Diaphorina citri psyllid: psy6129


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MRGPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTGAVT
ccccEEEEEEcHHHHHHHHHcccccccccHHHHccccEEEcccccEEEEEEEEEEEcccccccccccEEEcccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHccEEEEEEccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccEEECcccEEEEEEccccccccccccHHHHHccccccEEEccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccEEEccccccc
**GPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTG***
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MRGPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTGAVT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dynein heavy chain 5, axonemal Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles.confidentQ8VHE6
Dynein heavy chain 5, axonemal Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles.confidentQ8TE73

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0003777 [MF]microtubule motor activityprobableGO:0016787, GO:0016818, GO:0003824, GO:0016817, GO:0017111, GO:0016462, GO:0003674, GO:0003774
GO:0005815 [CC]microtubule organizing centerprobableGO:0005856, GO:0005575, GO:0015630, GO:0043228, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043226, GO:0044422
GO:0000922 [CC]spindle poleprobableGO:0043234, GO:0005856, GO:0005819, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044422, GO:0044424, GO:0043228, GO:0043226, GO:0015630
GO:0007605 [BP]sensory perception of soundprobableGO:0032501, GO:0044707, GO:0050954, GO:0007600, GO:0008150, GO:0050877, GO:0044699, GO:0003008
GO:0016887 [MF]ATPase activityprobableGO:0016787, GO:0016818, GO:0003824, GO:0017111, GO:0016817, GO:0016462, GO:0003674
GO:0005858 [CC]axonemal dynein complexprobableGO:0043229, GO:0043228, GO:0030286, GO:0043227, GO:0043226, GO:0005856, GO:0005575, GO:0005875, GO:0044430, GO:0015630, GO:0042995, GO:0005930, GO:0043234, GO:0032991, GO:0043231, GO:0043232, GO:0044463, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044447, GO:0044424, GO:0044422
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0005938 [CC]cell cortexprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0071944, GO:0044424
GO:0001539 [BP]ciliary or flagellar motilityprobableGO:0040011, GO:0048870, GO:0009987, GO:0006928, GO:0051674, GO:0044763, GO:0008150, GO:0051179, GO:0044699
GO:0035085 [CC]cilium axonemeprobableGO:0005737, GO:0005575, GO:0044463, GO:0043231, GO:0032838, GO:0031514, GO:0044441, GO:0044464, GO:0043229, GO:0005623, GO:0043226, GO:0044446, GO:0044444, GO:0097014, GO:0005929, GO:0044424, GO:0042995, GO:0043227, GO:0005930, GO:0044422, GO:0005622
GO:0008152 [BP]metabolic processprobableGO:0008150
GO:0005881 [CC]cytoplasmic microtubuleprobableGO:0005737, GO:0043234, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0005856, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044430, GO:0044424, GO:0043228, GO:0005874, GO:0043226, GO:0044422
GO:0007018 [BP]microtubule-based movementprobableGO:0007017, GO:0009987, GO:0006928, GO:0008150, GO:0044763, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VKG, chain A
Confidence level:very confident
Coverage over the Query: 6-383
View the alignment between query and template
View the model in PyMOL