+|++. +++++.| +++|++
T Consensus 215 p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~-h~~~V~~v~~~~~~~-l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 215 PAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPST-LVSSGADACIKRWNV 286 (287)
T ss_dssp CCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS-STTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred ccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCC-CCCCeEEEEECCCCE-EEEEECCCeEEEEEE
Confidence 75 46899999999999999977 455666665 999999999999875 6666644 999985
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-31 Score=255.15 Aligned_cols=284 Identities=22% Similarity=0.373 Sum_probs=229.6
Q ss_pred eeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC
Q psy6127 208 VRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA 287 (515)
Q Consensus 208 ~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~ 287 (515)
...+++.++++||++.|.+ +++++|++|||||.||+|+|||+.+++++.++.+|...|.+++|+|+ .++ +++.|+
T Consensus 3 ~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~--s~s~D~ 77 (342)
T d2ovrb2 3 RGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--III--SGSTDR 77 (342)
T ss_dssp HSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEE--EEETTS
T ss_pred CCCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccc--cceecc
Confidence 4567788899999999865 46778999999999999999999999999999999999999999875 443 445899
Q ss_pred eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE
Q psy6127 288 TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV 367 (515)
Q Consensus 288 ~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 367 (515)
.+++|+............+...+...... ...+..+..|+.+.+|+..+++....+..... ......+....+++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 154 (342)
T d2ovrb2 78 TLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-AVRCVQYDGRRVVSGA 154 (342)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSS-CEEEEEECSSCEEEEE
T ss_pred cccccccccccceecccccceeEeeeecc--cccccccccceeEEEeecccccceeeeecccc-cceeeccccceeeeec
Confidence 99999999988888877777777776665 56788899999999999999988877765553 3344556677889999
Q ss_pred CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEE
Q psy6127 368 NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEAT 447 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 447 (515)
.++.+++||.+... .......+...+ ..+++++.++++++.||.|++||++.++++..+..+... +.+++
T Consensus 155 ~d~~i~~~d~~~~~-----~~~~~~~~~~~~--~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~---v~~~~ 224 (342)
T d2ovrb2 155 YDFMVKVWDPETET-----CLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL---TSGME 224 (342)
T ss_dssp TTSCEEEEEGGGTE-----EEEEECCCSSCE--EEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC---EEEEE
T ss_pred CCCeEEEeecccce-----eeEEEcCccccc--ccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccc---eeEEe
Confidence 99999999998754 333334454444 445557889999999999999999999998888775443 66665
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC--CCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCC
Q psy6127 448 FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG--DHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLS 513 (515)
Q Consensus 448 ~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~ 513 (515)
++ ++++++|+.||.|++||+...+....+.. .|...+.++.+++ .++++++.| +++|++...
T Consensus 225 ~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~s~Dg~i~iwd~~tg 290 (342)
T d2ovrb2 225 LK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTG 290 (342)
T ss_dssp EE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTTC
T ss_pred cC--CCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCC--CeeEEEcCCCEEEEEECCCC
Confidence 55 67999999999999999999988888765 3566777777765 578888755 999998754
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.2e-32 Score=260.94 Aligned_cols=281 Identities=14% Similarity=0.116 Sum_probs=217.7
Q ss_pred cEEEEEEcCCCCEEEEEeCCC-eEEEEECCCC--eeeeEecCCC-CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe
Q psy6127 223 KINSLDYSSDGSLLISCSDDD-QIIIYDCEQG--TSKNTINSKK-YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK 298 (515)
Q Consensus 223 ~I~~l~~spd~~~lasgs~dg-~i~iwd~~~~--~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~ 298 (515)
.+++++|+|+++.||.++.+. .|+.|+.... .....+.+|. ..|++++|+|+.+..++++|+.||+|++||+..++
T Consensus 19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~ 98 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK 98 (325)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence 467899999999999987654 3566765433 4456777774 67999999996554455566789999999987543
Q ss_pred ee--------EEecCCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCeEEEEe-cCCCeeEEEECCCCCE-EEEE
Q psy6127 299 YV--------RYFPGHVRKVSSLNLSPVDDSFISGSY--DKTVRVWDLRQPNNVGMIQ-LSGNKPIAAYDPEGLA-FAIG 366 (515)
Q Consensus 299 ~~--------~~~~~h~~~v~~l~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~-l~~g 366 (515)
.. ..+..|.++|.+++|+++++++++++. ++.+++|+.++++.+..+. +...+.+++|+|++.. ++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 178 (325)
T d1pgua1 99 ESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV 178 (325)
T ss_dssp GGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred ceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEe
Confidence 22 335678899999999999999887764 6789999999999888875 4566899999998875 6789
Q ss_pred ECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEE
Q psy6127 367 VNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLE 445 (515)
Q Consensus 367 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 445 (515)
+.|+.+++||....+ ..........+...|.+++|+|+ +.++++++.|+.|++||+++++.+..+.+|... +..
T Consensus 179 ~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~---v~~ 253 (325)
T d1pgua1 179 GDDGSVVFYQGPPFK--FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP---VQG 253 (325)
T ss_dssp ETTTEEEEEETTTBE--EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBC---CCS
T ss_pred ecccccccccccccc--cceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccc---ccc
Confidence 999999999986533 11223334567788999999996 688999999999999999999999998876654 333
Q ss_pred EEEe---cCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCC--eE--EEEECCCCCEEEEee--CCEEEEcC
Q psy6127 446 ATFT---PDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA--VQ--SLQFNPKYHMLASAC--SNMAFWIP 510 (515)
Q Consensus 446 ~~~s---p~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~--V~--~l~~sp~~~~las~~--~dv~iW~~ 510 (515)
+.|+ |+|++|++++.|+.|+|||+++++++..+.. |... +. ++.|.+++ ++++++ +.+++||+
T Consensus 254 ~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 254 GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL-DKQQLGNQQVGVVATGNG-RIISLSLDGTLNFYEL 325 (325)
T ss_dssp CEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CTTCGGGCEEEEEEEETT-EEEEEETTSCEEEEET
T ss_pred ceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEe-cCCcccCeEEEEEECCCC-EEEEEECCCEEEEEEC
Confidence 3333 6899999999999999999999999988875 4433 33 44444444 567776 44999986
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-32 Score=263.07 Aligned_cols=294 Identities=13% Similarity=0.107 Sum_probs=221.4
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeee---EecCCCCceeEEEEecCCCeEEEEEeeCCCe
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKN---TINSKKYGVDLIKFTHSKTTAIHASTKVDAT 288 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~ 288 (515)
+.++..++|++.|++|+|+|++++||+||.||+|+|||+.++.... ...+|..+|.+++|+|++..+++. |+.|+.
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~s-g~~d~~ 80 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV-GTVQGE 80 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEE-EETTSC
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEE-cccccc
Confidence 5677889999999999999999999999999999999997654432 334689999999999987655443 358999
Q ss_pred EEEEECCCCeeeEEecCCCC-CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE--e-----cCCCeeEEEECCCC
Q psy6127 289 LRYLSLHDNKYVRYFPGHVR-KVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI--Q-----LSGNKPIAAYDPEG 360 (515)
Q Consensus 289 v~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~-----~~~~~~~~~~s~~~ 360 (515)
|++|++..+........+.. ......+.+++..+++++.|+++++||++.+...... . .........+.+.+
T Consensus 81 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (342)
T d1yfqa_ 81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS 160 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred eeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccC
Confidence 99999998877766655444 4455666777889999999999999998765433222 1 11224567788899
Q ss_pred CEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcC-CCCEEEEEECCCcEEEEECCCCcee------E--
Q psy6127 361 LAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSP-DGKLILVSTNGSIIRLFDAFNGNCV------Q-- 431 (515)
Q Consensus 361 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~------~-- 431 (515)
..+++++.|+.+++||++........... ........+..+.| ++..+++++.||.+.+|+....... .
T Consensus 161 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~ 238 (342)
T d1yfqa_ 161 SRLIVGMNNSQVQWFRLPLCEDDNGTIEE--SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp SEEEEEESTTEEEEEESSCCTTCCCEEEE--CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred CceeeecCCCcEEEEecccCcccceeeee--cccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccccee
Confidence 99999999999999999876543322222 23333455555554 6788999999999999997654221 1
Q ss_pred ----EeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--E
Q psy6127 432 ----SLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--M 505 (515)
Q Consensus 432 ----~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v 505 (515)
.......+...+.+++|+|++++|++|+.||.|++||+++++++..+...| .+..++|+|++.++++++++ +
T Consensus 239 ~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~--~~~~~~~s~~~~~l~~a~sdd~~ 316 (342)
T d1yfqa_ 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN--EDSVVKIACSDNILCLATSDDTF 316 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS--SSEEEEEEECSSEEEEEEECTHH
T ss_pred eeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC--CCEEEEEEeCCCEEEEEEcCCcE
Confidence 111223445568899999999999999999999999999999999887523 45567788888888887654 5
Q ss_pred EEEcC
Q psy6127 506 AFWIP 510 (515)
Q Consensus 506 ~iW~~ 510 (515)
++|..
T Consensus 317 ~~~~~ 321 (342)
T d1yfqa_ 317 KTNAA 321 (342)
T ss_dssp HHCSS
T ss_pred EEeee
Confidence 55544
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-30 Score=243.35 Aligned_cols=275 Identities=19% Similarity=0.340 Sum_probs=214.9
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEE
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRY 291 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~v 291 (515)
+.++.+.+|...|+|++| ||++||||+.||+|+|||+.+++++.++.+|...|.+++| +++.++++ +.|+.|++
T Consensus 6 ~~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~--s~D~~i~~ 79 (293)
T d1p22a2 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITG--SSDSTVRV 79 (293)
T ss_dssp CCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEE--ETTSCEEE
T ss_pred EEEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecc--cccccccc
Confidence 344557789999999765 7899999999999999999999999999999999999887 45555544 58999999
Q ss_pred EECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCCEEEEEECC
Q psy6127 292 LSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 292 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
|++..+........+..... .+.+....++++..++.+.+||.......... ............+....+++++.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d 157 (293)
T d1p22a2 80 WDVNTGEMLNTLIHHCEAVL--HLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 157 (293)
T ss_dssp EESSSCCEEEEECCCCSCEE--EEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred cccccccccccccccccccc--cccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCC
Confidence 99999988877765554443 34455778999999999999999877644332 112223333444456788899999
Q ss_pred CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe
Q psy6127 370 DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT 449 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 449 (515)
+.+++||.++.+ .......+...+..+.++ +.++++++.|+.|++||+++.+.+.....+... + ..++
T Consensus 158 ~~i~~~d~~~~~-----~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---v--~~~~ 225 (293)
T d1p22a2 158 RTIKVWNTSTCE-----FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL---V--RCIR 225 (293)
T ss_dssp SEEEEEETTTCC-----EEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSC---E--EEEE
T ss_pred CceeeecCCCCc-----EEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeeeccccee---e--eecc
Confidence 999999998764 333334555667666664 568999999999999999999988887764432 3 3567
Q ss_pred cCCCEEEEEeCCCcEEEEECCC---------CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEc
Q psy6127 450 PDSQFVASGSTDGQVHIWNAER---------GYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWI 509 (515)
Q Consensus 450 p~g~~l~sgs~dg~I~iwd~~~---------~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~ 509 (515)
+++.+|++|+.||.|++||+.+ ..++..+.+ |.+.|++++|+ +.+|++++.| +++||
T Consensus 226 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 226 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE-HSGRVFRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp CCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC-CSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred ccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecC-CCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence 7899999999999999999643 357788887 99999999995 4678998866 99997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-31 Score=265.00 Aligned_cols=285 Identities=16% Similarity=0.252 Sum_probs=206.2
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCee------eeEecCCCCceeEEEE---ecC--CCeEEEEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTS------KNTINSKKYGVDLIKF---THS--KTTAIHAS 282 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~---~~~--~~~l~~~s 282 (515)
....++|.+.|.++++++ ++++|||.|++|+|||..+.+. ......|...+..+.. .+. ....++++
T Consensus 7 ~~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred eecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence 355789999999999875 6999999999999999765432 2222334444333222 121 12344556
Q ss_pred eeCCCeEEEEECCCCeeeE-----E-----ecCCCCCeEEEEEcCCC-----CEEEEEeCCCcEEEEEcCCCC-------
Q psy6127 283 TKVDATLRYLSLHDNKYVR-----Y-----FPGHVRKVSSLNLSPVD-----DSFISGSYDKTVRVWDLRQPN------- 340 (515)
Q Consensus 283 ~~~d~~v~vwd~~~~~~~~-----~-----~~~h~~~v~~l~~~~~~-----~~l~s~s~dg~i~iwd~~~~~------- 340 (515)
++.||.|++|++....... . ...+...+..++|.+++ .++++++.||++++||+....
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~ 164 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 164 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceee
Confidence 6789999999975432211 1 12355678888888763 578999999999999985321
Q ss_pred -----eE---EEE----ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCc-eeeecCCCCCcCeEEEEEcCCC
Q psy6127 341 -----NV---GMI----QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPF-ASFKCPGERGCEWTGLKFSPDG 407 (515)
Q Consensus 341 -----~~---~~~----~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~~i~~l~~sp~~ 407 (515)
.. ... .....+.+++|+|++ ++++|+.||+|++||+++++.... ........|..+|++++|+|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg 243 (393)
T d1sq9a_ 165 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243 (393)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred eeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccccc
Confidence 01 111 122347789999998 889999999999999987542111 1112235688899999999999
Q ss_pred CEEEEEECCCc---EEEEECCCCceeEEeecc----------ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy6127 408 KLILVSTNGSI---IRLFDAFNGNCVQSLSGV----------LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYK 474 (515)
Q Consensus 408 ~~l~~~s~dg~---i~iwd~~~~~~~~~~~~~----------~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~ 474 (515)
++|++|+.|++ |++||+.+++++..+... .+|...|++++|+|++++|++|+.|++|++||++++++
T Consensus 244 ~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~ 323 (393)
T d1sq9a_ 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 323 (393)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCE
Confidence 99999998874 899999999988877521 23556699999999999999999999999999999999
Q ss_pred EEEEcCCCCCCeE----EEEECCCCCEEEEee
Q psy6127 475 VCVLDGDHPSAVQ----SLQFNPKYHMLASAC 502 (515)
Q Consensus 475 ~~~~~~~h~~~V~----~l~~sp~~~~las~~ 502 (515)
+.++.+ |.+.|. .++|+|++..+++++
T Consensus 324 ~~~l~g-H~~~v~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 324 ITTLNM-HCDDIEIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp EEEEEC-CGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred EEEECC-cCCcccCCccEEEECCCCCEEEEcc
Confidence 999988 877664 467777776665443
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.8e-29 Score=233.87 Aligned_cols=276 Identities=17% Similarity=0.273 Sum_probs=214.2
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCC
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDD 242 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~d 242 (515)
+++....+|...|.+++|+++. | ++++.|+.|++|| +.++++++++++|++.|++++| ++++|++|+.|
T Consensus 6 ~~i~~~~~~~~~V~c~~~d~~~------l-~sgs~Dg~i~vWd--~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D 74 (293)
T d1p22a2 6 QRIHCRSETSKGVYCLQYDDQK------I-VSGLRDNTIKIWD--KNTLECKRILTGHTGSVLCLQY--DERVIITGSSD 74 (293)
T ss_dssp CCEECCCSSCCCEEEEECCSSE------E-EEEESSSCEEEEE--SSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred EEEeccCCCCCCEEEEEEcCCE------E-EEEeCCCeEEEEE--CCCCcEEEEEecCCCCEeeeec--ccceeeccccc
Confidence 3444555666668888887654 4 4888999999999 8889999999999999999987 57799999999
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe---eeEEecCCCCCeEEEEEcCCC
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK---YVRYFPGHVRKVSSLNLSPVD 319 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~ 319 (515)
+.|++|++..+........+.... ..+.+....++.+. .++.+.+||..+.. ....+..|...+..+.+. .
T Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 148 (293)
T d1p22a2 75 STVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCS--KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--D 148 (293)
T ss_dssp SCEEEEESSSCCEEEEECCCCSCE--EEEECCTTEEEEEE--TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--T
T ss_pred cccccccccccccccccccccccc--ccccccccceeecc--cccceeEeeccccccccccccccccccccccceec--c
Confidence 999999999988877766554433 34455555555554 79999999987754 345567889999888887 5
Q ss_pred CEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeE
Q psy6127 320 DSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWT 399 (515)
Q Consensus 320 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~ 399 (515)
..+++++.|+.|++||+++++.+..+.... .....+++++..+++++.||.|++||+++.. .......+...+.
T Consensus 149 ~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~v~ 222 (293)
T d1p22a2 149 KYIVSASGDRTIKVWNTSTCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRLWDIECGA-----CLRVLEGHEELVR 222 (293)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEETTEEEEEETTSCEEEEETTTCC-----EEEEECCCSSCEE
T ss_pred cccccccCCCceeeecCCCCcEEEEEcccc-cccccccCCCCeEEEecCCCEEEEEecccce-----eeeeecccceeee
Confidence 678899999999999999999988875443 2333444567899999999999999998754 3344445555554
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCC---------CceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEE
Q psy6127 400 GLKFSPDGKLILVSTNGSIIRLFDAFN---------GNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWN 468 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd 468 (515)
.+++++.+|++++.||.|++||+.. ..++..+.+|. ..|++++|+ +++|++|+.||+|++||
T Consensus 223 --~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~---~~V~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 223 --CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS---GRVFRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp --EEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCS---SCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred --eccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCC---CCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence 4667888999999999999999643 23456666654 448888884 67899999999999997
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.5e-29 Score=236.94 Aligned_cols=270 Identities=16% Similarity=0.131 Sum_probs=211.9
Q ss_pred ccccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeC
Q psy6127 162 LHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSD 241 (515)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~ 241 (515)
.+.+++++||...|.++.+.+ | ++++.|+.+++|+ +... .++|+..|.++++++++ .+++++.
T Consensus 3 ~~~i~~l~gH~~~I~~l~~s~--------l-~sgs~Dg~v~~Wd--~~~~-----~~~h~~~V~~~~~~~~~-~~~s~s~ 65 (287)
T d1pgua2 3 DEVLKTISGHNKGITALTVNP--------L-ISGSYDGRIMEWS--SSSM-----HQDHSNLIVSLDNSKAQ-EYSSISW 65 (287)
T ss_dssp EEEEEEECCCSSCEEEEETTT--------T-EEEETTSCEEETT--TTEE-----ECCCCSCEEEEECCSTT-CCEEEET
T ss_pred cceeEEECCCCCceEEEEECc--------E-EEEeCCCeEEEEE--CCCC-----CCCCCCCEEEEEecCCC-eEEEEee
Confidence 467889999988888888864 2 3788999999999 4433 46899999999999765 5789999
Q ss_pred CCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
|+++++|+....+ ....+.++++.+++..++.+ .++.+.+|+..+++.+..+..+ ..+ .+++|+++.
T Consensus 66 D~~v~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~ 132 (287)
T d1pgua2 66 DDTLKVNGITKHE-------FGSQPKVASANNDGFTAVLT---NDDDLLILQSFTGDIIKSVRLN-SPG--SAVSLSQNY 132 (287)
T ss_dssp TTEEEETTEEEEE-------CSSCEEEEEECSSSEEEEEE---TTSEEEEEETTTCCEEEEEECS-SCE--EEEEECSSE
T ss_pred ccccccccccccc-------cccceeeeeeccCCceEEEe---ecccceeeeccceeeeeecccc-cee--eeeeccCcc
Confidence 9999999875422 23456778888887655443 4888999999999888877643 333 456677888
Q ss_pred EEEEeCCC-cEEEEEcCCCCeEEEE--ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCe
Q psy6127 322 FISGSYDK-TVRVWDLRQPNNVGMI--QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEW 398 (515)
Q Consensus 322 l~s~s~dg-~i~iwd~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i 398 (515)
+++++.|+ .+++|++...+....+ .+...+.+++|+|++.+|++|+.||.|++||+.+.. ........|...|
T Consensus 133 ~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~----~~~~~~~~h~~~v 208 (287)
T d1pgua2 133 VAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE----VKTSRWAFRTSKI 208 (287)
T ss_dssp EEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEECCSCCCSSCE
T ss_pred eeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccc----ccccccccccccc
Confidence 88888765 7999999876665554 344568999999999999999999999999998754 1223356788899
Q ss_pred EEEEEcCC----------CCEEEEEECCCcEEEEECCCC-ceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 399 TGLKFSPD----------GKLILVSTNGSIIRLFDAFNG-NCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 399 ~~l~~sp~----------~~~l~~~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
.+++|+|. +.++++|+.|+.|++||++++ +.+..+.+ |...|++++|+|++ .+++++.||.|++|
T Consensus 209 ~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~---h~~~V~~v~~~~~~-~l~s~g~D~~v~iW 284 (287)
T d1pgua2 209 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA---HKDGVNNLLWETPS-TLVSSGADACIKRW 284 (287)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS---STTCEEEEEEEETT-EEEEEETTSCEEEE
T ss_pred ceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCC---CCCCeEEEEECCCC-EEEEEECCCeEEEE
Confidence 99999875 468999999999999999774 44555555 44459999999986 58889999999999
Q ss_pred EC
Q psy6127 468 NA 469 (515)
Q Consensus 468 d~ 469 (515)
++
T Consensus 285 ~i 286 (287)
T d1pgua2 285 NV 286 (287)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=6e-30 Score=248.57 Aligned_cols=317 Identities=10% Similarity=0.022 Sum_probs=232.2
Q ss_pred EEEEEE-eeccccceeeeeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCC--eEEEEECC
Q psy6127 175 SLFVTF-VSRVLTMAASLAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDD--QIIIYDCE 251 (515)
Q Consensus 175 ~~~~~~-~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg--~i~iwd~~ 251 (515)
+..++| +++. +++.. ++.+.+|+ ....+..+. +|...|.+++|+|||++|++++.+. .|++||.+
T Consensus 7 ~~~fSP~dG~~------~a~~~--~g~v~v~d--~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~ 74 (360)
T d1k32a3 7 AEDFSPLDGDL------IAFVS--RGQAFIQD--VSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYR 74 (360)
T ss_dssp EEEEEECGGGC------EEEEE--TTEEEEEC--TTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETT
T ss_pred cccccCCCCCE------EEEEE--CCeEEEEE--CCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECC
Confidence 345666 4554 44333 35688898 556665553 7999999999999999998877653 79999998
Q ss_pred CCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEe-----
Q psy6127 252 QGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGS----- 326 (515)
Q Consensus 252 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s----- 326 (515)
+++. ..+..|...+.+++|+|+++++++++ .++.+++|++.+++....+..|...+.+++|+|+|++|+.++
T Consensus 75 ~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~ 151 (360)
T d1k32a3 75 TGKA-EKFEENLGNVFAMGVDRNGKFAVVAN--DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHG 151 (360)
T ss_dssp TCCE-EECCCCCCSEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSS
T ss_pred CCcE-EEeeCCCceEEeeeecccccccceec--cccccccccccccceeeeeecccccccchhhccceeeeeeecccccc
Confidence 7655 46778999999999999999888775 699999999999999999999999999999999999998654
Q ss_pred -----CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCC--ceeeecCCCCCcCeE
Q psy6127 327 -----YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGP--FASFKCPGERGCEWT 399 (515)
Q Consensus 327 -----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~~i~ 399 (515)
.++.+++||+.+++.............++|+|+|+.|++++.++.+.+||........ .........+.....
T Consensus 152 ~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (360)
T d1k32a3 152 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN 231 (360)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCC
T ss_pred ceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccc
Confidence 3456999999998877777777778889999999999999999999999876532100 001111112223333
Q ss_pred EEEEcCCCCEEEEEECCC-----cEEEEECCCCceeEEeeccccCCCCCEEEEEecCC---CEEEEEeCCCcEEEEECCC
Q psy6127 400 GLKFSPDGKLILVSTNGS-----IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDS---QFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 400 ~l~~sp~~~~l~~~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g---~~l~sgs~dg~I~iwd~~~ 471 (515)
.+.|+|++..++++..+. .+..++...+.. ..+..+..+ +..+.+.+.+ .++++++.++.+++||+.+
T Consensus 232 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 307 (360)
T d1k32a3 232 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESS---ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 307 (360)
T ss_dssp GGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSE---EEEEECCCCCSHHHHHHCCCCCEEEEEEETTT
T ss_pred cceECCCcCcccccceeecccccceeecccCcCce-eEeeecCCC---ceEEEEEecCCCeeEEEecCCCCEEEEEECCC
Confidence 456777777666554332 233344444433 233333322 4444544443 4678888999999999998
Q ss_pred CeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCC--EEEEcCCCCCC
Q psy6127 472 GYKVCVLDGDHPSAVQSLQFNPKYHMLASACSN--MAFWIPTLSAD 515 (515)
Q Consensus 472 ~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~d--v~iW~~~~~~d 515 (515)
++... |.+.|.+++|+|||++|++++.| +++|+++.+++
T Consensus 308 ~~~~~-----~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~ 348 (360)
T d1k32a3 308 RKVTE-----VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348 (360)
T ss_dssp CCEEE-----EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTS
T ss_pred CeEEE-----ecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCc
Confidence 87543 44569999999999999998754 99999987653
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.7e-27 Score=233.84 Aligned_cols=284 Identities=14% Similarity=0.101 Sum_probs=197.0
Q ss_pred cccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeee----eEeeeeccccCCcEEEE------EEcC-CCCE
Q psy6127 167 SLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRS----YRVAKVFRENTDKINSL------DYSS-DGSL 235 (515)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~----~~~~~~~~~h~~~I~~l------~~sp-d~~~ 235 (515)
..++|...|.++++.++. + ++++.|+.+++|+..... .........|...+..+ ..++ ++.+
T Consensus 9 ~~~~H~~~I~~v~~~~~~------l-~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (393)
T d1sq9a_ 9 AGKAHDADIFSVSACNSF------T-VSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81 (393)
T ss_dssp ESSCSSSCEEEEEECSSE------E-EEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred cCCcccCccEEEEEeCCE------E-EEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcE
Confidence 457887778888877653 3 377889999999832111 11112223344443332 2222 3457
Q ss_pred EEEEeCCCeEEEEECCCCeeeeEe----------cCCCCceeEEEEecCCCe---EEEEEeeCCCeEEEEECCCCe----
Q psy6127 236 LISCSDDDQIIIYDCEQGTSKNTI----------NSKKYGVDLIKFTHSKTT---AIHASTKVDATLRYLSLHDNK---- 298 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~---l~~~s~~~d~~v~vwd~~~~~---- 298 (515)
+++++.||.|++|++........+ ..+...+..++|.++... ..+++++.|+++++|++....
T Consensus 82 ~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~ 161 (393)
T d1sq9a_ 82 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 161 (393)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccc
Confidence 889999999999997644322111 223456788888876531 223334589999999974321
Q ss_pred --------------eeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe-------cCCCeeEEEEC
Q psy6127 299 --------------YVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ-------LSGNKPIAAYD 357 (515)
Q Consensus 299 --------------~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~s 357 (515)
.......+...+.+++|+|++ +|++|+.||+|++||+++++.+..+. +...+.+++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s 240 (393)
T d1sq9a_ 162 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240 (393)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred eeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccc
Confidence 111223456678999999987 89999999999999999998877653 45679999999
Q ss_pred CCCCEEEEEECCCc---EEEEEeecCCCCC--------ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy6127 358 PEGLAFAIGVNSDS---IKLYDVRSYDKGP--------FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 358 ~~~~~l~~g~~dg~---i~i~d~~~~~~~~--------~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~ 426 (515)
|+|++|++|+.|++ |++||+++++... ........+|...|++++|+|++++|++++.|++|++||+++
T Consensus 241 pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~ 320 (393)
T d1sq9a_ 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320 (393)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCC
Confidence 99999999998874 8999998754211 011122346888999999999999999999999999999999
Q ss_pred CceeEEeeccccCCC-CCEEEEEecCCCEEEEE
Q psy6127 427 GNCVQSLSGVLNNNA-SPLEATFTPDSQFVASG 458 (515)
Q Consensus 427 ~~~~~~~~~~~~~~~-~i~~~~~sp~g~~l~sg 458 (515)
++++.++.+|..... ....++|+|++..++++
T Consensus 321 g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~ 353 (393)
T d1sq9a_ 321 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 353 (393)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred CCEEEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence 999999998765421 12346677777666544
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=8.3e-28 Score=230.16 Aligned_cols=295 Identities=9% Similarity=0.022 Sum_probs=215.1
Q ss_pred cccccccCCceeEEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE---eeeeccccCCcEEEEEEcCC-CCEEEE
Q psy6127 163 HSLSSLESPHFVSLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR---VAKVFRENTDKINSLDYSSD-GSLLIS 238 (515)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~---~~~~~~~h~~~I~~l~~spd-~~~las 238 (515)
+.+...++|...|.+++|.|... +.++++.|+.+++|| +.... ......+|.++|.+++|+|+ +.+|++
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~-----~L~s~s~Dg~v~iwd--~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~s 74 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKS-----LLLITSWDGSLTVYK--FDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGT-----EEEEEETTSEEEEEE--EETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEE
T ss_pred CeEEcCCCCCCCEEEEEEeCCCC-----EEEEEECCCeEEEEE--ccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEE
Confidence 44566778877788888887543 334678899999998 54322 22334479999999999986 468999
Q ss_pred EeCCCeEEEEECCCCeeeeEecCCCCcee-EEEEecCCCeEEEEEeeCCCeEEEEECCCCee----eEEecCC--CCCeE
Q psy6127 239 CSDDDQIIIYDCEQGTSKNTINSKKYGVD-LIKFTHSKTTAIHASTKVDATLRYLSLHDNKY----VRYFPGH--VRKVS 311 (515)
Q Consensus 239 gs~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~----~~~~~~h--~~~v~ 311 (515)
|+.||+|++|+...+........+..... ...+.++...++.+ +.++.+++||++++.. ......+ .....
T Consensus 75 g~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (342)
T d1yfqa_ 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAA--SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK 152 (342)
T ss_dssp EETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEE--ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCC
T ss_pred cccccceeeeeccccccccccccccccccccccccccccccccc--ccccccceeeccccccceeeecccccccccceee
Confidence 99999999999998877776665554444 44455566655544 4799999999865432 2222222 23445
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE----ecCCCeeEEEE-CCCCCEEEEEECCCcEEEEEeecCCCCCc-
Q psy6127 312 SLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI----QLSGNKPIAAY-DPEGLAFAIGVNSDSIKLYDVRSYDKGPF- 385 (515)
Q Consensus 312 ~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~-s~~~~~l~~g~~dg~i~i~d~~~~~~~~~- 385 (515)
...+.+.+..+++++.|+.|++||++..+..... .......+..+ .+++..+++++.||.+.+|+.........
T Consensus 153 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~ 232 (342)
T d1yfqa_ 153 IFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp EEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC
T ss_pred eeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeec
Confidence 6677888999999999999999999876643322 22233444444 45778999999999999999876432111
Q ss_pred ---ee------eecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 386 ---AS------FKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 386 ---~~------~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
.. ......+...+++++|+|++++|++|+.||.|++||+.+++.+..+..+. ....++|+|+|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~----~~~~~~~s~~~~~l~ 308 (342)
T d1yfqa_ 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN----EDSVVKIACSDNILC 308 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS----SSEEEEEEECSSEEE
T ss_pred cccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC----CCEEEEEEeCCCEEE
Confidence 01 11123556678999999999999999999999999999999888776432 267889999999999
Q ss_pred EEeCCCcEEEEECC
Q psy6127 457 SGSTDGQVHIWNAE 470 (515)
Q Consensus 457 sgs~dg~I~iwd~~ 470 (515)
+++.|+.+++|...
T Consensus 309 ~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 309 LATSDDTFKTNAAI 322 (342)
T ss_dssp EEEECTHHHHCSSS
T ss_pred EEEcCCcEEEeeee
Confidence 99999988888653
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=2.1e-26 Score=229.89 Aligned_cols=311 Identities=14% Similarity=0.066 Sum_probs=216.4
Q ss_pred eeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE--e---cCCCCce
Q psy6127 192 AHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT--I---NSKKYGV 266 (515)
Q Consensus 192 ~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~--~---~~~~~~v 266 (515)
..+..+++.+++|| ..+++++.++..|. .+..++|||||++|++++.|++|++||+.+++.... + .+|...+
T Consensus 35 ~V~~~~dg~v~vwD--~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~ 111 (426)
T d1hzua2 35 SVTLRDAGQIALVD--GDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE 111 (426)
T ss_dssp EEEETTTTEEEEEE--TTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEE
T ss_pred EEEEcCCCEEEEEE--CCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceE
Confidence 34677899999999 88999999999885 589999999999999999999999999998875433 2 2455566
Q ss_pred eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCe-----------EEEEEcCCCCEEEEEeC-CCcEEEE
Q psy6127 267 DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKV-----------SSLNLSPVDDSFISGSY-DKTVRVW 334 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v-----------~~l~~~~~~~~l~s~s~-dg~i~iw 334 (515)
.+++|+|||+++++++ ..++.+.+||..++++...+..|...+ ..+.+++++..++.... .+.+.++
T Consensus 112 ~s~~~spDG~~l~v~~-~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~ 190 (426)
T d1hzua2 112 SSKFKGYEDRYTIAGA-YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV 190 (426)
T ss_dssp ECCSTTCTTTEEEEEE-EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred EeeeecCCCCEEEEee-cCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEE
Confidence 7778889999887665 469999999999999888776655444 44555555554444333 3445555
Q ss_pred EcCCCCe--EEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC-EE
Q psy6127 335 DLRQPNN--VGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK-LI 410 (515)
Q Consensus 335 d~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~-~l 410 (515)
+...... +........+..+.++|++++++++. .+..+.+++..+.+.. ..... ...........+.+.+. .+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~ 267 (426)
T d1hzua2 191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS--ALVDV-GKTPHPGRGANFVHPKYGPV 267 (426)
T ss_dssp ECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEE--EEEEC-SSCCCCSCCEEEEETTTEEE
T ss_pred EeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEE--EEecc-CCcccccceeeeecCCCCce
Confidence 5554443 23345556678899999999988876 4566888888765421 11111 11111122233332222 22
Q ss_pred E--EEECCCcEEEEECCC-------CceeEEeeccccCCCCCEEEEEecCCCEEEE-------EeCCCcEEEEECCCCeE
Q psy6127 411 L--VSTNGSIIRLFDAFN-------GNCVQSLSGVLNNNASPLEATFTPDSQFVAS-------GSTDGQVHIWNAERGYK 474 (515)
Q Consensus 411 ~--~~s~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~s-------gs~dg~I~iwd~~~~~~ 474 (515)
. ..+.|+.+.+|+... ++....+.+|... +..++|+||+++|++ ++.|++|+|||+.+++.
T Consensus 268 ~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~---v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~ 344 (426)
T d1hzua2 268 WSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG---SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 344 (426)
T ss_dssp EEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSC---CCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEeccCCCceEEEeeccccccccccceEeEEEecCCCc---eeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCc
Confidence 2 223467777777543 4667777775443 889999999999995 45678999999999876
Q ss_pred EEEEc--------CCCCCCeEEEEECCCCCEEE-Ee--e----CCEEEEcCCC
Q psy6127 475 VCVLD--------GDHPSAVQSLQFNPKYHMLA-SA--C----SNMAFWIPTL 512 (515)
Q Consensus 475 ~~~~~--------~~h~~~V~~l~~sp~~~~la-s~--~----~dv~iW~~~~ 512 (515)
..++. ..|...|.+++|||||+.++ ++ + +.++|||.++
T Consensus 345 ~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T 397 (426)
T d1hzua2 345 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 397 (426)
T ss_dssp CCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTT
T ss_pred CeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCC
Confidence 65542 13667899999999999664 32 1 2399999765
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=1.7e-27 Score=231.05 Aligned_cols=320 Identities=10% Similarity=0.043 Sum_probs=226.4
Q ss_pred hheeecccccccccccCCCCcCCCcchhhccccccccCCceeEEEEEEeeccccceeeeeeeC-CCCcEEEEccceeeee
Q psy6127 133 KIVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFVSLFVTFVSRVLTMAASLAHSR-SSRTITKCSENLVRSY 211 (515)
Q Consensus 133 ~~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~~~~~i~~wd~~~~~~ 211 (515)
+++|++ ..|+| .+||.+.++.+.. +|...+.+++|.+.... |++++ ++...+++|+ ...+
T Consensus 16 ~~~a~~-~~g~v----------~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~----l~~~~~~~g~~v~v~d--~~~~ 76 (360)
T d1k32a3 16 DLIAFV-SRGQA----------FIQDVSGTYVLKV--PEPLRIRYVRRGGDTKV----AFIHGTREGDFLGIYD--YRTG 76 (360)
T ss_dssp GCEEEE-ETTEE----------EEECTTSSBEEEC--SCCSCEEEEEECSSSEE----EEEEEETTEEEEEEEE--TTTC
T ss_pred CEEEEE-ECCeE----------EEEECCCCcEEEc--cCCCCEEEEEECCCCCE----EEEEEcCCCCEEEEEE--CCCC
Confidence 667774 45778 9999998877664 45444666666655432 33333 3345788998 5554
Q ss_pred EeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------
Q psy6127 212 RVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST-------- 283 (515)
Q Consensus 212 ~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~-------- 283 (515)
+. +.+.+|...|.+++|+|||++|++++.++.+++|+..+++....+..|...+.+++|+|+++.++++..
T Consensus 77 ~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~ 155 (360)
T d1k32a3 77 KA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 155 (360)
T ss_dssp CE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred cE-EEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceee
Confidence 43 567899999999999999999999999999999999999999999999999999999999999887642
Q ss_pred eCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeE-------EEEe-cCCCeeEEE
Q psy6127 284 KVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNV-------GMIQ-LSGNKPIAA 355 (515)
Q Consensus 284 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-------~~~~-~~~~~~~~~ 355 (515)
..++.+++||..+++..... .|...+..++|+|+|+.|++++.|+.+++||....... .... .......+.
T Consensus 156 ~~~~~~~v~d~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (360)
T d1k32a3 156 YVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK 234 (360)
T ss_dssp CCEEEEEEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGG
T ss_pred ccccceeeeccccCceeeec-ccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccce
Confidence 23567999999988766544 47778899999999999999999999999997654322 1121 122234456
Q ss_pred ECCCCCEEEEEECCC---cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC---CCEEEEEECCCcEEEEECCCCce
Q psy6127 356 YDPEGLAFAIGVNSD---SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD---GKLILVSTNGSIIRLFDAFNGNC 429 (515)
Q Consensus 356 ~s~~~~~l~~g~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~---~~~l~~~s~dg~i~iwd~~~~~~ 429 (515)
+++++..++++..+. ..++|.+...... ...+. .+...+..+.+.+. +.++++++.++.+++||+.+++.
T Consensus 235 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 310 (360)
T d1k32a3 235 LVPRSMTSEAGEYDLNDMYKRSSPINVDPGD-YRMII---PLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 310 (360)
T ss_dssp CCCGGGSCCCCCCCCTTGGGGCEECSCCCBC-EEEEE---ECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE
T ss_pred ECCCcCcccccceeecccccceeecccCcCc-eeEee---ecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE
Confidence 677766655543321 1223333221110 11111 11222333444433 34567778889999999988765
Q ss_pred eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCC
Q psy6127 430 VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSA 485 (515)
Q Consensus 430 ~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 485 (515)
.. +. .+ +..++|+|||++|++++.||.|++||+++++...++.. +..+
T Consensus 311 ~~-~~---~~---v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~-d~~~ 358 (360)
T d1k32a3 311 TE-VK---NN---LTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVET-DKRP 358 (360)
T ss_dssp EE-EE---EE---EEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCC-CSSC
T ss_pred EE-ec---CC---cCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEe-cccc
Confidence 32 22 22 78999999999999999999999999999988777765 4444
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.95 E-value=2.2e-24 Score=203.50 Aligned_cols=271 Identities=15% Similarity=0.149 Sum_probs=218.7
Q ss_pred eCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEe
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLI-SCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFT 272 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~la-sgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 272 (515)
+..++..|.+|| ..+++.++++... ..+..++|+|||++|+ +++.++.|++||+.+++.+..+..+. .+..++|+
T Consensus 7 ~~~~~~~v~v~D--~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~ 82 (301)
T d1l0qa2 7 ANSESDNISVID--VTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (301)
T ss_dssp EETTTTEEEEEE--TTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EECCCCEEEEEE--CCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccccc
Confidence 456677899999 7888888888754 4578999999999875 66678999999999999999988775 46889999
Q ss_pred cCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCeEEEEecCCCe
Q psy6127 273 HSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQLSGNK 351 (515)
Q Consensus 273 ~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 351 (515)
+++..+++.. ..++.+.+|+..+++....+..+ ....++.|+|+++.++ ++..++.+.+|+..++.....+.....+
T Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (301)
T d1l0qa2 83 PDGKQVYVTN-MASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP 160 (301)
T ss_dssp TTSSEEEEEE-TTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSE
T ss_pred cccccccccc-cccceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCc
Confidence 9999887765 57899999999999988888744 5678899999999765 5556888999999999999998888888
Q ss_pred eEEEECCCCCEEEEEECC-CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCC
Q psy6127 352 PIAAYDPEGLAFAIGVNS-DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN---GSIIRLFDAFNG 427 (515)
Q Consensus 352 ~~~~~s~~~~~l~~g~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~---dg~i~iwd~~~~ 427 (515)
..+.++|++..++++..+ +.+.+|+..... ..... ........++|+++++.++++.. ++.|++||..++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~ 234 (301)
T d1l0qa2 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTNS-----VIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (301)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTE-----EEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred eEEEeeccccceeeeccccccccccccccee-----eeecc-cccCCcceeeccccccccccccccceeeeeeeeecCCC
Confidence 999999999998888765 455666655432 21111 22334668999999998876653 467999999999
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEE-EEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFV-ASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l-~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
+....+.... .+..++|+|||++| ++++.|+.|++||+++++.+.++..
T Consensus 235 ~~~~~~~~~~----~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v 284 (301)
T d1l0qa2 235 KITARIPVGP----DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV 284 (301)
T ss_dssp EEEEEEECCS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEcCCC----CEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence 9888776432 37899999999987 5677899999999999999998864
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=9.6e-26 Score=225.12 Aligned_cols=339 Identities=12% Similarity=0.047 Sum_probs=233.2
Q ss_pred heeecccccccccccCCCCcCCCcchhhccccccccCCcee-EEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE
Q psy6127 134 IVAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFV-SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR 212 (515)
Q Consensus 134 ~la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~ 212 (515)
++++...+++| ++||..+++.+.+++.|..+ ..+++++++. + ++++.|+.+++|| +.+++
T Consensus 34 ~~V~~~~dg~v----------~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~------l-~~~~~d~~v~vwd--~~t~~ 94 (426)
T d1hzua2 34 FSVTLRDAGQI----------ALVDGDSKKIVKVIDTGYAVHISRMSASGRY------L-LVIGRDARIDMID--LWAKE 94 (426)
T ss_dssp EEEEETTTTEE----------EEEETTTCSEEEEEECCSSEEEEEECTTSCE------E-EEEETTSEEEEEE--TTSSS
T ss_pred EEEEEcCCCEE----------EEEECCCCcEEEEEeCCCCeeEEEECCCCCE------E-EEEeCCCCEEEEE--ccCCc
Confidence 34566778888 99999999999999988543 4455555554 3 2455678899998 54444
Q ss_pred e-----eeeccccCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeeeeEecCCCCcee-----------EEEEecCC
Q psy6127 213 V-----AKVFRENTDKINSLDYSSDGSLLISC-SDDDQIIIYDCEQGTSKNTINSKKYGVD-----------LIKFTHSK 275 (515)
Q Consensus 213 ~-----~~~~~~h~~~I~~l~~spd~~~lasg-s~dg~i~iwd~~~~~~~~~~~~~~~~v~-----------~~~~~~~~ 275 (515)
+ +....+|.+.+.+++|+|||++++++ ..++.+++||..++++...+..+...+. .+.+++++
T Consensus 95 ~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~ 174 (426)
T d1hzua2 95 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 174 (426)
T ss_dssp CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred eeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCC
Confidence 3 23445788889999999999987555 5789999999999998888776654444 44555555
Q ss_pred CeEEEEEeeCCCeEEEEECCCCeee-EEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEEEEecCC---C
Q psy6127 276 TTAIHASTKVDATLRYLSLHDNKYV-RYFPGHVRKVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVGMIQLSG---N 350 (515)
Q Consensus 276 ~~l~~~s~~~d~~v~vwd~~~~~~~-~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~---~ 350 (515)
..++... ...+.+.+++....... ....++...+..+.|+|++++++++. .+..+.+++..+++.+....... .
T Consensus 175 ~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (426)
T d1hzua2 175 PEFIVNV-KETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 253 (426)
T ss_dssp SEEEEEE-TTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCC
T ss_pred CEEEEec-CCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccc
Confidence 5444443 23455555555444322 23345778899999999999877766 45678999999999887774432 1
Q ss_pred eeEEEECCCCC-EEE--EEECCCcEEEEEeecCCCCC--ceeeecCCCCCcCeEEEEEcCCCCEEEE-------EECCCc
Q psy6127 351 KPIAAYDPEGL-AFA--IGVNSDSIKLYDVRSYDKGP--FASFKCPGERGCEWTGLKFSPDGKLILV-------STNGSI 418 (515)
Q Consensus 351 ~~~~~~s~~~~-~l~--~g~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~~i~~l~~sp~~~~l~~-------~s~dg~ 418 (515)
.....+.+.+. ... ..+.++.+.+|+........ .........|...+..++|+|+++++++ ++.+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~t 333 (426)
T d1hzua2 254 GRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS 333 (426)
T ss_dssp SCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTC
T ss_pred cceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCE
Confidence 22233333222 222 23357788888876542211 1123334467777889999999999995 345789
Q ss_pred EEEEECCCCceeEEeec------cccCCCCCEEEEEecCCCEEEEE-----eCCCcEEEEECCCCeEEEEEcCCCCCCeE
Q psy6127 419 IRLFDAFNGNCVQSLSG------VLNNNASPLEATFTPDSQFVASG-----STDGQVHIWNAERGYKVCVLDGDHPSAVQ 487 (515)
Q Consensus 419 i~iwd~~~~~~~~~~~~------~~~~~~~i~~~~~sp~g~~l~sg-----s~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 487 (515)
|++||+.+++...++.. +..+...+..++|||||++++.+ +.+|.|+|||.++++....+.+ +.
T Consensus 334 v~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~-~~---- 408 (426)
T d1hzua2 334 VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD-PR---- 408 (426)
T ss_dssp EEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECC-TT----
T ss_pred EEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECC-CC----
Confidence 99999999987766532 23345558899999999977432 3578899999999999999987 43
Q ss_pred EEEECCCCCEEE
Q psy6127 488 SLQFNPKYHMLA 499 (515)
Q Consensus 488 ~l~~sp~~~~la 499 (515)
.++|+|++-+
T Consensus 409 --~~tp~Gk~~~ 418 (426)
T d1hzua2 409 --LITPTGKFNV 418 (426)
T ss_dssp --CCSEEEEEEH
T ss_pred --ccCCCceEeE
Confidence 3457777643
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.94 E-value=4.9e-23 Score=194.09 Aligned_cols=262 Identities=12% Similarity=0.143 Sum_probs=208.8
Q ss_pred EEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEc
Q psy6127 237 ISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLS 316 (515)
Q Consensus 237 asgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~ 316 (515)
++++.|++|.+||+++++.+.++... ..+..++|+|+|++++++. +.++.|++||+.+++.+..+..|. .+..++|+
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~-~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~ 82 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVAN-AHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEE-GGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEE-CCCCEEEEEECCCCceeeeeeccc-cccccccc
Confidence 45678999999999999999988765 4578999999999887655 578999999999999999988765 46899999
Q ss_pred CCCCEEE-EEeCCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCC
Q psy6127 317 PVDDSFI-SGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGER 394 (515)
Q Consensus 317 ~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~ 394 (515)
+++..++ ++..++.+.+|+..+++....+........++++|++..++... .++.+.+|+..+.. ..... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~ 156 (301)
T d1l0qa2 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA-----VINTV-SV 156 (301)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----EEEEE-EC
T ss_pred cccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccc-----eeeec-cc
Confidence 9998655 55567889999999999999998888889999999999876554 57789999987753 22221 12
Q ss_pred CcCeEEEEEcCCCCEEEEEECC-CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe---CCCcEEEEECC
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNG-SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS---TDGQVHIWNAE 470 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~d-g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs---~dg~I~iwd~~ 470 (515)
...+..++++|+++++++++.+ +.+.+|+....+......... .+..++|++++..++.++ .++.|++||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~ 232 (301)
T d1l0qa2 157 GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA----APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (301)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS----EEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred CCCceEEEeeccccceeeecccccccccccccceeeeecccccC----CcceeeccccccccccccccceeeeeeeeecC
Confidence 2346789999999998888765 567788877777666655432 267899999999887654 34689999999
Q ss_pred CCeEEEEEcCCCCCCeEEEEECCCCCEE-EEeeC--CEEEEcCCCC
Q psy6127 471 RGYKVCVLDGDHPSAVQSLQFNPKYHML-ASACS--NMAFWIPTLS 513 (515)
Q Consensus 471 ~~~~~~~~~~~h~~~V~~l~~sp~~~~l-as~~~--dv~iW~~~~~ 513 (515)
+++.+..+.. ...+++++|+|||++| ++++. .+++||++..
T Consensus 233 t~~~~~~~~~--~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~ 276 (301)
T d1l0qa2 233 TNKITARIPV--GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276 (301)
T ss_dssp TTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEcC--CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCC
Confidence 9999988874 4578999999999976 45543 3999998754
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.93 E-value=7.7e-25 Score=218.54 Aligned_cols=304 Identities=10% Similarity=0.005 Sum_probs=210.6
Q ss_pred eeeeCCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--eEe---cCCCCc
Q psy6127 191 LAHSRSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSK--NTI---NSKKYG 265 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~--~~~---~~~~~~ 265 (515)
++.+.++++.+.+|| ..+++++..+..|. .+..++|||||+++++++.|+++++||+.+++.. ..+ ..|.+.
T Consensus 34 ~~v~~~d~g~v~v~D--~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~ 110 (432)
T d1qksa2 34 FSVTLRDAGQIALID--GSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSI 110 (432)
T ss_dssp EEEEETTTTEEEEEE--TTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEE
T ss_pred EEEEEcCCCEEEEEE--CCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCe
Confidence 345778899999999 88999999998874 6999999999999999999999999999887643 333 244455
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC-----------CCCeEEEEEcCCCCEE-EEEeCCCcEEE
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH-----------VRKVSSLNLSPVDDSF-ISGSYDKTVRV 333 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h-----------~~~v~~l~~~~~~~~l-~s~s~dg~i~i 333 (515)
+.+..|+|||+++++.. +.++++++||..+++.+..+..| ......+.++|+++.+ ++...++.|.+
T Consensus 111 ~~s~~~SpDG~~l~vs~-~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~ 189 (432)
T d1qksa2 111 ETSKMEGWEDKYAIAGA-YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 189 (432)
T ss_dssp EECCSTTCTTTEEEEEE-EETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEecccCCCCCEEEEEc-CCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEE
Confidence 66667888999887655 46999999999999988776543 3456788999999865 56667899999
Q ss_pred EEcCCCCeEE--EEecCCCeeEEEECCCCCEEEEEEC-CCcEEEEEeecCCCCCceeeecCCCCC---------------
Q psy6127 334 WDLRQPNNVG--MIQLSGNKPIAAYDPEGLAFAIGVN-SDSIKLYDVRSYDKGPFASFKCPGERG--------------- 395 (515)
Q Consensus 334 wd~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~--------------- 395 (515)
||..+++... .+........++|+|+|+++++++. ++.+.++|....+............+.
T Consensus 190 ~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 269 (432)
T d1qksa2 190 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVW 269 (432)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEE
T ss_pred EEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCcee
Confidence 9999887554 4455566789999999998887775 557888887653211000000001111
Q ss_pred ------------------------cCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecC
Q psy6127 396 ------------------------CEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 396 ------------------------~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
..+....++|++..+++++.++..++|+..+... +... ...+++ ||
T Consensus 270 ~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~------~~~~---~~sv~v-pD 339 (432)
T d1qksa2 270 ATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNP------EAEI---SGSVAV-FD 339 (432)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCS------SHHH---HTCEEE-EE
T ss_pred cccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCC------CCCe---eeEEEE-Ee
Confidence 2233344444444444444444444444322211 0000 123343 78
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEee-------CCEEEEcCCC
Q psy6127 452 SQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASAC-------SNMAFWIPTL 512 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~-------~dv~iW~~~~ 512 (515)
++.+++++.|+.+++|++.++..+ .. |...|.+++|+|||++++.+. +.+.|||-..
T Consensus 340 g~~la~~s~d~~~k~w~~~~~~~l---~~-~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T 403 (432)
T d1qksa2 340 IKAMTGDGSDPEFKTLPIAEWAGI---TE-GQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 403 (432)
T ss_dssp GGGCCCSSSCCCEEEECHHHHHTC---CS-SCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred chhhcccccCCceEeccccccccc---CC-CCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCC
Confidence 888888888999999987655322 23 777899999999999875543 2388998654
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.92 E-value=1.2e-24 Score=217.24 Aligned_cols=319 Identities=13% Similarity=0.038 Sum_probs=219.5
Q ss_pred eeecccccccccccCCCCcCCCcchhhccccccccCCcee-EEEEEEeeccccceeeeeeeCCCCcEEEEccceeeeeE-
Q psy6127 135 VAKSENMCNLTKLDLPYNKLGSWDFELLHSLSSLESPHFV-SLFVTFVSRVLTMAASLAHSRSSRTITKCSENLVRSYR- 212 (515)
Q Consensus 135 la~~~~~~~i~~~~~~~n~~~~wd~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~s~~~~~~i~~wd~~~~~~~- 212 (515)
+++-+.+++| .+||.++++.+.+++.+..+ ..+++++++. ++ +++.|+.+++|| +.+.+
T Consensus 35 ~v~~~d~g~v----------~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~------l~-~~s~dg~v~~~d--~~t~~~ 95 (432)
T d1qksa2 35 SVTLRDAGQI----------ALIDGSTYEIKTVLDTGYAVHISRLSASGRY------LF-VIGRDGKVNMID--LWMKEP 95 (432)
T ss_dssp EEEETTTTEE----------EEEETTTCCEEEEEECSSCEEEEEECTTSCE------EE-EEETTSEEEEEE--TTSSSC
T ss_pred EEEEcCCCEE----------EEEECCCCcEEEEEeCCCCeeEEEECCCCCE------EE-EEcCCCCEEEEE--eeCCCc
Confidence 3566777888 99999999999999888542 4455555554 32 445678899998 43333
Q ss_pred ----eeeeccccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeeeeEecCC-----------CCceeEEEEecCCC
Q psy6127 213 ----VAKVFRENTDKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTINSK-----------KYGVDLIKFTHSKT 276 (515)
Q Consensus 213 ----~~~~~~~h~~~I~~l~~spd~~~l-asgs~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~ 276 (515)
.+....+|.+.+.+.+|+|||++| ++++.+++|++||..+++.+..+..+ ......+.++|++.
T Consensus 96 ~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~ 175 (432)
T d1qksa2 96 TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 175 (432)
T ss_dssp CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS
T ss_pred eEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCC
Confidence 334456788888889999999986 67888999999999999988877544 34466788999998
Q ss_pred eEEEEEeeCCCeEEEEECCCCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeEEEEecCC-----
Q psy6127 277 TAIHASTKVDATLRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNVGMIQLSG----- 349 (515)
Q Consensus 277 ~l~~~s~~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~----- 349 (515)
.++++. ..++.|.+||..+.+...... .+...+..++|+|+|+++++++. ++.+.++|.++++....+....
T Consensus 176 ~~~vs~-~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~ 254 (432)
T d1qksa2 176 EFIVNV-KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHP 254 (432)
T ss_dssp EEEEEE-TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred EEEEEE-ccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCcccccc
Confidence 877665 578999999998876544322 35567899999999998777765 5678999999888777664322
Q ss_pred -CeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCC-----ceeeecC----------------------CCCCcCeEE
Q psy6127 350 -NKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGP-----FASFKCP----------------------GERGCEWTG 400 (515)
Q Consensus 350 -~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~-----~~~~~~~----------------------~~~~~~i~~ 400 (515)
......+...+...++.. .++.+.+|+........ ....... ..+.....+
T Consensus 255 ~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~s 334 (432)
T d1qksa2 255 GRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS 334 (432)
T ss_dssp TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC
T ss_pred CcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeE
Confidence 122333433343333332 25667777654322100 0000000 001111223
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeEE
Q psy6127 401 LKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS-----TDGQVHIWNAERGYKV 475 (515)
Q Consensus 401 l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-----~dg~I~iwd~~~~~~~ 475 (515)
+++ ||++.+++++.|+.+++|++.++..+ .. +...+..++|+|||++++.+. .+|.|.|||.+++++.
T Consensus 335 v~v-pDg~~la~~s~d~~~k~w~~~~~~~l---~~---~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~ 407 (432)
T d1qksa2 335 VAV-FDIKAMTGDGSDPEFKTLPIAEWAGI---TE---GQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELK 407 (432)
T ss_dssp EEE-EEGGGCCCSSSCCCEEEECHHHHHTC---CS---SCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred EEE-EechhhcccccCCceEeccccccccc---CC---CCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEE
Confidence 444 78888888999999999987554322 12 333478899999999886553 4688999999999999
Q ss_pred EEEcC
Q psy6127 476 CVLDG 480 (515)
Q Consensus 476 ~~~~~ 480 (515)
..+.+
T Consensus 408 ~~i~~ 412 (432)
T d1qksa2 408 HVIKD 412 (432)
T ss_dssp EEECC
T ss_pred eEecC
Confidence 88875
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.92 E-value=1.2e-23 Score=201.36 Aligned_cols=272 Identities=11% Similarity=0.058 Sum_probs=208.0
Q ss_pred eCCCCcEEEEccceeeeeEeeeeccc--cCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeeeeEecCCCC-----c
Q psy6127 194 SRSSRTITKCSENLVRSYRVAKVFRE--NTDKINSLDYSSDGSLL-ISCSDDDQIIIYDCEQGTSKNTINSKKY-----G 265 (515)
Q Consensus 194 s~~~~~~i~~wd~~~~~~~~~~~~~~--h~~~I~~l~~spd~~~l-asgs~dg~i~iwd~~~~~~~~~~~~~~~-----~ 265 (515)
+++.+..+.+|| .++.++++++.. +...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+..+.. .
T Consensus 6 t~~~d~~v~v~D--~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~ 83 (337)
T d1pbyb_ 6 APARPDKLVVID--TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp EEETTTEEEEEE--TTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred EEcCCCEEEEEE--CCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccc
Confidence 566678899999 888888888764 44568899999999987 4667899999999999999988876543 3
Q ss_pred eeEEEEecCCCeEEEEEee----------CCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy6127 266 VDLIKFTHSKTTAIHASTK----------VDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWD 335 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~----------~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd 335 (515)
+..++|+|+++.++++... .+..+.+||..+++....+.. ...+..++|+|+|+++++++.+ +.+||
T Consensus 84 ~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~--~~~~d 160 (337)
T d1pbyb_ 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRD--LHVMD 160 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSS--EEEEE
T ss_pred eeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCceEEEEcCCCCEEEEEcCC--cceee
Confidence 5578999999998877532 468899999999999888874 4568899999999999988654 77899
Q ss_pred cCCCCeEEEEecCCCeeEEEECCCCCEEEE------------------------EECCCcEEEEEeecCCCCCceeeecC
Q psy6127 336 LRQPNNVGMIQLSGNKPIAAYDPEGLAFAI------------------------GVNSDSIKLYDVRSYDKGPFASFKCP 391 (515)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~------------------------g~~dg~i~i~d~~~~~~~~~~~~~~~ 391 (515)
..+++....+..........++|++..+.. +..++.+.+|+...+.. .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 236 (337)
T d1pbyb_ 161 PEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM----AMREV 236 (337)
T ss_dssp TTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE----EEEEE
T ss_pred eecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE----EEEEe
Confidence 999988888755443333333443322111 11233567777665431 11112
Q ss_pred CCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy6127 392 GERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAER 471 (515)
Q Consensus 392 ~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~ 471 (515)
..+...+..+.++|++.+++.+ ++.+++||+.+++.+..+... ..+.+++|+|||++|++++.||.|++||.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t 310 (337)
T d1pbyb_ 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP----HSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS----SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred cCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCC----CCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 3445567788999999998766 478999999999998887642 2378999999999999999999999999999
Q ss_pred CeEEEEEcC
Q psy6127 472 GYKVCVLDG 480 (515)
Q Consensus 472 ~~~~~~~~~ 480 (515)
++.+.++..
T Consensus 311 ~~~v~~i~~ 319 (337)
T d1pbyb_ 311 LEKKGQVDL 319 (337)
T ss_dssp CCEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999988764
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.91 E-value=2.6e-22 Score=192.00 Aligned_cols=269 Identities=9% Similarity=0.010 Sum_probs=200.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCC--CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC---
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSK--KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR--- 308 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~--- 308 (515)
+|+++++.|++|++||+++++.+..+..+ ...+..++|+|||+++++++ +.++.|.+||+.+++.+..+..+..
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~-~~~~~v~v~D~~t~~~~~~~~~~~~~~~ 80 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV-NKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE-TTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEE-CCCCeEEEEECCCCcEEEEEecCCCccc
Confidence 48999999999999999999999988654 35678999999999887654 5789999999999999888765543
Q ss_pred --CeEEEEEcCCCCEEEEEe------------CCCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEE
Q psy6127 309 --KVSSLNLSPVDDSFISGS------------YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKL 374 (515)
Q Consensus 309 --~v~~l~~~~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i 374 (515)
.+..++|+|+++.+++++ .++.+.+||..+++....+.....+..++|+|+|+++++++ +.+.+
T Consensus 81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~~~~ 158 (337)
T d1pbyb_ 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG--RDLHV 158 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEES--SSEEE
T ss_pred ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEc--CCcce
Confidence 345789999999988776 36789999999999999988888888999999999999875 45778
Q ss_pred EEeecCCCCCceeeecCCCC------------------CcC--eEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee
Q psy6127 375 YDVRSYDKGPFASFKCPGER------------------GCE--WTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS 434 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~------------------~~~--i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 434 (515)
||..+.+.. ......... ... ........+......+..++.+.+|+..++.......
T Consensus 159 ~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T d1pbyb_ 159 MDPEAGTLV--EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EETTTTEEE--EEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred eeeecCcEE--EEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEe
Confidence 887764311 111110000 000 0001111111111122234568999999887655433
Q ss_pred ccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC--CEEEEcCCC
Q psy6127 435 GVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS--NMAFWIPTL 512 (515)
Q Consensus 435 ~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~--dv~iW~~~~ 512 (515)
.. ....+..++++|++.+++.+ ++.|++||+.+++.+..+. +...+.+++|+|||++|++++. ++++||.+.
T Consensus 237 ~~--~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t 310 (337)
T d1pbyb_ 237 RI--MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EE--CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred cC--CCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 22 33347888999999998766 5889999999999999886 5677899999999999988874 499999875
Q ss_pred C
Q psy6127 513 S 513 (515)
Q Consensus 513 ~ 513 (515)
.
T Consensus 311 ~ 311 (337)
T d1pbyb_ 311 L 311 (337)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.90 E-value=1.8e-22 Score=193.84 Aligned_cols=272 Identities=11% Similarity=0.030 Sum_probs=197.2
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC
Q psy6127 227 LDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 227 l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~ 305 (515)
++|++++++|++++.|++|.+||+++++.+.++.. +...+.+++|+|||++++++. ..++.|++||+.+++.+..+..
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~-~~~~~v~~~d~~t~~~~~~~~~ 80 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN-NHYGDIYGIDLDTCKNTFHANL 80 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE-TTTTEEEEEETTTTEEEEEEES
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEE-CCCCcEEEEeCccCeeeeeecc
Confidence 47899999999999999999999999999998874 456788999999999887665 5789999999999998877643
Q ss_pred CC------CCeEEEEEcCCCCEEEEEe------------CCCcEEEEEcCCCCeEEE---EecCCCeeEEEECCCCCEEE
Q psy6127 306 HV------RKVSSLNLSPVDDSFISGS------------YDKTVRVWDLRQPNNVGM---IQLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 306 h~------~~v~~l~~~~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~~s~~~~~l~ 364 (515)
.. ..+..++|+|||+++++++ .++.+.+||..+++.... .........+.+++++..++
T Consensus 81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
T d1jmxb_ 81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV 160 (346)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred cccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEE
Confidence 22 2456799999999887765 477899999888765433 23344466677888887766
Q ss_pred EEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC--------------------------CCEEEEEECCCc
Q psy6127 365 IGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD--------------------------GKLILVSTNGSI 418 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~--------------------------~~~l~~~s~dg~ 418 (515)
. ++.+.+|++.+.+. ...+.. + .....+.++|+ ...++++..++.
T Consensus 161 ~---~~~~~~~~~~~~~~--~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (346)
T d1jmxb_ 161 A---GPDIYKMDVKTGKY--TVALPL---R-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231 (346)
T ss_dssp E---SSSEEEECTTTCCE--EEEECS---T-TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred e---CCcceEEEccCCCE--EEEEec---C-CCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCce
Confidence 5 35688888765431 111110 0 01112222222 233344445567
Q ss_pred EEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEE
Q psy6127 419 IRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHML 498 (515)
Q Consensus 419 i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 498 (515)
+.+||..++......... +...+..+.+++++.+++.+. ++.|++||..+++.+..+. +...+.+++|+|||+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~--~~~~~~~va~s~DG~~l 306 (346)
T d1jmxb_ 232 YLSVDLKTGKTHTQEFAD--LTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN--LDHTYYCVAFDKKGDKL 306 (346)
T ss_dssp EEEEETTTCCEEEEEEEE--CSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE--CSSCCCEEEECSSSSCE
T ss_pred EEEEECCCCceEEEEeec--ccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc--CCCCEEEEEEcCCCCEE
Confidence 888999888765544322 233378899999988887765 4579999999999998887 44579999999999999
Q ss_pred EEeeC--CEEEEcCCCC
Q psy6127 499 ASACS--NMAFWIPTLS 513 (515)
Q Consensus 499 as~~~--dv~iW~~~~~ 513 (515)
++++. ++++||....
T Consensus 307 ~v~~~d~~v~v~D~~t~ 323 (346)
T d1jmxb_ 307 YLGGTFNDLAVFNPDTL 323 (346)
T ss_dssp EEESBSSEEEEEETTTT
T ss_pred EEEeCCCcEEEEECccC
Confidence 99874 4999998753
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.89 E-value=5.6e-22 Score=190.40 Aligned_cols=274 Identities=10% Similarity=-0.015 Sum_probs=204.4
Q ss_pred eeCCCCcEEEEccceeeeeEeeeecc-ccCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeeeeEecCCC------C
Q psy6127 193 HSRSSRTITKCSENLVRSYRVAKVFR-ENTDKINSLDYSSDGSLLI-SCSDDDQIIIYDCEQGTSKNTINSKK------Y 264 (515)
Q Consensus 193 ~s~~~~~~i~~wd~~~~~~~~~~~~~-~h~~~I~~l~~spd~~~la-sgs~dg~i~iwd~~~~~~~~~~~~~~------~ 264 (515)
++++.+..+.+|| ..+.+++++++ .|...+.+++|+|||++++ +++.++.|++||+.+++.+..+.... .
T Consensus 12 ~~~~~~~~v~v~D--~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~ 89 (346)
T d1jmxb_ 12 IVTNYPNNLHVVD--VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGR 89 (346)
T ss_dssp EEEETTTEEEEEE--TTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEE
T ss_pred EEEcCCCEEEEEE--CCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCC
Confidence 3566677899999 88899999887 5667789999999999874 55678999999999999888775432 2
Q ss_pred ceeEEEEecCCCeEEEEEe----------eCCCeEEEEECCCCeeeEEecCC--CCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy6127 265 GVDLIKFTHSKTTAIHAST----------KVDATLRYLSLHDNKYVRYFPGH--VRKVSSLNLSPVDDSFISGSYDKTVR 332 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~----------~~d~~v~vwd~~~~~~~~~~~~h--~~~v~~l~~~~~~~~l~s~s~dg~i~ 332 (515)
.+..++|+|+|+.++++.. ..++.+.+||..+++....+..+ ...+..+.+++++..+++ ++.+.
T Consensus 90 ~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 166 (346)
T d1jmxb_ 90 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA---GPDIY 166 (346)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE---SSSEE
T ss_pred ceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEe---CCcce
Confidence 3567999999999887652 24788999999887765444322 344666777887776654 35689
Q ss_pred EEEcCCCCeEEEEecCCCeeEEEECCCCCEEEE--------------------------EECCCcEEEEEeecCCCCCce
Q psy6127 333 VWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAI--------------------------GVNSDSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 333 iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~--------------------------g~~dg~i~i~d~~~~~~~~~~ 386 (515)
+||+.+++....+........+.++|++..+.. +..++.+.+||..+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 242 (346)
T d1jmxb_ 167 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT---- 242 (346)
T ss_dssp EECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE----
T ss_pred EEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCce----
Confidence 999999999988876665666666676654322 22233455566554331
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHI 466 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~i 466 (515)
.......+...+..+.++|++.+++.... +.+.+||..+++.+..+... ..+.+++|+|||++|++++.||.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~----~~~~~va~s~DG~~l~v~~~d~~v~v 317 (346)
T d1jmxb_ 243 HTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLD----HTYYCVAFDKKGDKLYLGGTFNDLAV 317 (346)
T ss_dssp EEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECS----SCCCEEEECSSSSCEEEESBSSEEEE
T ss_pred EEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCC----CCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 12222345556778899998888876654 57999999999988877632 23889999999999999999999999
Q ss_pred EECCCCeEEEEEcC
Q psy6127 467 WNAERGYKVCVLDG 480 (515)
Q Consensus 467 wd~~~~~~~~~~~~ 480 (515)
||.++++.+.+++.
T Consensus 318 ~D~~t~~~i~~i~~ 331 (346)
T d1jmxb_ 318 FNPDTLEKVKNIKL 331 (346)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECccCCEEEEEEC
Confidence 99999999998875
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.87 E-value=2.7e-19 Score=174.04 Aligned_cols=285 Identities=12% Similarity=-0.005 Sum_probs=206.5
Q ss_pred CCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeeeeEecCCCCc
Q psy6127 196 SSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSKKYG 265 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~~~~ 265 (515)
+....+++|| ..+++.+.++.++..+ .++|+|||++|++++ .++.|.+||..+++.+..+..+...
T Consensus 44 ~~~~~v~v~D--~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~ 119 (373)
T d2madh_ 44 SAIIQQWVLD--AGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP 119 (373)
T ss_pred CCCceEEEEE--CCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcc
Confidence 4445688888 7788998888877654 799999999999875 3578999999999998888766544
Q ss_pred e-------eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEEcC
Q psy6127 266 V-------DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS-FISGSYDKTVRVWDLR 337 (515)
Q Consensus 266 v-------~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~s~dg~i~iwd~~ 337 (515)
. ..+.|+++++.+++.....++.+.+|+..+.+..... ....++.++|+++. +++.+.|+.+.+||..
T Consensus 120 ~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~ 195 (373)
T d2madh_ 120 RFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL----SSPTCYHIHPGAPSTFYLLCAQGGLAKTDHA 195 (373)
T ss_pred eeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe----ccceeEEEecCCCcEEEEEcCCCeEEEEEcC
Confidence 3 4578999999888877666788999998887765443 34678899999874 5788899999999999
Q ss_pred CCCeEEEEecC-------CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-------CCCCCcCeEEEEE
Q psy6127 338 QPNNVGMIQLS-------GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-------PGERGCEWTGLKF 403 (515)
Q Consensus 338 ~~~~~~~~~~~-------~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-------~~~~~~~i~~l~~ 403 (515)
.++........ .......+++++..+ ..+.++.+.+|+.............. ..........+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (373)
T d2madh_ 196 GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV-WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred CceeeEEEeeeccccCccceeeeEEECCCceEE-EecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEE
Confidence 88776654221 112335566665444 55578889998877643211111100 0011122335666
Q ss_pred cCCCCEEE----------EEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCE--EEEEeCCCcEEEEECCC
Q psy6127 404 SPDGKLIL----------VSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQF--VASGSTDGQVHIWNAER 471 (515)
Q Consensus 404 sp~~~~l~----------~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~--l~sgs~dg~I~iwd~~~ 471 (515)
+|++..++ ....++.+.+||..+++.+..+... ..+..++|+|||+. +++++.|+.|++||+.+
T Consensus 275 ~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~----~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~t 350 (373)
T d2madh_ 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred ecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCC----CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCC
Confidence 66666544 4455678999999999988877632 33789999999984 46788999999999999
Q ss_pred CeEEEEEcCCCCCCeEEEEECCC
Q psy6127 472 GYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 472 ~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
++.+.++.. +....+.+++.++
T Consensus 351 g~~~~~~~~-~g~~P~~l~~~~~ 372 (373)
T d2madh_ 351 GDQDQSTVE-LGSGPQVLSVMNE 372 (373)
T ss_pred CCEEEEECC-CCCCCcEEEEecC
Confidence 999999987 7677777776654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.9e-19 Score=171.86 Aligned_cols=280 Identities=11% Similarity=0.135 Sum_probs=195.3
Q ss_pred eeeeCCCCcEEEEccceeeee---EeeeeccccCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeeEe---cCCC
Q psy6127 191 LAHSRSSRTITKCSENLVRSY---RVAKVFRENTDKINSLDYSSDGSLLISCS-DDDQIIIYDCEQGTSKNTI---NSKK 263 (515)
Q Consensus 191 l~~s~~~~~~i~~wd~~~~~~---~~~~~~~~h~~~I~~l~~spd~~~lasgs-~dg~i~iwd~~~~~~~~~~---~~~~ 263 (515)
+..++..+..|++|+ +... +.+++ ..|.+.|.+++|+|||++|++++ .|+.|++|++........+ ..+.
T Consensus 6 v~v~~~~~~~I~v~~--~~~~~~l~~~~~-~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~ 82 (333)
T d1ri6a_ 6 VYIASPESQQIHVWN--LNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 82 (333)
T ss_dssp EEEEEGGGTEEEEEE--ECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEECCCCCcEEEEE--EcCCCCeEEEEE-EcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccC
Confidence 334667778899997 4332 33333 36789999999999999996555 5899999999865433322 2234
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCC
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQPN 340 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~ 340 (515)
..+..++|+|+|++++++. ..++.+.+|+......... ...+...+.++.++|+++.++.++. +..+.+|+.....
T Consensus 83 ~~p~~l~~spDg~~l~v~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~ 161 (333)
T d1ri6a_ 83 GSLTHISTDHQGQFVFVGS-YNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 161 (333)
T ss_dssp SCCSEEEECTTSSEEEEEE-TTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCceEEEEcCCCCEEeecc-cCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCC
Confidence 5577899999999988776 4588999999877654433 3456778889999999998887775 4579999987765
Q ss_pred eEEEE-------ecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCcee--eec---CCCCCcCeEEEEEcCCC
Q psy6127 341 NVGMI-------QLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFAS--FKC---PGERGCEWTGLKFSPDG 407 (515)
Q Consensus 341 ~~~~~-------~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~--~~~---~~~~~~~i~~l~~sp~~ 407 (515)
..... ........++|++++..++... ..+...+++........... ... ..........++++|++
T Consensus 162 ~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~ 241 (333)
T d1ri6a_ 162 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 241 (333)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred cceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEeccc
Confidence 43322 2233467899999999887665 55677888865533222111 111 11233456678999999
Q ss_pred CEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEE--ECCCCeE
Q psy6127 408 KLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIW--NAERGYK 474 (515)
Q Consensus 408 ~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iw--d~~~~~~ 474 (515)
++++... .++.+.+|++...........+......+..++|+|||++|++++ .++.|++| |.++|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred CceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence 9877655 567899999877655555544444444578899999999887765 46889998 5567754
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.86 E-value=1.1e-18 Score=169.61 Aligned_cols=289 Identities=9% Similarity=-0.047 Sum_probs=204.1
Q ss_pred cccCCcEEEEEEcCCCCEEEEEe-----CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------e
Q psy6127 218 RENTDKINSLDYSSDGSLLISCS-----DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------K 284 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs-----~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~ 284 (515)
..|.+++.+++++|||+.++... .++.|.+||..+++.+.++..+..+ .++|+|||++++++.. .
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~ 94 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGK 94 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccc
Confidence 46889999999999999987652 3467999999999999988776543 7999999999988753 3
Q ss_pred CCCeEEEEECCCCeeeEEecCCCCCe-------EEEEEcCCCCEEEEEe--CCCcEEEEEcCCCCeEEEEecCCCeeEEE
Q psy6127 285 VDATLRYLSLHDNKYVRYFPGHVRKV-------SSLNLSPVDDSFISGS--YDKTVRVWDLRQPNNVGMIQLSGNKPIAA 355 (515)
Q Consensus 285 ~d~~v~vwd~~~~~~~~~~~~h~~~v-------~~l~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 355 (515)
.++.|.+||..+++.+..+..+.... ..+.|+++++.++... .++.+.+|+....+...... ...++.
T Consensus 95 ~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 171 (373)
T d2madh_ 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS---SPTCYH 171 (373)
T ss_pred cceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec---cceeEE
Confidence 46889999999999988876665543 4578889988665544 45788999988776554443 356788
Q ss_pred ECCCCCEE-EEEECCCcEEEEEeecCCCCCceeeec-CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEe
Q psy6127 356 YDPEGLAF-AIGVNSDSIKLYDVRSYDKGPFASFKC-PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 356 ~s~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~ 433 (515)
++|+++.+ ++.+.|+.+.+|+.............. ............+++++.++ ..+.++.+.+|+...+......
T Consensus 172 ~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 250 (373)
T d2madh_ 172 IHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV-WPVYSGKILQADISAAGATNKA 250 (373)
T ss_pred EecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEE-EecCCceEEEEEcCCCeEEEEE
Confidence 99998765 677899999999988754322111111 11122223456667666554 5567888999998776533221
Q ss_pred e--ccc-------cCCCCCEEEEEecCCCEEE----------EEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCC
Q psy6127 434 S--GVL-------NNNASPLEATFTPDSQFVA----------SGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 434 ~--~~~-------~~~~~i~~~~~sp~g~~l~----------sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
. ... ........++++|++..++ +...++.+.+||..+++.+..+. +...+.+++|+||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~--~~~~~~~~a~spD 328 (373)
T d2madh_ 251 PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGHDVDAISVAQD 328 (373)
T ss_pred eeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec--CCCCeeEEEECCC
Confidence 1 110 0111234566777766544 44556789999999999999886 6678999999999
Q ss_pred CCE--EEEeeC--CEEEEcCCCCC
Q psy6127 495 YHM--LASACS--NMAFWIPTLSA 514 (515)
Q Consensus 495 ~~~--las~~~--dv~iW~~~~~~ 514 (515)
|+. +++++. .+++||.....
T Consensus 329 G~~~l~vt~~~d~~v~v~D~~tg~ 352 (373)
T d2madh_ 329 GGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CCEEEEEEeCCCCeEEEEECCCCC
Confidence 984 455554 49999987653
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=2.8e-19 Score=170.66 Aligned_cols=276 Identities=12% Similarity=0.134 Sum_probs=189.9
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeEe--cCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEe---cCCCCC
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKNTI--NSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYF---PGHVRK 309 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~---~~h~~~ 309 (515)
.+++++.|++|++|++.+...+..+ ..+.+.+..++|+|||++++++. ..|+.|++|++........+ ..+...
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~-~~d~~i~~~~i~~~~~~~~~~~~~~~~~~ 84 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGV-RPEFRVLAYRIAPDDGALTFAAESALPGS 84 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEE-TTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEE-CCCCeEEEEEEeCCCCcEEEeeecccCCC
Confidence 3577789999999999765433323 35678899999999999997665 56899999998765433222 224455
Q ss_pred eEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeEEEE---ecCCCeeEEEECCCCCEEEEEEC-CCcEEEEEeecCCCCC
Q psy6127 310 VSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNVGMI---QLSGNKPIAAYDPEGLAFAIGVN-SDSIKLYDVRSYDKGP 384 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~~~ 384 (515)
+..++|+|||++|++++. ++.+.+|+.......... .....+..+.++|+++++++++. +..+.+|+........
T Consensus 85 p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~ 164 (333)
T d1ri6a_ 85 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 164 (333)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred ceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcce
Confidence 778999999999988875 678999998877655443 33445778999999999888774 5578999987644322
Q ss_pred ceeee-cCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCce----eEEee---ccccCCCCCEEEEEecCCCEE
Q psy6127 385 FASFK-CPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNC----VQSLS---GVLNNNASPLEATFTPDSQFV 455 (515)
Q Consensus 385 ~~~~~-~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~----~~~~~---~~~~~~~~i~~~~~sp~g~~l 455 (515)
..... ...........++|++++.+++... ..+...+|+...... ..... ...........++++++++++
T Consensus 165 ~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~ 244 (333)
T d1ri6a_ 165 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 244 (333)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCce
Confidence 11111 1223445567899999999887665 456778887654321 11221 111223346778999999977
Q ss_pred EEE-eCCCcEEEEECCCCeEEEE---EcCCCCCCeEEEEECCCCCEEEEee---CCEEEEcCCC
Q psy6127 456 ASG-STDGQVHIWNAERGYKVCV---LDGDHPSAVQSLQFNPKYHMLASAC---SNMAFWIPTL 512 (515)
Q Consensus 456 ~sg-s~dg~I~iwd~~~~~~~~~---~~~~h~~~V~~l~~sp~~~~las~~---~dv~iW~~~~ 512 (515)
+.. ..++.+.+|++........ ... +...+.+++|+|||++|++++ +.+++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~ 307 (333)
T d1ri6a_ 245 YACDRTASLITVFSVSEDGSVLSKEGFQP-TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 307 (333)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEE-CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred eeecccCCeEEEEEEcCCCCEEEEEEEeC-CCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence 665 4567899998865432222 222 445678999999999888775 3399997754
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.84 E-value=2.9e-19 Score=172.34 Aligned_cols=286 Identities=13% Similarity=0.053 Sum_probs=197.2
Q ss_pred CCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeeeeEecCCC--
Q psy6127 196 SSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSKK-- 263 (515)
Q Consensus 196 ~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~~-- 263 (515)
..+..+.+|| ..+++.+.++..+..+ .++|||||++|++++ .|+.|++||..+++.+..+..+.
T Consensus 25 ~~~~~v~v~D--~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~ 100 (355)
T d2bbkh_ 25 AAVTQQFVID--GEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 100 (355)
T ss_dssp CSSEEEEEEE--TTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CCcCeEEEEE--CCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcc
Confidence 3455688898 7788888888776555 799999999888654 47899999999999888765432
Q ss_pred -----CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCC-------eEEEEEcCCCCEEEEE-eCCCc
Q psy6127 264 -----YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRK-------VSSLNLSPVDDSFISG-SYDKT 330 (515)
Q Consensus 264 -----~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~-------v~~l~~~~~~~~l~s~-s~dg~ 330 (515)
.....++|+|++..++++..+.+..+.+|+..+++.+..+..+... ...+.++++++.++.. ..++.
T Consensus 101 ~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~ 180 (355)
T d2bbkh_ 101 RFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 180 (355)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred eeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCe
Confidence 2345689999999999887667889999999999988877654322 2234445554433332 22333
Q ss_pred EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC-------CCCCcCeEEEEE
Q psy6127 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP-------GERGCEWTGLKF 403 (515)
Q Consensus 331 i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~~i~~l~~ 403 (515)
+.+++...... .....+....+.+++..++.++.++.+++|++.............. .........+++
T Consensus 181 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 256 (355)
T d2bbkh_ 181 PEITHTEVFHP----EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY 256 (355)
T ss_dssp CEEEECCCCSC----TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEE
T ss_pred EEEEecccccc----eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEE
Confidence 34444332221 1112244567788888999999999999999987542111111100 000112235889
Q ss_pred cCCCCEEEEEECC----------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC--EEEEEeCCCcEEEEECCC
Q psy6127 404 SPDGKLILVSTNG----------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ--FVASGSTDGQVHIWNAER 471 (515)
Q Consensus 404 sp~~~~l~~~s~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~--~l~sgs~dg~I~iwd~~~ 471 (515)
+|++..++....+ ..|.+||..+++.+..+..... +.+++|+|||+ ++++++.|+.|++||.++
T Consensus 257 ~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~----~~~~a~spDG~~~l~v~~~~d~~i~v~D~~t 332 (355)
T d2bbkh_ 257 HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE----IDSINVSQDEKPLLYALSTGDKTLYIHDAES 332 (355)
T ss_dssp ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE----ECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred eCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCC----EEEEEEcCCCCeEEEEEECCCCEEEEEECCC
Confidence 9999988776543 3699999999998887764322 67999999997 456677899999999999
Q ss_pred CeEEEEEcCCCCCCeEEEEECCC
Q psy6127 472 GYKVCVLDGDHPSAVQSLQFNPK 494 (515)
Q Consensus 472 ~~~~~~~~~~h~~~V~~l~~sp~ 494 (515)
++.+.++.+ +...-..+.+.++
T Consensus 333 g~~~~~i~~-~G~~p~~i~~~d~ 354 (355)
T d2bbkh_ 333 GEELRSVNQ-LGHGPQVITTADM 354 (355)
T ss_dssp CCEEEEECC-CCSSCCEEECCCC
T ss_pred CCEEEEEeC-cCCCccEEEeCCC
Confidence 999999986 5554555555544
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.82 E-value=2.4e-18 Score=165.77 Aligned_cols=276 Identities=10% Similarity=0.028 Sum_probs=193.7
Q ss_pred EEEEEEcCCCCEEEEEe-----CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEE--------eeCCCeEE
Q psy6127 224 INSLDYSSDGSLLISCS-----DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAS--------TKVDATLR 290 (515)
Q Consensus 224 I~~l~~spd~~~lasgs-----~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s--------~~~d~~v~ 290 (515)
+.-.+.+||++.++... .+++|.+||..+++.+.++..+..+ .++|+||++.+++++ +..++.|+
T Consensus 4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~ 81 (355)
T d2bbkh_ 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVE 81 (355)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence 33446689999987764 4567999999999999988766443 799999999988765 23578999
Q ss_pred EEECCCCeeeEEecCCC-------CCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCCeEEEEecCCC--------eeE
Q psy6127 291 YLSLHDNKYVRYFPGHV-------RKVSSLNLSPVDDSFISGS--YDKTVRVWDLRQPNNVGMIQLSGN--------KPI 353 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~-------~~v~~l~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~--------~~~ 353 (515)
+||..+++.+..+..+. .....++|+|+++.++.++ .+..+.+||..+++....+..... ...
T Consensus 82 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (355)
T d2bbkh_ 82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTF 161 (355)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEE
T ss_pred EEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcce
Confidence 99999999887764332 2235689999999877765 467899999999998887754432 223
Q ss_pred EEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeE-
Q psy6127 354 AAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQ- 431 (515)
Q Consensus 354 ~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~- 431 (515)
+.+++++..++... .++.+.+++..... ..+...+....+++++..++.++.++.+++|+...++...
T Consensus 162 ~~~~~dg~~~~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 231 (355)
T d2bbkh_ 162 FMHCRDGSLAKVAFGTEGTPEITHTEVFH----------PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFL 231 (355)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEECCCCS----------CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEEC
T ss_pred EEEcCCCCEEEEEecCCCeEEEEeccccc----------ceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEE
Confidence 55666666555432 33444444443321 1222234456778888899999999999999998775422
Q ss_pred -Eeecccc-------CCCCCEEEEEecCCCEEEEEeCC----------CcEEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 432 -SLSGVLN-------NNASPLEATFTPDSQFVASGSTD----------GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 432 -~~~~~~~-------~~~~i~~~~~sp~g~~l~sgs~d----------g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
....+.. .......+++++++..++....+ +.|.+||..+++.+..+. +...+.+++|+|
T Consensus 232 ~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~--~~~~~~~~a~sp 309 (355)
T d2bbkh_ 232 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--MGHEIDSINVSQ 309 (355)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECC
T ss_pred eccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec--CCCCEEEEEEcC
Confidence 1111100 01123568899999988776543 369999999999998887 445688999999
Q ss_pred CCC--EEEEeeC--CEEEEcCCCC
Q psy6127 494 KYH--MLASACS--NMAFWIPTLS 513 (515)
Q Consensus 494 ~~~--~las~~~--dv~iW~~~~~ 513 (515)
||+ +++++++ .+++||....
T Consensus 310 DG~~~l~v~~~~d~~i~v~D~~tg 333 (355)
T d2bbkh_ 310 DEKPLLYALSTGDKTLYIHDAESG 333 (355)
T ss_dssp SSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCCeEEEEEECCCCEEEEEECCCC
Confidence 997 3455543 4999998764
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.70 E-value=4.5e-16 Score=150.96 Aligned_cols=272 Identities=13% Similarity=-0.038 Sum_probs=185.5
Q ss_pred CCCCcEEEEccceeeeeEeeeeccccCCcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeeeeEecCCCC
Q psy6127 195 RSSRTITKCSENLVRSYRVAKVFRENTDKINSLDYSSDGSLLISCS----------DDDQIIIYDCEQGTSKNTINSKKY 264 (515)
Q Consensus 195 ~~~~~~i~~wd~~~~~~~~~~~~~~h~~~I~~l~~spd~~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~~~ 264 (515)
.++...++++| ...++.+.+..++... .++|+|||+++++++ .|+.|++||..+++....+..+..
T Consensus 42 ~~g~~~~~~~d--~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~ 117 (368)
T d1mdah_ 42 FAGTTENWVSC--AGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp TCSSEEEEEEE--TTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred CCCcceEEEEe--CCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCcc
Confidence 44455577777 6678888888877765 588999999998765 367899999999999887754322
Q ss_pred -------ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy6127 265 -------GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLR 337 (515)
Q Consensus 265 -------~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~ 337 (515)
....++|+|||++++++. ..++.+.+||+.+++....+..+..... +......++..+.||++.++++.
T Consensus 118 ~~~~~g~~p~~~a~SpDGk~l~va~-~~~~~v~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~ 193 (368)
T d1mdah_ 118 PRFSVGPRVHIIGNCASSACLLFFL-FGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEE-CSSSCEEEEEETTTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECC
T ss_pred ceecccCCccceEECCCCCEEEEEe-CCCCeEEEEECCCCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEec
Confidence 234689999999998876 3589999999999999888766544321 11223466777788888888876
Q ss_pred CCCeEEEEe-------cCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeec-------CCCCCcCeEEEEE
Q psy6127 338 QPNNVGMIQ-------LSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKC-------PGERGCEWTGLKF 403 (515)
Q Consensus 338 ~~~~~~~~~-------~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~-------~~~~~~~i~~l~~ 403 (515)
......... .........+.+++..+.. ..+.+.+++.............. ..........+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~ 271 (368)
T d1mdah_ 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp SSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred CCceeeeeeecccccccccceeecccccCcEEEEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEE
Confidence 654433221 1112345667777765544 35566667665433111000000 0000111235889
Q ss_pred cCCCCEEEEEECC---------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-E-EEEEeCCCcEEEEECCCC
Q psy6127 404 SPDGKLILVSTNG---------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-F-VASGSTDGQVHIWNAERG 472 (515)
Q Consensus 404 sp~~~~l~~~s~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~-l~sgs~dg~I~iwd~~~~ 472 (515)
+|++..++....+ ..+.+||..+++.+..+.... .+..++|+|||+ + ++++..|+.|++||..++
T Consensus 272 ~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~----~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tg 347 (368)
T d1mdah_ 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred cCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCC----ceeEEEECCCCCEEEEEEeCCCCeEEEEECCCC
Confidence 9999887765432 358999999999888776432 277899999997 3 456678899999999999
Q ss_pred eEEEEEcC
Q psy6127 473 YKVCVLDG 480 (515)
Q Consensus 473 ~~~~~~~~ 480 (515)
+.+.+++.
T Consensus 348 k~~~~i~~ 355 (368)
T d1mdah_ 348 QDQSSVEL 355 (368)
T ss_dssp EEEEECCC
T ss_pred CEEEEEEC
Confidence 99999985
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.67 E-value=7.6e-16 Score=149.34 Aligned_cols=286 Identities=9% Similarity=-0.039 Sum_probs=187.9
Q ss_pred cCCcEEEEEEcCCCCEEEE---EeCCC--eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEe--------eCC
Q psy6127 220 NTDKINSLDYSSDGSLLIS---CSDDD--QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHAST--------KVD 286 (515)
Q Consensus 220 h~~~I~~l~~spd~~~las---gs~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~--------~~d 286 (515)
+.++...++..++++.... ...++ .+.+||..+++.+..+..+..+ .++|+|+++.+++++. +.|
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d 95 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRT 95 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccC
Confidence 4455555667788875322 23344 4777799999999888776654 5899999999988762 347
Q ss_pred CeEEEEECCCCeeeEEecCCCC-------CeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEEEEecCCCeeEEEECC
Q psy6127 287 ATLRYLSLHDNKYVRYFPGHVR-------KVSSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVGMIQLSGNKPIAAYDP 358 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~~~~h~~-------~v~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~ 358 (515)
+.|.+||..+++.+..+..+.. ....++|+|||++++.+. .++.+.+||+.+++....+..+..... ...
T Consensus 96 ~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~--~~~ 173 (368)
T d1mdah_ 96 DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI--HPG 173 (368)
T ss_dssp EEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC--EEE
T ss_pred CeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE--ccC
Confidence 7899999999998877654322 234689999999888776 579999999999998888765542211 111
Q ss_pred CCCEEEEEECCCcEEEEEeecCCCCCceee-ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEee--c
Q psy6127 359 EGLAFAIGVNSDSIKLYDVRSYDKGPFASF-KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLS--G 435 (515)
Q Consensus 359 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~--~ 435 (515)
....++..+.||.+..++............ .....+...+....+.+++..+... ++.+++++...+....... .
T Consensus 174 ~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~ 251 (368)
T d1mdah_ 174 AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDG 251 (368)
T ss_dssp ETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCS
T ss_pred CCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeeccc
Confidence 234555566777777777665432221111 1122333444567788887666543 4556777765554332111 0
Q ss_pred cc-------cCCCCCEEEEEecCCCEEEEEeCC---------CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCE--
Q psy6127 436 VL-------NNNASPLEATFTPDSQFVASGSTD---------GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHM-- 497 (515)
Q Consensus 436 ~~-------~~~~~i~~~~~sp~g~~l~sgs~d---------g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~-- 497 (515)
.. ........++++|++..++....+ ..|.+||..+++.+..+. +...+.+++|+|||+.
T Consensus 252 ~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~--~~~~~~~~a~spDG~~~l 329 (368)
T d1mdah_ 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS--NGHDSDAIIAAQDGASDN 329 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE--EEEEECEEEECCSSSCEE
T ss_pred ccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec--CCCceeEEEECCCCCEEE
Confidence 00 001113458899999877665322 359999999999988876 4467889999999973
Q ss_pred EEEeeC--CEEEEcCCCC
Q psy6127 498 LASACS--NMAFWIPTLS 513 (515)
Q Consensus 498 las~~~--dv~iW~~~~~ 513 (515)
++++.+ .+++||....
T Consensus 330 y~s~~~~~~v~v~D~~tg 347 (368)
T d1mdah_ 330 YANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEETTTTEEEEEESSSC
T ss_pred EEEeCCCCeEEEEECCCC
Confidence 344443 4999998654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.65 E-value=2.8e-15 Score=145.38 Aligned_cols=261 Identities=14% Similarity=0.096 Sum_probs=180.0
Q ss_pred EEEEeCCCeEEEEECCCCeeeeEecC------------------------------CCCceeEEEEecCCCeEEEEEeeC
Q psy6127 236 LISCSDDDQIIIYDCEQGTSKNTINS------------------------------KKYGVDLIKFTHSKTTAIHASTKV 285 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~l~~~s~~~ 285 (515)
++|++.+|+|++|++.+++.++++.. |........++|||+++++.. ..
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d-~~ 92 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFIND-KA 92 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEE-TT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEc-CC
Confidence 56778899999999999988877632 122234445578998887765 57
Q ss_pred CCeEEEEECCCCeeeEEec-CCCCCeEEEEEcCCCC--EEEEEeCCC-----------------cEEEEEcCCCCeEEEE
Q psy6127 286 DATLRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVDD--SFISGSYDK-----------------TVRVWDLRQPNNVGMI 345 (515)
Q Consensus 286 d~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~--~l~s~s~dg-----------------~i~iwd~~~~~~~~~~ 345 (515)
+++|.++|+++++....+. .+...+..++|+|+++ +++..+.+. .+..+|..+.+....+
T Consensus 93 ~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI 172 (441)
T d1qnia2 93 NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV 172 (441)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence 8999999999999877664 4677899999999998 454444432 2456899999988888
Q ss_pred ecCCCeeEEEECCCCCEEEEEECCC---------------cEEEEEeec------------------------CCCCCce
Q psy6127 346 QLSGNKPIAAYDPEGLAFAIGVNSD---------------SIKLYDVRS------------------------YDKGPFA 386 (515)
Q Consensus 346 ~~~~~~~~~~~s~~~~~l~~g~~dg---------------~i~i~d~~~------------------------~~~~~~~ 386 (515)
........+.++|+|+++++.+.+. .+.+.+... .......
T Consensus 173 ~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~ 252 (441)
T d1qnia2 173 IVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTR 252 (441)
T ss_dssp EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEE
T ss_pred ecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEE
Confidence 7777788999999999998887542 122222110 0001111
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEE-ECCCcEEEEECCCCce--------eEEeeccccCCCCCEEEEEecCCCEEEE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVS-TNGSIIRLFDAFNGNC--------VQSLSGVLNNNASPLEATFTPDSQFVAS 457 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~-s~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~i~~~~~sp~g~~l~s 457 (515)
.+. ... ....+.++|||++++++ ..++++.+||+.+... ...+.......-.....+|+++|..+.+
T Consensus 253 ~IP---vgk-sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts 328 (441)
T d1qnia2 253 YIP---VPK-NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTT 328 (441)
T ss_dssp EEC---CBS-SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEE
T ss_pred EEe---CCC-CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEc
Confidence 111 111 23479999999988654 5789999999865321 1112222222222466789999988888
Q ss_pred EeCCCcEEEEECCC----------CeEEEEE-----cCCCCCCeEEEEECCCCCEEEEee
Q psy6127 458 GSTDGQVHIWNAER----------GYKVCVL-----DGDHPSAVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 458 gs~dg~I~iwd~~~----------~~~~~~~-----~~~h~~~V~~l~~sp~~~~las~~ 502 (515)
...|..|..|++.. ...+..+ .+ |...+.+.+++|||++|++++
T Consensus 329 ~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~G-H~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 329 LFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPG-HNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCCCEEEEEE
T ss_pred ccccceEEEeccchhhhhhccCCCceeEeccccccCCC-CCccccccccCCCCcEEEecC
Confidence 89999999999741 1234444 24 666677788999999999995
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.58 E-value=2.6e-13 Score=135.71 Aligned_cols=140 Identities=13% Similarity=0.126 Sum_probs=111.2
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecC-----CCCceeEEEEecCCCeEEEEEe-------eCCCeEEEEE
Q psy6127 226 SLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINS-----KKYGVDLIKFTHSKTTAIHAST-------KVDATLRYLS 293 (515)
Q Consensus 226 ~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~s~-------~~d~~v~vwd 293 (515)
.+.|.+|++++.. .|+.+.+||+.+++....+.. +...|.++.|+||++++++++. +.++.+.+||
T Consensus 21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d 98 (470)
T d2bgra1 21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (470)
T ss_dssp CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence 4679999987764 578899999999988765543 4577999999999999998864 2357899999
Q ss_pred CCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec-------------------CCCeeEE
Q psy6127 294 LHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL-------------------SGNKPIA 354 (515)
Q Consensus 294 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-------------------~~~~~~~ 354 (515)
+.+++. ..+..|...+..+.|+|||+.+|.. .++.+.+|+..+++..+.... .+....+
T Consensus 99 ~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~ 176 (470)
T d2bgra1 99 LNKRQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (470)
T ss_dssp TTTTEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred CCCCcc-cccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcccc
Confidence 999875 4577899999999999999999985 567899999998876654321 1223457
Q ss_pred EECCCCCEEEEEECC
Q psy6127 355 AYDPEGLAFAIGVNS 369 (515)
Q Consensus 355 ~~s~~~~~l~~g~~d 369 (515)
.|||||+.|+....|
T Consensus 177 ~wSPDGk~ia~~~~d 191 (470)
T d2bgra1 177 WWSPNGTFLAYAQFN 191 (470)
T ss_dssp EECTTSSEEEEEEEE
T ss_pred EECCCCCccceeEec
Confidence 899999999987644
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.58 E-value=1.4e-13 Score=137.73 Aligned_cols=123 Identities=13% Similarity=0.047 Sum_probs=95.7
Q ss_pred EEEEccceeeeeEeee-----eccccCCcEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCeeeeEecCCCCc
Q psy6127 200 ITKCSENLVRSYRVAK-----VFRENTDKINSLDYSSDGSLLISCSD---------DDQIIIYDCEQGTSKNTINSKKYG 265 (515)
Q Consensus 200 ~i~~wd~~~~~~~~~~-----~~~~h~~~I~~l~~spd~~~lasgs~---------dg~i~iwd~~~~~~~~~~~~~~~~ 265 (515)
.+.+|+ +.+++... ++..|...|.++.|||||++|+.++. ++.+.+||+++++. ..+..+...
T Consensus 37 ~~~~~~--~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-~~l~~~~~~ 113 (470)
T d2bgra1 37 NILVFN--AEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-ITEERIPNN 113 (470)
T ss_dssp CEEEEE--TTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSCCCTT
T ss_pred cEEEEE--CCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc-cccccCCcc
Confidence 366777 55554433 45667789999999999999998854 46789999998774 557888899
Q ss_pred eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCC------------------CCCeEEEEEcCCCCEEEEEeC
Q psy6127 266 VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGH------------------VRKVSSLNLSPVDDSFISGSY 327 (515)
Q Consensus 266 v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h------------------~~~v~~l~~~~~~~~l~s~s~ 327 (515)
+..+.|+|||+.+++.. ++.+++|+..+++..+....+ .+....+.|+|||+.|+....
T Consensus 114 ~~~~~~SPDG~~ia~~~---~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~ 190 (470)
T d2bgra1 114 TQWVTWSPVGHKLAYVW---NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF 190 (470)
T ss_dssp EEEEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred ccccccccCcceeeEee---cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEe
Confidence 99999999999999875 889999999988776544322 223456889999999988765
Q ss_pred C
Q psy6127 328 D 328 (515)
Q Consensus 328 d 328 (515)
|
T Consensus 191 d 191 (470)
T d2bgra1 191 N 191 (470)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.55 E-value=1.2e-13 Score=133.92 Aligned_cols=239 Identities=12% Similarity=0.063 Sum_probs=165.5
Q ss_pred cCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeeEecC-CCCceeEEEEecCCCeEEEEEeeCCC----------
Q psy6127 220 NTDKINSLDYSSDGSLLISCS-DDDQIIIYDCEQGTSKNTINS-KKYGVDLIKFTHSKTTAIHASTKVDA---------- 287 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs-~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~~~d~---------- 287 (515)
|........++|||++|+... .+++|.++|+.+++....+.. +...+..++|+|+++..+++..+.+.
T Consensus 70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~ 149 (441)
T d1qnia2 70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDF 149 (441)
T ss_dssp CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccc
Confidence 445566677789999986664 678999999999998887753 46789999999999987666543322
Q ss_pred -------eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC--------------------------------
Q psy6127 288 -------TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD-------------------------------- 328 (515)
Q Consensus 288 -------~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-------------------------------- 328 (515)
.+..+|..+.+...+.... .....+.++|+|+++++++.+
T Consensus 150 ~~~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~d 228 (441)
T d1qnia2 150 SLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKA 228 (441)
T ss_dssp CGGGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHT
T ss_pred ccccccceEEeecCccceeeEEEecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecC
Confidence 2355788887776665432 457889999999988877643
Q ss_pred ---------CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEE-EECCCcEEEEEeecCCC------CCceeeecCC
Q psy6127 329 ---------KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAI-GVNSDSIKLYDVRSYDK------GPFASFKCPG 392 (515)
Q Consensus 329 ---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-g~~dg~i~i~d~~~~~~------~~~~~~~~~~ 392 (515)
+.+.+++....+.+..+........+.++|||+++++ +..++++.+||+..... .....+....
T Consensus 229 Gk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~ 308 (441)
T d1qnia2 229 GNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEP 308 (441)
T ss_dssp TCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECC
T ss_pred CCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeec
Confidence 3445555556666777777777788999999998755 56799999999876321 1111121111
Q ss_pred CCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC----------CceeEEeecc--ccCCCCCEEEEEecCCCEEEEEe
Q psy6127 393 ERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN----------GNCVQSLSGV--LNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~----------~~~~~~~~~~--~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
...-.....+|+++|....+..-|..|..|++.. ...+..+..| .+|...+.+.+++|||+||++++
T Consensus 309 ~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 309 ELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp BCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEE
T ss_pred ccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecC
Confidence 2222334678999998888888999999999741 1223333222 12323355667999999999994
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.34 E-value=1.4e-10 Score=105.65 Aligned_cols=240 Identities=10% Similarity=0.017 Sum_probs=155.6
Q ss_pred CceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEE
Q psy6127 264 YGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVG 343 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 343 (515)
.....+++.++|+..+ +..+..+.+..++............-......++++++++.+++....+.+++++-.+.....
T Consensus 14 ~~P~~vavd~dG~i~v-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~ 92 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYV-TSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL 92 (260)
T ss_dssp CCEEEEEECTTCCEEE-EECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred CCCCEEEEcCCCCEEE-EEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeee
Confidence 3468899999987444 443456777777665443332222222346788999999988777776777776655555443
Q ss_pred EEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy6127 344 MIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFD 423 (515)
Q Consensus 344 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd 423 (515)
.......+..++++++++++++-..+..+..++...... ... .........+++++|+++.+++...++.|..++
T Consensus 93 ~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~----~~~-~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d 167 (260)
T d1rwia_ 93 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ----TVL-PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 167 (260)
T ss_dssp CCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC----EEC-CCCSCCSCCEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eeeeeeecccccccccceeEeecccccccccccccccee----eee-eecccCCcceeeecCCCCEeeeccccccccccc
Confidence 333334578899999999888766666677666544221 111 111223345899999999888877888899999
Q ss_pred CCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeC
Q psy6127 424 AFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACS 503 (515)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~ 503 (515)
............ ....+..+++.++|+++++....+.|..++...... ..+....-....+|+++++|.++++-.+
T Consensus 168 ~~~~~~~~~~~~---~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~~~~~~P~~i~~d~~g~l~vad~~ 243 (260)
T d1rwia_ 168 AESNNQVVLPFT---DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDSDRTVYVADRG 243 (260)
T ss_dssp TTTCCEEECCCS---SCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCCCSCCCEEEEEECTTCCEEEEEGG
T ss_pred cccceeeeeecc---ccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEccCCCCCeEEEEEeCCCCEEEEECC
Confidence 765443322111 223368899999999888887888898888654432 2222223456789999999998877666
Q ss_pred CEEEEcCCCC
Q psy6127 504 NMAFWIPTLS 513 (515)
Q Consensus 504 dv~iW~~~~~ 513 (515)
+-+|+.++..
T Consensus 244 ~~rI~~i~~~ 253 (260)
T d1rwia_ 244 NDRVVKLTSL 253 (260)
T ss_dssp GTEEEEECCC
T ss_pred CCEEEEEeCC
Confidence 6677776654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.33 E-value=3.1e-09 Score=97.63 Aligned_cols=242 Identities=11% Similarity=0.153 Sum_probs=171.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCC------CCceeEEEEecCCCeEEEEEeeCCCeEEEEECC
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK------KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLH 295 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~ 295 (515)
.....++++|+|+.+++-..++.|++||.+ |+.+..+... ......+++.++....+++..+.++.|..++.
T Consensus 23 ~~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 100 (279)
T d1q7fa_ 23 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ- 100 (279)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-
T ss_pred CCccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-
Confidence 356899999999988887778999999965 7776666321 22345677777766666665556778888886
Q ss_pred CCeeeEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEec---CCCeeEEEECCCCCEEEEEECCCc
Q psy6127 296 DNKYVRYFP-GHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQL---SGNKPIAAYDPEGLAFAIGVNSDS 371 (515)
Q Consensus 296 ~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~s~~~~~l~~g~~dg~ 371 (515)
.++....+. ........+++.+++..+++....+.+.+++.. ++.+..+.. ......++++++++.+++....+.
T Consensus 101 ~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~ 179 (279)
T d1q7fa_ 101 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 179 (279)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccc
Confidence 455555553 345678899999999988887777888888854 555665532 234667899999998888888899
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN-GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
|++||.... ....+. .........+++++|+|+.+++-.. ++.|.+|+ .+|+.+..+..... ......+++.|
T Consensus 180 V~~~d~~G~---~~~~~g-~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~-~~~p~~vav~~ 253 (279)
T d1q7fa_ 180 VKVFNYEGQ---YLRQIG-GEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVK-HAQCFDVALMD 253 (279)
T ss_dssp EEEEETTCC---EEEEES-CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSC-CSCEEEEEEET
T ss_pred eeeeecCCc---eeeeec-ccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCC-CCCEeEEEEeC
Confidence 999986542 111111 1233445679999999997766443 45699998 57887777754332 22478999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCe
Q psy6127 451 DSQFVASGSTDGQVHIWNAERGY 473 (515)
Q Consensus 451 ~g~~l~sgs~dg~I~iwd~~~~~ 473 (515)
+|.+++ ++.++.|++|......
T Consensus 254 dG~l~V-~~~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 254 DGSVVL-ASKDYRLYIYRYVQLA 275 (279)
T ss_dssp TTEEEE-EETTTEEEEEECSCCC
T ss_pred CCcEEE-EeCCCeEEEEEeeeec
Confidence 997555 5578999999987653
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=2.6e-09 Score=97.30 Aligned_cols=236 Identities=13% Similarity=0.155 Sum_probs=149.4
Q ss_pred eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCC--eEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCE
Q psy6127 244 QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDA--TLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDS 321 (515)
Q Consensus 244 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~--~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 321 (515)
.|.|.|.. |.....+..+...+...+|+|||+.+++... ..+ .+.+.+...+... .+..+.+......|+|+|+.
T Consensus 20 ~l~i~d~d-G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~ 96 (269)
T d2hqsa1 20 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTF-ESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSK 96 (269)
T ss_dssp EEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEEC-TTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSE
T ss_pred EEEEEcCC-CCCcEEEecCCCceeeeEECCCCCEEEEEEe-eccCcceeeeecccCcee-EEeeeecccccceecCCCCe
Confidence 57777876 5455555555677889999999999998863 233 4666676665544 34457788899999999998
Q ss_pred EEEEeC-CCc--EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 322 FISGSY-DKT--VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 322 l~s~s~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
++.... ++. +..+.....................+++++..+...+ .+|...+|........ ..........
T Consensus 97 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~----~~~~~~~~~~ 172 (269)
T d2hqsa1 97 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA----PQRITWEGSQ 172 (269)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC----CEECCCSSSE
T ss_pred eeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeeccccc----ceeeeccccc
Confidence 876654 333 3333333343333334444455667888877665554 4555555554432211 1111233445
Q ss_pred eEEEEEcCCCCEEEEEECC-C--cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC---CCcEEEEECCC
Q psy6127 398 WTGLKFSPDGKLILVSTNG-S--IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST---DGQVHIWNAER 471 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~---dg~I~iwd~~~ 471 (515)
.....|+|+++.++..+.+ + .+.+.+...+.. . .... ........|+|||+.|+..+. ...++++++..
T Consensus 173 ~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~---~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg 247 (269)
T d2hqsa1 173 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-Q-VLSS---TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 247 (269)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-E-ECCC---SSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred ccccccccccceeEEEeecCCceeeeEeecccccc-e-Eeec---CccccceEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 6678999999998876654 3 344555555443 2 2221 223578899999998875553 34689999987
Q ss_pred CeEEEEEcCCCCCCeEEEEECC
Q psy6127 472 GYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 472 ~~~~~~~~~~h~~~V~~l~~sp 493 (515)
+... .+.. ..+.+...+|+|
T Consensus 248 ~~~~-~lt~-~~g~~~~p~WSP 267 (269)
T d2hqsa1 248 RFKA-RLPA-TDGQVKFPAWSP 267 (269)
T ss_dssp CCEE-ECCC-SSSEEEEEEECC
T ss_pred CCEE-EEeC-CCCcEEeEEeCC
Confidence 6654 4544 567788999999
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.30 E-value=1.7e-09 Score=103.58 Aligned_cols=252 Identities=10% Similarity=0.101 Sum_probs=152.1
Q ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eeeeEe-cCCCCceeEEEEecCCCeEEEEEee-CCCeEEEEECCC
Q psy6127 220 NTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQG-TSKNTI-NSKKYGVDLIKFTHSKTTAIHASTK-VDATLRYLSLHD 296 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~-~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~~-~d~~v~vwd~~~ 296 (515)
....+.-|+|+|++++|+++.. +.+..|.+... ...... .........++++++++.+++++.. ..+.|..+.+..
T Consensus 38 ~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~ 116 (365)
T d1jofa_ 38 QDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccC
Confidence 3455667999999999988765 56777776532 222211 1122345567788888766555432 245555544321
Q ss_pred C-------------ee---eE-EecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCeEE---EE---ecCCCee
Q psy6127 297 N-------------KY---VR-YFPGHVRKVSSLNLSPVDDSFISGSY-DKTVRVWDLRQPNNVG---MI---QLSGNKP 352 (515)
Q Consensus 297 ~-------------~~---~~-~~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~---~~---~~~~~~~ 352 (515)
. +. .. .-......+.++.|+|||+++++++. ...|.+|+......+. .. .......
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr 196 (365)
T d1jofa_ 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceE
Confidence 1 10 11 11122335789999999998887764 4578888765433222 11 2234578
Q ss_pred EEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeec--------------CCCCCcCeEEEEEcCCCCEEEEEEC--
Q psy6127 353 IAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKC--------------PGERGCEWTGLKFSPDGKLILVSTN-- 415 (515)
Q Consensus 353 ~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~--------------~~~~~~~i~~l~~sp~~~~l~~~s~-- 415 (515)
.++|+|+++++.+.. .+++|.+|++............. ..........+.++|+|++++++..
T Consensus 197 ~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~ 276 (365)
T d1jofa_ 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccC
Confidence 899999999886655 57899999997654322211110 0111223457899999999988753
Q ss_pred ----CCcEEEEECCCCceeEE---eeccccCCCCCEEEEEec-CCCEEEEEe-CCCcEEEEECCCC
Q psy6127 416 ----GSIIRLFDAFNGNCVQS---LSGVLNNNASPLEATFTP-DSQFVASGS-TDGQVHIWNAERG 472 (515)
Q Consensus 416 ----dg~i~iwd~~~~~~~~~---~~~~~~~~~~i~~~~~sp-~g~~l~sgs-~dg~I~iwd~~~~ 472 (515)
...|..|++.....+.. +............++++| +|++|+++. .++.|.+|++...
T Consensus 277 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 12377777654322221 111111223367899998 799887775 6789999987654
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.28 E-value=2.3e-09 Score=102.65 Aligned_cols=247 Identities=8% Similarity=-0.016 Sum_probs=145.1
Q ss_pred CCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eeeEEe-cCCCCCeEEEEEcCCCCEEE--EEe-CCCcEEEEEc
Q psy6127 262 KKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYVRYF-PGHVRKVSSLNLSPVDDSFI--SGS-YDKTVRVWDL 336 (515)
Q Consensus 262 ~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~~~~-~~h~~~v~~l~~~~~~~~l~--s~s-~dg~i~iwd~ 336 (515)
....+..++|+|+++.++++. .+.+..|.+... ...... .........++++++++.++ ++. ..++|..+.+
T Consensus 38 ~~~~~s~la~s~d~~~ly~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~ 114 (365)
T d1jofa_ 38 QDEPISWMTFDHERKNIYGAA---MKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEE---BTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCCEEEEcCCCCEEEEEe---CCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEc
Confidence 345567899999999988775 456777766532 222111 11223455677888887433 222 2345554443
Q ss_pred CC------------C-Ce---EEEE--ecCCCeeEEEECCCCCEEEEEEC-CCcEEEEEeecCCCCCceeeecCCCCCcC
Q psy6127 337 RQ------------P-NN---VGMI--QLSGNKPIAAYDPEGLAFAIGVN-SDSIKLYDVRSYDKGPFASFKCPGERGCE 397 (515)
Q Consensus 337 ~~------------~-~~---~~~~--~~~~~~~~~~~s~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 397 (515)
.. . .. .... +....+..+.|+|+|++++++.. ...|.+|+.....................
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~g 194 (365)
T d1jofa_ 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred cCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCc
Confidence 21 1 11 1111 12234678999999998888764 45788888654321111111112233456
Q ss_pred eEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeE--Eeeccc--------------cCCCCCEEEEEecCCCEEEEEeC
Q psy6127 398 WTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQ--SLSGVL--------------NNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 398 i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~--~~~~~~--------------~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
.+.++|+|+++++++.. .+++|.+|++..++... ...... ........+.++|||++|+++..
T Consensus 195 Pr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr 274 (365)
T d1jofa_ 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcc
Confidence 78999999999887766 57899999987654321 111100 01112457899999999988742
Q ss_pred ------CCcEEEEECCCC-eEE---E--EEcCCCCCCeEEEEECC-CCCEEEEee---CCEEEEcCCC
Q psy6127 461 ------DGQVHIWNAERG-YKV---C--VLDGDHPSAVQSLQFNP-KYHMLASAC---SNMAFWIPTL 512 (515)
Q Consensus 461 ------dg~I~iwd~~~~-~~~---~--~~~~~h~~~V~~l~~sp-~~~~las~~---~dv~iW~~~~ 512 (515)
.+.|..|++... ... . .... ......+++++| +|++|+.++ +++.+|+++.
T Consensus 275 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~ 341 (365)
T d1jofa_ 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT-SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSS-CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred cCCCccceEEEEEEecCCCceeeEeEeeEEEc-CCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeC
Confidence 123777776543 211 1 1111 334567899998 899887775 3499998653
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=1e-08 Score=93.25 Aligned_cols=225 Identities=12% Similarity=0.120 Sum_probs=141.7
Q ss_pred eeeccccCCcEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 214 AKVFRENTDKINSLDYSSDGSLLISCSDDD---QIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 214 ~~~~~~h~~~I~~l~~spd~~~lasgs~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+.+..+...+.+.+|||||+.||...... .+.+.+...+.. ..+..+........|+|++..++.... .++...
T Consensus 31 ~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~i~~~~~-~~~~~~ 108 (269)
T d2hqsa1 31 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALS-KTGSLN 108 (269)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSEEEEEEC-TTSSCE
T ss_pred cEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCCeeeEeee-cCCccc
Confidence 344455677789999999999999876543 466677665544 445556778889999999999988774 333332
Q ss_pred --EEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEE-eCCC--cEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEE
Q psy6127 291 --YLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISG-SYDK--TVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAI 365 (515)
Q Consensus 291 --vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 365 (515)
.+....... .....+........+++++..++.. ..++ .|...++..+................|+|+++.++.
T Consensus 109 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 187 (269)
T d2hqsa1 109 LYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVM 187 (269)
T ss_dssp EEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEE
T ss_pred eeecccccccc-eeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeEE
Confidence 333333332 3333344555666788877755444 4455 456667666655544444455667899999999888
Q ss_pred EECC-CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCceeEEeeccccCCC
Q psy6127 366 GVNS-DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN---GSIIRLFDAFNGNCVQSLSGVLNNNA 441 (515)
Q Consensus 366 g~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~ 441 (515)
.+.+ +...+|........ . .. ...........|||||++|+..+. ...++++++..+... .+... ..
T Consensus 188 ~~~~~~~~~i~~~~~~~~~-~-~~---~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~-~lt~~---~g 258 (269)
T d2hqsa1 188 VSSNGGQQHIAKQDLATGG-V-QV---LSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA-RLPAT---DG 258 (269)
T ss_dssp EEECSSCEEEEEEETTTCC-E-EE---CCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE-ECCCS---SS
T ss_pred EeecCCceeeeEeeccccc-c-eE---eecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE-EEeCC---CC
Confidence 7654 45555555443221 1 11 122334567899999999886653 346889998776543 33332 22
Q ss_pred CCEEEEEec
Q psy6127 442 SPLEATFTP 450 (515)
Q Consensus 442 ~i~~~~~sp 450 (515)
.+...+|||
T Consensus 259 ~~~~p~WSP 267 (269)
T d2hqsa1 259 QVKFPAWSP 267 (269)
T ss_dssp EEEEEEECC
T ss_pred cEEeEEeCC
Confidence 367788988
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.24 E-value=9.4e-09 Score=96.00 Aligned_cols=241 Identities=11% Similarity=0.102 Sum_probs=155.4
Q ss_pred EEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCeeeeEecCC----CCceeEEEEecCCCeEEEEEeeCCCeEEEE
Q psy6127 224 INSLDYSSDGSLLISCSD-------DDQIIIYDCEQGTSKNTINSK----KYGVDLIKFTHSKTTAIHASTKVDATLRYL 292 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~-------dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~s~~~d~~v~vw 292 (515)
.-.++|.|+|++.++... +|+|..||..++......... ......++|.++++.++++. ..+.+..+
T Consensus 20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad--~~~~i~~~ 97 (314)
T d1pjxa_ 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD--MRLGLLVV 97 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE--TTTEEEEE
T ss_pred CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEE--CCCeEEEE
Confidence 456789999997776433 467889998877654433221 23356899999998888775 46678888
Q ss_pred ECCCCeeeEEecCCC----CCeEEEEEcCCCCEEEEEeC---------------CCcEEEEEcCCCCeEEEEecCCCeeE
Q psy6127 293 SLHDNKYVRYFPGHV----RKVSSLNLSPVDDSFISGSY---------------DKTVRVWDLRQPNNVGMIQLSGNKPI 353 (515)
Q Consensus 293 d~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~s~s~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~ 353 (515)
+.+.+.......... ...+.+++.++|+..++-.. +|.|..++.. ++.......-...+.
T Consensus 98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~~~~~~pNG 176 (314)
T d1pjxa_ 98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNG 176 (314)
T ss_dssp ETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEE
T ss_pred eCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEeeCCcceeee
Confidence 977654332221111 13578999999987776432 2344444432 333333332233567
Q ss_pred EEECCCCC-----EEEEEECCCcEEEEEeecCCCCCcee-e-ecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy6127 354 AAYDPEGL-----AFAIGVNSDSIKLYDVRSYDKGPFAS-F-KCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFN 426 (515)
Q Consensus 354 ~~~s~~~~-----~l~~g~~dg~i~i~d~~~~~~~~~~~-~-~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~ 426 (515)
++|+|+++ ++++-+..+.|..||+.......... + ............+++.++|+..++....+.|.+||...
T Consensus 177 i~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~ 256 (314)
T d1pjxa_ 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred eEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCC
Confidence 88988764 44455677889999887532111111 1 11222233456899999999888877889999999888
Q ss_pred CceeEEeeccccCCCCCEEEEEecCCCEE-EEEeCCCcEEEEECC
Q psy6127 427 GNCVQSLSGVLNNNASPLEATFTPDSQFV-ASGSTDGQVHIWNAE 470 (515)
Q Consensus 427 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~l-~sgs~dg~I~iwd~~ 470 (515)
++....+.... ..+++++|.|+++.| ++.+.+|.|...++.
T Consensus 257 g~~~~~i~~p~---~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 257 GQPKMRIRCPF---EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp BSCSEEEECSS---SCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CEEEEEEECCC---CCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 87666665432 237899999999755 555667888887764
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=2.9e-09 Score=96.76 Aligned_cols=237 Identities=10% Similarity=0.059 Sum_probs=150.2
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 222 DKINSLDYSSDGSLLISC-SDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasg-s~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
-.-..++++++|+..++. +..+.+..++...................+++.+++.. +++. ...+.+++++-.++..+
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i-~v~d-~~~~~i~~~~~~~~~~~ 91 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTV-YVTD-FNNRVVTLAAGSNNQTV 91 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCE-EEEE-TTTEEEEECTTCSCCEE
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCE-EEee-eeeceeeeeeeccceee
Confidence 345899999999966654 45577777765533222222222244678899998863 3333 34556666655554444
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEE-ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeec
Q psy6127 301 RYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMI-QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRS 379 (515)
Q Consensus 301 ~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~ 379 (515)
.... ......++++.++++.+++-..+..+..++.......... ........++++++++.+++...++.|..+|...
T Consensus 92 ~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~ 170 (260)
T d1rwia_ 92 LPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 170 (260)
T ss_dssp CCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eeee-eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeecccccccccccccc
Confidence 3333 2356789999999998777666677777776554432221 2223467899999999888888888899988765
Q ss_pred CCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEe
Q psy6127 380 YDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGS 459 (515)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs 459 (515)
.. ..............++++++|+++++....+.|..++...... ..+.. .....+..++++++|.++++-.
T Consensus 171 ~~-----~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~--~~~~~P~~i~~d~~g~l~vad~ 242 (260)
T d1rwia_ 171 NN-----QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPF--TGLNTPLAVAVDSDRTVYVADR 242 (260)
T ss_dssp CC-----EEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCC--CSCCCEEEEEECTTCCEEEEEG
T ss_pred ce-----eeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEcc--CCCCCeEEEEEeCCCCEEEEEC
Confidence 32 2222223334567999999998877777788888887654432 22211 1123368999999998877766
Q ss_pred CCCcEEEEEC
Q psy6127 460 TDGQVHIWNA 469 (515)
Q Consensus 460 ~dg~I~iwd~ 469 (515)
.+++|+.++.
T Consensus 243 ~~~rI~~i~~ 252 (260)
T d1rwia_ 243 GNDRVVKLTS 252 (260)
T ss_dssp GGTEEEEECC
T ss_pred CCCEEEEEeC
Confidence 6776765553
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.17 E-value=3.5e-09 Score=99.03 Aligned_cols=243 Identities=11% Similarity=0.082 Sum_probs=151.4
Q ss_pred CceeEEEEecCCCeEEEEEe-----eCCCeEEEEECCCCeeeEEecCC----CCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy6127 264 YGVDLIKFTHSKTTAIHAST-----KVDATLRYLSLHDNKYVRYFPGH----VRKVSSLNLSPVDDSFISGSYDKTVRVW 334 (515)
Q Consensus 264 ~~v~~~~~~~~~~~l~~~s~-----~~d~~v~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s~s~dg~i~iw 334 (515)
.....++|.++|+..++... ..+++|..||..++......... .+....++|.++++.++++...+.+...
T Consensus 18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~ 97 (314)
T d1pjxa_ 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence 34567889999975543211 11467999999887654433222 2346789999999988888877788888
Q ss_pred EcCCCCeEEEEec-CC----CeeEEEECCCCCEEEEEECC-------------CcEEEEEeecCCCCCceeeecCCCCCc
Q psy6127 335 DLRQPNNVGMIQL-SG----NKPIAAYDPEGLAFAIGVNS-------------DSIKLYDVRSYDKGPFASFKCPGERGC 396 (515)
Q Consensus 335 d~~~~~~~~~~~~-~~----~~~~~~~s~~~~~l~~g~~d-------------g~i~i~d~~~~~~~~~~~~~~~~~~~~ 396 (515)
|...+........ .+ ..+.++++++|++.++-... ..-++|-+..... ..... ....
T Consensus 98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~--~~~~~---~~~~ 172 (314)
T d1pjxa_ 98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ--MIQVD---TAFQ 172 (314)
T ss_dssp ETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC--EEEEE---EEES
T ss_pred eCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCc--eeEee---CCcc
Confidence 8765533221111 11 25679999999888764321 1123443332110 11111 1111
Q ss_pred CeEEEEEcCCCC----EEEE-EECCCcEEEEECCCCceeEE---eeccc-cCCCCCEEEEEecCCCEEEEEeCCCcEEEE
Q psy6127 397 EWTGLKFSPDGK----LILV-STNGSIIRLFDAFNGNCVQS---LSGVL-NNNASPLEATFTPDSQFVASGSTDGQVHIW 467 (515)
Q Consensus 397 ~i~~l~~sp~~~----~l~~-~s~dg~i~iwd~~~~~~~~~---~~~~~-~~~~~i~~~~~sp~g~~l~sgs~dg~I~iw 467 (515)
..+.++|+|+++ +|++ -+..+.|..||+.....+.. +.... ......-.+++.++|++.++....+.|.+|
T Consensus 173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~ 252 (314)
T d1pjxa_ 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEE
Confidence 235789998764 4544 45678898888754333221 11111 111224679999999988887788999999
Q ss_pred ECCCCeEEEEEcCCCCCCeEEEEECCCCCE-EEEeeCCEEEEcCCC
Q psy6127 468 NAERGYKVCVLDGDHPSAVQSLQFNPKYHM-LASACSNMAFWIPTL 512 (515)
Q Consensus 468 d~~~~~~~~~~~~~h~~~V~~l~~sp~~~~-las~~~dv~iW~~~~ 512 (515)
|.+.++.+..+.. .....++++|.||++. .++.+.+.+||.++.
T Consensus 253 dp~~g~~~~~i~~-p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~ 297 (314)
T d1pjxa_ 253 GPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred eCCCCEEEEEEEC-CCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence 9988877766665 4567899999999974 455556677777654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.13 E-value=3.9e-08 Score=91.20 Aligned_cols=241 Identities=11% Similarity=0.079 Sum_probs=154.7
Q ss_pred eEeeeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 211 YRVAKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 211 ~~~~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
.+.+..+... ..+..++++|||+++++...+++|..|+.. ++ ...+......+.+++|.++++.+++.. .++.+.
T Consensus 18 ~~v~~~~p~~-~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~dG~l~v~~~--~~~~~~ 92 (302)
T d2p4oa1 18 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTSNGDLVATGW--NADSIP 92 (302)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECTTSCEEEEEE--CTTSCE
T ss_pred ccEEEECCCC-CCcCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcCCCCeEEEec--CCceEE
Confidence 3444555432 258899999999999999999999888865 33 333444557899999999998544433 467777
Q ss_pred EEECCCC--eeeEE-ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC-----------CCeeEEEE
Q psy6127 291 YLSLHDN--KYVRY-FPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS-----------GNKPIAAY 356 (515)
Q Consensus 291 vwd~~~~--~~~~~-~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~ 356 (515)
.|+.... ..... ..........+++.++++++++.+.++.+..+|...+......... .....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~ 172 (302)
T d2p4oa1 93 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKR 172 (302)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE
T ss_pred EEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccc
Confidence 7775432 22111 1234566899999999999888888999999998877544333211 11234445
Q ss_pred CCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeecc
Q psy6127 357 DPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGV 436 (515)
Q Consensus 357 s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~ 436 (515)
+. +..+++.+..+.|..++............... ......++++++|++.++...++.|..++.. ++........
T Consensus 173 ~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~ 247 (302)
T d2p4oa1 173 FG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE 247 (302)
T ss_dssp ET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred cC-CceeeecCCCCeEEeccccccccccccccccC---CCCCcceEECCCCCEEEEEcCCCcEEEECCC-CCEEEEEecC
Confidence 43 33445556778888888765432111111111 1123479999999988877788999999764 4433333222
Q ss_pred ccCCCCCEEEEE---ecCCCEEEEEeCCC
Q psy6127 437 LNNNASPLEATF---TPDSQFVASGSTDG 462 (515)
Q Consensus 437 ~~~~~~i~~~~~---sp~g~~l~sgs~dg 462 (515)
.....+++++| ++|++.|+.++..|
T Consensus 248 -~~~~~pt~vafg~~~~D~~~Lyvtt~~g 275 (302)
T d2p4oa1 248 -QGVIGSTAVAFGQTEGDCTAIYVVTNGG 275 (302)
T ss_dssp -GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -CCCCCceEEEEcCCCCCCCEEEEECCCC
Confidence 23334789999 67888888766543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.11 E-value=1.9e-07 Score=87.18 Aligned_cols=239 Identities=9% Similarity=0.011 Sum_probs=156.4
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeC--CCeEEEEECCCCe
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKV--DATLRYLSLHDNK 298 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~--d~~v~vwd~~~~~ 298 (515)
...+..++|.++|++.++-...+.|..|+.++++....+.........+++.++|..+++..++. .+.+...+...+.
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~ 118 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 118 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce
Confidence 34456899999999777777889999999887766666655666788999999997655443222 3345555655554
Q ss_pred eeEEecC--CCCCeEEEEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE-ECC
Q psy6127 299 YVRYFPG--HVRKVSSLNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG-VNS 369 (515)
Q Consensus 299 ~~~~~~~--h~~~v~~l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~d 369 (515)
....... -......+++.++|++.++... .+.+..++...+........-...+.++|+|+++.|..+ +..
T Consensus 119 ~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~ 198 (319)
T d2dg1a1 119 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTA 198 (319)
T ss_dssp CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred eeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccC
Confidence 4333322 2345788999999986665432 123555555444433333333346779999999876554 567
Q ss_pred CcEEEEEeecCCCCCce---eeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc---cCCCCC
Q psy6127 370 DSIKLYDVRSYDKGPFA---SFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL---NNNASP 443 (515)
Q Consensus 370 g~i~i~d~~~~~~~~~~---~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~i 443 (515)
+.|..|++......... ..............++++++|++.++....+.|.+||. +|+.+..+.... .+...+
T Consensus 199 ~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~ 277 (319)
T d2dg1a1 199 NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS 277 (319)
T ss_dssp TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC
T ss_pred CceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCcee
Confidence 89999998653211110 11111111223458999999998888888999999994 788887776432 222347
Q ss_pred EEEEEecCCCEEEEEeC
Q psy6127 444 LEATFTPDSQFVASGST 460 (515)
Q Consensus 444 ~~~~~sp~g~~l~sgs~ 460 (515)
++++|.|++..+++...
T Consensus 278 ~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 278 THPQFIPGTNQLIICSN 294 (319)
T ss_dssp CEEEECTTSCEEEEEEE
T ss_pred eeEEEeCCCCEEEEEcC
Confidence 89999998877766543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.11 E-value=2.5e-08 Score=92.58 Aligned_cols=240 Identities=9% Similarity=-0.009 Sum_probs=151.3
Q ss_pred eeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy6127 254 TSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRV 333 (515)
Q Consensus 254 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~i 333 (515)
+.+..+... ..+..+++.|+|+.++ +...+++|..|+.... ...+......+.+++|.|+|+++++...++.+..
T Consensus 19 ~v~~~~p~~-~~~e~iAv~pdG~l~v--t~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~ 93 (302)
T d2p4oa1 19 KIITSFPVN-TFLENLASAPDGTIFV--TNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPV 93 (302)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEE--EETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred cEEEECCCC-CCcCCEEECCCCCEEE--EeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEE
Confidence 344445433 2578899999997443 3346899998886543 2334446678999999999999998888888888
Q ss_pred EEcCCCC--eEEEE--ecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCce-----eeecCCCCCcCeEEEEEc
Q psy6127 334 WDLRQPN--NVGMI--QLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFA-----SFKCPGERGCEWTGLKFS 404 (515)
Q Consensus 334 wd~~~~~--~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~-----~~~~~~~~~~~i~~l~~s 404 (515)
|+..... ..... ........+++.++++++++.+.++.+..+|.......... ..............+.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~ 173 (302)
T d2p4oa1 94 VSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF 173 (302)
T ss_dssp EEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred EEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCccccccccccc
Confidence 8765433 22222 22344678999999999888877888877776653211000 000111222344566665
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC-CCC
Q psy6127 405 PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG-DHP 483 (515)
Q Consensus 405 p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~h~ 483 (515)
.+ ..+++.+..+.|..++.............. ....+..++++++|+++++...++.|..++.. ++....... ..-
T Consensus 174 ~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~ 250 (302)
T d2p4oa1 174 GN-FLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV 250 (302)
T ss_dssp TT-EEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTC
T ss_pred CC-ceeeecCCCCeEEecccccccccccccccc-CCCCCcceEECCCCCEEEEEcCCCcEEEECCC-CCEEEEEecCCCC
Confidence 43 344455677888888876543322221111 11225679999999988888889999999875 443333321 134
Q ss_pred CCeEEEEE---CCCCCEEEEe
Q psy6127 484 SAVQSLQF---NPKYHMLASA 501 (515)
Q Consensus 484 ~~V~~l~~---sp~~~~las~ 501 (515)
...++++| ++|++.|..+
T Consensus 251 ~~pt~vafg~~~~D~~~Lyvt 271 (302)
T d2p4oa1 251 IGSTAVAFGQTEGDCTAIYVV 271 (302)
T ss_dssp TTEEEEEECCSTTTTTEEEEE
T ss_pred CCceEEEEcCCCCCCCEEEEE
Confidence 56899999 6788766543
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=1.2e-07 Score=93.43 Aligned_cols=278 Identities=12% Similarity=0.073 Sum_probs=158.4
Q ss_pred cEEEEccceeeeeEe--eeeccccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCC-CCc----------
Q psy6127 199 TITKCSENLVRSYRV--AKVFRENTDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSK-KYG---------- 265 (515)
Q Consensus 199 ~~i~~wd~~~~~~~~--~~~~~~h~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~-~~~---------- 265 (515)
+.+.++| +..++. +.........+....|||||+.+|-.. ++.+.+.+..++..++..... ...
T Consensus 91 ~~~~i~d--~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vy 167 (465)
T d1xfda1 91 GYYVLSK--IPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY 167 (465)
T ss_dssp SEEEEEE--SSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred ccEEEEE--ccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhh
Confidence 4455555 433332 222333455566788999999999876 578888888776655444321 111
Q ss_pred -------eeEEEEecCCCeEEEEEeeCCC---------------------------------eEEEEECCCCeeeEEe--
Q psy6127 266 -------VDLIKFTHSKTTAIHASTKVDA---------------------------------TLRYLSLHDNKYVRYF-- 303 (515)
Q Consensus 266 -------v~~~~~~~~~~~l~~~s~~~d~---------------------------------~v~vwd~~~~~~~~~~-- 303 (515)
-.++.|+|||+.+++.... +. .+.++|+.++......
T Consensus 168 eee~~~~~~a~~WSPDgk~iaf~~~D-~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~ 246 (465)
T d1xfda1 168 EEEILKTHIAHWWSPDGTRLAYAAIN-DSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP 246 (465)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEE-CTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC
T ss_pred hhhhccccceEEECCCCCeEEEEEec-ccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEec
Confidence 2477899999999987632 22 2445555444322111
Q ss_pred ----cCCCCCeEEEEEcCCCCEEEEEeC-C---CcEEEEEcCCCCeEEEEecCCC------eeEEEECCCCCEEEE--EE
Q psy6127 304 ----PGHVRKVSSLNLSPVDDSFISGSY-D---KTVRVWDLRQPNNVGMIQLSGN------KPIAAYDPEGLAFAI--GV 367 (515)
Q Consensus 304 ----~~h~~~v~~l~~~~~~~~l~s~s~-d---g~i~iwd~~~~~~~~~~~~~~~------~~~~~~s~~~~~l~~--g~ 367 (515)
......+..+.|+|+++.++.... + ..+.++|..++++......... .....|+|+|+.++. .+
T Consensus 247 ~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~s 326 (465)
T d1xfda1 247 PDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI 326 (465)
T ss_dssp CCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE
T ss_pred cCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEee
Confidence 112234678899999886555432 2 2588899999987766532211 234689999985433 22
Q ss_pred -CCC--cEEEEEeecCCCCC-ceeeecCCCCCcCeEEE-EEcCCCCEEEEEE-CCC--cEEEE--ECCCCceeEEeeccc
Q psy6127 368 -NSD--SIKLYDVRSYDKGP-FASFKCPGERGCEWTGL-KFSPDGKLILVST-NGS--IIRLF--DAFNGNCVQSLSGVL 437 (515)
Q Consensus 368 -~dg--~i~i~d~~~~~~~~-~~~~~~~~~~~~~i~~l-~~sp~~~~l~~~s-~dg--~i~iw--d~~~~~~~~~~~~~~ 437 (515)
.+| .+..+++....... -............|..+ .|+++++.++..+ .++ .-.+| ++..+.....+....
T Consensus 327 e~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~ 406 (465)
T d1xfda1 327 PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDL 406 (465)
T ss_dssp CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTS
T ss_pred eecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeecccc
Confidence 333 44444443221100 01111122334455554 6899888776443 322 22344 444333322222222
Q ss_pred cCCCCCEEEEEecCCCEEEEEeCC---CcEEEEECCCCeEEEEEcC
Q psy6127 438 NNNASPLEATFTPDSQFVASGSTD---GQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~d---g~I~iwd~~~~~~~~~~~~ 480 (515)
........+.|||++++++..... -.+.+++..+++.+..++.
T Consensus 407 ~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le~ 452 (465)
T d1xfda1 407 VENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLET 452 (465)
T ss_dssp SSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEEcC
Confidence 223346799999999998854332 4688999999999888863
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=5e-08 Score=96.13 Aligned_cols=284 Identities=10% Similarity=0.079 Sum_probs=158.2
Q ss_pred CcEEEEEEcCCCCEEEEEe---------CCCeEEEEECCCCeeeeEe--cCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 222 DKINSLDYSSDGSLLISCS---------DDDQIIIYDCEQGTSKNTI--NSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs---------~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
-.+....||||+++++... ..+.+.++|+.+++..... ......+....|+|+|+.++++. ++.+.
T Consensus 61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~---~~nl~ 137 (465)
T d1xfda1 61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF---ENNIY 137 (465)
T ss_dssp TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE---TTEEE
T ss_pred cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe---cceEE
Confidence 4677888999999988764 3478899999987654332 23344566789999999999886 88999
Q ss_pred EEECCCCeeeEEec-CCCCC-----------------eEEEEEcCCCCEEEEEeCC-Cc---------------------
Q psy6127 291 YLSLHDNKYVRYFP-GHVRK-----------------VSSLNLSPVDDSFISGSYD-KT--------------------- 330 (515)
Q Consensus 291 vwd~~~~~~~~~~~-~h~~~-----------------v~~l~~~~~~~~l~s~s~d-g~--------------------- 330 (515)
+.+..++..++... +..+. -..+.|+|||+.||....| ..
T Consensus 138 ~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~ 217 (465)
T d1xfda1 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (465)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred EEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeee
Confidence 99988776654432 22121 2577899999998876532 22
Q ss_pred ------------EEEEEcCCCCeEEEEecC-------CCeeEEEECCCCCEEEEEEC-C---CcEEEEEeecCCCCCcee
Q psy6127 331 ------------VRVWDLRQPNNVGMIQLS-------GNKPIAAYDPEGLAFAIGVN-S---DSIKLYDVRSYDKGPFAS 387 (515)
Q Consensus 331 ------------i~iwd~~~~~~~~~~~~~-------~~~~~~~~s~~~~~l~~g~~-d---g~i~i~d~~~~~~~~~~~ 387 (515)
+.++|+.++......... .-+..+.|+|+++.++.... + ..+.++|..++.......
T Consensus 218 Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~ 297 (465)
T d1xfda1 218 YPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE 297 (465)
T ss_dssp CCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred ccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEE
Confidence 334444433222111000 01345789999886665443 2 246777777654221111
Q ss_pred eecCCCCCcCeEEEEEcCCCCEEEE--EE-CCC--cEEEEECC------CCceeEEeeccccCCCCCEEE-EEecCCCEE
Q psy6127 388 FKCPGERGCEWTGLKFSPDGKLILV--ST-NGS--IIRLFDAF------NGNCVQSLSGVLNNNASPLEA-TFTPDSQFV 455 (515)
Q Consensus 388 ~~~~~~~~~~i~~l~~sp~~~~l~~--~s-~dg--~i~iwd~~------~~~~~~~~~~~~~~~~~i~~~-~~sp~g~~l 455 (515)
.....-....-....|+|+|+.++. .+ .+| .++..++. .++....+. .....|..+ +|+++++.+
T Consensus 298 e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT---~G~w~V~~i~~~d~~~~~v 374 (465)
T d1xfda1 298 DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT---SGDWDVTKILAYDEKGNKI 374 (465)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC---CSSSCEEEEEEEETTTTEE
T ss_pred EcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEec---cCCceEEEEEEEcCCCCEE
Confidence 1111000011124679999985432 22 333 34444322 222222222 123335554 688888766
Q ss_pred E-EEeCCC--cEEEE--ECCCCeEEEEEc--CCCCCCeEEEEECCCCCEEEEeeCC-----EEEEcCC
Q psy6127 456 A-SGSTDG--QVHIW--NAERGYKVCVLD--GDHPSAVQSLQFNPKYHMLASACSN-----MAFWIPT 511 (515)
Q Consensus 456 ~-sgs~dg--~I~iw--d~~~~~~~~~~~--~~h~~~V~~l~~sp~~~~las~~~d-----v~iW~~~ 511 (515)
+ ++..++ .-.+| ++..+.....+. ........++.|||++++++..... ..+++..
T Consensus 375 yF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~ 442 (465)
T d1xfda1 375 YFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTT 442 (465)
T ss_dssp EEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETT
T ss_pred EEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECC
Confidence 4 444332 23344 444332222221 1134457799999999998854321 5665543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.05 E-value=2.4e-07 Score=86.38 Aligned_cols=243 Identities=13% Similarity=0.126 Sum_probs=153.7
Q ss_pred CCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEcCC
Q psy6127 263 KYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY----DKTVRVWDLRQ 338 (515)
Q Consensus 263 ~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~----dg~i~iwd~~~ 338 (515)
......++|.++|+ ++++. ...+.|..|+.++++....+.........+++.++|+++++... .+.+...+...
T Consensus 39 ~~~lEG~~~D~~G~-Ly~~D-~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~ 116 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQ-LFLLD-VFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 116 (319)
T ss_dssp CCCEEEEEECTTSC-EEEEE-TTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CcCcEeCEECCCCC-EEEEE-CCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCC
Confidence 34456889999986 55544 46889999998887766666556677899999999998776543 23455556555
Q ss_pred CCeEEEEec---CCCeeEEEECCCCCEEEEEECC----CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEE
Q psy6127 339 PNNVGMIQL---SGNKPIAAYDPEGLAFAIGVNS----DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLIL 411 (515)
Q Consensus 339 ~~~~~~~~~---~~~~~~~~~s~~~~~l~~g~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~ 411 (515)
......... ......++++++|++.++.... ..-.+|-+..... ....+. ......+.++|+|+++.|+
T Consensus 117 ~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~~---~~~~~pnGia~s~dg~~ly 192 (319)
T d2dg1a1 117 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPII---QNISVANGIALSTDEKVLW 192 (319)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEE---EEESSEEEEEECTTSSEEE
T ss_pred ceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEEEe---eccceeeeeeeccccceEE
Confidence 555444422 2235678999999877664321 1222333322111 111111 1112346899999999776
Q ss_pred EE-ECCCcEEEEECCCC-ceeEEe----eccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC-----
Q psy6127 412 VS-TNGSIIRLFDAFNG-NCVQSL----SGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG----- 480 (515)
Q Consensus 412 ~~-s~dg~i~iwd~~~~-~~~~~~----~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~----- 480 (515)
.+ +..+.|+.|++... ...... ..........-.+++.++|++.++....+.|.+||. +|+.+..+..
T Consensus 193 vad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~ 271 (319)
T d2dg1a1 193 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE 271 (319)
T ss_dssp EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGG
T ss_pred EecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCC
Confidence 55 46788999987632 222111 111111122567999999998888888999999995 6888887753
Q ss_pred CCCCCeEEEEECCCCCEEEEee------CCEEEEcCCC
Q psy6127 481 DHPSAVQSLQFNPKYHMLASAC------SNMAFWIPTL 512 (515)
Q Consensus 481 ~h~~~V~~l~~sp~~~~las~~------~dv~iW~~~~ 512 (515)
.+...+++++|.|++..+.... +...+|.++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~l~~~~~ 309 (319)
T d2dg1a1 272 GHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 309 (319)
T ss_dssp TCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred CcCceeeeEEEeCCCCEEEEEcCCCCcCCceeEEEEeC
Confidence 1344688999999776665543 2266666554
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.02 E-value=4e-07 Score=83.12 Aligned_cols=237 Identities=7% Similarity=0.140 Sum_probs=158.7
Q ss_pred ceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecC------CCCCeEEEEEcCCCC-EEEEE-eCCCcEEEEEc
Q psy6127 265 GVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPG------HVRKVSSLNLSPVDD-SFISG-SYDKTVRVWDL 336 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~-~l~s~-s~dg~i~iwd~ 336 (515)
....+++.++++ ++++- ..++.|++||.+ ++.+..+.. .......+++.++.. .+++. +.++.|..++.
T Consensus 24 ~P~gvavd~dg~-i~VaD-~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 100 (279)
T d1q7fa_ 24 EPSGVAVNAQND-IIVAD-TNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 100 (279)
T ss_dssp CEEEEEECTTCC-EEEEE-GGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred CccEEEEcCCCC-EEEEE-CCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc
Confidence 367899999886 44443 357899999965 666665532 122345666666544 34333 34557777775
Q ss_pred CCCCeEEEEecC--CCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE
Q psy6127 337 RQPNNVGMIQLS--GNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST 414 (515)
Q Consensus 337 ~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s 414 (515)
.++....+... .....+++.++|+.+++....+.+.+++.... ....+. ...+......+++.++++.+++..
T Consensus 101 -~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~---~~~~~g-~~~~~~~~~~i~~d~~g~i~v~d~ 175 (279)
T d1q7fa_ 101 -YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---VLHKFG-CSKHLEFPNGVVVNDKQEIFISDN 175 (279)
T ss_dssp -TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---EEEEEE-CTTTCSSEEEEEECSSSEEEEEEG
T ss_pred -cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCc---eeeccc-ccccccccceeeeccceeEEeeec
Confidence 45656655332 34678999999998888777777888775431 111221 233455677899999998888888
Q ss_pred CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC-CCcEEEEECCCCeEEEEEcC-CCCCCeEEEEEC
Q psy6127 415 NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST-DGQVHIWNAERGYKVCVLDG-DHPSAVQSLQFN 492 (515)
Q Consensus 415 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~-dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s 492 (515)
..+.|++||. +++.+..+.. .+....+..+++.|+|+++++-.. ++.|.+|+ .+|+.+..+.. ......+.+++.
T Consensus 176 ~~~~V~~~d~-~G~~~~~~g~-~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~ 252 (279)
T d1q7fa_ 176 RAHCVKVFNY-EGQYLRQIGG-EGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALM 252 (279)
T ss_dssp GGTEEEEEET-TCCEEEEESC-TTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEE
T ss_pred cccceeeeec-CCceeeeecc-cccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEe
Confidence 8899999995 5676666642 223334789999999997776543 45799998 46887777643 133467899999
Q ss_pred CCCCEEEEeeC-CEEEEcCCC
Q psy6127 493 PKYHMLASACS-NMAFWIPTL 512 (515)
Q Consensus 493 p~~~~las~~~-dv~iW~~~~ 512 (515)
|+|.++++... .+++|.+..
T Consensus 253 ~dG~l~V~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 253 DDGSVVLASKDYRLYIYRYVQ 273 (279)
T ss_dssp TTTEEEEEETTTEEEEEECSC
T ss_pred CCCcEEEEeCCCeEEEEEeee
Confidence 99987765533 289998653
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.75 E-value=1.7e-05 Score=72.45 Aligned_cols=221 Identities=13% Similarity=0.054 Sum_probs=146.1
Q ss_pred eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEe
Q psy6127 267 DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQ 346 (515)
Q Consensus 267 ~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 346 (515)
....|.+....++.+- -..+.|..||..+++... +. ....+.++++.++|.++++ +.+ .+..+|..+++......
T Consensus 21 Egp~wd~~~~~l~wvD-i~~~~I~r~d~~~g~~~~-~~-~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~ 95 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFN-ILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAE 95 (295)
T ss_dssp EEEEEETTTTEEEEEE-GGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEEC
T ss_pred eCCeEECCCCEEEEEE-CCCCEEEEEECCCCeEEE-EE-CCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEee
Confidence 3456887777777664 257899999999886542 22 3456889999998876665 444 58899999988655443
Q ss_pred cCC-----CeeEEEECCCCCEEEEEEC----CCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CC
Q psy6127 347 LSG-----NKPIAAYDPEGLAFAIGVN----SDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NG 416 (515)
Q Consensus 347 ~~~-----~~~~~~~s~~~~~l~~g~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~d 416 (515)
... ..+.+.++|+|++.++... .+.-.+|.+..++. .... ..-...+.++|+|+++.++.+. ..
T Consensus 96 ~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~---~~~~---~~~~~~Ng~~~s~d~~~l~~~dt~~ 169 (295)
T d2ghsa1 96 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV---TKLF---ADISIPNSICFSPDGTTGYFVDTKV 169 (295)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE---EEEE---EEESSEEEEEECTTSCEEEEEETTT
T ss_pred eecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcE---EEEe---eccCCcceeeecCCCceEEEeeccc
Confidence 221 2567899999997776542 23456676655321 1111 1122346899999998766554 57
Q ss_pred CcEEEEECCCCc--e---eEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEE
Q psy6127 417 SIIRLFDAFNGN--C---VQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQF 491 (515)
Q Consensus 417 g~i~iwd~~~~~--~---~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 491 (515)
+.|..|++.... . ...+.........+..+++..+|++.++.-..+.|..||. +|+.+..+.- ....+++++|
T Consensus 170 ~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~l-P~~~~T~~~F 247 (295)
T d2ghsa1 170 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-PGKQTTCPAF 247 (295)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-SCSBEEEEEE
T ss_pred ceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecC-CCCceEEEEE
Confidence 788888864221 1 1112212223334678999999998887777889999995 6888888875 4457999999
Q ss_pred C-CCCCEEEE
Q psy6127 492 N-PKYHMLAS 500 (515)
Q Consensus 492 s-p~~~~las 500 (515)
- ||.+.|..
T Consensus 248 GG~d~~~Lyv 257 (295)
T d2ghsa1 248 IGPDASRLLV 257 (295)
T ss_dssp ESTTSCEEEE
T ss_pred eCCCCCEEEE
Confidence 6 56655443
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.74 E-value=1.7e-05 Score=72.54 Aligned_cols=223 Identities=9% Similarity=0.027 Sum_probs=148.7
Q ss_pred EEEEcCCC-CEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEec
Q psy6127 226 SLDYSSDG-SLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 226 ~l~~spd~-~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~ 304 (515)
+..|++.. .+..+=-..+.|.-||.++++.. .+. ....+.++++.+++.. ++++ ...+..+|..+++......
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l-~va~---~~gl~~~d~~tg~~~~l~~ 95 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQ-LIAS---DDGLFLRDTATGVLTLHAE 95 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEE-EEEE---TTEEEEEETTTCCEEEEEC
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCE-EEEE---eCccEEeecccceeeEEee
Confidence 44588744 44444446689999999887653 332 2356788999888754 4444 4579999999887654332
Q ss_pred C----CCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEE-ECCCcEEEE
Q psy6127 305 G----HVRKVSSLNLSPVDDSFISGSY----DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIG-VNSDSIKLY 375 (515)
Q Consensus 305 ~----h~~~v~~l~~~~~~~~l~s~s~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i~i~ 375 (515)
. ....++.+.+.|+|++.++... .+.-.+|.+..++.......-...+.++|+++++.+... +..+.|..|
T Consensus 96 ~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~ 175 (295)
T d2ghsa1 96 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRV 175 (295)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred eecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEe
Confidence 1 1235889999999996665432 234567777777665555444456789999999876555 457888888
Q ss_pred EeecCCCCC---ceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEe-cC
Q psy6127 376 DVRSYDKGP---FASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFT-PD 451 (515)
Q Consensus 376 d~~~~~~~~---~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s-p~ 451 (515)
++....... ...+...........++++.++|++.++.-..+.|..|| .+|+.+..+..... .+++++|- ||
T Consensus 176 ~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~~~i~lP~~---~~T~~~FGG~d 251 (295)
T d2ghsa1 176 PLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHIARYEVPGK---QTTCPAFIGPD 251 (295)
T ss_dssp EBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEEEEEECSCS---BEEEEEEESTT
T ss_pred eecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEeeEecCCCC---ceEEEEEeCCC
Confidence 875432111 111222223344567899999999887777888999999 47888888775433 38999996 67
Q ss_pred CCEEEEE
Q psy6127 452 SQFVASG 458 (515)
Q Consensus 452 g~~l~sg 458 (515)
.+.|+..
T Consensus 252 ~~~LyvT 258 (295)
T d2ghsa1 252 ASRLLVT 258 (295)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 6666544
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.64 E-value=4.7e-06 Score=75.19 Aligned_cols=233 Identities=12% Similarity=0.036 Sum_probs=130.8
Q ss_pred EEcCC--CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCC----CeEEEEECCCCeeeE
Q psy6127 228 DYSSD--GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVD----ATLRYLSLHDNKYVR 301 (515)
Q Consensus 228 ~~spd--~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d----~~v~vwd~~~~~~~~ 301 (515)
..||| |+.+|-.+ +|.|.+.|+.+++. ..+..+...+...+|+|||+.+++...... ..|.+++..+++...
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~ 82 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR 82 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence 35788 99988775 46788889987765 456667778899999999999988763211 248888888887654
Q ss_pred Eec------CCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECC
Q psy6127 302 YFP------GHVRKVSSLNLSPVDDSFISGSYD------KTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNS 369 (515)
Q Consensus 302 ~~~------~h~~~v~~l~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 369 (515)
... ..........|+|+|+.++..... ..+...+...+.... ..........+.+.+..++.....
T Consensus 83 lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 160 (281)
T d1k32a2 83 ITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP--LNLGPATHILFADGRRVIGRNTFE 160 (281)
T ss_dssp CCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEE--CCSCSCSEEEEETTEEEEEESCSC
T ss_pred eeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEE--ecCCccceeeecCCCeEEEeeccc
Confidence 322 122345778999999988875432 224455554443322 122222223333333333322211
Q ss_pred C-----------cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCceeEEeecc
Q psy6127 370 D-----------SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN--GSIIRLFDAFNGNCVQSLSGV 436 (515)
Q Consensus 370 g-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~--dg~i~iwd~~~~~~~~~~~~~ 436 (515)
. .......... ................++++. .+..... ...|.++|+.+++.. .+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~-~lt~~ 232 (281)
T d1k32a2 161 LPHWKGYRGGTRGKIWIEVNSG------AFKKIVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLR-KHTSF 232 (281)
T ss_dssp CTTSTTCCSTTCCEEEEEEETT------EEEEEECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCE-ECCCC
T ss_pred cceeeeeccCCcceeeeecccc------ceeeccCCccccceeeeeccc-cceecccccccceEEEeCCCCceE-EeecC
Confidence 1 1111111111 011101112223345555553 2222222 335778888766543 33222
Q ss_pred ccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy6127 437 LNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCV 477 (515)
Q Consensus 437 ~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~ 477 (515)
.. .....|+|||+.|+.. .++.|+++|+.+++....
T Consensus 233 ~~----~~~~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~~i 268 (281)
T d1k32a2 233 TD----YYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEKI 268 (281)
T ss_dssp CS----SCEEEEEESSSCEEEE-ETTEEEEECTTTCCEEEC
T ss_pred CC----cccccCcCCCCEEEEE-eCCEEEEEECCCCCEEEe
Confidence 11 2345699999988764 478899999998876543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.54 E-value=1.5e-05 Score=71.64 Aligned_cols=224 Identities=8% Similarity=-0.008 Sum_probs=123.4
Q ss_pred EEecC--CCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeC-C-----CcEEEEEcCCCCe
Q psy6127 270 KFTHS--KTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSY-D-----KTVRVWDLRQPNN 341 (515)
Q Consensus 270 ~~~~~--~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-d-----g~i~iwd~~~~~~ 341 (515)
..+|+ |+.+++.+ ++.|.+.|+.+++.. .+..+.+.+...+|+|||+.|+.... + ..|.+++..+++.
T Consensus 5 ~~sPdi~G~~v~f~~---~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~ 80 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC---CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI 80 (281)
T ss_dssp CEEEEEETTEEEEEE---TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE
T ss_pred ccCCCCCCCEEEEEe---CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCce
Confidence 35788 99988875 778999999988765 45567778899999999998886542 2 2377778877766
Q ss_pred EEEEecC-------CCeeEEEECCCCCEEEEEECCC------cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCC
Q psy6127 342 VGMIQLS-------GNKPIAAYDPEGLAFAIGVNSD------SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGK 408 (515)
Q Consensus 342 ~~~~~~~-------~~~~~~~~s~~~~~l~~g~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~ 408 (515)
....... .......|+|+|+.++...... .+...+..... ..... ........+.+.+.
T Consensus 81 ~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~ 152 (281)
T d1k32a2 81 KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGIN-----FVPLN---LGPATHILFADGRR 152 (281)
T ss_dssp EECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTE-----EEECC---SCSCSEEEEETTEE
T ss_pred EEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCce-----eEEec---CCccceeeecCCCe
Confidence 5432211 1245688999999998764321 23344443321 11111 11122333333333
Q ss_pred EEEEEECCC-----------cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC--CcEEEEECCCCeEE
Q psy6127 409 LILVSTNGS-----------IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD--GQVHIWNAERGYKV 475 (515)
Q Consensus 409 ~l~~~s~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d--g~I~iwd~~~~~~~ 475 (515)
.++....+. ................. .........++++. .+.....+ ..|+++|+.+++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~ 227 (281)
T d1k32a2 153 VIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD----MSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLR 227 (281)
T ss_dssp EEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC----CSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCE
T ss_pred EEEeeccccceeeeeccCCcceeeeeccccceeeccC----Cccccceeeeeccc-cceecccccccceEEEeCCCCceE
Confidence 443332211 11122222222222111 12224555666553 23333333 35788888776654
Q ss_pred EEEcCCCCCCeEEEEECCCCCEEEEee-CCEEEEcCCCC
Q psy6127 476 CVLDGDHPSAVQSLQFNPKYHMLASAC-SNMAFWIPTLS 513 (515)
Q Consensus 476 ~~~~~~h~~~V~~l~~sp~~~~las~~-~dv~iW~~~~~ 513 (515)
. +....... ...|+|||+.|+... +++.+++++.+
T Consensus 228 ~-lt~~~~~~--~~~~SpDG~~I~f~~~~~l~~~d~~~g 263 (281)
T d1k32a2 228 K-HTSFTDYY--PRHLNTDGRRILFSKGGSIYIFNPDTE 263 (281)
T ss_dssp E-CCCCCSSC--EEEEEESSSCEEEEETTEEEEECTTTC
T ss_pred E-eecCCCcc--cccCcCCCCEEEEEeCCEEEEEECCCC
Confidence 3 33212223 346899998877644 55777776543
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.49 E-value=0.00035 Score=62.20 Aligned_cols=249 Identities=10% Similarity=0.023 Sum_probs=155.9
Q ss_pred CEEEEEeCCCeEEEEECCCCee-----eeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCC
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTS-----KNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVR 308 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~ 308 (515)
.+|+-+.. +.|+-.+++.... ...+..+...+..++|.+..+.++.+. ..++.|+..++..+...........
T Consensus 2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd-~~~~~I~~~~l~g~~~~~v~~~~~~ 79 (263)
T d1npea_ 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTD-ISEPSIGRASLHGGEPTTIIRQDLG 79 (263)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEE-TTTTEEEEEESSSCCCEEEECTTCC
T ss_pred CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEE-CCCCeEEEEEcccCCcEEEEEeccc
Confidence 34444433 4666666653321 122333445578899999998888765 4678899999887665555544446
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEECC-CcEEEEEeecCCCCCc
Q psy6127 309 KVSSLNLSPVDDSFISG-SYDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGVNS-DSIKLYDVRSYDKGPF 385 (515)
Q Consensus 309 ~v~~l~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~d-g~i~i~d~~~~~~~~~ 385 (515)
.+..+++..-+..|+.+ ...+.|.+.++............ ..+..++++|...++...... +..+|+..........
T Consensus 80 ~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~ 159 (263)
T d1npea_ 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (263)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred cccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce
Confidence 78999998767766655 45678999999876654444332 457889999988777765432 3444554433222111
Q ss_pred eeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE-eCCCc
Q psy6127 386 ASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG-STDGQ 463 (515)
Q Consensus 386 ~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg-s~dg~ 463 (515)
.+. ...-....++++++.++.|+.+. ..+.|...++........+.+. .+ +..+++. +..|+.. ...+.
T Consensus 160 -~i~--~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~-~~---P~~lav~--~~~lYwtd~~~~~ 230 (263)
T d1npea_ 160 -ILA--QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QY---PFAVTSY--GKNLYYTDWKTNS 230 (263)
T ss_dssp -EEE--CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CS---EEEEEEE--TTEEEEEETTTTE
T ss_pred -eee--eecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCC-CC---cEEEEEE--CCEEEEEECCCCE
Confidence 111 12234557999999888887664 5678999998655443333322 12 5677776 4455544 46688
Q ss_pred EEEEECCCCeEEEEEcCCCCCCeEEEEECC
Q psy6127 464 VHIWNAERGYKVCVLDGDHPSAVQSLQFNP 493 (515)
Q Consensus 464 I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp 493 (515)
|...|..+++.+..+.........+++..+
T Consensus 231 I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~ 260 (263)
T d1npea_ 231 VIAMDLAISKEMDTFHPHKQTRLYGITIAL 260 (263)
T ss_dssp EEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred EEEEECCCCccceEECCCCCCCcceEEEeC
Confidence 999999999988777542334444555544
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.48 E-value=6.5e-05 Score=70.05 Aligned_cols=260 Identities=15% Similarity=0.087 Sum_probs=163.2
Q ss_pred EEEEeCCCeEEEEECCCCeeeeEecCCC---------------------------------------Cce--eEEEEec-
Q psy6127 236 LISCSDDDQIIIYDCEQGTSKNTINSKK---------------------------------------YGV--DLIKFTH- 273 (515)
Q Consensus 236 lasgs~dg~i~iwd~~~~~~~~~~~~~~---------------------------------------~~v--~~~~~~~- 273 (515)
+.||+..|.|+++-+.+++.++.+.... +.. ..+.+..
T Consensus 16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG 95 (459)
T d1fwxa2 16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 95 (459)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence 5677788888888888877766542100 011 1344443
Q ss_pred --CCCeEEEEEeeCCCeEEEEECCCCeeeEEec-CCCCCeEEEEEcCCC--CEEEEEeCCC------------------c
Q psy6127 274 --SKTTAIHASTKVDATLRYLSLHDNKYVRYFP-GHVRKVSSLNLSPVD--DSFISGSYDK------------------T 330 (515)
Q Consensus 274 --~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~--~~l~s~s~dg------------------~ 330 (515)
||+++++.. ..+.+|.+.|+++.+..+... .....+..+...+++ .+++.++.+. .
T Consensus 96 tyDGrylFVND-kan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~ 174 (459)
T d1fwxa2 96 KYDGRFLFMND-KANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 174 (459)
T ss_dssp EEEEEEEEEEE-TTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEE
T ss_pred ccceeEEEEEc-CCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceE
Confidence 677777665 578999999999998866443 234556777776544 4777766532 3
Q ss_pred EEEEEcCCCCeEEEEecCCCeeEEEECCCCCEEEEEECCC---------------cEEEEE-------------------
Q psy6127 331 VRVWDLRQPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSD---------------SIKLYD------------------- 376 (515)
Q Consensus 331 i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---------------~i~i~d------------------- 376 (515)
+.++|..+.+.............+.++++|+++++.+.+. .+.+++
T Consensus 175 ~t~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV 254 (459)
T d1fwxa2 175 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 254 (459)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCc
Confidence 6788999999888887777788899999999998877431 233333
Q ss_pred ----eecCCCC-CceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCc--------eeEEeeccccCCCC
Q psy6127 377 ----VRSYDKG-PFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGN--------CVQSLSGVLNNNAS 442 (515)
Q Consensus 377 ----~~~~~~~-~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~--------~~~~~~~~~~~~~~ 442 (515)
.+..... ....+.... ....+.++|||+++++++ .+.++.++|++.-. ....+.+.....-.
T Consensus 255 ~VVD~~~~~~~~v~~yIPVpK----sPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglg 330 (459)
T d1fwxa2 255 KVVDGRKEASSLFTRYIPIAN----NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG 330 (459)
T ss_dssp EEEECSGG--CSSEEEEEEES----SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSC
T ss_pred eeecccccCCcceeEEEecCC----CCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcC
Confidence 3321111 111111111 122689999999998877 58899999986321 11111111112223
Q ss_pred CEEEEEecCCCEEEEEeCCCcEEEEECCCC----------eEEEEEcCCCCCCeEEE------EECCCCCEEEEee
Q psy6127 443 PLEATFTPDSQFVASGSTDGQVHIWNAERG----------YKVCVLDGDHPSAVQSL------QFNPKYHMLASAC 502 (515)
Q Consensus 443 i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~----------~~~~~~~~~h~~~V~~l------~~sp~~~~las~~ 502 (515)
...-+|+..|.-..+---|..|.-|++... ..+..+.. |-. +-.+ ...|+|++|++..
T Consensus 331 PLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v-~y~-~gh~~~~~g~t~~~dgk~l~~~n 404 (459)
T d1fwxa2 331 PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQ-PGHLKTVMGETLDATNDWLVCLS 404 (459)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSC-EEEEEETTTTSTTCCSSEEEEEE
T ss_pred ccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceecccc-ccC-CCCCccCcCCcCCCCCCEEEEec
Confidence 567789988865556668999999998432 44555543 321 2222 2467899998875
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.15 E-value=0.00058 Score=63.55 Aligned_cols=229 Identities=13% Similarity=0.133 Sum_probs=143.7
Q ss_pred EEEEcC---CCCEEEEEe-CCCeEEEEECCCCeeeeEecCC-CCceeEEEEecCCCeEEEEEeeCC--------------
Q psy6127 226 SLDYSS---DGSLLISCS-DDDQIIIYDCEQGTSKNTINSK-KYGVDLIKFTHSKTTAIHASTKVD-------------- 286 (515)
Q Consensus 226 ~l~~sp---d~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~~~d-------------- 286 (515)
.+++.. ||++|+... .+++|-+-|+++.++.+.+... ...+..+...++++..++...+.+
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~ 168 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 168 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccch
Confidence 445543 899988776 5789999999999887655432 345666777665554444432221
Q ss_pred ----CeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC----------------------------------
Q psy6127 287 ----ATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD---------------------------------- 328 (515)
Q Consensus 287 ----~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d---------------------------------- 328 (515)
+.+.++|.++.+......- .+....++++++|+++++.+.+
T Consensus 169 ~~y~~~~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk 247 (459)
T d1fwxa2 169 ANYVNVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 247 (459)
T ss_dssp G-EEEEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred hhcceEEEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCC
Confidence 3467889988887665542 2346678999999998887743
Q ss_pred ----CcEEEEEcCC---CCeEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCC------CCCceeeecCCCC
Q psy6127 329 ----KTVRVWDLRQ---PNNVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYD------KGPFASFKCPGER 394 (515)
Q Consensus 329 ----g~i~iwd~~~---~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~------~~~~~~~~~~~~~ 394 (515)
+.+.+-|.+. ......+........+.++|||+++++++ -+.++.++|++... ..+..........
T Consensus 248 ~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~el 327 (459)
T d1fwxa2 248 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 327 (459)
T ss_dssp SEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBC
T ss_pred cEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeeccc
Confidence 2234445442 12344455555677799999999988766 58899999997421 1111122222222
Q ss_pred CcCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----------ceeEEeeccccCCCCCEEE------EEecCCCEEEEE
Q psy6127 395 GCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNG----------NCVQSLSGVLNNNASPLEA------TFTPDSQFVASG 458 (515)
Q Consensus 395 ~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~----------~~~~~~~~~~~~~~~i~~~------~~sp~g~~l~sg 458 (515)
.-....-+|+..|.-..+---|..|.-|++... ..+..+..|.+ +-.+ ...|+|++|++.
T Consensus 328 glgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~----~gh~~~~~g~t~~~dgk~l~~~ 403 (459)
T d1fwxa2 328 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ----PGHLKTVMGETLDATNDWLVCL 403 (459)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC----EEEEEETTTTSTTCCSSEEEEE
T ss_pred CcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccC----CCCCccCcCCcCCCCCCEEEEe
Confidence 333447889888865555558999999997432 33334433322 1111 235789999988
Q ss_pred e
Q psy6127 459 S 459 (515)
Q Consensus 459 s 459 (515)
.
T Consensus 404 n 404 (459)
T d1fwxa2 404 S 404 (459)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.95 E-value=0.0052 Score=54.19 Aligned_cols=223 Identities=9% Similarity=0.019 Sum_probs=142.4
Q ss_pred cccCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCC
Q psy6127 218 RENTDKINSLDYSSDGSLLISCS-DDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHD 296 (515)
Q Consensus 218 ~~h~~~I~~l~~spd~~~lasgs-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~ 296 (515)
..+...+.+++|.+..+.+.-.. .++.|+..++..+.....+......+..+++..-+..++.+. ...+.|.+.++..
T Consensus 32 ~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d-~~~~~I~~~~~dg 110 (263)
T d1npea_ 32 HIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD-SQLDRIEVAKMDG 110 (263)
T ss_dssp EEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEE-TTTTEEEEEETTS
T ss_pred ccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEec-cCCCEEEEEecCC
Confidence 34455688899998777666654 568898888876555554544446788999998888888776 4578999999876
Q ss_pred CeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC-C--cEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEEE-CCCc
Q psy6127 297 NKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD-K--TVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIGV-NSDS 371 (515)
Q Consensus 297 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-g--~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~-~dg~ 371 (515)
.............+..+++.|...+++..... + .|.--++............ ..+..+++++.++.|.... ..+.
T Consensus 111 ~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~ 190 (263)
T d1npea_ 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (263)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCE
Confidence 55433344444678999999988877655432 2 3444466554433333222 3467899998888776654 5678
Q ss_pred EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEec
Q psy6127 372 IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTP 450 (515)
Q Consensus 372 i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 450 (515)
|...++...... .+. .... ...++++. +.+|+... ..+.|...|..+++....+...... .+..++..+
T Consensus 191 I~~~~~~g~~~~---~v~--~~~~-~P~~lav~--~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~--~~~gi~v~~ 260 (263)
T d1npea_ 191 AECLNPAQPGRR---KVL--EGLQ-YPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQT--RLYGITIAL 260 (263)
T ss_dssp EEEEETTEEEEE---EEE--ECCC-SEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCC--CCCCEEEEC
T ss_pred EEEEECCCCCeE---EEE--CCCC-CcEEEEEE--CCEEEEEECCCCEEEEEECCCCccceEECCCCCC--CcceEEEeC
Confidence 888888653311 111 1112 23477775 45565554 6688999999888877666432222 244555544
Q ss_pred C
Q psy6127 451 D 451 (515)
Q Consensus 451 ~ 451 (515)
+
T Consensus 261 ~ 261 (263)
T d1npea_ 261 S 261 (263)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.94 E-value=0.00053 Score=64.51 Aligned_cols=278 Identities=10% Similarity=0.001 Sum_probs=146.3
Q ss_pred EEEEEEcCCCCEEEEEeCCC-----------eEEEEECCCCeeee--Ee-cCCCCceeEEEEecCCCeEEEEEeeCCCeE
Q psy6127 224 INSLDYSSDGSLLISCSDDD-----------QIIIYDCEQGTSKN--TI-NSKKYGVDLIKFTHSKTTAIHASTKVDATL 289 (515)
Q Consensus 224 I~~l~~spd~~~lasgs~dg-----------~i~iwd~~~~~~~~--~~-~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v 289 (515)
+.......+|+.++.|+.+. .+.+||..+++-.. .. ..+.......++.+++..++.+ +.....+
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~G-g~~~~~~ 100 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTG-GNDAKKT 100 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEEC-SSSTTCE
T ss_pred cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEee-cCCCcce
Confidence 34444556888888887531 37799999875432 12 2233334566788888655543 3345789
Q ss_pred EEEECCCCeeeEEecC-CCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEcCCCCeEEEEecCC-------------
Q psy6127 290 RYLSLHDNKYVRYFPG-HVRKVSSLNLSPVDDSFISGSYD------KTVRVWDLRQPNNVGMIQLSG------------- 349 (515)
Q Consensus 290 ~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~------------- 349 (515)
.+||..+..-...-.. ....-...+..+||+.++.|+.+ ..+.+||..+.+....-....
T Consensus 101 ~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 180 (387)
T d1k3ia3 101 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 180 (387)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred eEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceee
Confidence 9999988765432211 11223467778889988888753 368999998876543211100
Q ss_pred --CeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC---CCCCcCeEEEEE-cCCCCEEEEEECC-------
Q psy6127 350 --NKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP---GERGCEWTGLKF-SPDGKLILVSTNG------- 416 (515)
Q Consensus 350 --~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~~~i~~l~~-sp~~~~l~~~s~d------- 416 (515)
....+..-++|+.+..+...+.+..++..+............ ......-.++.+ ..+++.++.|+..
T Consensus 181 ~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~ 260 (387)
T d1k3ia3 181 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 260 (387)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred ccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcc
Confidence 011233345666676666666666666554321110000000 000011112333 3356666666532
Q ss_pred -CcEEEEECCCCc---eeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----------CcEEEEECCCCeEEEEEcCC
Q psy6127 417 -SIIRLFDAFNGN---CVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----------GQVHIWNAERGYKVCVLDGD 481 (515)
Q Consensus 417 -g~i~iwd~~~~~---~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----------g~I~iwd~~~~~~~~~~~~~ 481 (515)
....+.+..... ..............-.+....+||++++.|+.+ ..+.+||..+.+-...-...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~ 340 (387)
T d1k3ia3 261 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 340 (387)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred cceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEECCCCC
Confidence 123344433211 111111111111113456667899999998843 14789998877543321111
Q ss_pred CCC-CeEEEEECCCCCEEEEee
Q psy6127 482 HPS-AVQSLQFNPKYHMLASAC 502 (515)
Q Consensus 482 h~~-~V~~l~~sp~~~~las~~ 502 (515)
+.. .-......+||++++.|+
T Consensus 341 ~~R~~Hs~a~l~~dG~v~v~GG 362 (387)
T d1k3ia3 341 IVRVYHSISLLLPDGRVFNGGG 362 (387)
T ss_dssp SCCCTTEEEEECTTSCEEEEEC
T ss_pred CcccceEEEEECCCCEEEEEeC
Confidence 111 112344689999999887
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.90 E-value=0.0063 Score=53.46 Aligned_cols=251 Identities=11% Similarity=0.098 Sum_probs=152.8
Q ss_pred CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEE
Q psy6127 243 DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSF 322 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 322 (515)
.+|.|-|+.++........ ...+.-.+|..+.+++-+ ..++.++|+++.+.++.+.- ..+|.--.|-.+. .|
T Consensus 45 ~~VvIidl~n~~~~~Rrpi---~AdsAIMhP~~~IiALra---g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L 116 (327)
T d1utca2 45 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA---GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TV 116 (327)
T ss_dssp EEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE---TTEEEEEETTTTEEEEEEEC-SSCCCEEEESSSS-EE
T ss_pred ceEEEEECCCCCcceeccc---chhhhhcCCCCcEEEEec---CCeEEEEehhHhhhhceEEc-CCCcEEEEecCCC-EE
Confidence 5788889876553322221 122344678887776665 67899999999999888764 4466666776543 44
Q ss_pred EEEeCCCcEEEEEcCCC-CeEEEEecCC-----CeeEEEECCCCCEEEEEE---C----CCcEEEEEeecCCCCCceeee
Q psy6127 323 ISGSYDKTVRVWDLRQP-NNVGMIQLSG-----NKPIAAYDPEGLAFAIGV---N----SDSIKLYDVRSYDKGPFASFK 389 (515)
Q Consensus 323 ~s~s~dg~i~iwd~~~~-~~~~~~~~~~-----~~~~~~~s~~~~~l~~g~---~----dg~i~i~d~~~~~~~~~~~~~ 389 (515)
+..+ +..|.-|+++.. .+.+.+..+. .+-....+++.++++..+ . .|.+.+|..+... -+
T Consensus 117 ~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~------sQ 189 (327)
T d1utca2 117 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV------SQ 189 (327)
T ss_dssp EEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE------EE
T ss_pred EEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc------Cc
Confidence 4443 467999999543 4556654332 245567788899877643 2 3577888876532 22
Q ss_pred cCCCCCcCeEEEEEcCCC---CEEEEEE---CCCcEEEEECCCCc---e------eEEeeccccCCCCCEEEEEecCCCE
Q psy6127 390 CPGERGCEWTGLKFSPDG---KLILVST---NGSIIRLFDAFNGN---C------VQSLSGVLNNNASPLEATFTPDSQF 454 (515)
Q Consensus 390 ~~~~~~~~i~~l~~sp~~---~~l~~~s---~dg~i~iwd~~~~~---~------~~~~~~~~~~~~~i~~~~~sp~g~~ 454 (515)
...+|.+....+.+..+. +.++.+. ..+.+++.++.... . ...+.........+.++..++....
T Consensus 190 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygi 269 (327)
T d1utca2 190 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 269 (327)
T ss_dssp EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTE
T ss_pred cccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCE
Confidence 223443333333322111 1222222 23678888875421 1 1111112223445688999999999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEeeCCEEEEc
Q psy6127 455 VASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASACSNMAFWI 509 (515)
Q Consensus 455 l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~~~dv~iW~ 509 (515)
++.-+.-|.+++||++++.++..-+- ..++|..-+-+.+..=+++-..++.+..
T Consensus 270 iyviTK~G~i~lyDleTgt~i~~nRI-s~~~iF~~a~~~~~~Gi~~VNr~GqVl~ 323 (327)
T d1utca2 270 VFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKGQVLS 323 (327)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred EEEEecCcEEEEEEcccccEEEEeec-CCCceEEeccCCCCceEEEECCCCeEEE
Confidence 99999999999999999999987775 5667765555554333444444444443
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=97.87 E-value=0.0006 Score=68.04 Aligned_cols=240 Identities=17% Similarity=0.203 Sum_probs=133.6
Q ss_pred CCeEEEEECCCCeeeeEecCCC-------------------------------Cce-eEEEEecCCCeEEEEEee-----
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKK-------------------------------YGV-DLIKFTHSKTTAIHASTK----- 284 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~-------------------------------~~v-~~~~~~~~~~~l~~~s~~----- 284 (515)
.|.|+.+|..+|+.+..+.... ..+ ...++.+....++..++.
T Consensus 189 ~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~ 268 (573)
T d1kb0a2 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (573)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred cceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCcccc
Confidence 4789999999999987763221 111 134556666666554421
Q ss_pred ------------CCCeEEEEECCCCeeeEEecCCC---------CCeEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCC
Q psy6127 285 ------------VDATLRYLSLHDNKYVRYFPGHV---------RKVSSLNLSPVD---DSFISGSYDKTVRVWDLRQPN 340 (515)
Q Consensus 285 ------------~d~~v~vwd~~~~~~~~~~~~h~---------~~v~~l~~~~~~---~~l~s~s~dg~i~iwd~~~~~ 340 (515)
....|...|.++++....++... .+........++ ..++.++.+|.+..+|..+++
T Consensus 269 ~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe 348 (573)
T d1kb0a2 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (573)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred ccccccccccccccceEEEecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEecccccc
Confidence 12357778888888776654321 122222223333 357778899999999999999
Q ss_pred eEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC-CCcCeEEEEEcCCCCEEEEEECC---
Q psy6127 341 NVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE-RGCEWTGLKFSPDGKLILVSTNG--- 416 (515)
Q Consensus 341 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~i~~l~~sp~~~~l~~~s~d--- 416 (515)
.+.............+.+.+..+..- .... .......+... ........+++|+...++....+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~ 416 (573)
T d1kb0a2 349 FISAKNFVPVNWASGYDKHGKPIGIA-----------AARD-GSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPV 416 (573)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECG-----------GGGC-TTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCC
T ss_pred ccccccccccccccccccccceeeee-----------eccc-cccceEEeecccCCccccccccCCCcceEEeeccccce
Confidence 88776544322233333333222110 0000 00001111110 01112234555555444432211
Q ss_pred ----------------------------------------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEE
Q psy6127 417 ----------------------------------------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVA 456 (515)
Q Consensus 417 ----------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 456 (515)
|.+.-||+.+|+.+-........ ..-..+..|.+++
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~----~gg~lstagglVF 492 (573)
T d1kb0a2 417 NLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW----NGGTLTTAGNVVF 492 (573)
T ss_dssp EEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC----CCCEEEETTTEEE
T ss_pred eeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCceEeeecCCCCC----CCceEEEcCCEEE
Confidence 35777888888877666543222 1223444688999
Q ss_pred EEeCCCcEEEEECCCCeEEEEEcCC---CCCCeEEEEECCCCC-EEEE
Q psy6127 457 SGSTDGQVHIWNAERGYKVCVLDGD---HPSAVQSLQFNPKYH-MLAS 500 (515)
Q Consensus 457 sgs~dg~I~iwd~~~~~~~~~~~~~---h~~~V~~l~~sp~~~-~las 500 (515)
+|+.||.++.+|.++|+.+-+++.. +..+ +.|..+|+ |++.
T Consensus 493 ~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P---~ty~~~GkQYv~v 537 (573)
T d1kb0a2 493 QGTADGRLVAYHAATGEKLWEAPTGTGVVAAP---STYMVDGRQYVSV 537 (573)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTEEEEEE
T ss_pred EECCCCeEEEEECCCCcEeEEEECCCCccccC---EEEEECCEEEEEE
Confidence 9999999999999999999887642 2233 34445675 4443
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=97.86 E-value=0.00092 Score=66.41 Aligned_cols=243 Identities=11% Similarity=0.112 Sum_probs=135.5
Q ss_pred CeEEEEECCCCeeeeEecCCC------------------------------Cce-eEEEEecCCCeEEEEEee-------
Q psy6127 243 DQIIIYDCEQGTSKNTINSKK------------------------------YGV-DLIKFTHSKTTAIHASTK------- 284 (515)
Q Consensus 243 g~i~iwd~~~~~~~~~~~~~~------------------------------~~v-~~~~~~~~~~~l~~~s~~------- 284 (515)
|.|.-+|.++|+.+..+..-. ..+ ..+++.+....+++.++.
T Consensus 178 G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~ 257 (560)
T d1kv9a2 178 GFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNRE 257 (560)
T ss_dssp CEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHH
T ss_pred ceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccc
Confidence 679999999999988764210 111 125666777766665431
Q ss_pred ----------CCCeEEEEECCCCeeeEEecCCCCCe---------EEEEEcCCCC---EEEEEeCCCcEEEEEcCCCCeE
Q psy6127 285 ----------VDATLRYLSLHDNKYVRYFPGHVRKV---------SSLNLSPVDD---SFISGSYDKTVRVWDLRQPNNV 342 (515)
Q Consensus 285 ----------~d~~v~vwd~~~~~~~~~~~~h~~~v---------~~l~~~~~~~---~l~s~s~dg~i~iwd~~~~~~~ 342 (515)
....|.-.|+++++....++.....+ .-+....+++ .++.++.+|.+.++|..+++.+
T Consensus 258 ~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i 337 (560)
T d1kv9a2 258 VRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (560)
T ss_dssp HHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cccccCCccccceeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCccc
Confidence 13567888999999876664322211 2222233343 5777889999999999999988
Q ss_pred EEEecCCCeeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecCCC-CCcCeEEEEEcCCCCEEEEEEC------
Q psy6127 343 GMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCPGE-RGCEWTGLKFSPDGKLILVSTN------ 415 (515)
Q Consensus 343 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~i~~l~~sp~~~~l~~~s~------ 415 (515)
...........-..++..... +........ ......+... ........+++|+...+++...
T Consensus 338 ~~~~~~~~~~~~~~d~~~~~~----------~~~~~~~~~-~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~ 406 (560)
T d1kv9a2 338 SAEKFGKVTWAEKVDLATGRP----------VEAPGVRYE-KEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVY 406 (560)
T ss_dssp EEEESSCCCSEEEECTTTCCE----------EECTTTTCS-SSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEE
T ss_pred ccccccccccccccChhhccc----------ccccccccc-ccceeeeeccccccccccccccCCCCeeeccccccccee
Confidence 766544322222222211100 000000000 0000001000 0111224555555554443321
Q ss_pred ------------------------------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 416 ------------------------------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 416 ------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
.|.+.-||+.+++.+-....... ...-.+.-.|.++++|+.||.++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~~----~~gg~l~TagglVF~G~~dg~l~ 482 (560)
T d1kv9a2 407 RNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH----WNGGTLSTAGNLVFQGTAAGQMH 482 (560)
T ss_dssp CCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS----CCCCEEEETTTEEEEECTTSEEE
T ss_pred eccccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCCCC----CCCceeEECCCEEEEECCCCcEE
Confidence 24678899999988776654322 22223444678889999999999
Q ss_pred EEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEE
Q psy6127 466 IWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLAS 500 (515)
Q Consensus 466 iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las 500 (515)
.+|.++|+.+-+++......-.=+.+..+|+ +++.
T Consensus 483 A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v 518 (560)
T d1kv9a2 483 AYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAI 518 (560)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EEECCCCcEeEEEECCCCccccCEEEEECCEEEEEE
Confidence 9999999999888752211111244445675 5443
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.85 E-value=0.0077 Score=52.92 Aligned_cols=227 Identities=13% Similarity=0.189 Sum_probs=141.1
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCC-eeeEEecCC
Q psy6127 228 DYSSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDN-KYVRYFPGH 306 (515)
Q Consensus 228 ~~spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~-~~~~~~~~h 306 (515)
-.+|..+.||.-+ ..++.++|+++.+.++.+...+ +|.--.|-.+. .+.+++ +..|+-|+++.. .+.+.+..|
T Consensus 69 IMhP~~~IiALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~-~L~lVT---~taVYHW~~~g~s~P~k~fdR~ 142 (327)
T d1utca2 69 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT---DNAVYHWSMEGESQPVKMFDRH 142 (327)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEESSSS-EEEEEC---SSEEEEEESSSSCCCEEEEECC
T ss_pred hcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCC-CcEEEEecCCC-EEEEEc---CCceEEEcccCCCCchhhhhhc
Confidence 3678888887766 4689999999999988887664 56666776554 566665 889999999543 466666655
Q ss_pred C----CCeEEEEEcCCCCEEEEEe---C----CCcEEEEEcCCCCeEEEEecCCCeeEEEECCCC-----CEEEEEE---
Q psy6127 307 V----RKVSSLNLSPVDDSFISGS---Y----DKTVRVWDLRQPNNVGMIQLSGNKPIAAYDPEG-----LAFAIGV--- 367 (515)
Q Consensus 307 ~----~~v~~l~~~~~~~~l~s~s---~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~s~~~-----~~l~~g~--- 367 (515)
. ..|..-..+++.++++..+ . .|.+.+|..+.+... .+..+. ..-..+-.+| ..++.+.
T Consensus 143 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ-~ieGha-a~F~~~~~~g~~~~~~lf~fa~r~~ 220 (327)
T d1utca2 143 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHA-ASFAQFKMEGNAEESTLFCFAVRGQ 220 (327)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-EECCSE-EEEEEECCTTCSSCEEEEEEEEEET
T ss_pred ccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCc-ccccee-eeeEEEEcCCCCCCceEEEEEECCC
Confidence 4 4677778888888766543 2 367889988765322 221111 1111121111 1233322
Q ss_pred CCCcEEEEEeecCCC--CCc--eeeec---CCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccccCC
Q psy6127 368 NSDSIKLYDVRSYDK--GPF--ASFKC---PGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNN 440 (515)
Q Consensus 368 ~dg~i~i~d~~~~~~--~~~--~~~~~---~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 440 (515)
..+.+++.++..... .+. +.... +.....-.-++..|+....++.-+.-|.+++||+.++.++..-+-..
T Consensus 221 ~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~--- 297 (327)
T d1utca2 221 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG--- 297 (327)
T ss_dssp TEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS---
T ss_pred CCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCC---
Confidence 336888998876432 111 11111 22223334489999988899999999999999999999887655422
Q ss_pred CCCEEEEEecCCCEEEEEeCCCcEE
Q psy6127 441 ASPLEATFTPDSQFVASGSTDGQVH 465 (515)
Q Consensus 441 ~~i~~~~~sp~g~~l~sgs~dg~I~ 465 (515)
..|...+-+.+..=+++...+|.|.
T Consensus 298 ~~iF~~a~~~~~~Gi~~VNr~GqVl 322 (327)
T d1utca2 298 ETIFVTAPHEATAGIIGVNRKGQVL 322 (327)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEE
T ss_pred CceEEeccCCCCceEEEECCCCeEE
Confidence 2255444444444444445666554
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.83 E-value=0.0035 Score=62.18 Aligned_cols=263 Identities=12% Similarity=0.081 Sum_probs=150.6
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCC----CceeEEEEecCCCeEEEEEee----CCCeEEEEECCCCeeeEEecC
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKK----YGVDLIKFTHSKTTAIHASTK----VDATLRYLSLHDNKYVRYFPG 305 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~s~~----~d~~v~vwd~~~~~~~~~~~~ 305 (515)
..++.++.||.+.-.|.++|+......... ..++.--.-.+ ..+++.... ..|.|+-+|..+|+.+.++..
T Consensus 116 ~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~-~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t 194 (571)
T d2ad6a1 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeC-CeEEEeeccccccccCcEEEEECCCCcEEEEEec
Confidence 457778889999999999998876654221 11111111112 334443321 368899999999998876532
Q ss_pred CC-------------------------------------CCe-EEEEEcCCCCEEEEEeC----------------CCcE
Q psy6127 306 HV-------------------------------------RKV-SSLNLSPVDDSFISGSY----------------DKTV 331 (515)
Q Consensus 306 h~-------------------------------------~~v-~~l~~~~~~~~l~s~s~----------------dg~i 331 (515)
.. ..+ ...++.++...++.+.. ...+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~sv 274 (571)
T d2ad6a1 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred cCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccce
Confidence 10 112 23456666666655543 2457
Q ss_pred EEEEcCCCCeEEEEecCC-C---------eeEEEECCCCC---EEEEEECCCcEEEEEeecCCCCCc-------------
Q psy6127 332 RVWDLRQPNNVGMIQLSG-N---------KPIAAYDPEGL---AFAIGVNSDSIKLYDVRSYDKGPF------------- 385 (515)
Q Consensus 332 ~iwd~~~~~~~~~~~~~~-~---------~~~~~~s~~~~---~l~~g~~dg~i~i~d~~~~~~~~~------------- 385 (515)
.-.|.++++.+..++... . .....+..+++ .++.++.+|.+.++|..+++....
T Consensus 275 vAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~ 354 (571)
T d2ad6a1 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKV 354 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred eeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccccccc
Confidence 788999999887775321 1 11122222443 356677888888888776541100
Q ss_pred --------------------eeeecCCCC-CcCeEEEEEcCCCCEEEEEECC----------------------------
Q psy6127 386 --------------------ASFKCPGER-GCEWTGLKFSPDGKLILVSTNG---------------------------- 416 (515)
Q Consensus 386 --------------------~~~~~~~~~-~~~i~~l~~sp~~~~l~~~s~d---------------------------- 416 (515)
....+.... .......+++|+...+++...+
T Consensus 355 ~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (571)
T d2ad6a1 355 DLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPG 434 (571)
T ss_dssp CTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred cccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeeccc
Confidence 000000000 0112246778877766654322
Q ss_pred ---------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeE
Q psy6127 417 ---------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQ 487 (515)
Q Consensus 417 ---------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 487 (515)
|.+.-+|+.+|+.+-........ .+-..+..+.++++|+.||.++.+|.++|+.+-++.......-.
T Consensus 435 ~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~----~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~ 510 (571)
T d2ad6a1 435 PNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAA----WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGS 510 (571)
T ss_dssp TTSTTSCCCEEEEEECTTTCCEEEEEEESSCC----CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred cCCcccCCcccEEEeccCCCceeeEcCCCCCC----CcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceec
Confidence 35777788888876655432221 11123335778889999999999999999999888642221112
Q ss_pred EEEECCCCC-EEEEe
Q psy6127 488 SLQFNPKYH-MLASA 501 (515)
Q Consensus 488 ~l~~sp~~~-~las~ 501 (515)
-+.|..||+ |++..
T Consensus 511 P~ty~~dGkqYi~v~ 525 (571)
T d2ad6a1 511 PMTYSFKGKQYIGSM 525 (571)
T ss_dssp CEEEEETTEEEEEEE
T ss_pred ceEEEECCEEEEEEE
Confidence 244555775 55443
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.79 E-value=0.01 Score=52.37 Aligned_cols=235 Identities=12% Similarity=0.024 Sum_probs=142.8
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEECCCCe----eeEEecCCCCCe
Q psy6127 235 LLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSLHDNK----YVRYFPGHVRKV 310 (515)
Q Consensus 235 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~----~~~~~~~h~~~v 310 (515)
+|+.+.. ..|+-.++.+.+....+. ....+..++|.+..+.++.+- ...+.|...++.... ...........+
T Consensus 3 fLl~s~~-~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D-~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p 79 (266)
T d1ijqa1 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (266)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEE-TTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEECC-CeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEE-CCCCEEEEEEecCCCCCcceEEEEeCCCCCc
Confidence 3444443 458888887655444333 445678999999998888765 356778777765322 122233334557
Q ss_pred EEEEEcCCCCEEEEEe-CCCcEEEEEcCCCCeEEEEec-CCCeeEEEECCCCCEEEEEECC--CcEEEEEeecCCCCCce
Q psy6127 311 SSLNLSPVDDSFISGS-YDKTVRVWDLRQPNNVGMIQL-SGNKPIAAYDPEGLAFAIGVNS--DSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~d--g~i~i~d~~~~~~~~~~ 386 (515)
..+++.+.+..|+.+. ..+.|.+.++........... ......++++|...++...... +.|.-.++....
T Consensus 80 ~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~----- 154 (266)
T d1ijqa1 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----- 154 (266)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-----
T ss_pred ceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc-----
Confidence 7889987777666554 567899999987765554433 3457889999976666655433 345555554322
Q ss_pred eeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE-eCCCcE
Q psy6127 387 SFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG-STDGQV 464 (515)
Q Consensus 387 ~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg-s~dg~I 464 (515)
.............++++++.++.|+.+. ..+.|...++............. ....+..+++. +.+|+.. ..++.|
T Consensus 155 ~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~-~~~~p~~lav~--~~~ly~td~~~~~I 231 (266)
T d1ijqa1 155 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVF--EDKVFWTDIINEAI 231 (266)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT-TTSSEEEEEEE--TTEEEEEETTTTEE
T ss_pred eecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCC-cccccEEEEEE--CCEEEEEECCCCeE
Confidence 1111122234567999999888777664 56788888986554433333222 22225667776 3445444 466788
Q ss_pred EEEECCCCeEEEEEcC
Q psy6127 465 HIWNAERGYKVCVLDG 480 (515)
Q Consensus 465 ~iwd~~~~~~~~~~~~ 480 (515)
+..+..+++....+..
T Consensus 232 ~~~~~~~g~~~~~~~~ 247 (266)
T d1ijqa1 232 FSANRLTGSDVNLLAE 247 (266)
T ss_dssp EEEETTTCCCCEEEEC
T ss_pred EEEECCCCcceEEEEc
Confidence 8888877765555543
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.78 E-value=0.0024 Score=63.67 Aligned_cols=226 Identities=12% Similarity=0.111 Sum_probs=118.6
Q ss_pred EEEEecCCCeEEEEEee----------------------CCCeEEEEECCCCeeeEEecC--CCCC-------eEEEEEc
Q psy6127 268 LIKFTHSKTTAIHASTK----------------------VDATLRYLSLHDNKYVRYFPG--HVRK-------VSSLNLS 316 (515)
Q Consensus 268 ~~~~~~~~~~l~~~s~~----------------------~d~~v~vwd~~~~~~~~~~~~--h~~~-------v~~l~~~ 316 (515)
.+++.+....+++.++. ....+.-.|.++++....++. |.-. ..-+.+.
T Consensus 250 ~~s~D~~~~~vy~~tgn~~p~~~~~~~~~g~~~~~~dn~ys~SvvAld~~tG~~~W~~q~~~~D~wd~d~~~~p~l~d~~ 329 (582)
T d1flga_ 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred cceeccccceEEeccCCcccccccccccCCCCcCcccccccceeEEecccchhhhhcccccccccccccccccccccccc
Confidence 36777777777776632 134677889999988766643 3211 1112221
Q ss_pred -CCCC---EEEEEeCCCcEEEEEcCCCCeEEEEecCCC-eeEEEECCCCCEEEEEECCCcEEEEEeecCCCCCceeeecC
Q psy6127 317 -PVDD---SFISGSYDKTVRVWDLRQPNNVGMIQLSGN-KPIAAYDPEGLAFAIGVNSDSIKLYDVRSYDKGPFASFKCP 391 (515)
Q Consensus 317 -~~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~~~ 391 (515)
.+++ .++.++.++.+.+.|.++++.+........ ............... .++............. .....++
T Consensus 330 ~~~g~~~~~v~~~~k~g~~~vldr~tG~~i~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~P 406 (582)
T d1flga_ 330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE--REGQRPPLPEPGQKHG-KAVEVSP 406 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE--CTTCSCCCCCTTCSSC-CCEEESS
T ss_pred cccccccceeEeecccccEEeecccCCcccccccccCcccccccccccccccee--cccccccccccccccc-ceEEECC
Confidence 2233 567788999999999999998776543322 222222221111100 0000000000000000 0001111
Q ss_pred CC-CCcCeEEEEEcCCCCEEEEEE---------------------------------CCCcEEEEECCCCceeEEeeccc
Q psy6127 392 GE-RGCEWTGLKFSPDGKLILVST---------------------------------NGSIIRLFDAFNGNCVQSLSGVL 437 (515)
Q Consensus 392 ~~-~~~~i~~l~~sp~~~~l~~~s---------------------------------~dg~i~iwd~~~~~~~~~~~~~~ 437 (515)
.. ........+++|+...+++.. ..|.+.-+|+.+|+..-......
T Consensus 407 ~~~gg~~w~~~a~dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~i~W~~~~~~ 486 (582)
T d1flga_ 407 PFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL 486 (582)
T ss_dssp CTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS
T ss_pred CccCCcccccceecCCCCceeeeccccccccccccccccccccccccCccccccccCCCCeEEEEcCCCCcEEeecCCCC
Confidence 10 111122345555443333221 12568888999998877766433
Q ss_pred cCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCC-EEEE
Q psy6127 438 NNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH-MLAS 500 (515)
Q Consensus 438 ~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~las 500 (515)
. +..-..+..|.++++|+.||.++.+|.++|+.+-+++......-.=+.|..+|+ |++.
T Consensus 487 p----~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~i 546 (582)
T d1flga_ 487 P----LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp C----CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred C----CccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEE
Confidence 2 222234456888999999999999999999999888752211111245566775 5544
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.74 E-value=0.0039 Score=62.16 Aligned_cols=260 Identities=13% Similarity=0.116 Sum_probs=151.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCC----ceeEEEEecCCCeEEEEEee----CCCeEEEEECCCCeeeEEec
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKY----GVDLIKFTHSKTTAIHASTK----VDATLRYLSLHDNKYVRYFP 304 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~s~~----~d~~v~vwd~~~~~~~~~~~ 304 (515)
+.+++.++.|+.+.-.|.++|+.+..+..... .++.--.- .+..+++.+++ ..|.|+-+|..+|+.+.++.
T Consensus 121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v-~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~ 199 (596)
T d1w6sa_ 121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (596)
T ss_dssp CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ceEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcE-ECCeEEEeeccccccccCceEEEECCCCcEEEEee
Confidence 34688888999999999999999887743211 11110000 13345554422 35899999999999987653
Q ss_pred CCC-------------------------------------CC-eEEEEEcCCCCEEEEEeC----------------CCc
Q psy6127 305 GHV-------------------------------------RK-VSSLNLSPVDDSFISGSY----------------DKT 330 (515)
Q Consensus 305 ~h~-------------------------------------~~-v~~l~~~~~~~~l~s~s~----------------dg~ 330 (515)
... .. -..+.+.+....++.+.. ...
T Consensus 200 t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~s 279 (596)
T d1w6sa_ 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (596)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred ccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccc
Confidence 110 11 123455666666665533 234
Q ss_pred EEEEEcCCCCeEEEEecCCC----------eeEEE-ECCCCC---EEEEEECCCcEEEEEeecCCCCCceee--------
Q psy6127 331 VRVWDLRQPNNVGMIQLSGN----------KPIAA-YDPEGL---AFAIGVNSDSIKLYDVRSYDKGPFASF-------- 388 (515)
Q Consensus 331 i~iwd~~~~~~~~~~~~~~~----------~~~~~-~s~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~-------- 388 (515)
+.-.|+++++.+-.++.... ...+. ...+|+ .++....+|.+.++|..+++.......
T Consensus 280 ivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~ 359 (596)
T d1w6sa_ 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (596)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred ccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccccc
Confidence 77889999998887743211 11111 223443 466777888999998876541100000
Q ss_pred -------------------------ecCCC-CCcCeEEEEEcCCCCEEEEEEC---------------------------
Q psy6127 389 -------------------------KCPGE-RGCEWTGLKFSPDGKLILVSTN--------------------------- 415 (515)
Q Consensus 389 -------------------------~~~~~-~~~~i~~l~~sp~~~~l~~~s~--------------------------- 415 (515)
.+... ........+++|+..+++....
T Consensus 360 ~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (596)
T d1w6sa_ 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (596)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccccccccccccc
Confidence 00000 0011224567777666554321
Q ss_pred ------------CCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEEcCC--
Q psy6127 416 ------------GSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNAERGYKVCVLDGD-- 481 (515)
Q Consensus 416 ------------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-- 481 (515)
-|.+.-||..+++..-....... ...-.++..|.+++.|+.||.++.+|.++|+.+-+++..
T Consensus 440 ~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~~----~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~ 515 (596)
T d1w6sa_ 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA----VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (596)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC----CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cCcccCcccCCCcceEEEEeCCCCceecccCCCCC----CccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCC
Confidence 14577788888877655432221 222233446788889999999999999999999888642
Q ss_pred -CCCCeEEEEECCCCC-EEEE
Q psy6127 482 -HPSAVQSLQFNPKYH-MLAS 500 (515)
Q Consensus 482 -h~~~V~~l~~sp~~~-~las 500 (515)
+..++ .|.-+|+ |++.
T Consensus 516 ~~a~P~---tY~~dGkQYvav 533 (596)
T d1w6sa_ 516 AIGYPM---TYTHKGTQYVAI 533 (596)
T ss_dssp CCSCCE---EEEETTEEEEEE
T ss_pred cccCCe---EEEECCEEEEEE
Confidence 23343 3444665 4543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.48 E-value=0.019 Score=53.25 Aligned_cols=259 Identities=8% Similarity=0.016 Sum_probs=135.4
Q ss_pred EEEccceeeeeEeeeec-cccCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCeeeeEecCC-CCceeEEEEecCCCe
Q psy6127 201 TKCSENLVRSYRVAKVF-RENTDKINSLDYSSDGSLLISCSDD-DQIIIYDCEQGTSKNTINSK-KYGVDLIKFTHSKTT 277 (515)
Q Consensus 201 i~~wd~~~~~~~~~~~~-~~h~~~I~~l~~spd~~~lasgs~d-g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~ 277 (515)
+.+||.....|...... ..|.......++.++|++++.|+.+ ..+.+||..+..-...-... ...-...+..+++..
T Consensus 54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v 133 (387)
T d1k3ia3 54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRV 133 (387)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCE
T ss_pred EEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCce
Confidence 45676444445433322 2333334466788999999988765 68999999876553322111 122345666778876
Q ss_pred EEEEEeeC----CCeEEEEECCCCeeeEEec---------CCC-----CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q psy6127 278 AIHASTKV----DATLRYLSLHDNKYVRYFP---------GHV-----RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQP 339 (515)
Q Consensus 278 l~~~s~~~----d~~v~vwd~~~~~~~~~~~---------~h~-----~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~ 339 (515)
+++..... ...+.+||..+.+-...-. .+. ..-..+...++|+.++.++.++.+.++|..+.
T Consensus 134 ~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~ 213 (387)
T d1k3ia3 134 FTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG 213 (387)
T ss_dssp EEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTC
T ss_pred eeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccC
Confidence 55543211 2468999998875432110 010 01112233456777777777777888887776
Q ss_pred CeEEEEec--CC-------CeeEE-EECCCCCEEEEEECC--------CcEEEEEeecCCCCCceeeecC-CCCCcCeEE
Q psy6127 340 NNVGMIQL--SG-------NKPIA-AYDPEGLAFAIGVNS--------DSIKLYDVRSYDKGPFASFKCP-GERGCEWTG 400 (515)
Q Consensus 340 ~~~~~~~~--~~-------~~~~~-~~s~~~~~l~~g~~d--------g~i~i~d~~~~~~~~~~~~~~~-~~~~~~i~~ 400 (515)
........ .. ...++ .-..+++.++.|+.. ....+.++.............. ......-.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 293 (387)
T d1k3ia3 214 DVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHT 293 (387)
T ss_dssp EEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCE
T ss_pred cEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceeeccccccccccce
Confidence 54433211 00 01122 223466677776532 1334444433221111111111 111122235
Q ss_pred EEEcCCCCEEEEEECC-----------CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeC
Q psy6127 401 LKFSPDGKLILVSTNG-----------SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGST 460 (515)
Q Consensus 401 l~~sp~~~~l~~~s~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~ 460 (515)
....++++.+++|+.+ .++.+||..+.+-.. +.........-....+.+||+.++.|+.
T Consensus 294 ~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~-~~~~~~~R~~Hs~a~l~~dG~v~v~GG~ 363 (387)
T d1k3ia3 294 SVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGRVFNGGGG 363 (387)
T ss_dssp EEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEE-CCCCCCcccceEEEEECCCCEEEEEeCC
Confidence 6667899988888743 147889987765422 2111111111123456799999999874
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.36 E-value=0.065 Score=50.61 Aligned_cols=248 Identities=13% Similarity=0.118 Sum_probs=129.4
Q ss_pred ccCCcEEEEEEcCCCCEEEEEe-CC----CeEEEEECCCCeeeeEecCCCCceeEEEEecCCCeEEEEEee---------
Q psy6127 219 ENTDKINSLDYSSDGSLLISCS-DD----DQIIIYDCEQGTSKNTINSKKYGVDLIKFTHSKTTAIHASTK--------- 284 (515)
Q Consensus 219 ~h~~~I~~l~~spd~~~lasgs-~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~--------- 284 (515)
++.-.+..+++|||++++|.+- .+ ..++++|+.+++.+...- .......++|.+++..++...-.
T Consensus 122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~ 200 (430)
T d1qfma1 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (430)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-ccccccceEEcCCCCEEEEEEeccccCccccc
Confidence 4444456678899999988543 22 479999999998764221 11123568899999988876421
Q ss_pred -----CCCeEEEEECCCCee--eEEecCC--CCCeEEEEEcCCCCEEEEEeC---CCcEEEE--EcCCCC--------eE
Q psy6127 285 -----VDATLRYLSLHDNKY--VRYFPGH--VRKVSSLNLSPVDDSFISGSY---DKTVRVW--DLRQPN--------NV 342 (515)
Q Consensus 285 -----~d~~v~vwd~~~~~~--~~~~~~h--~~~v~~l~~~~~~~~l~s~s~---dg~i~iw--d~~~~~--------~~ 342 (515)
....|..+.+.+... ...+... ...+..+..++++++++.... ++...+| |+.... ..
T Consensus 201 ~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 280 (430)
T d1qfma1 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (430)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCccccccccccee
Confidence 123678888766532 2334433 345677888999997664332 3333444 543321 11
Q ss_pred EEEecCCCeeEEEECCCCCEEEEEE----CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCC
Q psy6127 343 GMIQLSGNKPIAAYDPEGLAFAIGV----NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGS 417 (515)
Q Consensus 343 ~~~~~~~~~~~~~~s~~~~~l~~g~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg 417 (515)
..............+ ++..+..-+ .++.+...++..........+. ..+...+..-.+...+.+|+... .++
T Consensus 281 ~~~~~~~~~~~~~~~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi--~~~~~~~~~~~~~~~~~~lvl~~~~~~ 357 (430)
T d1qfma1 281 KLIDNFEGEYDYVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV--PEHEKDVLEWVACVRSNFLVLCYLHDV 357 (430)
T ss_dssp EEECSSSSCEEEEEE-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEE--CCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred EeecccccceEEEec-CCceeecccCcccccceeEEecCCCCccccceEEe--cccCcceeeeEEEEECCEEEEEEEcCC
Confidence 122111111112222 333333322 2355555565543322112221 22333333333444455666554 443
Q ss_pred --cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCCEEEEE--e--CCCcEEEEECCCCe
Q psy6127 418 --IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQFVASG--S--TDGQVHIWNAERGY 473 (515)
Q Consensus 418 --~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sg--s--~dg~I~iwd~~~~~ 473 (515)
.|++++..++........ ....+..+...++...+... + .-.+++-+|+.+++
T Consensus 358 ~~~l~v~~~~~~~~~~~~~~---~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~ 416 (430)
T d1qfma1 358 KNTLQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (430)
T ss_dssp EEEEEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EeEEEEEECCCCcEEEecCC---CCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence 588899888776544322 22224444444444433322 2 23678889998875
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.044 Score=48.04 Aligned_cols=210 Identities=12% Similarity=0.033 Sum_probs=133.8
Q ss_pred cCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCe----eeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEEC
Q psy6127 220 NTDKINSLDYSSDGSLLISCS-DDDQIIIYDCEQGT----SKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLSL 294 (515)
Q Consensus 220 h~~~I~~l~~spd~~~lasgs-~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd~ 294 (515)
....+.+++|++..+.|.-.. .++.|.-.++.... ....+......+..+++.+.+..++.+. ...+.|.+.++
T Consensus 28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d-~~~~~I~v~~~ 106 (266)
T d1ijqa1 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVLGTVSVADT 106 (266)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEEEEET
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEe-cCCCEEEeEec
Confidence 455678999999877776654 45667766664321 1222333345677899999888888876 46789999999
Q ss_pred CCCeeeEEecCCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCCeEEEEecC-CCeeEEEECCCCCEEEEE-ECCC
Q psy6127 295 HDNKYVRYFPGHVRKVSSLNLSPVDDSFISGS--YDKTVRVWDLRQPNNVGMIQLS-GNKPIAAYDPEGLAFAIG-VNSD 370 (515)
Q Consensus 295 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g-~~dg 370 (515)
..................+++.|...+++... ..+.|.-.++............ .....+++++.++.|..+ ...+
T Consensus 107 ~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~ 186 (266)
T d1ijqa1 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (266)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcC
Confidence 87766555555667789999999776665544 3445766777655444443322 346789999988777666 4567
Q ss_pred cEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCceeEEeec
Q psy6127 371 SIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVST-NGSIIRLFDAFNGNCVQSLSG 435 (515)
Q Consensus 371 ~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~ 435 (515)
.|...++..... ..+...........++++. +.+|+.+. .++.|...+..+++....+..
T Consensus 187 ~I~~~~~dG~~~---~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~~~~~~~~ 247 (266)
T d1ijqa1 187 SISSIDVNGGNR---KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (266)
T ss_dssp EEEEEETTSCSC---EEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEEEECCCCCE---EEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEEECCCCcceEEEEc
Confidence 888888765331 1222122222234467775 34555554 667888888777776655543
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.11 E-value=0.1 Score=49.10 Aligned_cols=227 Identities=11% Similarity=0.033 Sum_probs=119.8
Q ss_pred ceeEEEEecCCCeEEEEE---eeCCCeEEEEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCC-------------
Q psy6127 265 GVDLIKFTHSKTTAIHAS---TKVDATLRYLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYD------------- 328 (515)
Q Consensus 265 ~v~~~~~~~~~~~l~~~s---~~~d~~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d------------- 328 (515)
.+...+++|++++++++. |+....++++|+.+++.+..... ......++|.+|++.|+....|
T Consensus 126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~ 204 (430)
T d1qfma1 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (430)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcCCCCEEEEEEeccccCccccccccc
Confidence 345567899999888764 22334799999999987643211 1123568999999977655432
Q ss_pred ---CcEEEEEcCCCCeE--EEEecC---CCeeEEEECCCCCEEEEEEC---CCcEEEE--EeecCCCCCce---eeecCC
Q psy6127 329 ---KTVRVWDLRQPNNV--GMIQLS---GNKPIAAYDPEGLAFAIGVN---SDSIKLY--DVRSYDKGPFA---SFKCPG 392 (515)
Q Consensus 329 ---g~i~iwd~~~~~~~--~~~~~~---~~~~~~~~s~~~~~l~~g~~---dg~i~i~--d~~~~~~~~~~---~~~~~~ 392 (515)
..|..+.+.+.... ..+... .....+..++++++++.... ++...+| |+......... ......
T Consensus 205 ~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 284 (430)
T d1qfma1 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (430)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeec
Confidence 25777777775432 333222 12445778999998775433 3334444 44432211100 001111
Q ss_pred CCCcCeEEEEEcCCCCEEEEEE---CCCcEEEEECCCCce--eEEeeccccCCCCCEEEEEecCCCEEEEE-eCCC--cE
Q psy6127 393 ERGCEWTGLKFSPDGKLILVST---NGSIIRLFDAFNGNC--VQSLSGVLNNNASPLEATFTPDSQFVASG-STDG--QV 464 (515)
Q Consensus 393 ~~~~~i~~l~~sp~~~~l~~~s---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~i~~~~~sp~g~~l~sg-s~dg--~I 464 (515)
.......-+ -+.++.+++... .++.+...++..... ...+..+ +...+..-.+...+.+|+.. ..++ .|
T Consensus 285 ~~~~~~~~~-~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~--~~~~~~~~~~~~~~~~lvl~~~~~~~~~l 361 (430)
T d1qfma1 285 NFEGEYDYV-TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE--HEKDVLEWVACVRSNFLVLCYLHDVKNTL 361 (430)
T ss_dssp SSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECC--CSSCEEEEEEEETTTEEEEEEEETTEEEE
T ss_pred ccccceEEE-ecCCceeecccCcccccceeEEecCCCCccccceEEecc--cCcceeeeEEEEECCEEEEEEEcCCEeEE
Confidence 112222222 222233333332 235566666654432 1222211 11123333444455566544 4554 58
Q ss_pred EEEECCCCeEEEEEcCCCCCCeEEEEECCCCC
Q psy6127 465 HIWNAERGYKVCVLDGDHPSAVQSLQFNPKYH 496 (515)
Q Consensus 465 ~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 496 (515)
++++..+++....... ..+.|..+...++..
T Consensus 362 ~v~~~~~~~~~~~~~~-~~~sv~~~~~~~~~~ 392 (430)
T d1qfma1 362 QLHDLATGALLKIFPL-EVGSVVGYSGQKKDT 392 (430)
T ss_dssp EEEETTTCCEEEEECC-CSSEEEEEECCTTCS
T ss_pred EEEECCCCcEEEecCC-CCceEeeccCCCCCC
Confidence 8999998887666554 456677666666544
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.09 E-value=0.043 Score=54.27 Aligned_cols=209 Identities=14% Similarity=0.080 Sum_probs=122.4
Q ss_pred CCeEEEEECCCCeeeeEecCCC-------------------------------------C-ceeEEEEecCCCeEEEEEe
Q psy6127 242 DDQIIIYDCEQGTSKNTINSKK-------------------------------------Y-GVDLIKFTHSKTTAIHAST 283 (515)
Q Consensus 242 dg~i~iwd~~~~~~~~~~~~~~-------------------------------------~-~v~~~~~~~~~~~l~~~s~ 283 (515)
.|.|+-+|..+|+.+.++.... . .-..+++.+....+++.++
T Consensus 181 ~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg 260 (596)
T d1w6sa_ 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (596)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred cCceEEEECCCCcEEEEeeccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccc
Confidence 4899999999999988754211 0 1123466677777777654
Q ss_pred eC--------------CCeEEEEECCCCeeeEEecC--CC-------CCeEEEEE-cCCCC---EEEEEeCCCcEEEEEc
Q psy6127 284 KV--------------DATLRYLSLHDNKYVRYFPG--HV-------RKVSSLNL-SPVDD---SFISGSYDKTVRVWDL 336 (515)
Q Consensus 284 ~~--------------d~~v~vwd~~~~~~~~~~~~--h~-------~~v~~l~~-~~~~~---~l~s~s~dg~i~iwd~ 336 (515)
.. ...+...|.++|+.+..++. |. .....+.. ..+|+ .++.+..+|.+.++|.
T Consensus 261 ~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr 340 (596)
T d1w6sa_ 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 340 (596)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEET
T ss_pred cccccccccccccccccccccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecC
Confidence 31 45688899999998876643 22 11222222 23443 6778899999999999
Q ss_pred CCCCeEEEEecCCC----------------------------------------eeEEEECCCCCEEEEEECC-------
Q psy6127 337 RQPNNVGMIQLSGN----------------------------------------KPIAAYDPEGLAFAIGVNS------- 369 (515)
Q Consensus 337 ~~~~~~~~~~~~~~----------------------------------------~~~~~~s~~~~~l~~g~~d------- 369 (515)
.+++.+........ -...+++|+..++.....+
T Consensus 341 ~tG~~i~~~~~~~~~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~ 420 (596)
T d1w6sa_ 341 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEP 420 (596)
T ss_dssp TTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCceeeeccccccccccccccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEeccccccccccc
Confidence 99988765432110 0123566666666554332
Q ss_pred --------------------------------CcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCC
Q psy6127 370 --------------------------------DSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGS 417 (515)
Q Consensus 370 --------------------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg 417 (515)
|.+.-||+.+++..- ....... +.+-.++..|..++.|+.||
T Consensus 421 ~~~~~~~g~~~~g~~~~~~~~~~g~~~~~~~~G~l~A~D~~TG~~~W--~~~~~~~----~~gg~lsTagglVF~G~~Dg 494 (596)
T d1w6sa_ 421 FMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKW--EKMERFA----VWGGTMATAGDLVFYGTLDG 494 (596)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEE--EEEESSC----CCSBCEEETTTEEEEECTTS
T ss_pred ccccccccccccccccccccCcccCcccCCCcceEEEEeCCCCceec--ccCCCCC----CccceeEecCCEEEEECCCC
Confidence 223333333322100 0000000 00111122466788899999
Q ss_pred cEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-EEEEE
Q psy6127 418 IIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASG 458 (515)
Q Consensus 418 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sg 458 (515)
.++-+|.++|+.+-++......... -+.|..+|+ |++..
T Consensus 495 ~l~A~Da~TGe~LW~~~~~~~~~a~--P~tY~~dGkQYvav~ 534 (596)
T d1w6sa_ 495 YLKARDSDTGDLLWKFKIPSGAIGY--PMTYTHKGTQYVAIY 534 (596)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSC--CEEEEETTEEEEEEE
T ss_pred eEEEEECCCCcEeeEEECCCCcccC--CeEEEECCEEEEEEE
Confidence 9999999999999888765444332 356667885 55543
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.07 E-value=0.029 Score=55.30 Aligned_cols=194 Identities=13% Similarity=0.097 Sum_probs=106.4
Q ss_pred CCCEEEEEeCCCeEEEEECC-CCeeeeEecCCCCc-----------eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCee
Q psy6127 232 DGSLLISCSDDDQIIIYDCE-QGTSKNTINSKKYG-----------VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKY 299 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~-~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~ 299 (515)
+|...++.+.++.|...|.. +|+.+.++...... -..+++. +..+++.+ .|+.+.-.|.++|+.
T Consensus 62 ~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~~--~~g~l~alda~tG~~ 137 (571)
T d2ad6a1 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQ--ANGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEEC--TTSEEEEEETTTCCE
T ss_pred CCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceee--CCeEEEEe--CCCcEEeeehhhhhh
Confidence 45443333346788888874 68888776422110 0123333 33455544 699999999999998
Q ss_pred eEEecCCC----CCeEEEEEcCCCCEEEEEe------CCCcEEEEEcCCCCeEEEEecCCC-------------------
Q psy6127 300 VRYFPGHV----RKVSSLNLSPVDDSFISGS------YDKTVRVWDLRQPNNVGMIQLSGN------------------- 350 (515)
Q Consensus 300 ~~~~~~h~----~~v~~l~~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~------------------- 350 (515)
.....-.. ..++.--.-. +..++.+. .+|.|+-+|+++|+.+..+.....
T Consensus 138 ~w~~~~~~~~~~~~~t~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~ 216 (571)
T d2ad6a1 138 NWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred hccccccccccccceeecCeEe-CCeEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCc
Confidence 76553211 1111111111 23444554 367899999999999887643210
Q ss_pred -------------------e-eEEEECCCCCEEEEEECC----------------CcEEEEEeecCCCCCceeeecCC--
Q psy6127 351 -------------------K-PIAAYDPEGLAFAIGVNS----------------DSIKLYDVRSYDKGPFASFKCPG-- 392 (515)
Q Consensus 351 -------------------~-~~~~~s~~~~~l~~g~~d----------------g~i~i~d~~~~~~~~~~~~~~~~-- 392 (515)
+ ...+++++...+..+..+ ..+.-.|.++++..- ..+...
T Consensus 217 ~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W--~~q~~~~D 294 (571)
T d2ad6a1 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKW--GYQKTPHD 294 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEE--EEESSTTC
T ss_pred ccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhhee--cccccCcc
Confidence 1 124666777666665442 345555666544110 111000
Q ss_pred ----CCCcCeEEEEEcCCCC---EEEEEECCCcEEEEECCCCceeEE
Q psy6127 393 ----ERGCEWTGLKFSPDGK---LILVSTNGSIIRLFDAFNGNCVQS 432 (515)
Q Consensus 393 ----~~~~~i~~l~~sp~~~---~l~~~s~dg~i~iwd~~~~~~~~~ 432 (515)
.............+++ .++.++.+|.++++|..+|+.+..
T Consensus 295 ~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~ 341 (571)
T d2ad6a1 295 EWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVA 341 (571)
T ss_dssp SSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeee
Confidence 0011111222223443 456788999999999999987643
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=97.02 E-value=0.1 Score=47.40 Aligned_cols=202 Identities=14% Similarity=0.203 Sum_probs=120.3
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEec----CCC--eEEEEEeeCC--CeEEEEECCC-Ceee
Q psy6127 230 SSDGSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFTH----SKT--TAIHASTKVD--ATLRYLSLHD-NKYV 300 (515)
Q Consensus 230 spd~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~----~~~--~l~~~s~~~d--~~v~vwd~~~-~~~~ 300 (515)
.|+..+++....++-+.+||++ |+.+..+.. +.++.+..-. .+. .+++++...+ .+|.+|.+.. ...+
T Consensus 37 ~p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~~--Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l 113 (353)
T d1h6la_ 37 NPQNSKLITTNKKSGLAVYSLE-GKMLHSYHT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (353)
T ss_dssp CGGGCEEEEEETTSCCEEEETT-CCEEEECCS--SCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred CcCccEEEEEcCcCCEEEEcCC-CcEEEeccc--CCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence 3455667766777679999986 888877653 3455544331 222 3455553222 3677887752 2233
Q ss_pred EEecCC-------CCCeEEEEE--cCC-CC-EEEEEeCCCcEEEEEcC---CC----CeEEEEecCCCeeEEEECCCCCE
Q psy6127 301 RYFPGH-------VRKVSSLNL--SPV-DD-SFISGSYDKTVRVWDLR---QP----NNVGMIQLSGNKPIAAYDPEGLA 362 (515)
Q Consensus 301 ~~~~~h-------~~~v~~l~~--~~~-~~-~l~s~s~dg~i~iwd~~---~~----~~~~~~~~~~~~~~~~~s~~~~~ 362 (515)
..+... ...+..+|+ +|. +. +++....+|.+..|.+. .+ +.++.+.....+..+.+++....
T Consensus 114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~ 193 (353)
T d1h6la_ 114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGS 193 (353)
T ss_dssp EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCc
Confidence 333221 124666776 554 44 56667788999888763 23 34556677777899999999999
Q ss_pred EEEEECCCcEEEEEeecCCCCCceee-ecC-CCCCcCeEEEEEcC--CCC-EEEEEE-CCCcEEEEECCCC-ceeEEee
Q psy6127 363 FAIGVNSDSIKLYDVRSYDKGPFASF-KCP-GERGCEWTGLKFSP--DGK-LILVST-NGSIIRLFDAFNG-NCVQSLS 434 (515)
Q Consensus 363 l~~g~~dg~i~i~d~~~~~~~~~~~~-~~~-~~~~~~i~~l~~sp--~~~-~l~~~s-~dg~i~iwd~~~~-~~~~~~~ 434 (515)
|..+-++.-+..++............ ... ......+..++.-. ++. ||++++ .+++..+||..+. +.+..+.
T Consensus 194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F~ 272 (353)
T d1h6la_ 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADFQ 272 (353)
T ss_dssp EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceEE
Confidence 99998877666665543221111111 111 23355677777653 333 665555 5788999998763 5555544
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.96 E-value=0.089 Score=51.52 Aligned_cols=194 Identities=15% Similarity=0.128 Sum_probs=107.1
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeEecCCCCc-----------eeEEEEecCCCeEEEEEeeCCCeEEEEECCCCeeeEE
Q psy6127 234 SLLISCSDDDQIIIYDCEQGTSKNTINSKKYG-----------VDLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYVRY 302 (515)
Q Consensus 234 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~~~ 302 (515)
..|+.++.++.|.-.|.++|+.+.++...... -..++.. +..+++.+ .++.+.-.|..+|+.+..
T Consensus 67 g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~--~~g~l~Alda~tG~~~w~ 142 (560)
T d1kv9a2 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGT--LDGRLIALDAKTGKAIWS 142 (560)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEEC--TTSEEEEEETTTCCEEEE
T ss_pred CEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCccee--CCeEEEEe--CCCEEEEEECCCCcEEec
Confidence 35667778899999999999999876422110 0111111 33455544 699999999999998876
Q ss_pred ecCCCC-CeEEEEEcC--CCCEEEEEeC------CCcEEEEEcCCCCeEEEEecCC------------------------
Q psy6127 303 FPGHVR-KVSSLNLSP--VDDSFISGSY------DKTVRVWDLRQPNNVGMIQLSG------------------------ 349 (515)
Q Consensus 303 ~~~h~~-~v~~l~~~~--~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~------------------------ 349 (515)
...+.. .-..+.-.| .+..++.+.. .|.|.-+|.++|+.+-.+....
T Consensus 143 ~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (560)
T d1kv9a2 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (560)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred cCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCcccccccccccccccccc
Confidence 643211 000000011 0233444432 3679999999999998874311
Q ss_pred -------Ce-eEEEECCCCCEEEEEECC-------------------CcEEEEEeecCCCCCceeeecCC------CCCc
Q psy6127 350 -------NK-PIAAYDPEGLAFAIGVNS-------------------DSIKLYDVRSYDKGPFASFKCPG------ERGC 396 (515)
Q Consensus 350 -------~~-~~~~~s~~~~~l~~g~~d-------------------g~i~i~d~~~~~~~~~~~~~~~~------~~~~ 396 (515)
.+ ...++++...++..+..+ ..|.-.|+++++..- ..+... ....
T Consensus 223 ~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W--~~Q~~~~D~wd~d~~~ 300 (560)
T d1kv9a2 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW--HYQVTPGDSWDFTATQ 300 (560)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE--EEESSTTCCSCCCCCS
T ss_pred ccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeE--EEeccccccccccccc
Confidence 01 125667777766654321 234444555543110 111100 0111
Q ss_pred CeEEEEEcCCC---CEEEEEECCCcEEEEECCCCceeEEe
Q psy6127 397 EWTGLKFSPDG---KLILVSTNGSIIRLFDAFNGNCVQSL 433 (515)
Q Consensus 397 ~i~~l~~sp~~---~~l~~~s~dg~i~iwd~~~~~~~~~~ 433 (515)
...-+....++ ..++.++.+|.++++|..+|+.+...
T Consensus 301 ~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~ 340 (560)
T d1kv9a2 301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (560)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred eeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccc
Confidence 11112222234 35667888999999999999887544
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=96.94 E-value=0.076 Score=52.21 Aligned_cols=109 Identities=14% Similarity=0.030 Sum_probs=66.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeEecCCCC----------ce-eEEEEecCCCeEEEEEeeCCCeEEEEECCCCeee
Q psy6127 232 DGSLLISCSDDDQIIIYDCEQGTSKNTINSKKY----------GV-DLIKFTHSKTTAIHASTKVDATLRYLSLHDNKYV 300 (515)
Q Consensus 232 d~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~----------~v-~~~~~~~~~~~l~~~s~~~d~~v~vwd~~~~~~~ 300 (515)
+| .|+.++.++.|.-+|.++|+.+..+..... .+ ..+.+. +..+++.+ .|+.+.-.|.++|+.+
T Consensus 77 ~g-~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t--~~g~l~alda~tG~~~ 151 (573)
T d1kb0a2 77 DG-IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGA--WDGRLIALDAATGKEV 151 (573)
T ss_dssp TT-EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEEC--TTSEEEEEETTTCCEE
T ss_pred CC-EEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEe--cccceeeeccccccce
Confidence 44 566778889999999999999887643210 11 112222 23444443 6899999999999987
Q ss_pred EEecCC--C-CCeE--EEEEcCCCCEEEEEeC------CCcEEEEEcCCCCeEEEEe
Q psy6127 301 RYFPGH--V-RKVS--SLNLSPVDDSFISGSY------DKTVRVWDLRQPNNVGMIQ 346 (515)
Q Consensus 301 ~~~~~h--~-~~v~--~l~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~ 346 (515)
...... . ..+. ..-.-. +..++.++. .|.|.-+|.++|+.+-.+.
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 207 (573)
T d1kb0a2 152 WHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (573)
T ss_dssp EEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ecccCccCCcceEEeecceEEE-eccEEEeeccccccccceEEEEecCCccceeeee
Confidence 654321 1 1111 000001 334555432 4679999999999988763
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.44 E-value=0.24 Score=44.82 Aligned_cols=186 Identities=11% Similarity=0.142 Sum_probs=103.8
Q ss_pred eEEEEEcCCCCEEEEEeC------------CCcEEEEEcCCCCeEE-EEecC-C-------CeeEEE--ECCCCCE-EEE
Q psy6127 310 VSSLNLSPVDDSFISGSY------------DKTVRVWDLRQPNNVG-MIQLS-G-------NKPIAA--YDPEGLA-FAI 365 (515)
Q Consensus 310 v~~l~~~~~~~~l~s~s~------------dg~i~iwd~~~~~~~~-~~~~~-~-------~~~~~~--~s~~~~~-l~~ 365 (515)
.-++...|+|..+++++. .|.|.++|+.+.+... .+... . ....+. -.++|.. |++
T Consensus 37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v 116 (340)
T d1v04a_ 37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 116 (340)
T ss_dssp CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence 345677777766655432 4889999988764322 22111 0 122232 3456653 433
Q ss_pred EE---CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC---------------CCcEEEEECCCC
Q psy6127 366 GV---NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN---------------GSIIRLFDAFNG 427 (515)
Q Consensus 366 g~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~---------------dg~i~iwd~~~~ 427 (515)
.. ...+|.+|++..........-..........+.+++..++.++++-.. -+.-.+|....+
T Consensus 117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~ 196 (340)
T d1v04a_ 117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 196 (340)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS
T ss_pred EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC
Confidence 32 456789999876443221111123344456788999999987777321 123344444444
Q ss_pred ceeEEeeccccCCCCCEEEEEecCCCEEEEEe-CCCcEEEEECCCCe---EEEEEcCCCCCCeEEEEECC-CCCEEEEe
Q psy6127 428 NCVQSLSGVLNNNASPLEATFTPDSQFVASGS-TDGQVHIWNAERGY---KVCVLDGDHPSAVQSLQFNP-KYHMLASA 501 (515)
Q Consensus 428 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs-~dg~I~iwd~~~~~---~~~~~~~~h~~~V~~l~~sp-~~~~las~ 501 (515)
+......+. ...+.++++||+++|+.+. ..++|++|++.... ...... -.+..-.+.+.+ +|.+.+++
T Consensus 197 ~~~~~~~~l----~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~--l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 197 DVRVVAEGF----DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp CEEEEEEEE----SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSEEEEEEECTTTCCEEEEE
T ss_pred ceEEEcCCC----CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEec--CCCCCCccEEecCCCEEEEEE
Confidence 433323322 2268999999998776664 56789999886443 222222 234566788876 45554443
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.11 E-value=0.19 Score=49.30 Aligned_cols=52 Identities=17% Similarity=0.299 Sum_probs=39.1
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC-EEEEE
Q psy6127 405 PDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ-FVASG 458 (515)
Q Consensus 405 p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~sg 458 (515)
..+..+++|+.||.++-+|.++|+.+-++......... -+.|..+|+ |+++.
T Consensus 495 tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~--P~ty~~~G~qYv~i~ 547 (582)
T d1flga_ 495 TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSP--PITWEQDGEQYLGVT 547 (582)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC--CEEEEETTEEEEEEE
T ss_pred EcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCcccc--CEEEEECCEEEEEEE
Confidence 35678888999999999999999999888765444332 367778885 55543
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.80 E-value=0.67 Score=42.19 Aligned_cols=176 Identities=12% Similarity=0.090 Sum_probs=106.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEE
Q psy6127 222 DKINSLDYSSDGSLLISCSDDDQIIIYDCEQ-----------GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLR 290 (515)
Q Consensus 222 ~~I~~l~~spd~~~lasgs~dg~i~iwd~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~ 290 (515)
....-++.++...+++.|+.++ ++|-.++. ........ -..|..++|+.+ .+++.+ ++.+.
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d--~l~v~~---~~~l~ 108 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGD--QVLVST---RNALY 108 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETT--EEEEEE---SSEEE
T ss_pred cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCC--EEEEEe---CCCEE
Confidence 3456788888777888888775 56665321 11111111 135888899754 455543 66788
Q ss_pred EEECCCCeeeEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEE------EecCCCeeEEEECCCCCEEE
Q psy6127 291 YLSLHDNKYVRYFPGHVRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGM------IQLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 291 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~------~~~~~~~~~~~~s~~~~~l~ 364 (515)
.++...-........-..++..+.++|. .++....++.+.++++..++.... +...+...+++|++.|..++
T Consensus 109 ~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v 186 (381)
T d1xipa_ 109 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSF 186 (381)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred EEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEE
Confidence 8887654433333334566888888874 566677889999999998865432 23445677888888888888
Q ss_pred EEECCCcEEEE-EeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEE
Q psy6127 365 IGVNSDSIKLY-DVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVS 413 (515)
Q Consensus 365 ~g~~dg~i~i~-d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~ 413 (515)
++..++ ..+. ++... ..+..+......+.+|.|-.+..++++-
T Consensus 187 ~~~g~~-~q~k~~i~~~-----~~~~~p~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 187 AWRNGE-MEKQFEFSLP-----SELEELPVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp EEETTE-EEEEEEECCC-----HHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EeCCCc-eeeccCCCCc-----cccCCCcCCCcceeEEEEecCceEEEEE
Confidence 774322 2211 11110 0112222334467799998777666654
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=95.74 E-value=0.67 Score=41.74 Aligned_cols=189 Identities=15% Similarity=0.204 Sum_probs=108.3
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCCeeEEE------ECCCCCEEEEEECC----CcEEEEEeecCCCCCce
Q psy6127 317 PVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGNKPIAA------YDPEGLAFAIGVNS----DSIKLYDVRSYDKGPFA 386 (515)
Q Consensus 317 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------~s~~~~~l~~g~~d----g~i~i~d~~~~~~~~~~ 386 (515)
|+..+++....++-|.+||+. |+.+..+.... ++.+. +.....-+++++.. .+|.+|.+..... ...
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~~Gr-~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~-~l~ 114 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYHTGK-LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQ 114 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETT-CCEEEECCSSC-EEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTT-EEE
T ss_pred cCccEEEEEcCcCCEEEEcCC-CcEEEecccCC-cCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccc-ccc
Confidence 345577777777789999985 77776664332 44333 22233345555532 3678888764221 111
Q ss_pred eeecCC----CCCcCeEEEEE--cCC-CC-EEEEEECCCcEEEEECC---CCc----eeEEeeccccCCCCCEEEEEecC
Q psy6127 387 SFKCPG----ERGCEWTGLKF--SPD-GK-LILVSTNGSIIRLFDAF---NGN----CVQSLSGVLNNNASPLEATFTPD 451 (515)
Q Consensus 387 ~~~~~~----~~~~~i~~l~~--sp~-~~-~l~~~s~dg~i~iwd~~---~~~----~~~~~~~~~~~~~~i~~~~~sp~ 451 (515)
.+.... .....+.++|+ +|. |. ++++...+|.+..|.+. .+. .++.+. ....+..|.+.+.
T Consensus 115 ~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~----~~~q~EGCVvDde 190 (353)
T d1h6la_ 115 SITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK----MNSQTEGMAADDE 190 (353)
T ss_dssp ECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE----CSSCEEEEEEETT
T ss_pred cccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC----CCCccceEEEeCC
Confidence 111100 11123556776 664 44 55666778988888663 332 233333 2334789999999
Q ss_pred CCEEEEEeCCCcEEEEECC-----CCeEEEEEcC-CCCCCeEEEEECC--CCC-EEEEee-C--CEEEEcCCC
Q psy6127 452 SQFVASGSTDGQVHIWNAE-----RGYKVCVLDG-DHPSAVQSLQFNP--KYH-MLASAC-S--NMAFWIPTL 512 (515)
Q Consensus 452 g~~l~sgs~dg~I~iwd~~-----~~~~~~~~~~-~h~~~V~~l~~sp--~~~-~las~~-~--dv~iW~~~~ 512 (515)
.+.|+.+-++.-|+.++.. .+..+....+ ...+.+..|+.-. ++. +|+.++ + ...||+...
T Consensus 191 ~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~ 263 (353)
T d1h6la_ 191 YGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQG 263 (353)
T ss_dssp TTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred CCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCC
Confidence 9999999887767666653 2344444433 2456788887643 322 444443 3 388887654
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.62 E-value=0.34 Score=42.04 Aligned_cols=217 Identities=10% Similarity=0.073 Sum_probs=97.2
Q ss_pred CeEEEEECCCCeeee--EecCCCCceeEEEEecCCCeEEEEEee--------CCCeEEEEECCCCeeeEEe--cCCCCCe
Q psy6127 243 DQIIIYDCEQGTSKN--TINSKKYGVDLIKFTHSKTTAIHASTK--------VDATLRYLSLHDNKYVRYF--PGHVRKV 310 (515)
Q Consensus 243 g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~~--------~d~~v~vwd~~~~~~~~~~--~~h~~~v 310 (515)
..+.+||.++++-.. .+......-..+.. +..+++.+|. .-..+.+||..+.+....- ......-
T Consensus 19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~ 95 (288)
T d1zgka1 19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV---GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI 95 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC
T ss_pred ceEEEEECCCCeEEECCCCCCccceeEEEEE---CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecce
Confidence 468899998875432 23222222222222 3455554431 1246778888776544321 1111111
Q ss_pred EEEEEcCCCCEEEEEeCCCc-----EEEEEcCCCCeEEEEecCCC--eeEEEECCCCCEEEEEECC-----CcEEEEEee
Q psy6127 311 SSLNLSPVDDSFISGSYDKT-----VRVWDLRQPNNVGMIQLSGN--KPIAAYDPEGLAFAIGVNS-----DSIKLYDVR 378 (515)
Q Consensus 311 ~~l~~~~~~~~l~s~s~dg~-----i~iwd~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~g~~d-----g~i~i~d~~ 378 (515)
.++.+ +++.++.++.++. ...+|..+............ -...... ++..++.|+.+ ..+..||..
T Consensus 96 ~~~~~--~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~~ 172 (288)
T d1zgka1 96 GVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPE 172 (288)
T ss_dssp EEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred ecccc--ceeeEEecceecccccceeeeeccccCccccccccccccccceeeee-eecceEecCcccccccceEEEeecc
Confidence 22222 4565555554333 44566666543322211111 1122222 34455555443 346777765
Q ss_pred cCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCceeEEeeccccCCCCCEEEEEecCCC
Q psy6127 379 SYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDAFNGNCVQSLSGVLNNNASPLEATFTPDSQ 453 (515)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 453 (515)
..... ......... .-.+.+.. +++.++.++.+ .....+|..+.+....-. ...... -.+++. .+++
T Consensus 173 ~~~~~---~~~~~~~~~-~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~-~~~~~~-~~~~ 244 (288)
T d1zgka1 173 RNEWR---MITAMNTIR-SGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP-MKHRRS-ALGITV-HQGR 244 (288)
T ss_dssp TTEEE---ECCCCSSCC-BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC-CSSCCB-SCEEEE-ETTE
T ss_pred ccccc---ccccccccc-ccccccce-eeeEEEecCccccccccceeeeeecceeeecccC-ccCccc-ceEEEE-ECCE
Confidence 43211 111111111 11122222 34455555433 356778877765433211 111111 123333 3678
Q ss_pred EEEEEeCCC-----cEEEEECCCCe
Q psy6127 454 FVASGSTDG-----QVHIWNAERGY 473 (515)
Q Consensus 454 ~l~sgs~dg-----~I~iwd~~~~~ 473 (515)
+++.|+.++ .+.+||+.+++
T Consensus 245 l~v~GG~~~~~~~~~v~~yd~~~~~ 269 (288)
T d1zgka1 245 IYVLGGYDGHTFLDSVECYDPDTDT 269 (288)
T ss_dssp EEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEecCCCCeecceEEEEECCCCE
Confidence 888877554 37899998764
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.24 E-value=1.3 Score=40.15 Aligned_cols=180 Identities=12% Similarity=0.050 Sum_probs=99.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-----------CCCeEEEEecCCCeeEEEECCCCCEEEEEECCCcEEEEE
Q psy6127 308 RKVSSLNLSPVDDSFISGSYDKTVRVWDLR-----------QPNNVGMIQLSGNKPIAAYDPEGLAFAIGVNSDSIKLYD 376 (515)
Q Consensus 308 ~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~-----------~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i~d 376 (515)
...+-++.++...+++.|+.++ +++..+. ........... .+..++|+-+ .+++. .++.+..++
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~ip-~v~~vafs~d--~l~v~-~~~~l~~~~ 111 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIP-DVIFVCFHGD--QVLVS-TRNALYSLD 111 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECT-TEEEEEEETT--EEEEE-ESSEEEEEE
T ss_pred cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCCC-CeEEEEeeCC--EEEEE-eCCCEEEEE
Confidence 4566788888778888888775 5666532 11222222333 3777888644 45554 456677777
Q ss_pred eecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECCCcEEEEECCCCceeEEeeccc--cCCCCCEEEEEecCCCE
Q psy6127 377 VRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNGSIIRLFDAFNGNCVQSLSGVL--NNNASPLEATFTPDSQF 454 (515)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~~i~~~~~sp~g~~ 454 (515)
...... .........++..+.++|. .++....++.+.++++.+++......+.. .....+.+++|++.|+.
T Consensus 112 ~~~l~~-----~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq 184 (381)
T d1xipa_ 112 LEELSE-----FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQ 184 (381)
T ss_dssp SSSTTC-----EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEE
T ss_pred eecccc-----ccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEE
Confidence 765331 1111122345677888775 56677788999999999886543322110 11223566667666666
Q ss_pred EEEEeCCCcEEEE-ECCCCeEEEEEcCCCCCCeEEEEECCCCCEEEEe
Q psy6127 455 VASGSTDGQVHIW-NAERGYKVCVLDGDHPSAVQSLQFNPKYHMLASA 501 (515)
Q Consensus 455 l~sgs~dg~I~iw-d~~~~~~~~~~~~~h~~~V~~l~~sp~~~~las~ 501 (515)
++++..++ ..+- ++.....+... ......|.++.|-.+..+++.-
T Consensus 185 ~v~~~g~~-~q~k~~i~~~~~~~~p-~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 185 SFAWRNGE-MEKQFEFSLPSELEEL-PVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp EEEEETTE-EEEEEEECCCHHHHTS-CTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEeCCCc-eeeccCCCCccccCCC-cCCCcceeEEEEecCceEEEEE
Confidence 66553221 1110 11110000000 0134568899998887777654
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=93.60 E-value=2.9 Score=38.93 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=38.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecC---------CCeeEEEECCC
Q psy6127 307 VRKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLS---------GNKPIAAYDPE 359 (515)
Q Consensus 307 ~~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---------~~~~~~~~s~~ 359 (515)
-...++|+|.|+++.+++--..|.|++++..+++........ .....++++|+
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 346789999999998877655799999998887765443221 23457999985
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.22 E-value=0.8 Score=39.47 Aligned_cols=215 Identities=10% Similarity=0.042 Sum_probs=95.4
Q ss_pred CeEEEEECCCCeeeEE--ecCCCCCeEEEEEcCCCCEEEEEeC---------CCcEEEEEcCCCCeEEEEecCCC-eeEE
Q psy6127 287 ATLRYLSLHDNKYVRY--FPGHVRKVSSLNLSPVDDSFISGSY---------DKTVRVWDLRQPNNVGMIQLSGN-KPIA 354 (515)
Q Consensus 287 ~~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~-~~~~ 354 (515)
..+.+||+.+++-... +......-..+.. ++..++.|+. -..+.+||..+.+....-....+ ....
T Consensus 19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~ 96 (288)
T d1zgka1 19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 96 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceeccee
Confidence 3577999988764332 2222222222222 3566666553 13567888877655432221111 1111
Q ss_pred EECCCCCEEEEEECCCc-----EEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEECC-----CcEEEEEC
Q psy6127 355 AYDPEGLAFAIGVNSDS-----IKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTNG-----SIIRLFDA 424 (515)
Q Consensus 355 ~~s~~~~~l~~g~~dg~-----i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~d-----g~i~iwd~ 424 (515)
+...+++.++.++.++. ...+|..+... ............. +.... ++..++.|+.+ ..+..||.
T Consensus 97 ~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~~~-~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~ 171 (288)
T d1zgka1 97 VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW---HLVAPMLTRRIGV-GVAVL-NRLLYAVGGFDGTNRLNSAECYYP 171 (288)
T ss_dssp EEEETTEEEEECCEETTEECCCEEEEETTTTEE---EECCCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEET
T ss_pred ccccceeeEEecceecccccceeeeeccccCcc---ccccccccccccc-eeeee-eecceEecCcccccccceEEEeec
Confidence 12225566665544333 33344443221 1111111111111 22222 33455555432 35788888
Q ss_pred CCCceeEEeeccccCCCCCEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeEEEEEcCCCCCCeEEEEECCCCCEEE
Q psy6127 425 FNGNCVQSLSGVLNNNASPLEATFTPDSQFVASGSTD-----GQVHIWNAERGYKVCVLDGDHPSAVQSLQFNPKYHMLA 499 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~~~~la 499 (515)
.+.+....-.. ... ....+.+. .++++++.|+.+ .....+|..+.+....-.......-.+++. .++++++
T Consensus 172 ~~~~~~~~~~~-~~~-~~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v 247 (288)
T d1zgka1 172 ERNEWRMITAM-NTI-RSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYV 247 (288)
T ss_dssp TTTEEEECCCC-SSC-CBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEE
T ss_pred ccccccccccc-ccc-cccccccc-eeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE-ECCEEEE
Confidence 76654322111 111 11122333 345666666544 357788887776554322211111112222 2567777
Q ss_pred EeeC-------CEEEEcCCC
Q psy6127 500 SACS-------NMAFWIPTL 512 (515)
Q Consensus 500 s~~~-------dv~iW~~~~ 512 (515)
.|+. ++.+||+..
T Consensus 248 ~GG~~~~~~~~~v~~yd~~~ 267 (288)
T d1zgka1 248 LGGYDGHTFLDSVECYDPDT 267 (288)
T ss_dssp ECCBCSSCBCCEEEEEETTT
T ss_pred EecCCCCeecceEEEEECCC
Confidence 7652 266777654
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=93.10 E-value=3.4 Score=38.36 Aligned_cols=54 Identities=17% Similarity=0.273 Sum_probs=39.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeeE--ec------CCCCceeEEEEecC
Q psy6127 221 TDKINSLDYSSDGSLLISCSDDDQIIIYDCEQGTSKNT--IN------SKKYGVDLIKFTHS 274 (515)
Q Consensus 221 ~~~I~~l~~spd~~~lasgs~dg~i~iwd~~~~~~~~~--~~------~~~~~v~~~~~~~~ 274 (515)
-...++|+|.|||++|++--..|.|++++..+++.... +. ..+.....++|+|+
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 34678999999999888765579999999877654322 21 22356788999985
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=91.46 E-value=4.4 Score=35.93 Aligned_cols=186 Identities=10% Similarity=0.083 Sum_probs=102.9
Q ss_pred EEEEEcCCCCEEEEEeC------------CCeEEEEECCCCeeee-Ee--cCC-----CCceeEEEE--ecCCCeEEEEE
Q psy6127 225 NSLDYSSDGSLLISCSD------------DDQIIIYDCEQGTSKN-TI--NSK-----KYGVDLIKF--THSKTTAIHAS 282 (515)
Q Consensus 225 ~~l~~spd~~~lasgs~------------dg~i~iwd~~~~~~~~-~~--~~~-----~~~v~~~~~--~~~~~~l~~~s 282 (515)
-.+...|||..+++++. .|.|.++|+++.+... .+ .+. ......+.. .+++...+.+.
T Consensus 38 EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vv 117 (340)
T d1v04a_ 38 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 117 (340)
T ss_dssp CEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEE
Confidence 35677788876665542 3889999987653321 11 111 122344443 34555433332
Q ss_pred -e-eCCCeEEEEECCCCe--e--eEEecC-CCCCeEEEEEcCCCCEEEEEeC---------------CCcEEEEEcCCCC
Q psy6127 283 -T-KVDATLRYLSLHDNK--Y--VRYFPG-HVRKVSSLNLSPVDDSFISGSY---------------DKTVRVWDLRQPN 340 (515)
Q Consensus 283 -~-~~d~~v~vwd~~~~~--~--~~~~~~-h~~~v~~l~~~~~~~~l~s~s~---------------dg~i~iwd~~~~~ 340 (515)
- ....+|.+|++.... . +.++.. .....+++.+..++.+++|-.. -++..+|....++
T Consensus 118 nH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~ 197 (340)
T d1v04a_ 118 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND 197 (340)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSC
T ss_pred eccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCc
Confidence 1 235678888875432 1 122221 2345789999998988777311 1234555555555
Q ss_pred eEEEEecCCCeeEEEECCCCCEEEEEE-CCCcEEEEEeecCCCCCceeeecCCCCCcCeEEEEEcCC-CCEEEEE
Q psy6127 341 NVGMIQLSGNKPIAAYDPEGLAFAIGV-NSDSIKLYDVRSYDKGPFASFKCPGERGCEWTGLKFSPD-GKLILVS 413 (515)
Q Consensus 341 ~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~-~~~l~~~ 413 (515)
.......-...+.++++|++++++++. ..+.|+.|++...... ...... .-....-.+.+.++ |.+.+.+
T Consensus 198 ~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l--~~~~~~-~l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 198 VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL--TPLRVL-SFDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred eEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCccc--ceEEEe-cCCCCCCccEEecCCCEEEEEE
Confidence 443333334588899999998876664 5778999998753321 111111 12334457888764 4444443
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=82.71 E-value=11 Score=30.62 Aligned_cols=225 Identities=12% Similarity=0.120 Sum_probs=115.4
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeEecCCCCceeEEEEe-cCCCeEEEEE----eeCCCeEEEEECCCCeeeEEecCCC
Q psy6127 233 GSLLISCSDDDQIIIYDCEQGTSKNTINSKKYGVDLIKFT-HSKTTAIHAS----TKVDATLRYLSLHDNKYVRYFPGHV 307 (515)
Q Consensus 233 ~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~s----~~~d~~v~vwd~~~~~~~~~~~~h~ 307 (515)
.+.++++...|.+.++-+..++.++.-+ .+|.....- +.-..+.++- |..-..+.+-++........+....
T Consensus 26 d~ll~~~~seG~vni~~l~g~~~vkLtk---ePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~spk 102 (313)
T d2hu7a1 26 DKLLVVGFSEGSVNAYLYDGGETVKLNR---EPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK 102 (313)
T ss_dssp TEEEEEEEETTEEEEEEESSSSCEECCS---SCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTSC
T ss_pred CcEEEEEeccceEEEEEEeCCEEEEEec---ccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecCCc
Confidence 3477777778999999887665544322 233222111 1111222221 0112234444443211122222222
Q ss_pred -CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCeEEEEecCCC--eeEE---------EECCCCCEEEEEEC-CCcEEE
Q psy6127 308 -RKVSSLNLSPVDDSFISGSYDKTVRVWDLRQPNNVGMIQLSGN--KPIA---------AYDPEGLAFAIGVN-SDSIKL 374 (515)
Q Consensus 308 -~~v~~l~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~---------~~s~~~~~l~~g~~-dg~i~i 374 (515)
-.|.+++.. +.+..++|+......+|-++.|+.......+.- ++.+ .+.+...-+.++.- .|.+++
T Consensus 103 ~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri 181 (313)
T d2hu7a1 103 PMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV 181 (313)
T ss_dssp SBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEE
T ss_pred eEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEE
Confidence 345555554 244677888888889999888876554433321 1111 11222222333332 444444
Q ss_pred EEeecCCCCCceeeecCCCCCcCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCceeEE-eeccc---cCCCCCEEEE
Q psy6127 375 YDVRSYDKGPFASFKCPGERGCEWTGLKFSPDGKLILVSTN---GSIIRLFDAFNGNCVQS-LSGVL---NNNASPLEAT 447 (515)
Q Consensus 375 ~d~~~~~~~~~~~~~~~~~~~~~i~~l~~sp~~~~l~~~s~---dg~i~iwd~~~~~~~~~-~~~~~---~~~~~i~~~~ 447 (515)
++ ...+.++.....|..+. +++-+ .....-+|+++++..+. +.... -....|+-+-
T Consensus 182 ~t----------------pkeGS~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~ 244 (313)
T d2hu7a1 182 FD----------------SGEGSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLG 244 (313)
T ss_dssp EC----------------CSSEEEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEE
T ss_pred ec----------------CCCCcccceeEccCcee-eeccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeee
Confidence 44 33455666677777665 44332 12223558877664332 11110 0112245566
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCeEEEEEcC
Q psy6127 448 FTPDSQFVASGSTDGQVHIWNAERGYKVCVLDG 480 (515)
Q Consensus 448 ~sp~g~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 480 (515)
+.|++++++.+-.||.-+++. +|+.+...++
T Consensus 245 Y~Pdd~L~iiakrdG~s~lF~--nGk~in~p~G 275 (313)
T d2hu7a1 245 YLPDGRLAVVARREGRSAVFI--DGERVEAPQG 275 (313)
T ss_dssp ECTTSCEEEEEEETTEEEEEE--TTEEECCCSS
T ss_pred eCCCCcEEEEEecCCchheee--cceEecCCCC
Confidence 899999989999999999986 5777765544
|
| >d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: GyrA/ParC C-terminal domain-like family: GyrA/ParC C-terminal domain-like domain: Topoisomerase IV subunit A, ParC, C-terminal domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=81.35 E-value=16 Score=31.74 Aligned_cols=236 Identities=8% Similarity=0.029 Sum_probs=130.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCC----CeeeeEecCCCCceeEEEEecCCCeEEEEEeeCCCeEEEEE---CCC------C
Q psy6127 231 SDGSLLISCSDDDQIIIYDCEQ----GTSKNTINSKKYGVDLIKFTHSKTTAIHASTKVDATLRYLS---LHD------N 297 (515)
Q Consensus 231 pd~~~lasgs~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~~~d~~v~vwd---~~~------~ 297 (515)
|+...+++-+.+|.|+--...+ +..-..++ ..+.+..+......+.+++.+ ..|.++... +.. |
T Consensus 3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k-~~D~v~~~~~~~t~d~ll~fT--~~Grvy~l~v~eiP~~~~~s~G 79 (323)
T d1wp5a_ 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFT--NKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEE--TTSEEEEEEGGGSCBCCTTSCC
T ss_pred CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCccc-CCceEEEEEEEcCCCEEEEEe--cCCEEEEEeeccCccccccccc
Confidence 5677888999999998655432 10001122 234566665566666677666 578776554 331 3
Q ss_pred eeeEEec--CCCCCeEEEE-EcC--CCCEEEEEeCCCcEEEEEcCCCC------eEEE--EecCCCeeEEEECCCCCEEE
Q psy6127 298 KYVRYFP--GHVRKVSSLN-LSP--VDDSFISGSYDKTVRVWDLRQPN------NVGM--IQLSGNKPIAAYDPEGLAFA 364 (515)
Q Consensus 298 ~~~~~~~--~h~~~v~~l~-~~~--~~~~l~s~s~dg~i~iwd~~~~~------~~~~--~~~~~~~~~~~~s~~~~~l~ 364 (515)
.++..+- .....+..+. ..+ ...+|+..+..|.++..++.... .... +.....+..+.+..+...++
T Consensus 80 ~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~ 159 (323)
T d1wp5a_ 80 QHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEE
T ss_pred ccceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEE
Confidence 3443321 1233444433 332 35689999999999999874321 1222 23334456666667777888
Q ss_pred EEECCCcEEEEEeecCCCCC--ceeeec-CCCCCcCeEE-EEEcCCCCEEEEEECCCcEEEEECCCC-------ceeEEe
Q psy6127 365 IGVNSDSIKLYDVRSYDKGP--FASFKC-PGERGCEWTG-LKFSPDGKLILVSTNGSIIRLFDAFNG-------NCVQSL 433 (515)
Q Consensus 365 ~g~~dg~i~i~d~~~~~~~~--~~~~~~-~~~~~~~i~~-l~~sp~~~~l~~~s~dg~i~iwd~~~~-------~~~~~~ 433 (515)
.++..|.+..|+...-...- ..-... .-.....+.+ ....+++..+++.+..|..+.-.+... +-+..+
T Consensus 160 l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~~~RggkGv~~~ 239 (323)
T d1wp5a_ 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVIL 239 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECS
T ss_pred EEEecceeeEeecccccccCcccccccccccccccccchhhhccccccceeeeeeeheeecccchhhccccccccccccc
Confidence 89999999999877532110 011111 1112233433 445567778888899998887655322 112222
Q ss_pred eccccCCCCCEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy6127 434 SGVLNNNASPLEATFTPDSQFVASGSTDGQVHIWNA 469 (515)
Q Consensus 434 ~~~~~~~~~i~~~~~sp~g~~l~sgs~dg~I~iwd~ 469 (515)
.........+..+....+...|+..+..|.+.-.++
T Consensus 240 k~~k~~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~ 275 (323)
T d1wp5a_ 240 RELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKV 275 (323)
T ss_dssp CCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEG
T ss_pred cccccccceeeeeEecCCCCEEEEEeCCCEEEEEEh
Confidence 211112223445555555566666677777655544
|