Psyllid ID: psy6129

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MRGPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTGAVT
ccccEEEEEEcHHHHHHHHHcccccccccHHHHccccEEEcccccEEEEEEEEEEEcccccccccccEEEccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccEEEEEEccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccEEEEcccEEEEEEccccccccccccHHHHHccccccEEEccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccEEEccccccc
ccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccEEEEEEEcEEEEEHHHccccccEEEcccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHEEEEEccccccHHHHHHHHHHHHHcccHHHHHHHcHccHHHHHHHHHHHHHHHHHHHHHccHEEEEcccEEEcccEEEEEEEcccccccccccHHHHHHHHcHHHHEcccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccEEEEccccccc
MRGPKEVQWLTRWFLDLECRmniksvndfeWLKQCRFYFkddldktwiNITDVTFTYqneylgcterlvitpltdRCYITLAQALTmsmggspcgpagtgktetVKDMGKTLAKYVVVFNcsdqmdyrgLGRIYKglaqsgswgcfdefnrielpvLSVAAQQVAVVLAAKKEkkksfvftdgdsiemcpefgifitmnpgyagrkelpenlKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGaakrvnsrdtESTIVMRVLRDMnlsklidedepLFISLVAdlfpnqalektaypALEGAIQEQCEaaglifhppWVLKLIQLYETQRVrhgimtlgptgavt
mrgpkevqwLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAkkekkksfvftdgdsieMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRslgaakrvnsrdtestivMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMtlgptgavt
MRGPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPvlsvaaqqvavvlaakkekkksFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTGAVT
******VQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMG*************TVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVL************TDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTL*******
**GPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTG***
MRGPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTGAVT
***PKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSP********TETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPT****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRGPKEVQWLTRWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTGAVT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query383 2.2.26 [Sep-21-2011]
Q8TE73 4624 Dynein heavy chain 5, axo yes N/A 0.958 0.079 0.801 0.0
Q8VHE6 4621 Dynein heavy chain 5, axo yes N/A 0.958 0.079 0.796 0.0
Q96JB1 4490 Dynein heavy chain 8, axo no N/A 0.958 0.081 0.758 1e-172
Q91XQ0 4731 Dynein heavy chain 8, axo no N/A 0.958 0.077 0.758 1e-172
Q39575 4485 Dynein gamma chain, flage N/A N/A 0.942 0.080 0.614 1e-128
Q9P2D7 4330 Dynein heavy chain 1, axo no N/A 0.932 0.082 0.508 1e-103
P39057 4466 Dynein beta chain, ciliar N/A N/A 0.932 0.079 0.519 1e-102
P23098 4466 Dynein beta chain, ciliar N/A N/A 0.950 0.081 0.508 1e-101
Q9NYC9 4486 Dynein heavy chain 9, axo no N/A 0.950 0.081 0.505 1e-101
Q9P225 4427 Dynein heavy chain 2, axo no N/A 0.926 0.080 0.516 1e-101
>sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3 Back     alignment and function desciption
 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/368 (80%), Positives = 329/368 (89%), Gaps = 1/368 (0%)

Query: 14   FLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVITPL 73
            F DL C M+IKS  DFEWLKQCRFYF +D DK  I+ITDV F YQNE+LGCT+RLVITPL
Sbjct: 1900 FDDL-CHMHIKSPMDFEWLKQCRFYFNEDSDKMMIHITDVAFIYQNEFLGCTDRLVITPL 1958

Query: 74   TDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRI 133
            TDRCYITLAQAL MSMGG+P GPAGTGKTET KDMG+ L KYVVVFNCSDQMD+RGLGRI
Sbjct: 1959 TDRCYITLAQALGMSMGGAPAGPAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRI 2018

Query: 134  YKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFG 193
            +KGLAQSGSWGCFDEFNRI+LPVLSVAAQQ++++L  KKE KKSF+FTDGD++ M PEFG
Sbjct: 2019 FKGLAQSGSWGCFDEFNRIDLPVLSVAAQQISIILTCKKEHKKSFIFTDGDNVTMNPEFG 2078

Query: 194  IFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLY 253
            +F+TMNPGYAGR+ELPENLKI FR+VAMMVPDRQIIIRVKLASCGF++N+ LARKF+TLY
Sbjct: 2079 LFLTMNPGYAGRQELPENLKINFRSVAMMVPDRQIIIRVKLASCGFIDNVVLARKFFTLY 2138

Query: 254  KLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDE 313
            KLCEEQL+KQVHYDFGLRNILSVLR+LGAAKR N  DTESTIVMRVLRDMNLSKLIDEDE
Sbjct: 2139 KLCEEQLSKQVHYDFGLRNILSVLRTLGAAKRANPMDTESTIVMRVLRDMNLSKLIDEDE 2198

Query: 314  PLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGI 373
            PLF+SL+ DLFPN  L+K  YP LE AI  Q E AGLI HPPW LK+IQL+ETQRVRHG+
Sbjct: 2199 PLFLSLIEDLFPNILLDKAGYPELEAAISRQVEEAGLINHPPWKLKVIQLFETQRVRHGM 2258

Query: 374  MTLGPTGA 381
            MTLGP+GA
Sbjct: 2259 MTLGPSGA 2266
Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles.
Homo sapiens (taxid: 9606)
>sp|Q8VHE6|DYH5_MOUSE Dynein heavy chain 5, axonemal OS=Mus musculus GN=Dnah5 PE=1 SV=2 Back     alignment and function description
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2 Back     alignment and function description
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2 Back     alignment and function description
>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA2 PE=1 SV=1 Back     alignment and function description
>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4 Back     alignment and function description
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1 Back     alignment and function description
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1 Back     alignment and function description
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3 Back     alignment and function description
>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
380029327 4613 PREDICTED: LOW QUALITY PROTEIN: dynein h 0.966 0.080 0.918 0.0
328779229 4553 PREDICTED: dynein heavy chain 5, axonema 0.966 0.081 0.918 0.0
350414937 4617 PREDICTED: dynein heavy chain 5, axonema 0.966 0.080 0.913 0.0
307167408 4612 Dynein heavy chain 5, axonemal [Camponot 0.966 0.080 0.916 0.0
340714875 4149 PREDICTED: LOW QUALITY PROTEIN: dynein h 0.966 0.089 0.910 0.0
345497345 4607 PREDICTED: LOW QUALITY PROTEIN: dynein h 0.966 0.080 0.910 0.0
242023054 4696 dynein heavy chain, cytosolic, putative 0.979 0.079 0.896 0.0
195037857 4711 GH19310 [Drosophila grimshawi] gi|193894 0.966 0.078 0.905 0.0
195108107 4680 GI23526 [Drosophila mojavensis] gi|19391 0.966 0.079 0.902 0.0
195395448 4666 GJ10278 [Drosophila virilis] gi|19414305 0.966 0.079 0.902 0.0
>gi|380029327|ref|XP_003698327.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like [Apis florea] Back     alignment and taxonomy information
 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/370 (91%), Positives = 355/370 (95%)

Query: 12   RWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVIT 71
            R   D+ CR+N++S+NDFEWLKQCRFYFK+DLDKT I ITDV FTYQNEYLGCTERLVIT
Sbjct: 1900 RDIFDILCRLNVRSINDFEWLKQCRFYFKEDLDKTSICITDVNFTYQNEYLGCTERLVIT 1959

Query: 72   PLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLG 131
            PLTDRCYITLAQAL+MSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLG
Sbjct: 1960 PLTDRCYITLAQALSMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLG 2019

Query: 132  RIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPE 191
            RIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKK F+FTDGD I+MCPE
Sbjct: 2020 RIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKQFIFTDGDLIDMCPE 2079

Query: 192  FGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYT 251
             GIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYT
Sbjct: 2080 LGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYT 2139

Query: 252  LYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDE 311
            LYKLCEEQLTKQVHYDFGLRNILSVLR+LGAAKRVNS+D+ESTIVMRVLRDMNLSKLIDE
Sbjct: 2140 LYKLCEEQLTKQVHYDFGLRNILSVLRTLGAAKRVNSKDSESTIVMRVLRDMNLSKLIDE 2199

Query: 312  DEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRH 371
            DEPLFISLVADLFPNQALEKT+YP LE AI +Q E AGLI+HPPWVLKLIQLYETQRVRH
Sbjct: 2200 DEPLFISLVADLFPNQALEKTSYPELEAAINQQVEEAGLIYHPPWVLKLIQLYETQRVRH 2259

Query: 372  GIMTLGPTGA 381
            GIMTLGPTGA
Sbjct: 2260 GIMTLGPTGA 2269

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328779229|ref|XP_001121322.2| PREDICTED: dynein heavy chain 5, axonemal [Apis mellifera] Back     alignment and taxonomy information
>gi|350414937|ref|XP_003490478.1| PREDICTED: dynein heavy chain 5, axonemal-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307167408|gb|EFN60993.1| Dynein heavy chain 5, axonemal [Camponotus floridanus] Back     alignment and taxonomy information
>gi|340714875|ref|XP_003395948.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|345497345|ref|XP_001602948.2| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242023054|ref|XP_002431951.1| dynein heavy chain, cytosolic, putative [Pediculus humanus corporis] gi|212517302|gb|EEB19213.1| dynein heavy chain, cytosolic, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|195037857|ref|XP_001990377.1| GH19310 [Drosophila grimshawi] gi|193894573|gb|EDV93439.1| GH19310 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|195108107|ref|XP_001998634.1| GI23526 [Drosophila mojavensis] gi|193915228|gb|EDW14095.1| GI23526 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195395448|ref|XP_002056348.1| GJ10278 [Drosophila virilis] gi|194143057|gb|EDW59460.1| GJ10278 [Drosophila virilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
FB|FBgn0037726 4719 CG9492 [Drosophila melanogaste 0.966 0.078 0.845 8.6e-169
UNIPROTKB|F1LNS7 3870 Dnah5 "Protein Dnah5" [Rattus 0.958 0.094 0.758 8.6e-151
UNIPROTKB|Q8TE73 4624 DNAH5 "Dynein heavy chain 5, a 0.958 0.079 0.760 4.1e-150
MGI|MGI:107718 4621 Dnahc5 "dynein, axonemal, heav 0.958 0.079 0.755 5.2e-150
UNIPROTKB|E1BMG2 4624 DNAH5 "Uncharacterized protein 0.958 0.079 0.760 5.2e-150
UNIPROTKB|F1NMK9 4582 DNAH5 "Uncharacterized protein 0.958 0.080 0.758 2.8e-149
UNIPROTKB|F1NML0 4585 DNAH5 "Uncharacterized protein 0.958 0.080 0.758 2.8e-149
UNIPROTKB|F1P6C6 4623 DNAH5 "Uncharacterized protein 0.958 0.079 0.758 1.3e-148
UNIPROTKB|F1P6D8 4624 DNAH5 "Uncharacterized protein 0.958 0.079 0.758 1.3e-148
UNIPROTKB|J9P6H1 3391 DNAH5 "Uncharacterized protein 0.958 0.108 0.756 6e-148
FB|FBgn0037726 CG9492 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1659 (589.1 bits), Expect = 8.6e-169, P = 8.6e-169
 Identities = 313/370 (84%), Positives = 332/370 (89%)

Query:    12 RWFLDLECRMNIKSVNDFEWLKQCRFYFKDDLDKTWINITDVTFTYQNEYLGCTERLVIT 71
             R   D+ CRMNIKS NDFEWLKQCRFYFK+DLDKTWI++TDVTFTYQNEYLGCT+RLVIT
Sbjct:  1941 RDIFDILCRMNIKSANDFEWLKQCRFYFKEDLDKTWISVTDVTFTYQNEYLGCTDRLVIT 2000

Query:    72 PLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLG 131
             PLTDRCYITLAQALT+SMGG+PCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLG
Sbjct:  2001 PLTDRCYITLAQALTLSMGGAPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLG 2060

Query:   132 RIYKGLAQSGSWGCFDEFNRIELPXXXXXXXXXXXXXXXXXXXXXXFVFTDGDSIEMCPE 191
             RIYKGLAQSGSWGCFDEFNRIELP                      F+FTDGD+IEM PE
Sbjct:  2061 RIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLTAKKEKRKTFLFTDGDTIEMNPE 2120

Query:   192 FGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYT 251
             FGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYT
Sbjct:  2121 FGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYT 2180

Query:   252 LYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDE 311
             LYKLCEEQLTKQVHYDFGLRNILSVLR+LGAAKR NS+DTESTIVMRVLRDMNLSKLID+
Sbjct:  2181 LYKLCEEQLTKQVHYDFGLRNILSVLRTLGAAKRRNSKDTESTIVMRVLRDMNLSKLIDD 2240

Query:   312 DEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRH 371
             DEPLF+SLV+DLFPNQ LEKT YP LE AI +Q + A L++HPPWVLKLIQLYETQ VRH
Sbjct:  2241 DEPLFMSLVSDLFPNQTLEKTNYPELEAAILQQTDEASLVYHPPWVLKLIQLYETQHVRH 2300

Query:   372 GIMTLGPTGA 381
             GIMTLGP+GA
Sbjct:  2301 GIMTLGPSGA 2310
GO:0003774 "motor activity" evidence=ISS
GO:0005875 "microtubule associated complex" evidence=ISS;IDA
GO:0005858 "axonemal dynein complex" evidence=ISS
GO:0030286 "dynein complex" evidence=ISS
GO:0007018 "microtubule-based movement" evidence=IEA;ISS
GO:0042623 "ATPase activity, coupled" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0003777 "microtubule motor activity" evidence=IEA
GO:0016887 "ATPase activity" evidence=IEA
GO:0007605 "sensory perception of sound" evidence=IMP
UNIPROTKB|F1LNS7 Dnah5 "Protein Dnah5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8TE73 DNAH5 "Dynein heavy chain 5, axonemal" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:107718 Dnahc5 "dynein, axonemal, heavy chain 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMG2 DNAH5 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NMK9 DNAH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NML0 DNAH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P6C6 DNAH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1P6D8 DNAH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9P6H1 DNAH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8TE73DYH5_HUMANNo assigned EC number0.80160.95820.0793yesN/A
Q8VHE6DYH5_MOUSENo assigned EC number0.79610.95820.0794yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
pfam12774231 pfam12774, AAA_6, Hydrolytic ATP binding site of d 1e-102
COG5245 3164 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] 1e-13
COG5245 3164 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] 3e-06
COG5271 4600 COG5271, MDN1, AAA ATPase containing von Willebran 6e-04
pfam07728135 pfam07728, AAA_5, AAA domain (dynein-related subfa 0.003
>gnl|CDD|193250 pfam12774, AAA_6, Hydrolytic ATP binding site of dynein motor region D1 Back     alignment and domain information 
 Score =  301 bits (773), Expect = e-102
 Identities = 145/229 (63%), Positives = 170/229 (74%), Gaps = 1/229 (0%)

Query: 57  YQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYV 116
           Y  EYLG T RLVITPLTDRCYITL Q+L ++M G+P GPAGTGKTET KD+G+ L   V
Sbjct: 1   YSYEYLGNTPRLVITPLTDRCYITLTQSLHLTMSGAPAGPAGTGKTETTKDLGRALGIMV 60

Query: 117 VVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKK 176
            VFNCS+QMDY+  G IYKGLAQ+G+WGCFDEFNRI + VLSV A QV  V  A ++KK+
Sbjct: 61  YVFNCSEQMDYKSCGNIYKGLAQTGAWGCFDEFNRISVEVLSVVAVQVKCVQDAIRDKKQ 120

Query: 177 SFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLAS 236
            F F  G+ I + P  GIFITMNPGYAGR ELPENLK  FR  AM+VPD ++I  + L +
Sbjct: 121 WFNFL-GEEISLIPSVGIFITMNPGYAGRTELPENLKALFRPCAMVVPDFELICEIMLVA 179

Query: 237 CGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKR 285
            GFLE   LARKF TLY LC+E L+KQ HYD+GLR I SVL   G+ KR
Sbjct: 180 EGFLEARLLARKFITLYTLCKELLSKQDHYDWGLRAIKSVLVVAGSLKR 228

the 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This particular family is the D1 unit of the motor and contains the hydrolytic ATP binding site. Length = 231
>gnl|CDD|227570 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|227570 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|219538 pfam07728, AAA_5, AAA domain (dynein-related subfamily) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 383
PF12774231 AAA_6: Hydrolytic ATP binding site of dynein motor 100.0
TIGR01650327 PD_CobS cobaltochelatase, CobS subunit. This model 99.93
TIGR02640262 gas_vesic_GvpN gas vesicle protein GvpN. Members o 99.93
COG5271 4600 MDN1 AAA ATPase containing von Willebrand factor t 99.93
COG5271 4600 MDN1 AAA ATPase containing von Willebrand factor t 99.93
PF12775272 AAA_7: P-loop containing dynein motor region D3; P 99.92
PHA02244383 ATPase-like protein 99.79
KOG3595|consensus 1395 99.76
PF07728139 AAA_5: AAA domain (dynein-related subfamily); Inte 99.72
PF07726131 AAA_3: ATPase family associated with various cellu 99.71
COG0714329 MoxR-like ATPases [General function prediction onl 99.7
KOG1808|consensus 1856 99.69
COG5245 3164 DYN1 Dynein, heavy chain [Cytoskeleton] 99.66
KOG0733|consensus 802 99.49
KOG0736|consensus 953 99.4
COG5245 3164 DYN1 Dynein, heavy chain [Cytoskeleton] 99.36
PRK11331459 5-methylcytosine-specific restriction enzyme subun 99.36
KOG0730|consensus 693 99.32
TIGR01243 733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 99.2
TIGR02639 731 ClpA ATP-dependent Clp protease ATP-binding subuni 99.18
PRK11034 758 clpA ATP-dependent Clp protease ATP-binding subuni 99.15
PF05496233 RuvB_N: Holliday junction DNA helicase ruvB N-term 99.13
KOG1808|consensus 1856 99.1
PRK00080328 ruvB Holliday junction DNA helicase RuvB; Reviewed 99.08
COG0466 782 Lon ATP-dependent Lon protease, bacterial type [Po 99.03
PF00004132 AAA: ATPase family associated with various cellula 99.01
PF07724171 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR 99.0
COG0542786 clpA ATP-binding subunits of Clp protease and DnaK 99.0
smart00350509 MCM minichromosome maintenance proteins. 98.99
TIGR00763 775 lon ATP-dependent protease La. This protein is ind 98.99
PRK13531 498 regulatory ATPase RavA; Provisional 98.97
CHL00095 821 clpC Clp protease ATP binding subunit 98.96
COG1239423 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolis 98.95
CHL00195489 ycf46 Ycf46; Provisional 98.92
PRK11034758 clpA ATP-dependent Clp protease ATP-binding subuni 98.92
PTZ00454398 26S protease regulatory subunit 6B-like protein; P 98.9
TIGR02639731 ClpA ATP-dependent Clp protease ATP-binding subuni 98.89
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 98.88
TIGR00635305 ruvB Holliday junction DNA helicase, RuvB subunit. 98.87
TIGR02974329 phageshock_pspF psp operon transcriptional activat 98.87
PRK13407334 bchI magnesium chelatase subunit I; Provisional 98.86
PF01078206 Mg_chelatase: Magnesium chelatase, subunit ChlI; I 98.85
TIGR03345 852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 98.84
PRK11608326 pspF phage shock protein operon transcriptional ac 98.84
KOG0735|consensus 952 98.83
KOG0738|consensus491 98.81
TIGR01241 495 FtsH_fam ATP-dependent metalloprotease FtsH. HflB( 98.81
PRK15424538 propionate catabolism operon regulatory protein Pr 98.81
PRK03992389 proteasome-activating nucleotidase; Provisional 98.79
PRK10787 784 DNA-binding ATP-dependent protease La; Provisional 98.79
KOG0730|consensus693 98.78
PF00158168 Sigma54_activat: Sigma-54 interaction domain; Inte 98.77
KOG2004|consensus 906 98.77
TIGR03346 852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 98.77
TIGR02902 531 spore_lonB ATP-dependent protease LonB. Members of 98.76
PLN03025319 replication factor C subunit; Provisional 98.76
TIGR02030337 BchI-ChlI magnesium chelatase ATPase subunit I. Th 98.74
PRK14956 484 DNA polymerase III subunits gamma and tau; Provisi 98.74
PRK04195 482 replication factor C large subunit; Provisional 98.74
COG2255332 RuvB Holliday junction resolvasome, helicase subun 98.72
PRK14962 472 DNA polymerase III subunits gamma and tau; Provisi 98.71
TIGR01817534 nifA Nif-specific regulatory protein. This model r 98.71
TIGR03689512 pup_AAA proteasome ATPase. In the Actinobacteria, 98.7
CHL00206 2281 ycf2 Ycf2; Provisional 98.7
TIGR02881261 spore_V_K stage V sporulation protein K. Members o 98.69
TIGR00382413 clpX endopeptidase Clp ATP-binding regulatory subu 98.69
TIGR00368499 Mg chelatase-related protein. The N-terminal end m 98.68
COG2256 436 MGS1 ATPase related to the helicase subunit of the 98.67
TIGR02880284 cbbX_cfxQ probable Rubsico expression protein CbbX 98.67
KOG0737|consensus386 98.67
PHA02544316 44 clamp loader, small subunit; Provisional 98.66
CHL00181287 cbbX CbbX; Provisional 98.66
CHL00176 638 ftsH cell division protein; Validated 98.66
PRK05342412 clpX ATP-dependent protease ATP-binding subunit Cl 98.66
KOG0734|consensus 752 98.66
TIGR03346852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 98.65
PTZ00361438 26 proteosome regulatory subunit 4-like protein; P 98.65
CHL00081350 chlI Mg-protoporyphyrin IX chelatase 98.63
PRK07003 830 DNA polymerase III subunits gamma and tau; Validat 98.63
PRK12323 700 DNA polymerase III subunits gamma and tau; Provisi 98.63
PTZ001121164 origin recognition complex 1 protein; Provisional 98.63
TIGR00362405 DnaA chromosomal replication initiator protein Dna 98.62
COG1223368 Predicted ATPase (AAA+ superfamily) [General funct 98.62
TIGR03345852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 98.62
TIGR02442 633 Cob-chelat-sub cobaltochelatase subunit. A number 98.62
TIGR02031 589 BchD-ChlD magnesium chelatase ATPase subunit D. Th 98.62
KOG0741|consensus 744 98.61
COG1222406 RPT1 ATP-dependent 26S proteasome regulatory subun 98.61
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 98.59
TIGR02329526 propionate_PrpR propionate catabolism operon regul 98.59
CHL00095821 clpC Clp protease ATP binding subunit 98.59
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 98.59
PRK14086617 dnaA chromosomal replication initiation protein; P 98.59
PRK05022509 anaerobic nitric oxide reductase transcription reg 98.59
PRK10865857 protein disaggregation chaperone; Provisional 98.59
PRK11388638 DNA-binding transcriptional regulator DhaR; Provis 98.58
PTZ00111 915 DNA replication licensing factor MCM4; Provisional 98.58
PLN00020413 ribulose bisphosphate carboxylase/oxygenase activa 98.57
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 98.56
PRK14960 702 DNA polymerase III subunits gamma and tau; Provisi 98.56
PRK07994 647 DNA polymerase III subunits gamma and tau; Validat 98.56
PRK14088440 dnaA chromosomal replication initiation protein; P 98.54
PRK14958 509 DNA polymerase III subunits gamma and tau; Provisi 98.54
PRK00149450 dnaA chromosomal replication initiation protein; R 98.54
KOG0482|consensus721 98.53
KOG0736|consensus953 98.52
COG2204464 AtoC Response regulator containing CheY-like recei 98.52
PRK10733 644 hflB ATP-dependent metalloprotease; Reviewed 98.51
COG0464494 SpoVK ATPases of the AAA+ class [Posttranslational 98.51
PRK10923469 glnG nitrogen regulation protein NR(I); Provisiona 98.5
TIGR01242364 26Sp45 26S proteasome subunit P45 family. Many pro 98.5
PRK14963 504 DNA polymerase III subunits gamma and tau; Provisi 98.49
PRK14957 546 DNA polymerase III subunits gamma and tau; Provisi 98.49
COG1221403 PspF Transcriptional regulators containing an AAA- 98.49
PRK13342 413 recombination factor protein RarA; Reviewed 98.49
PRK06645 507 DNA polymerase III subunits gamma and tau; Validat 98.49
PRK08084235 DNA replication initiation factor; Provisional 98.49
PRK12422445 chromosomal replication initiation protein; Provis 98.49
KOG0478|consensus804 98.48
PRK10820520 DNA-binding transcriptional regulator TyrR; Provis 98.48
PF14532138 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 98.47
PRK06620214 hypothetical protein; Validated 98.47
PRK14969 527 DNA polymerase III subunits gamma and tau; Provisi 98.47
PRK12402337 replication factor C small subunit 2; Reviewed 98.46
PRK00411394 cdc6 cell division control protein 6; Reviewed 98.46
PRK14964 491 DNA polymerase III subunits gamma and tau; Provisi 98.45
PRK07940394 DNA polymerase III subunit delta'; Validated 98.45
PRK14951 618 DNA polymerase III subunits gamma and tau; Provisi 98.45
PRK15429686 formate hydrogenlyase transcriptional activator Fh 98.44
TIGR02928365 orc1/cdc6 family replication initiation protein. M 98.44
PRK14949 944 DNA polymerase III subunits gamma and tau; Provisi 98.41
PRK05896 605 DNA polymerase III subunits gamma and tau; Validat 98.39
PRK09862506 putative ATP-dependent protease; Provisional 98.39
TIGR02915445 PEP_resp_reg putative PEP-CTERM system response re 98.39
TIGR02397355 dnaX_nterm DNA polymerase III, subunit gamma and t 98.38
PRK07133 725 DNA polymerase III subunits gamma and tau; Validat 98.36
PRK14959 624 DNA polymerase III subunits gamma and tau; Provisi 98.36
smart00382148 AAA ATPases associated with a variety of cellular 98.36
PRK08903227 DnaA regulatory inactivator Hda; Validated 98.35
PRK08691 709 DNA polymerase III subunits gamma and tau; Validat 98.35
PRK00440319 rfc replication factor C small subunit; Reviewed 98.34
PRK10865 857 protein disaggregation chaperone; Provisional 98.33
PRK06893229 DNA replication initiation factor; Validated 98.32
PRK05563 559 DNA polymerase III subunits gamma and tau; Validat 98.32
PRK13341 725 recombination factor protein RarA/unknown domain f 98.32
KOG0743|consensus457 98.32
PRK09087226 hypothetical protein; Validated 98.3
KOG0731|consensus 774 98.29
KOG0744|consensus423 98.29
PRK14965 576 DNA polymerase III subunits gamma and tau; Provisi 98.29
PRK08451 535 DNA polymerase III subunits gamma and tau; Validat 98.29
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 98.28
PRK08727233 hypothetical protein; Validated 98.27
PRK14948 620 DNA polymerase III subunits gamma and tau; Provisi 98.25
KOG0733|consensus802 98.24
PRK11361457 acetoacetate metabolism regulatory protein AtoC; P 98.24
PRK15115444 response regulator GlrR; Provisional 98.24
COG3829560 RocR Transcriptional regulator containing PAS, AAA 98.23
PRK14952 584 DNA polymerase III subunits gamma and tau; Provisi 98.22
PRK13406 584 bchD magnesium chelatase subunit D; Provisional 98.22
KOG0739|consensus439 98.21
TIGR02903 615 spore_lon_C ATP-dependent protease, Lon family. Me 98.21
PRK07764 824 DNA polymerase III subunits gamma and tau; Validat 98.19
KOG0727|consensus408 98.19
PRK14970367 DNA polymerase III subunits gamma and tau; Provisi 98.19
PRK14953 486 DNA polymerase III subunits gamma and tau; Provisi 98.18
COG1474366 CDC6 Cdc6-related protein, AAA superfamily ATPase 98.18
COG0606490 Predicted ATPase with chaperone activity [Posttran 98.17
TIGR00678188 holB DNA polymerase III, delta' subunit. At positi 98.17
PRK14955397 DNA polymerase III subunits gamma and tau; Provisi 98.17
PRK05642234 DNA replication initiation factor; Validated 98.16
smart00763361 AAA_PrkA PrkA AAA domain. This is a family of PrkA 98.15
TIGR01818463 ntrC nitrogen regulation protein NR(I). This model 98.15
KOG0989|consensus346 98.15
PRK06647 563 DNA polymerase III subunits gamma and tau; Validat 98.15
PRK14087450 dnaA chromosomal replication initiation protein; P 98.14
PRK06305 451 DNA polymerase III subunits gamma and tau; Validat 98.11
PRK04132846 replication factor C small subunit; Provisional 98.07
PRK14950 585 DNA polymerase III subunits gamma and tau; Provisi 98.06
PRK09111 598 DNA polymerase III subunits gamma and tau; Validat 98.05
COG1241682 MCM2 Predicted ATPase involved in replication cont 98.02
COG0593408 DnaA ATPase involved in DNA replication initiation 97.98
PF00493331 MCM: MCM2/3/5 family This family extends the MCM d 97.95
KOG0740|consensus428 97.92
COG1219408 ClpX ATP-dependent protease Clp, ATPase subunit [P 97.92
PRK14954 620 DNA polymerase III subunits gamma and tau; Provisi 97.91
COG0542 786 clpA ATP-binding subunits of Clp protease and DnaK 97.91
PRK10365441 transcriptional regulatory protein ZraR; Provision 97.91
COG3604550 FhlA Transcriptional regulator containing GAF, AAA 97.9
COG0470325 HolB ATPase involved in DNA replication [DNA repli 97.89
PRK14971 614 DNA polymerase III subunits gamma and tau; Provisi 97.89
PF13173128 AAA_14: AAA domain 97.89
TIGR00764 608 lon_rel lon-related putative ATP-dependent proteas 97.88
KOG0480|consensus764 97.88
KOG0745|consensus564 97.87
PRK05707328 DNA polymerase III subunit delta'; Validated 97.87
KOG2028|consensus 554 97.84
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 97.82
COG0465 596 HflB ATP-dependent Zn proteases [Posttranslational 97.8
KOG0991|consensus333 97.75
PRK09112351 DNA polymerase III subunit delta'; Validated 97.72
KOG0742|consensus630 97.71
KOG0735|consensus952 97.71
KOG0728|consensus404 97.71
KOG2035|consensus351 97.68
KOG1969|consensus 877 97.68
CHL00195 489 ycf46 Ycf46; Provisional 97.68
PRK08058329 DNA polymerase III subunit delta'; Validated 97.67
KOG1051|consensus898 97.64
KOG0726|consensus440 97.63
COG0464 494 SpoVK ATPases of the AAA+ class [Posttranslational 97.61
COG2812 515 DnaX DNA polymerase III, gamma/tau subunits [DNA r 97.57
PRK06090319 DNA polymerase III subunit delta'; Validated 97.56
PF03028 707 Dynein_heavy: Dynein heavy chain and region D6 of 97.54
PRK06871325 DNA polymerase III subunit delta'; Validated 97.53
PRK07993334 DNA polymerase III subunit delta'; Validated 97.53
KOG0729|consensus435 97.52
PRK05564313 DNA polymerase III subunit delta'; Validated 97.51
KOG0481|consensus729 97.51
PRK08769319 DNA polymerase III subunit delta'; Validated 97.48
TIGR02688449 conserved hypothetical protein TIGR02688. Members 97.45
PRK13765 637 ATP-dependent protease Lon; Provisional 97.43
PRK08116268 hypothetical protein; Validated 97.42
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 97.4
PRK08181269 transposase; Validated 97.4
PF05673249 DUF815: Protein of unknown function (DUF815); Inte 97.37
PRK08118167 topology modulation protein; Reviewed 97.35
PRK07471365 DNA polymerase III subunit delta'; Validated 97.32
PRK08699325 DNA polymerase III subunit delta'; Validated 97.31
COG3284606 AcoR Transcriptional activator of acetoin/glycerol 97.29
PHA02624647 large T antigen; Provisional 97.28
TIGR00390441 hslU ATP-dependent protease HslVU, ATPase subunit. 97.24
PRK06964342 DNA polymerase III subunit delta'; Validated 97.23
PF13177162 DNA_pol3_delta2: DNA polymerase III, delta subunit 97.23
PF03969362 AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 97.18
PRK05201443 hslU ATP-dependent protease ATP-binding subunit Hs 97.17
PRK09183259 transposase/IS protein; Provisional 97.11
PF13207121 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 97.1
PRK06921266 hypothetical protein; Provisional 97.0
COG3283511 TyrR Transcriptional regulator of aromatic amino a 96.99
KOG0477|consensus854 96.98
PRK06526254 transposase; Provisional 96.98
PF05970364 PIF1: PIF1-like helicase; InterPro: IPR010285 This 96.97
PRK12377248 putative replication protein; Provisional 96.96
PF00910107 RNA_helicase: RNA helicase; InterPro: IPR000605 He 96.95
PRK07261171 topology modulation protein; Provisional 96.93
PRK06835329 DNA replication protein DnaC; Validated 96.91
PF12780268 AAA_8: P-loop containing dynein motor region D4; I 96.89
PHA02774613 E1; Provisional 96.88
COG1224450 TIP49 DNA helicase TIP49, TBP-interacting protein 96.88
PRK07952244 DNA replication protein DnaC; Validated 96.86
PRK07399314 DNA polymerase III subunit delta'; Validated 96.81
PF1324576 AAA_19: Part of AAA domain 96.78
KOG0652|consensus424 96.76
PRK10536262 hypothetical protein; Provisional 96.75
PF06068398 TIP49: TIP49 C-terminus; InterPro: IPR010339 This 96.69
PF05729166 NACHT: NACHT domain 96.67
KOG2170|consensus344 96.63
cd01120165 RecA-like_NTPases RecA-like NTPases. This family i 96.61
PF01695178 IstB_IS21: IstB-like ATP binding protein; InterPro 96.56
KOG0651|consensus388 96.49
PF03215 519 Rad17: Rad17 cell cycle checkpoint protein 96.47
PF13604196 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL 96.46
TIGR00150133 HI0065_YjeE ATPase, YjeE family. Members of this f 96.46
PRK00131175 aroK shikimate kinase; Reviewed 96.45
PRK05917290 DNA polymerase III subunit delta'; Validated 96.43
COG1102179 Cmk Cytidylate kinase [Nucleotide transport and me 96.4
COG1484254 DnaC DNA replication protein [DNA replication, rec 96.37
PRK08939306 primosomal protein DnaI; Reviewed 96.36
COG1220444 HslU ATP-dependent protease HslVU (ClpYQ), ATPase 96.35
PF13671143 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 96.31
COG4650531 RtcR Sigma54-dependent transcription regulator con 96.29
PHA01747425 putative ATP-dependent protease 96.27
PRK04040188 adenylate kinase; Provisional 96.24
cd02020147 CMPK Cytidine monophosphate kinase (CMPK) catalyze 96.2
PRK13947171 shikimate kinase; Provisional 96.2
KOG3347|consensus176 96.19
COG1485367 Predicted ATPase [General function prediction only 96.16
PF03029238 ATP_bind_1: Conserved hypothetical ATP binding pro 96.15
PHA00729226 NTP-binding motif containing protein 96.1
KOG0732|consensus 1080 96.1
TIGR01313163 therm_gnt_kin carbohydrate kinase, thermoresistant 96.1
cd00464154 SK Shikimate kinase (SK) is the fifth enzyme in th 96.1
KOG1970|consensus 634 96.08
PRK05800170 cobU adenosylcobinamide kinase/adenosylcobinamide- 96.04
TIGR00602 637 rad24 checkpoint protein rad24. This family is bas 96.02
PF02367123 UPF0079: Uncharacterised P-loop hydrolase UPF0079; 96.01
PRK03839180 putative kinase; Provisional 96.01
PRK00625173 shikimate kinase; Provisional 95.96
KOG0741|consensus744 95.93
PF13086236 AAA_11: AAA domain; PDB: 2XZL_A 2XZO_A 2WJY_A 2WJV 95.91
COG1936180 Predicted nucleotide kinase (related to CMP and AM 95.9
TIGR03574249 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem 95.88
KOG0990|consensus360 95.84
PRK06217183 hypothetical protein; Validated 95.8
PRK13949169 shikimate kinase; Provisional 95.77
KOG1533|consensus290 95.73
PRK06762166 hypothetical protein; Provisional 95.71
TIGR01359183 UMP_CMP_kin_fam UMP-CMP kinase family. This subfam 95.69
PRK12723388 flagellar biosynthesis regulator FlhF; Provisional 95.68
cd0201969 NK Nucleoside/nucleotide kinase (NK) is a protein 95.67
TIGR02782299 TrbB_P P-type conjugative transfer ATPase TrbB. Th 95.66
PRK13946184 shikimate kinase; Provisional 95.66
PRK06696223 uridine kinase; Validated 95.64
PRK14530215 adenylate kinase; Provisional 95.6
cd01130186 VirB11-like_ATPase Type IV secretory pathway compo 95.59
KOG0479|consensus 818 95.59
cd00227175 CPT Chloramphenicol (Cm) phosphotransferase (CPT). 95.58
PRK14532188 adenylate kinase; Provisional 95.57
TIGR03499282 FlhF flagellar biosynthetic protein FlhF. 95.57
PRK13833323 conjugal transfer protein TrbB; Provisional 95.56
PF01443234 Viral_helicase1: Viral (Superfamily 1) RNA helicas 95.54
TIGR01360188 aden_kin_iso1 adenylate kinase, isozyme 1 subfamil 95.51
cd02021150 GntK Gluconate kinase (GntK) catalyzes the phospho 95.5
PF01745233 IPT: Isopentenyl transferase; InterPro: IPR002648 95.49
PRK03731171 aroL shikimate kinase II; Reviewed 95.48
PRK05057172 aroK shikimate kinase I; Reviewed 95.47
PF13191185 AAA_16: AAA ATPase domain; PDB: 2V1U_A. 95.46
PF13521163 AAA_28: AAA domain; PDB: 1LW7_A. 95.46
cd03115173 SRP The signal recognition particle (SRP) mediates 95.45
COG0703172 AroK Shikimate kinase [Amino acid transport and me 95.44
PRK14531183 adenylate kinase; Provisional 95.41
PRK14722374 flhF flagellar biosynthesis regulator FlhF; Provis 95.41
cd01428194 ADK Adenylate kinase (ADK) catalyzes the reversibl 95.4
PF13238129 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB 95.38
PRK07132299 DNA polymerase III subunit delta'; Validated 95.3
PRK06547172 hypothetical protein; Provisional 95.25
PRK00023225 cmk cytidylate kinase; Provisional 95.24
PRK04182180 cytidylate kinase; Provisional 95.24
PRK10078186 ribose 1,5-bisphosphokinase; Provisional 95.23
PF00406151 ADK: Adenylate kinase; InterPro: IPR000850 Adenyla 95.22
TIGR02173171 cyt_kin_arch cytidylate kinase, putative. Proteins 95.22
cd02027149 APSK Adenosine 5'-phosphosulfate kinase (APSK) cat 95.2
COG0563178 Adk Adenylate kinase and related kinases [Nucleoti 95.13
PRK02496184 adk adenylate kinase; Provisional 95.11
PF00448196 SRP54: SRP54-type protein, GTPase domain; InterPro 95.07
PRK10646153 ADP-binding protein; Provisional 95.06
PRK08233182 hypothetical protein; Provisional 95.06
PF05272198 VirE: Virulence-associated protein E; InterPro: IP 95.05
cd02028179 UMPK_like Uridine monophosphate kinase_like (UMPK_ 95.04
PRK05480209 uridine/cytidine kinase; Provisional 95.03
PF05621302 TniB: Bacterial TniB protein; InterPro: IPR008868 95.02
PTZ00088229 adenylate kinase 1; Provisional 94.99
PRK14528186 adenylate kinase; Provisional 94.96
TIGR02768744 TraA_Ti Ti-type conjugative transfer relaxase TraA 94.92
TIGR01351210 adk adenylate kinases. Adenylate kinase (EC 2.7.4. 94.88
cd02023198 UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. 94.86
COG4088261 Predicted nucleotide kinase [Nucleotide transport 94.82
cd01123235 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of r 94.82
PRK04296190 thymidine kinase; Provisional 94.79
PRK06851367 hypothetical protein; Provisional 94.75
PRK13900332 type IV secretion system ATPase VirB11; Provisiona 94.73
COG2804500 PulE Type II secretory pathway, ATPase PulE/Tfp pi 94.73
PRK13851344 type IV secretion system protein VirB11; Provision 94.71
PRK13948182 shikimate kinase; Provisional 94.71
PRK08154309 anaerobic benzoate catabolism transcriptional regu 94.64
PRK05703424 flhF flagellar biosynthesis regulator FlhF; Valida 94.63
TIGR02525372 plasmid_TraJ plasmid transfer ATPase TraJ. Members 94.59
PRK00279215 adk adenylate kinase; Reviewed 94.55
TIGR02322179 phosphon_PhnN phosphonate metabolism protein/1,5-b 94.5
PLN02200234 adenylate kinase family protein 94.5
cd01128249 rho_factor Transcription termination factor rho is 94.49
PRK07667193 uridine kinase; Provisional 94.46
COG0283222 Cmk Cytidylate kinase [Nucleotide transport and me 94.45
cd02029277 PRK_like Phosphoribulokinase-like (PRK-like) is a 94.41
COG0802149 Predicted ATPase or kinase [General function predi 94.39
PRK05818261 DNA polymerase III subunit delta'; Validated 94.39
PRK13894319 conjugal transfer ATPase TrbB; Provisional 94.38
TIGR01618220 phage_P_loop phage nucleotide-binding protein. Thi 94.38
KOG1514|consensus767 94.37
TIGR00064272 ftsY signal recognition particle-docking protein F 94.37
COG1222 406 RPT1 ATP-dependent 26S proteasome regulatory subun 94.35
PF03266168 NTPase_1: NTPase; InterPro: IPR004948 This entry r 94.34
TIGR01425429 SRP54_euk signal recognition particle protein SRP5 94.32
PF06431417 Polyoma_lg_T_C: Polyomavirus large T antigen C-ter 94.32
PF07931174 CPT: Chloramphenicol phosphotransferase-like prote 94.31
TIGR02237209 recomb_radB DNA repair and recombination protein R 94.31
COG1419407 FlhF Flagellar GTP-binding protein [Cell motility 94.29
PRK11545163 gntK gluconate kinase 1; Provisional 94.29
KOG2543|consensus 438 94.28
PRK13889 988 conjugal transfer relaxase TraA; Provisional 94.24
TIGR00376 637 DNA helicase, putative. The gene product may repre 94.22
PF13479213 AAA_24: AAA domain 94.2
PRK09361225 radB DNA repair and recombination protein RadB; Pr 94.17
cd02025220 PanK Pantothenate kinase (PanK) catalyzes the phos 94.17
PRK14737186 gmk guanylate kinase; Provisional 94.15
TIGR00767415 rho transcription termination factor Rho. Members 94.14
PF14516331 AAA_35: AAA-like domain 94.13
TIGR01613304 primase_Cterm phage/plasmid primase, P4 family, C- 94.09
PF00485194 PRK: Phosphoribulokinase / Uridine kinase family; 94.08
cd01672200 TMPK Thymidine monophosphate kinase (TMPK), also k 94.07
PF02562205 PhoH: PhoH-like protein; InterPro: IPR003714 PhoH 94.07
cd01124187 KaiC KaiC is a circadian clock protein primarily f 94.05
PRK06851367 hypothetical protein; Provisional 94.04
PRK01184184 hypothetical protein; Provisional 94.04
KOG1942|consensus456 94.04
PRK13768253 GTPase; Provisional 93.99
PF06048286 DUF927: Domain of unknown function (DUF927); Inter 93.99
PF06745226 KaiC: KaiC; InterPro: IPR014774 This entry represe 93.97
PRK10416318 signal recognition particle-docking protein FtsY; 93.97
PRK14527191 adenylate kinase; Provisional 93.94
cd00544169 CobU Adenosylcobinamide kinase / adenosylcobinamid 93.91
PRK14729300 miaA tRNA delta(2)-isopentenylpyrophosphate transf 93.9
TIGR01448720 recD_rel helicase, putative, RecD/TraA family. Thi 93.9
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 93.87
PLN02165334 adenylate isopentenyltransferase 93.85
PRK00889175 adenylylsulfate kinase; Provisional 93.84
PRK00300205 gmk guanylate kinase; Provisional 93.83
PRK00771437 signal recognition particle protein Srp54; Provisi 93.78
TIGR01526325 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltr 93.76
PRK14526211 adenylate kinase; Provisional 93.74
PRK00091307 miaA tRNA delta(2)-isopentenylpyrophosphate transf 93.73
PRK14237267 phosphate transporter ATP-binding protein; Provisi 93.71
PF13337457 Lon_2: Putative ATP-dependent Lon protease 93.71
cd01393226 recA_like RecA is a bacterial enzyme which has rol 93.68
PRK14974336 cell division protein FtsY; Provisional 93.65
cd00071137 GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. 93.61
cd03114148 ArgK-like The function of this protein family is u 93.57
TIGR00017217 cmk cytidylate kinase. This family consists of cyt 93.55
PRK15455 644 PrkA family serine protein kinase; Provisional 93.53
PF00437270 T2SE: Type II/IV secretion system protein; InterPr 93.52
PRK12726407 flagellar biosynthesis regulator FlhF; Provisional 93.51
PRK13975196 thymidylate kinase; Provisional 93.5
PLN02199303 shikimate kinase 93.46
PRK10867433 signal recognition particle protein; Provisional 93.44
PRK08099399 bifunctional DNA-binding transcriptional repressor 93.43
PTZ00301210 uridine kinase; Provisional 93.42
TIGR00041195 DTMP_kinase thymidylate kinase. Function: phosphor 93.37
TIGR03263180 guanyl_kin guanylate kinase. Members of this famil 93.36
COG2607287 Predicted ATPase (AAA+ superfamily) [General funct 93.31
PF04851184 ResIII: Type III restriction enzyme, res subunit; 93.29
PRK15453290 phosphoribulokinase; Provisional 93.25
TIGR00235207 udk uridine kinase. Model contains a number of lon 93.24
PRK05541176 adenylylsulfate kinase; Provisional 93.22
PRK12724432 flagellar biosynthesis regulator FlhF; Provisional 93.22
cd02024187 NRK1 Nicotinamide riboside kinase (NRK) is an enzy 93.17
PHA02530300 pseT polynucleotide kinase; Provisional 93.16
PRK07276290 DNA polymerase III subunit delta'; Validated 93.16
cd03221144 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is 93.14
PRK13973213 thymidylate kinase; Provisional 93.07
PRK04301317 radA DNA repair and recombination protein RadA; Va 93.07
PRK14529223 adenylate kinase; Provisional 93.05
PRK11889436 flhF flagellar biosynthesis regulator FlhF; Provis 93.04
KOG1803|consensus 649 92.97
TIGR00174287 miaA tRNA isopentenyltransferase (miaA). Catalyzes 92.97
PLN02674244 adenylate kinase 92.96
TIGR00959428 ffh signal recognition particle protein. This mode 92.96
PF1355562 AAA_29: P-loop containing region of AAA domain 92.94
PRK13826 1102 Dtr system oriT relaxase; Provisional 92.88
TIGR02236310 recomb_radA DNA repair and recombination protein R 92.82
PRK12339197 2-phosphoglycerate kinase; Provisional 92.81
PRK12608380 transcription termination factor Rho; Provisional 92.8
cd03222177 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi 92.79
cd01129264 PulE-GspE PulE/GspE The type II secretory pathway 92.78
PRK06995484 flhF flagellar biosynthesis regulator FlhF; Valida 92.76
PF10443 431 RNA12: RNA12 protein; InterPro: IPR018850 Mitochon 92.75
TIGR02788308 VirB11 P-type DNA transfer ATPase VirB11. The VirB 92.74
TIGR00455184 apsK adenylylsulfate kinase (apsK). Important resi 92.74
PRK04220301 2-phosphoglycerate kinase; Provisional 92.72
cd01394218 radB RadB. The archaeal protein radB shares simila 92.71
COG3842352 PotA ABC-type spermidine/putrescine transport syst 92.67
PLN02459261 probable adenylate kinase 92.67
PF08423256 Rad51: Rad51; InterPro: IPR013632 This domain is f 92.66
TIGR02524358 dot_icm_DotB Dot/Icm secretion system ATPase DotB. 92.65
) proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor" target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF06309">PF06309127 Torsin: Torsin; InterPro: IPR010448 This family co 92.65
TIGR01663526 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase 92.63
PRK09825176 idnK D-gluconate kinase; Provisional 92.55
PRK14730195 coaE dephospho-CoA kinase; Provisional 92.55
COG3854308 SpoIIIAA ncharacterized protein conserved in bacte 92.54
TIGR00750300 lao LAO/AO transport system ATPase. Mutations have 92.51
COG3839338 MalK ABC-type sugar transport systems, ATPase comp 92.5
PRK06761282 hypothetical protein; Provisional 92.48
PLN02840 421 tRNA dimethylallyltransferase 92.46
COG1117253 PstB ABC-type phosphate transport system, ATPase c 92.45
PF01583156 APS_kinase: Adenylylsulphate kinase; InterPro: IPR 92.43
KOG3354|consensus191 92.4
PF08303168 tRNA_lig_kinase: tRNA ligase kinase domain; InterP 92.37
PRK09376416 rho transcription termination factor Rho; Provisio 92.36
KOG0727|consensus 408 92.34
PRK11860661 bifunctional 3-phosphoshikimate 1-carboxyvinyltran 92.34
PRK09435332 membrane ATPase/protein kinase; Provisional 92.3
cd00820107 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC 92.23
PF00625183 Guanylate_kin: Guanylate kinase; InterPro: IPR0081 92.18
PRK12338319 hypothetical protein; Provisional 92.18
PRK09518 712 bifunctional cytidylate kinase/GTPase Der; Reviewe 92.15
PRK08356195 hypothetical protein; Provisional 92.15
COG4619223 ABC-type uncharacterized transport system, ATPase 92.15
COG1116248 TauB ABC-type nitrate/sulfonate/bicarbonate transp 92.07
cd00267157 ABC_ATPase ABC (ATP-binding cassette) transporter 91.99
PRK05973237 replicative DNA helicase; Provisional 91.97
COG0324308 MiaA tRNA delta(2)-isopentenylpyrophosphate transf 91.94
PRK05439311 pantothenate kinase; Provisional 91.92
PRK10436462 hypothetical protein; Provisional 91.91
COG0529197 CysC Adenylylsulfate kinase and related kinases [I 91.88
COG0194191 Gmk Guanylate kinase [Nucleotide transport and met 91.85
PRK03846198 adenylylsulfate kinase; Provisional 91.84
PRK14738206 gmk guanylate kinase; Provisional 91.84
PRK13764602 ATPase; Provisional 91.83
cd02022179 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.2 91.82
PF08477119 Miro: Miro-like protein; InterPro: IPR013684 Mitoc 91.82
>PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A Back     alignment and domain information 
Probab=100.00  E-value=5.2e-68  Score=476.58  Aligned_cols=231  Identities=60%  Similarity=1.011  Sum_probs=191.3

Q ss_pred             ccccccCCccceeechhhHHHHHHHHHHHHccCCCCCcCCCCCCccHHHHHHHHHhCCcEEEEeCCCCCCHHHHHHHHhh
Q psy6129          57 YQNEYLGCTERLVITPLTDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKG  136 (383)
Q Consensus        57 YgyEy~g~~~~lv~Tp~t~r~~~~l~~al~~~~~~~l~Gp~GtGKT~~i~~la~~lg~~~~~~~c~~~~~~~~l~~~l~g  136 (383)
                      |||||+|+.+|+|+||+|||||.++.+|++.+.++.+.||+|||||||+|+||+++|+++++|||++.++++.++|+++|
T Consensus         1 YgyEY~G~~~rlv~Tplt~r~~~~l~~al~~~~~~~~~GpagtGKtetik~La~~lG~~~~vfnc~~~~~~~~l~ril~G   80 (231)
T PF12774_consen    1 YGYEYLGNSPRLVITPLTDRCFLTLTQALSLNLGGALSGPAGTGKTETIKDLARALGRFVVVFNCSEQMDYQSLSRILKG   80 (231)
T ss_dssp             -------S-------HHHHHHHHHHHHHHCTTTEEEEESSTTSSHHHHHHHHHHCTT--EEEEETTSSS-HHHHHHHHHH
T ss_pred             CCccccCCCCCceechHHHHHHHHHHHHhccCCCCCCcCCCCCCchhHHHHHHHHhCCeEEEecccccccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCceEEecccccCChhhHHHHHHHHHHHHHHHHhcCceeEecCCcEEEecCCeeEEEeeCCCCCCCCcchHHHHHhc
Q psy6129         137 LAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQF  216 (383)
Q Consensus       137 ~~~~g~w~~~dein~l~~~~ls~l~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~if~T~np~~~g~~~lp~~l~~~f  216 (383)
                      ++++|+|+||||||+++.++||++++++..|+++++++...+.+ .|+.|+++|++++|+||||+|.|+.+||++||++|
T Consensus        81 ~~~~GaW~cfdefnrl~~~vLS~i~~~i~~i~~al~~~~~~~~~-~g~~i~l~~~~~iFiT~np~y~gr~~LP~nLk~lF  159 (231)
T PF12774_consen   81 LAQSGAWLCFDEFNRLSEEVLSVISQQIQSIQDALRAKQKSFTL-EGQEIKLNPNCGIFITMNPGYAGRSELPENLKALF  159 (231)
T ss_dssp             HHHHT-EEEEETCCCSSHHHHHHHHHHHHHHHHHHHCTSSEEEE-TTCEEE--TT-EEEEEE-B-CCCC--S-HHHCTTE
T ss_pred             HhhcCchhhhhhhhhhhHHHHHHHHHHHHHHHHhhccccccccc-CCCEEEEccceeEEEeeccccCCcccCCHhHHHHh
Confidence            99999999999999999999999999999999999999888887 79999999999999999999999999999999999


Q ss_pred             cccccCCCCHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhccCCCCCccChhhhHHHHHhcchhhccCC
Q psy6129         217 RTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNS  288 (383)
Q Consensus       217 r~v~~~~Pd~~~i~ei~l~~~gf~~~~~la~ki~~~~~~~~~~ls~~~hy~f~lR~l~~vi~~~~~~~~~~~  288 (383)
                      |||+|..||.+.|+|++|.+.||.+++.||+|++.+|+++++++|+|.|||||||++|+|+..|+.+||..|
T Consensus       160 Rpvam~~PD~~~I~ei~L~s~GF~~a~~La~kl~~l~~l~~~~lS~q~hydfgLRalk~vl~~a~~~kr~~p  231 (231)
T PF12774_consen  160 RPVAMMVPDLSLIAEILLLSQGFKDAKSLAKKLVSLFQLCKEQLSKQDHYDFGLRALKSVLRMAGSLKRGDP  231 (231)
T ss_dssp             EEEE--S--HHHHHHHHHHCCCTSSHHHHHHHHHHHHHHHHHCS-SSTT---SHHHHHHHHHHHHHHHT---
T ss_pred             heeEEeCCCHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHhhccCccccccHHHHHHHHHHHHHHhcccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999998765

>TIGR01650 PD_CobS cobaltochelatase, CobS subunit Back     alignment and domain information
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN Back     alignment and domain information
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>PF12775 AAA_7: P-loop containing dynein motor region D3; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A Back     alignment and domain information
>PHA02244 ATPase-like protein Back     alignment and domain information
>KOG3595|consensus Back     alignment and domain information
>PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PF07726 AAA_3: ATPase family associated with various cellular activities (AAA); InterPro: IPR011703 This entry includes some of the AAA proteins not detected by the IPR003959 from INTERPRO model Back     alignment and domain information
>COG0714 MoxR-like ATPases [General function prediction only] Back     alignment and domain information
>KOG1808|consensus Back     alignment and domain information
>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0733|consensus Back     alignment and domain information
>KOG0736|consensus Back     alignment and domain information
>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional Back     alignment and domain information
>KOG0730|consensus Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>PF05496 RuvB_N: Holliday junction DNA helicase ruvB N-terminus; InterPro: IPR008824 The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair Back     alignment and domain information
>KOG1808|consensus Back     alignment and domain information
>PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed Back     alignment and domain information
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00350 MCM minichromosome maintenance proteins Back     alignment and domain information
>TIGR00763 lon ATP-dependent protease La Back     alignment and domain information
>PRK13531 regulatory ATPase RavA; Provisional Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism] Back     alignment and domain information
>CHL00195 ycf46 Ycf46; Provisional Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>TIGR00635 ruvB Holliday junction DNA helicase, RuvB subunit Back     alignment and domain information
>TIGR02974 phageshock_pspF psp operon transcriptional activator PspF Back     alignment and domain information
>PRK13407 bchI magnesium chelatase subunit I; Provisional Back     alignment and domain information
>PF01078 Mg_chelatase: Magnesium chelatase, subunit ChlI; InterPro: IPR000523 Magnesium-chelatase is a three-component enzyme that catalyses the insertion of Mg2+ into protoporphyrin IX Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>PRK11608 pspF phage shock protein operon transcriptional activator; Provisional Back     alignment and domain information
>KOG0735|consensus Back     alignment and domain information
>KOG0738|consensus Back     alignment and domain information
>TIGR01241 FtsH_fam ATP-dependent metalloprotease FtsH Back     alignment and domain information
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional Back     alignment and domain information
>PRK03992 proteasome-activating nucleotidase; Provisional Back     alignment and domain information
>PRK10787 DNA-binding ATP-dependent protease La; Provisional Back     alignment and domain information
>KOG0730|consensus Back     alignment and domain information
>PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor Back     alignment and domain information
>KOG2004|consensus Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>TIGR02902 spore_lonB ATP-dependent protease LonB Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>TIGR02030 BchI-ChlI magnesium chelatase ATPase subunit I Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK04195 replication factor C large subunit; Provisional Back     alignment and domain information
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR01817 nifA Nif-specific regulatory protein Back     alignment and domain information
>TIGR03689 pup_AAA proteasome ATPase Back     alignment and domain information
>CHL00206 ycf2 Ycf2; Provisional Back     alignment and domain information
>TIGR02881 spore_V_K stage V sporulation protein K Back     alignment and domain information
>TIGR00382 clpX endopeptidase Clp ATP-binding regulatory subunit (clpX) Back     alignment and domain information
>TIGR00368 Mg chelatase-related protein Back     alignment and domain information
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX Back     alignment and domain information
>KOG0737|consensus Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>CHL00181 cbbX CbbX; Provisional Back     alignment and domain information
>CHL00176 ftsH cell division protein; Validated Back     alignment and domain information
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional Back     alignment and domain information
>KOG0734|consensus Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional Back     alignment and domain information
>CHL00081 chlI Mg-protoporyphyrin IX chelatase Back     alignment and domain information
>PRK07003 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>TIGR00362 DnaA chromosomal replication initiator protein DnaA Back     alignment and domain information
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>TIGR02442 Cob-chelat-sub cobaltochelatase subunit Back     alignment and domain information
>TIGR02031 BchD-ChlD magnesium chelatase ATPase subunit D Back     alignment and domain information
>KOG0741|consensus Back     alignment and domain information
>COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional Back     alignment and domain information
>PTZ00111 DNA replication licensing factor MCM4; Provisional Back     alignment and domain information
>PLN00020 ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>PRK14960 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07994 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK14958 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>KOG0482|consensus Back     alignment and domain information
>KOG0736|consensus Back     alignment and domain information
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] Back     alignment and domain information
>PRK10733 hflB ATP-dependent metalloprotease; Reviewed Back     alignment and domain information
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional Back     alignment and domain information
>TIGR01242 26Sp45 26S proteasome subunit P45 family Back     alignment and domain information
>PRK14963 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14957 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG1221 PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PRK12422 chromosomal replication initiation protein; Provisional Back     alignment and domain information
>KOG0478|consensus Back     alignment and domain information
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional Back     alignment and domain information
>PF14532 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 3CO5_B 3N70_H Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>PRK14969 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07940 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK14951 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK15429 formate hydrogenlyase transcriptional activator FhlA; Provisional Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>PRK14949 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05896 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK09862 putative ATP-dependent protease; Provisional Back     alignment and domain information
>TIGR02915 PEP_resp_reg putative PEP-CTERM system response regulator Back     alignment and domain information
>TIGR02397 dnaX_nterm DNA polymerase III, subunit gamma and tau Back     alignment and domain information
>PRK07133 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14959 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>PRK08691 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>PRK05563 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed Back     alignment and domain information
>KOG0743|consensus Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>KOG0731|consensus Back     alignment and domain information
>KOG0744|consensus Back     alignment and domain information
>PRK14965 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK08451 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>PRK14948 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0733|consensus Back     alignment and domain information
>PRK11361 acetoacetate metabolism regulatory protein AtoC; Provisional Back     alignment and domain information
>PRK15115 response regulator GlrR; Provisional Back     alignment and domain information
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PRK14952 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK13406 bchD magnesium chelatase subunit D; Provisional Back     alignment and domain information
>KOG0739|consensus Back     alignment and domain information
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family Back     alignment and domain information
>PRK07764 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>KOG0727|consensus Back     alignment and domain information
>PRK14970 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14953 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0606 Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00678 holB DNA polymerase III, delta' subunit Back     alignment and domain information
>PRK14955 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>smart00763 AAA_PrkA PrkA AAA domain Back     alignment and domain information
>TIGR01818 ntrC nitrogen regulation protein NR(I) Back     alignment and domain information
>KOG0989|consensus Back     alignment and domain information
>PRK06647 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK06305 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK04132 replication factor C small subunit; Provisional Back     alignment and domain information
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK09111 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] Back     alignment and domain information
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] Back     alignment and domain information
>PF00493 MCM: MCM2/3/5 family This family extends the MCM domain of Prosite Back     alignment and domain information
>KOG0740|consensus Back     alignment and domain information
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14954 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10365 transcriptional regulatory protein ZraR; Provisional Back     alignment and domain information
>COG3604 FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK14971 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF13173 AAA_14: AAA domain Back     alignment and domain information
>TIGR00764 lon_rel lon-related putative ATP-dependent protease Back     alignment and domain information
>KOG0480|consensus Back     alignment and domain information
>KOG0745|consensus Back     alignment and domain information
>PRK05707 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG2028|consensus Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0991|consensus Back     alignment and domain information
>PRK09112 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG0742|consensus Back     alignment and domain information
>KOG0735|consensus Back     alignment and domain information
>KOG0728|consensus Back     alignment and domain information
>KOG2035|consensus Back     alignment and domain information
>KOG1969|consensus Back     alignment and domain information
>CHL00195 ycf46 Ycf46; Provisional Back     alignment and domain information
>PRK08058 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG1051|consensus Back     alignment and domain information
>KOG0726|consensus Back     alignment and domain information
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK06090 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PF03028 Dynein_heavy: Dynein heavy chain and region D6 of dynein motor; InterPro: IPR004273 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella Back     alignment and domain information
>PRK06871 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK07993 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG0729|consensus Back     alignment and domain information
>PRK05564 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG0481|consensus Back     alignment and domain information
>PRK08769 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR02688 conserved hypothetical protein TIGR02688 Back     alignment and domain information
>PRK13765 ATP-dependent protease Lon; Provisional Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>PRK08181 transposase; Validated Back     alignment and domain information
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function Back     alignment and domain information
>PRK08118 topology modulation protein; Reviewed Back     alignment and domain information
>PRK07471 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK08699 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>TIGR00390 hslU ATP-dependent protease HslVU, ATPase subunit Back     alignment and domain information
>PRK06964 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PF13177 DNA_pol3_delta2: DNA polymerase III, delta subunit; PDB: 1NJF_B 3GLG_G 1XXH_I 1NJG_A 3GLF_B 3GLI_G 1IQP_E 2GNO_A 1SXJ_E 1A5T_A Back     alignment and domain information
>PF03969 AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 ATPase family gene 1 (AFG1) ATPase is a 377 amino acid putative protein with an ATPase motif typical of the protein family including SEC18p PAS1, CDC48-VCP and TBP Back     alignment and domain information
>PRK05201 hslU ATP-dependent protease ATP-binding subunit HslU; Provisional Back     alignment and domain information
>PRK09183 transposase/IS protein; Provisional Back     alignment and domain information
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A Back     alignment and domain information
>PRK06921 hypothetical protein; Provisional Back     alignment and domain information
>COG3283 TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism] Back     alignment and domain information
>KOG0477|consensus Back     alignment and domain information
>PRK06526 transposase; Provisional Back     alignment and domain information
>PF05970 PIF1: PIF1-like helicase; InterPro: IPR010285 This entry represents PIF1 helicase and related proteins Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>PRK06835 DNA replication protein DnaC; Validated Back     alignment and domain information
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases Back     alignment and domain information
>PHA02774 E1; Provisional Back     alignment and domain information
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>PRK07399 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PF13245 AAA_19: Part of AAA domain Back     alignment and domain information
>KOG0652|consensus Back     alignment and domain information
>PRK10536 hypothetical protein; Provisional Back     alignment and domain information
>PF06068 TIP49: TIP49 C-terminus; InterPro: IPR010339 This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins Back     alignment and domain information
>PF05729 NACHT: NACHT domain Back     alignment and domain information
>KOG2170|consensus Back     alignment and domain information
>cd01120 RecA-like_NTPases RecA-like NTPases Back     alignment and domain information
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif Back     alignment and domain information
>KOG0651|consensus Back     alignment and domain information
>PF03215 Rad17: Rad17 cell cycle checkpoint protein Back     alignment and domain information
>PF13604 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL_A 3E1S_A 3GP8_A Back     alignment and domain information
>TIGR00150 HI0065_YjeE ATPase, YjeE family Back     alignment and domain information
>PRK00131 aroK shikimate kinase; Reviewed Back     alignment and domain information
>PRK05917 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK08939 primosomal protein DnaI; Reviewed Back     alignment and domain information
>COG1220 HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B Back     alignment and domain information
>COG4650 RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PHA01747 putative ATP-dependent protease Back     alignment and domain information
>PRK04040 adenylate kinase; Provisional Back     alignment and domain information
>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor Back     alignment and domain information
>PRK13947 shikimate kinase; Provisional Back     alignment and domain information
>KOG3347|consensus Back     alignment and domain information
>COG1485 Predicted ATPase [General function prediction only] Back     alignment and domain information
>PF03029 ATP_bind_1: Conserved hypothetical ATP binding protein; InterPro: IPR004130 Members of this family are found in a range of archaea and eukaryotes and have hypothesised ATP binding activity Back     alignment and domain information
>PHA00729 NTP-binding motif containing protein Back     alignment and domain information
>KOG0732|consensus Back     alignment and domain information
>TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family Back     alignment and domain information
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants Back     alignment and domain information
>KOG1970|consensus Back     alignment and domain information
>PRK05800 cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated Back     alignment and domain information
>TIGR00602 rad24 checkpoint protein rad24 Back     alignment and domain information
>PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop Back     alignment and domain information
>PRK03839 putative kinase; Provisional Back     alignment and domain information
>PRK00625 shikimate kinase; Provisional Back     alignment and domain information
>KOG0741|consensus Back     alignment and domain information
>PF13086 AAA_11: AAA domain; PDB: 2XZL_A 2XZO_A 2WJY_A 2WJV_A 2XZP_A 2GK6_A 2GK7_A 2GJK_A Back     alignment and domain information
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal Back     alignment and domain information
>KOG0990|consensus Back     alignment and domain information
>PRK06217 hypothetical protein; Validated Back     alignment and domain information
>PRK13949 shikimate kinase; Provisional Back     alignment and domain information
>KOG1533|consensus Back     alignment and domain information
>PRK06762 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family Back     alignment and domain information
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars Back     alignment and domain information
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB Back     alignment and domain information
>PRK13946 shikimate kinase; Provisional Back     alignment and domain information
>PRK06696 uridine kinase; Validated Back     alignment and domain information
>PRK14530 adenylate kinase; Provisional Back     alignment and domain information
>cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases Back     alignment and domain information
>KOG0479|consensus Back     alignment and domain information
>cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) Back     alignment and domain information
>PRK14532 adenylate kinase; Provisional Back     alignment and domain information
>TIGR03499 FlhF flagellar biosynthetic protein FlhF Back     alignment and domain information
>PRK13833 conjugal transfer protein TrbB; Provisional Back     alignment and domain information
>PF01443 Viral_helicase1: Viral (Superfamily 1) RNA helicase; InterPro: IPR000606 This entry includes RNA and DNA helicases Back     alignment and domain information
>TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily Back     alignment and domain information
>cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate Back     alignment and domain information
>PF01745 IPT: Isopentenyl transferase; InterPro: IPR002648 Isopentenyl transferase / dimethylallyl transferase synthesizes isopentenyladensosine 5'-monophosphate, a cytokinin that induces shoot formation on host plants infected with the Ti plasmid [] Back     alignment and domain information
>PRK03731 aroL shikimate kinase II; Reviewed Back     alignment and domain information
>PRK05057 aroK shikimate kinase I; Reviewed Back     alignment and domain information
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A Back     alignment and domain information
>PF13521 AAA_28: AAA domain; PDB: 1LW7_A Back     alignment and domain information
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes Back     alignment and domain information
>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14531 adenylate kinase; Provisional Back     alignment and domain information
>PRK14722 flhF flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>cd01428 ADK Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP) Back     alignment and domain information
>PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C Back     alignment and domain information
>PRK07132 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK06547 hypothetical protein; Provisional Back     alignment and domain information
>PRK00023 cmk cytidylate kinase; Provisional Back     alignment and domain information
>PRK04182 cytidylate kinase; Provisional Back     alignment and domain information
>PRK10078 ribose 1,5-bisphosphokinase; Provisional Back     alignment and domain information
>PF00406 ADK: Adenylate kinase; InterPro: IPR000850 Adenylate kinases (ADK) are phosphotransferases that catalyse the reversible reaction AMP + MgATP = ADP + MgADP an essential reaction for many processes in living cells Back     alignment and domain information
>TIGR02173 cyt_kin_arch cytidylate kinase, putative Back     alignment and domain information
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) Back     alignment and domain information
>COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK02496 adk adenylate kinase; Provisional Back     alignment and domain information
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ] Back     alignment and domain information
>PRK10646 ADP-binding protein; Provisional Back     alignment and domain information
>PRK08233 hypothetical protein; Provisional Back     alignment and domain information
>PF05272 VirE: Virulence-associated protein E; InterPro: IPR007936 This family contains several bacterial virulence-associated protein E like proteins Back     alignment and domain information
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>PRK05480 uridine/cytidine kinase; Provisional Back     alignment and domain information
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins Back     alignment and domain information
>PTZ00088 adenylate kinase 1; Provisional Back     alignment and domain information
>PRK14528 adenylate kinase; Provisional Back     alignment and domain information
>TIGR02768 TraA_Ti Ti-type conjugative transfer relaxase TraA Back     alignment and domain information
>TIGR01351 adk adenylate kinases Back     alignment and domain information
>cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B Back     alignment and domain information
>PRK04296 thymidine kinase; Provisional Back     alignment and domain information
>PRK06851 hypothetical protein; Provisional Back     alignment and domain information
>PRK13900 type IV secretion system ATPase VirB11; Provisional Back     alignment and domain information
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK13851 type IV secretion system protein VirB11; Provisional Back     alignment and domain information
>PRK13948 shikimate kinase; Provisional Back     alignment and domain information
>PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed Back     alignment and domain information
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated Back     alignment and domain information
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ Back     alignment and domain information
>PRK00279 adk adenylate kinase; Reviewed Back     alignment and domain information
>TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Back     alignment and domain information
>PLN02200 adenylate kinase family protein Back     alignment and domain information
>cd01128 rho_factor Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase Back     alignment and domain information
>PRK07667 uridine kinase; Provisional Back     alignment and domain information
>COG0283 Cmk Cytidylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>COG0802 Predicted ATPase or kinase [General function prediction only] Back     alignment and domain information
>PRK05818 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK13894 conjugal transfer ATPase TrbB; Provisional Back     alignment and domain information
>TIGR01618 phage_P_loop phage nucleotide-binding protein Back     alignment and domain information
>KOG1514|consensus Back     alignment and domain information
>TIGR00064 ftsY signal recognition particle-docking protein FtsY Back     alignment and domain information
>COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] Back     alignment and domain information
>TIGR01425 SRP54_euk signal recognition particle protein SRP54 Back     alignment and domain information
>PF06431 Polyoma_lg_T_C: Polyomavirus large T antigen C-terminus; InterPro: IPR010932 The group of polyomaviruses is formed by the homonymous murine virus (Py) as well as other representative members such as the simian virus 40 (SV40) and the human BK and JC viruses [] Back     alignment and domain information
>PF07931 CPT: Chloramphenicol phosphotransferase-like protein; InterPro: IPR012853 The members of this family are all similar to chloramphenicol 3-O phosphotransferase (CPT, Q56148 from SWISSPROT) expressed by Streptomyces venezuelae Back     alignment and domain information
>TIGR02237 recomb_radB DNA repair and recombination protein RadB Back     alignment and domain information
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion] Back     alignment and domain information
>PRK11545 gntK gluconate kinase 1; Provisional Back     alignment and domain information
>KOG2543|consensus Back     alignment and domain information
>PRK13889 conjugal transfer relaxase TraA; Provisional Back     alignment and domain information
>TIGR00376 DNA helicase, putative Back     alignment and domain information
>PF13479 AAA_24: AAA domain Back     alignment and domain information
>PRK09361 radB DNA repair and recombination protein RadB; Provisional Back     alignment and domain information
>cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway Back     alignment and domain information
>PRK14737 gmk guanylate kinase; Provisional Back     alignment and domain information
>TIGR00767 rho transcription termination factor Rho Back     alignment and domain information
>PF14516 AAA_35: AAA-like domain Back     alignment and domain information
>TIGR01613 primase_Cterm phage/plasmid primase, P4 family, C-terminal domain Back     alignment and domain information
>PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 Back     alignment and domain information
>cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor Back     alignment and domain information
>PF02562 PhoH: PhoH-like protein; InterPro: IPR003714 PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation and belongings to the phosphate regulon (pho) in Escherichia coli [] Back     alignment and domain information
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs Back     alignment and domain information
>PRK06851 hypothetical protein; Provisional Back     alignment and domain information
>PRK01184 hypothetical protein; Provisional Back     alignment and domain information
>KOG1942|consensus Back     alignment and domain information
>PRK13768 GTPase; Provisional Back     alignment and domain information
>PF06048 DUF927: Domain of unknown function (DUF927); InterPro: IPR009270 This entry is represented by Bacteriophage PT1028, Orf1 Back     alignment and domain information
>PF06745 KaiC: KaiC; InterPro: IPR014774 This entry represents a domain within bacterial and archaeal proteins, most of which are hypothetical Back     alignment and domain information
>PRK10416 signal recognition particle-docking protein FtsY; Provisional Back     alignment and domain information
>PRK14527 adenylate kinase; Provisional Back     alignment and domain information
>cd00544 CobU Adenosylcobinamide kinase / adenosylcobinamide phosphate guanyltransferase (CobU) Back     alignment and domain information
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional Back     alignment and domain information
>TIGR01448 recD_rel helicase, putative, RecD/TraA family Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>PLN02165 adenylate isopentenyltransferase Back     alignment and domain information
>PRK00889 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PRK00300 gmk guanylate kinase; Provisional Back     alignment and domain information
>PRK00771 signal recognition particle protein Srp54; Provisional Back     alignment and domain information
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type Back     alignment and domain information
>PRK14526 adenylate kinase; Provisional Back     alignment and domain information
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed Back     alignment and domain information
>PRK14237 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PF13337 Lon_2: Putative ATP-dependent Lon protease Back     alignment and domain information
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response Back     alignment and domain information
>PRK14974 cell division protein FtsY; Provisional Back     alignment and domain information
>cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 Back     alignment and domain information
>cd03114 ArgK-like The function of this protein family is unkown Back     alignment and domain information
>TIGR00017 cmk cytidylate kinase Back     alignment and domain information
>PRK15455 PrkA family serine protein kinase; Provisional Back     alignment and domain information
>PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] Back     alignment and domain information
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>PRK13975 thymidylate kinase; Provisional Back     alignment and domain information
>PLN02199 shikimate kinase Back     alignment and domain information
>PRK10867 signal recognition particle protein; Provisional Back     alignment and domain information
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional Back     alignment and domain information
>PTZ00301 uridine kinase; Provisional Back     alignment and domain information
>TIGR00041 DTMP_kinase thymidylate kinase Back     alignment and domain information
>TIGR03263 guanyl_kin guanylate kinase Back     alignment and domain information
>COG2607 Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information
>PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 Back     alignment and domain information
>PRK15453 phosphoribulokinase; Provisional Back     alignment and domain information
>TIGR00235 udk uridine kinase Back     alignment and domain information
>PRK05541 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) Back     alignment and domain information
>PHA02530 pseT polynucleotide kinase; Provisional Back     alignment and domain information
>PRK07276 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth Back     alignment and domain information
>PRK13973 thymidylate kinase; Provisional Back     alignment and domain information
>PRK04301 radA DNA repair and recombination protein RadA; Validated Back     alignment and domain information
>PRK14529 adenylate kinase; Provisional Back     alignment and domain information
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>KOG1803|consensus Back     alignment and domain information
>TIGR00174 miaA tRNA isopentenyltransferase (miaA) Back     alignment and domain information
>PLN02674 adenylate kinase Back     alignment and domain information
>TIGR00959 ffh signal recognition particle protein Back     alignment and domain information
>PF13555 AAA_29: P-loop containing region of AAA domain Back     alignment and domain information
>PRK13826 Dtr system oriT relaxase; Provisional Back     alignment and domain information
>TIGR02236 recomb_radA DNA repair and recombination protein RadA Back     alignment and domain information
>PRK12339 2-phosphoglycerate kinase; Provisional Back     alignment and domain information
>PRK12608 transcription termination factor Rho; Provisional Back     alignment and domain information
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids Back     alignment and domain information
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) Back     alignment and domain information
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated Back     alignment and domain information
>PF10443 RNA12: RNA12 protein; InterPro: IPR018850 Mitochondrial escape protein 2 (also known as RNA12) plays a role in maintaining the mitochondrial genome and in controlling mtDNA escape [, ] Back     alignment and domain information
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 Back     alignment and domain information
>TIGR00455 apsK adenylylsulfate kinase (apsK) Back     alignment and domain information
>PRK04220 2-phosphoglycerate kinase; Provisional Back     alignment and domain information
>cd01394 radB RadB Back     alignment and domain information
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02459 probable adenylate kinase Back     alignment and domain information
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51 Back     alignment and domain information
>TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB Back     alignment and domain information
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins Back     alignment and domain information
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase Back     alignment and domain information
>PRK09825 idnK D-gluconate kinase; Provisional Back     alignment and domain information
>PRK14730 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>COG3854 SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>TIGR00750 lao LAO/AO transport system ATPase Back     alignment and domain information
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06761 hypothetical protein; Provisional Back     alignment and domain information
>PLN02840 tRNA dimethylallyltransferase Back     alignment and domain information
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>KOG3354|consensus Back     alignment and domain information
>PF08303 tRNA_lig_kinase: tRNA ligase kinase domain; InterPro: IPR015966 This entry represents a kinase domain found in fungal tRNA ligases [] Back     alignment and domain information
>PRK09376 rho transcription termination factor Rho; Provisional Back     alignment and domain information
>KOG0727|consensus Back     alignment and domain information
>PRK11860 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; Provisional Back     alignment and domain information
>PRK09435 membrane ATPase/protein kinase; Provisional Back     alignment and domain information
>cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis Back     alignment and domain information
>PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 Back     alignment and domain information
>PRK12338 hypothetical protein; Provisional Back     alignment and domain information
>PRK09518 bifunctional cytidylate kinase/GTPase Der; Reviewed Back     alignment and domain information
>PRK08356 hypothetical protein; Provisional Back     alignment and domain information
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>PRK05973 replicative DNA helicase; Provisional Back     alignment and domain information
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05439 pantothenate kinase; Provisional Back     alignment and domain information
>PRK10436 hypothetical protein; Provisional Back     alignment and domain information
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK03846 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PRK14738 gmk guanylate kinase; Provisional Back     alignment and domain information
>PRK13764 ATPase; Provisional Back     alignment and domain information
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2 Back     alignment and domain information
>PF08477 Miro: Miro-like protein; InterPro: IPR013684 Mitochondrial Rho proteins (Miro-1, Q8IXI2 from SWISSPROT and Miro-2, Q8IXI1 from SWISSPROT) are atypical Rho GTPases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
3vkg_A 3245 X-Ray Structure Of An Mtbd Truncation Mutant Of Dyn 4e-82
3vkh_A 3367 X-Ray Structure Of A Functional Full-Length Dynein 4e-82
3qmz_A 2486 Crystal Structure Of The Cytoplasmic Dynein Heavy C 4e-50
4ai6_A 2695 Dynein Motor Domain - Adp Complex Length = 2695 4e-50
>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain Length = 3245 Back     alignment and structure 
Iteration: 1

 Score =  301 bits (771), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 162/388 (41%), Positives = 220/388 (56%), Gaps = 25/388 (6%)
Query: 18  ECRMNIKSVNDFEWLKQCRFYF----KDDLDKTWINITDVTFTYQNEYLGCTERLVITPL 73
           +C+ N+    DF+WL   R+Y+    ++ L K  I++ + TF Y  EYLG  ERLV TPL
Sbjct: 531 KCK-NLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPL 589
Query: 74  TDRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRI 133
           TDRCY+TL QAL   MGG+P GPAGTGKTETVK +G  L ++V+VF C +  D + + RI
Sbjct: 590 TDRCYLTLTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRI 649
Query: 134 YKGLAQSGSWGCFDEFNRIELPXXXXXXXXXXXXXXXXXXXXXXFVFTDGDSIEMCPEFG 193
           + GL Q G+WGCFDEFNR+E                             G +I +  + G
Sbjct: 650 FVGLCQCGAWGCFDEFNRLEERILSAVSQQIQTIQVALKENSKEVELLGGKNISLHQDMG 709
Query: 194 IFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLY 253
           IF+TMNPGYAGR  LP+NLK  FR++AM+ PDR++I +V L S GF     LA K   L+
Sbjct: 710 IFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFKTAEVLAGKIVPLF 769
Query: 254 KLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNS-------RDTEST------------ 294
           KLC+EQL+ Q HYDFGLR + SVL S G  KR           D ES             
Sbjct: 770 KLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPQLPPITDAESKTKADQIYCQYEI 829
Query: 295 -IVMRVLRDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFH 353
            +++  + D  + KL+ +D PL  SL+ D+FP   L+      L   IQE  +   L+  
Sbjct: 830 GVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGSQLQPIQMDQLRKKIQEIAKQRHLVTK 889
Query: 354 PPWVLKLIQLYETQRVRHGIMTLGPTGA 381
             WV K++QL++   + HG+M +GP+G 
Sbjct: 890 QEWVEKILQLHQILNINHGVMMVGPSGG 917
>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor Domain Length = 3367 Back     alignment and structure
>pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain Motor Domain Length = 2486 Back     alignment and structure
>pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex Length = 2695 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
4akg_A 2695 Glutathione S-transferase class-MU 26 kDa isozyme 0.0
4akg_A 2695 Glutathione S-transferase class-MU 26 kDa isozyme 7e-21
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 0.0
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 Back     alignment and structure
 Score =  610 bits (1574), Expect = 0.0
 Identities = 120/367 (32%), Positives = 180/367 (49%), Gaps = 8/367 (2%)

Query: 19  CRMNIKSVNDFEWLKQCRFYFKDD----LDKTWINITDVTFTYQNEYLGCTERLVITPLT 74
              + K      W K  +FY K+D    L+  +I+ +     Y+ EY+G  ERL+ TPL 
Sbjct: 572 KNCSTKEEARLLWAKVQKFYQKNDTLDDLNSVFISQSGYLLQYKFEYIGIPERLIYTPLL 631

Query: 75  DRCYITLAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIY 134
              + TL  +L    GG   GPAGTGKTETVK  G+ L + VVVFNC D  DY+ L R+ 
Sbjct: 632 LIGFATLTDSLHQKYGGCFFGPAGTGKTETVKAFGQNLGRVVVVFNCDDSFDYQVLSRLL 691

Query: 135 KGLAQSGSWGCFDEFNRIELPVLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGI 194
            G+ Q G+WGCFDEFNR++  VLS  +  +  +    +  K        +   + P   +
Sbjct: 692 VGITQIGAWGCFDEFNRLDEKVLSAVSANIQQIQNGLQVGKSHITL-LEEETPLSPHTAV 750

Query: 195 FITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFLENITLARKFYTLYK 254
           FIT+NPGY GR ELPENLK  FR  +M  P    I  + L   GF ++ +LA K     +
Sbjct: 751 FITLNPGYNGRSELPENLKKSFREFSMKSPQSGTIAEMILQIMGFEDSKSLASKIVHFLE 810

Query: 255 LCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVNSRDTESTIVMRVLRDMNLSKLIDEDEP 314
           L   + +   HY FGLR +  VLR+                V+  L+ + L  L D DE 
Sbjct: 811 LLSSKCSSMNHYHFGLRTLKGVLRNCSPLISEFG--EGEKTVVESLKRVILPSLGDTDEL 868

Query: 315 LFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIM 374
           +F   ++ +F +         A+   +++  + +G      ++ K +Q Y  Q+ +  ++
Sbjct: 869 VFKDELSKIFDSAGTPL-NSKAIVQCLKDAGQRSGFSMSEEFLKKCMQFYYMQKTQQALI 927

Query: 375 TLGPTGA 381
            +G  G 
Sbjct: 928 LVGKAGC 934
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 100.0
4akg_A 2695 Glutathione S-transferase class-MU 26 kDa isozyme 100.0
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 100.0
4akg_A 2695 Glutathione S-transferase class-MU 26 kDa isozyme 99.98
2r44_A331 Uncharacterized protein; putative ATPase, structur 99.66
3cf2_A 806 TER ATPase, transitional endoplasmic reticulum ATP 99.33
1g8p_A350 Magnesium-chelatase 38 kDa subunit; parallel beta 99.19
1ofh_A310 ATP-dependent HSL protease ATP-binding subunit HSL 99.16
3nbx_X 500 ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structu 99.16
3pfi_A338 Holliday junction ATP-dependent DNA helicase RUVB; 99.15
3f9v_A595 Minichromosome maintenance protein MCM; replicativ 99.15
4b4t_J405 26S protease regulatory subunit 8 homolog; hydrola 99.15
1r6b_X 758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 99.14
1hqc_A324 RUVB; extended AAA-ATPase domain, complex with nuc 99.13
2bjv_A265 PSP operon transcriptional activator; AAA, transcr 99.12
4fcw_A311 Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 99.12
4b4t_K428 26S protease regulatory subunit 6B homolog; hydrol 99.11
3pxi_A758 Negative regulator of genetic competence CLPC/MEC; 99.08
4b4t_H467 26S protease regulatory subunit 7 homolog; hydrola 99.08
3n70_A145 Transport activator; sigma-54, ntpase, PSI, MCSG, 99.08
1xwi_A322 SKD1 protein; VPS4B, AAA ATPase, protein transport 99.07
1r6b_X758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 99.06
3m6a_A 543 ATP-dependent protease LA 1; alpha, beta, ATP-bind 99.05
2chg_A226 Replication factor C small subunit; DNA-binding pr 99.05
4b4t_M434 26S protease regulatory subunit 6A; hydrolase, AAA 99.04
4b4t_I437 26S protease regulatory subunit 4 homolog; hydrola 99.04
4b4t_L437 26S protease subunit RPT4; hydrolase, AAA-atpases, 99.04
2qp9_X355 Vacuolar protein sorting-associated protein 4; ATP 99.03
1qvr_A 854 CLPB protein; coiled coil, AAA ATPase, chaperone; 99.02
3pxi_A 758 Negative regulator of genetic competence CLPC/MEC; 99.0
3eie_A322 Vacuolar protein sorting-associated protein 4; AAA 99.0
3f8t_A506 Predicted ATPase involved in replication control, 99.0
3syl_A309 Protein CBBX; photosynthesis, rubisco activase, AA 99.0
3u61_B324 DNA polymerase accessory protein 44; AAA+, ATP hyd 98.98
3co5_A143 Putative two-component system transcriptional RES 98.98
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 98.98
3vfd_A389 Spastin; ATPase, microtubule severing, hydrolase; 98.97
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 98.97
3d8b_A357 Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s 98.95
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 98.93
3hws_A363 ATP-dependent CLP protease ATP-binding subunit CL; 98.92
1um8_A376 ATP-dependent CLP protease ATP-binding subunit CL; 98.89
1ojl_A304 Transcriptional regulatory protein ZRAR; response 98.89
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 98.85
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 98.85
2zan_A444 Vacuolar protein sorting-associating protein 4B; S 98.85
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 98.82
1sxj_D353 Activator 1 41 kDa subunit; clamp loader, processi 98.81
1sxj_B323 Activator 1 37 kDa subunit; clamp loader, processi 98.8
3pvs_A 447 Replication-associated recombination protein A; ma 98.79
1njg_A250 DNA polymerase III subunit gamma; rossman-like fol 98.78
3bos_A242 Putative DNA replication factor; P-loop containing 98.78
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 98.78
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 98.77
1iqp_A327 RFCS; clamp loader, extended AAA-ATPase domain, co 98.75
2qby_B384 CDC6 homolog 3, cell division control protein 6 ho 98.75
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 98.74
1l8q_A324 Chromosomal replication initiator protein DNAA; AA 98.72
2chq_A319 Replication factor C small subunit; DNA-binding pr 98.71
3te6_A318 Regulatory protein SIR3; heterochromatin, gene sil 98.7
1qvr_A854 CLPB protein; coiled coil, AAA ATPase, chaperone; 98.7
2z4s_A440 Chromosomal replication initiator protein DNAA; AA 98.69
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 98.68
3hu3_A489 Transitional endoplasmic reticulum ATPase; VCP, tr 98.66
1sxj_A 516 Activator 1 95 kDa subunit; clamp loader, processi 98.65
2ce7_A 476 Cell division protein FTSH; metalloprotease; HET: 98.65
2r62_A268 Cell division protease FTSH homolog; ATPase domain 98.65
2v1u_A387 Cell division control protein 6 homolog; DNA repli 98.62
3cf2_A806 TER ATPase, transitional endoplasmic reticulum ATP 98.6
1a5t_A334 Delta prime, HOLB; zinc finger, DNA replication; 2 98.58
2x8a_A274 Nuclear valosin-containing protein-like; nuclear p 98.57
1jr3_A373 DNA polymerase III subunit gamma; processivity, pr 98.55
1sxj_C340 Activator 1 40 kDa subunit; clamp loader, processi 98.55
1ny5_A387 Transcriptional regulator (NTRC family); AAA+ ATPa 98.51
1in4_A334 RUVB, holliday junction DNA helicase RUVB; AAA+-cl 98.5
3pxg_A468 Negative regulator of genetic competence CLPC/MEC; 98.44
2dhr_A 499 FTSH; AAA+ protein, hexameric Zn metalloprotease, 98.43
3dzd_A368 Transcriptional regulator (NTRC family); sigma43 a 98.42
3k1j_A 604 LON protease, ATP-dependent protease LON; ATP-bind 98.42
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 98.41
1fnn_A389 CDC6P, cell division control protein 6; ORC1, AAA 98.36
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 98.35
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 98.31
2kjq_A149 DNAA-related protein; solution structure, NESG, st 98.25
1ypw_A 806 Transitional endoplasmic reticulum ATPase; AAA, P9 98.22
1sxj_E354 Activator 1 40 kDa subunit; clamp loader, processi 98.19
2gno_A305 DNA polymerase III, gamma subunit-related protein; 98.18
2qby_A386 CDC6 homolog 1, cell division control protein 6 ho 98.13
1tue_A212 Replication protein E1; helicase, replication, E1E 98.03
1g41_A444 Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dep 97.85
2c9o_A456 RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- 97.81
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 97.73
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 97.71
2qgz_A308 Helicase loader, putative primosome component; str 97.06
2qen_A350 Walker-type ATPase; unknown function; HET: ADP; 2. 96.96
1w5s_A412 Origin recognition complex subunit 2 ORC2; replica 96.91
2fna_A357 Conserved hypothetical protein; structural genomic 96.73
1u0j_A267 DNA replication protein; AAA+ protein, P-loop atpa 96.72
2orw_A184 Thymidine kinase; TMTK, TP4A, transferase; HET: 4T 96.51
3upu_A 459 ATP-dependent DNA helicase DDA; RECA-like domain, 96.47
2vhj_A331 Ntpase P4, P4; non- hydrolysable ATP analogue, hyd 96.45
1kag_A173 SKI, shikimate kinase I; transferase, structural g 96.38
1qhx_A178 CPT, protein (chloramphenicol phosphotransferase); 96.37
3vaa_A199 Shikimate kinase, SK; structural genomics, center 96.35
3trf_A185 Shikimate kinase, SK; amino acid biosynthesis, tra 96.18
4eun_A200 Thermoresistant glucokinase; putative sugar kinase 96.09
2r2a_A199 Uncharacterized protein; zonular occludens toxin, 96.07
3kb2_A173 SPBC2 prophage-derived uncharacterized protein YOR 95.98
1via_A175 Shikimate kinase; structural genomics, transferase 95.92
2iyv_A184 Shikimate kinase, SK; transferase, aromatic amino 95.87
3cm0_A186 Adenylate kinase; ATP-binding, cytoplasm, nucleoti 95.82
1zuh_A168 Shikimate kinase; alpha-beta protein, transferase; 95.8
2c95_A196 Adenylate kinase 1; transferase, AP4A, nucleotide 95.78
1e6c_A173 Shikimate kinase; phosphoryl transfer, ADP, shikim 95.77
3iij_A180 Coilin-interacting nuclear ATPase protein; alpha a 95.72
2bwj_A199 Adenylate kinase 5; phosphoryl transfer reaction, 95.65
1zd8_A227 GTP:AMP phosphotransferase mitochondrial; ATP:AMP 95.61
2vli_A183 Antibiotic resistance protein; transferase, tunica 95.54
2ze6_A253 Isopentenyl transferase; crown GALL tumor, cytokin 95.54
2rhm_A193 Putative kinase; P-loop containing nucleoside trip 95.53
2cdn_A201 Adenylate kinase; phosphoryl transfer, associative 95.47
3t61_A202 Gluconokinase; PSI-biology, structural genomics, p 95.47
1knq_A175 Gluconate kinase; ALFA/beta structure, transferase 95.43
3nwj_A250 ATSK2; P loop, shikimate, nucleoside monophosphate 95.37
3lw7_A179 Adenylate kinase related protein (ADKA-like); AMP, 95.36
2pt5_A168 Shikimate kinase, SK; aromatic amino acid biosynth 95.34
4b3f_X 646 DNA-binding protein smubp-2; hydrolase, helicase; 95.31
1tev_A196 UMP-CMP kinase; ploop, NMP binding region, LID reg 95.27
1kht_A192 Adenylate kinase; phosphotransferase, signaling pr 95.23
1zak_A222 Adenylate kinase; ATP:AMP-phosphotransferase, tran 95.22
3fb4_A216 Adenylate kinase; psychrophIle, phosphotransferase 95.2
1aky_A220 Adenylate kinase; ATP:AMP phosphotransferase, myok 95.19
2cvh_A220 DNA repair and recombination protein RADB; filamen 95.17
1svm_A377 Large T antigen; AAA+ fold, viral protein; HET: AT 95.17
1gvn_B287 Zeta; postsegregational killing system, plasmid; 1 95.16
3e1s_A574 Exodeoxyribonuclease V, subunit RECD; alpha and be 95.15
2jaq_A205 Deoxyguanosine kinase; transferase, deoxyribonucle 95.15
3dl0_A216 Adenylate kinase; phosphotransferase, zinc coordin 95.08
1cke_A227 CK, MSSA, protein (cytidine monophosphate kinase); 95.06
1y63_A184 LMAJ004144AAA protein; structural genomics, protei 95.06
1qf9_A194 UMP/CMP kinase, protein (uridylmonophosphate/cytid 95.03
2pez_A179 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 94.98
1ly1_A181 Polynucleotide kinase; PNK, phosphatase, transfera 94.95
3be4_A217 Adenylate kinase; malaria, cryptosporidium parvum 94.92
1zp6_A191 Hypothetical protein ATU3015; alpha-beta protein., 94.9
3zvl_A416 Bifunctional polynucleotide phosphatase/kinase; hy 94.87
3uie_A200 Adenylyl-sulfate kinase 1, chloroplastic; rossmann 94.87
4e22_A252 Cytidylate kinase; P-loop, CMP/ATP binding, transf 94.86
1ak2_A233 Adenylate kinase isoenzyme-2; nucleoside monophosp 94.86
1jjv_A206 Dephospho-COA kinase; P-loop nucleotide-binding fo 94.84
2b8t_A223 Thymidine kinase; deoxyribonucleoside kinase, zinc 94.84
1e4v_A214 Adenylate kinase; transferase(phosphotransferase); 94.83
2xb4_A223 Adenylate kinase; ATP-binding, nucleotide-binding, 94.79
3sr0_A206 Adenylate kinase; phosphoryl transfer analogue, AL 94.79
2z0h_A197 DTMP kinase, thymidylate kinase; ATP-binding, nucl 94.78
1ukz_A203 Uridylate kinase; transferase; HET: ADP AMP; 1.90A 94.78
2p5t_B253 PEZT; postsegregational killing system, phosphoryl 94.76
3ake_A208 Cytidylate kinase; CMP kinase, CMP complex, open c 94.73
2grj_A192 Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosp 94.56
3d3q_A340 TRNA delta(2)-isopentenylpyrophosphate transferase 94.54
2pbr_A195 DTMP kinase, thymidylate kinase; transferase, nucl 94.54
3a4m_A260 L-seryl-tRNA(SEC) kinase; P-loop motif, walker A m 94.54
3tlx_A243 Adenylate kinase 2; structural genomics, structura 94.51
2fz4_A237 DNA repair protein RAD25; RECA-like domain, DNA da 94.5
2if2_A204 Dephospho-COA kinase; alpha-beta protein, structur 94.43
3crm_A323 TRNA delta(2)-isopentenylpyrophosphate transferase 94.41
3r20_A233 Cytidylate kinase; structural genomics, seattle st 94.4
4hlc_A205 DTMP kinase, thymidylate kinase; TMK, MRSA, pipiri 94.39
2bbw_A246 Adenylate kinase 4, AK4; nucleotide kinase, nucleo 94.37
1nks_A194 Adenylate kinase; thermophilic, transferase; HET: 94.32
1ye8_A178 Protein THEP1, hypothetical UPF0334 kinase-like pr 94.27
1n0w_A243 DNA repair protein RAD51 homolog 1; DNA repair, ho 94.26
3umf_A217 Adenylate kinase; rossmann fold, transferase; 2.05 94.26
2v54_A204 DTMP kinase, thymidylate kinase; nucleotide biosyn 94.25
3v9p_A227 DTMP kinase, thymidylate kinase; ssgcid, STRU geno 94.21
2plr_A213 DTMP kinase, probable thymidylate kinase; TMP-bind 94.2
1jr3_D343 DNA polymerase III, delta subunit; processivity, p 94.19
1lvg_A198 Guanylate kinase, GMP kinase; transferase; HET: AD 94.17
1ex7_A186 Guanylate kinase; substrate-induced FIT, domain mo 94.17
2qor_A204 Guanylate kinase; phosphotransferase, purine metab 94.1
2ga8_A359 Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn 94.02
1kgd_A180 CASK, peripheral plasma membrane CASK; maguk, guan 94.0
3fdi_A201 Uncharacterized protein; cytidylate kinase like pr 93.96
4a74_A231 DNA repair and recombination protein RADA; hydrola 93.93
3foz_A316 TRNA delta(2)-isopentenylpyrophosphate transferas; 93.9
1vht_A218 Dephospho-COA kinase; structural genomics, transfe 93.9
3tr0_A205 Guanylate kinase, GMP kinase; purines, pyrimidines 93.86
3a8t_A339 Adenylate isopentenyltransferase; rossmann fold pr 93.7
3cmu_A 2050 Protein RECA, recombinase A; homologous recombinat 93.69
3exa_A322 TRNA delta(2)-isopentenylpyrophosphate transferase 93.67
2bdt_A189 BH3686; alpha-beta protein, structural genomics, P 93.62
1uj2_A252 Uridine-cytidine kinase 2; alpha/beta mononucleoti 93.62
2oap_1511 GSPE-2, type II secretion system protein; hexameri 93.59
1z6g_A218 Guanylate kinase; structural genomics, SGC, struct 93.5
1w36_D 608 RECD, exodeoxyribonuclease V alpha chain; recombin 93.48
1znw_A207 Guanylate kinase, GMP kinase; ATP:GMP-phosphotrans 93.46
1uf9_A203 TT1252 protein; P-loop, nucleotide binding domain, 93.45
2h92_A219 Cytidylate kinase; rossmann fold, transferase; HET 93.39
3tau_A208 Guanylate kinase, GMP kinase; structural genomics, 93.38
3c8u_A208 Fructokinase; YP_612366.1, putative fructose trans 93.35
2zr9_A349 Protein RECA, recombinase A; recombination, RECA m 93.33
3dm5_A443 SRP54, signal recognition 54 kDa protein; protein- 93.33
2z43_A324 DNA repair and recombination protein RADA; archaea 93.31
2qmh_A205 HPR kinase/phosphorylase; V267F mutation, ATP-bind 93.26
3a00_A186 Guanylate kinase, GMP kinase; domain movement, dim 93.26
1q3t_A236 Cytidylate kinase; nucleotide monophosphate kinase 93.25
2jeo_A245 Uridine-cytidine kinase 1; UCK, transferase, ATP-b 93.19
1xx6_A191 Thymidine kinase; NESG, northeast structural genom 93.06
2yvu_A186 Probable adenylyl-sulfate kinase; transferase, str 93.02
4b4t_J 405 26S protease regulatory subunit 8 homolog; hydrola 92.97
3hjn_A197 DTMP kinase, thymidylate kinase; ATP-binding, nucl 92.94
3asz_A211 Uridine kinase; cytidine phosphorylation, transfer 92.87
1xjc_A169 MOBB protein homolog; structural genomics, midwest 92.83
2j41_A207 Guanylate kinase; GMP, GMK, transferase, ATP-bindi 92.82
1c9k_A180 COBU, adenosylcobinamide kinase; alpha/beta struct 92.78
2wwf_A212 Thymidilate kinase, putative; transferase, malaria 92.72
3ney_A197 55 kDa erythrocyte membrane protein; structural ge 92.67
3gmt_A230 Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucle 92.64
1v5w_A343 DMC1, meiotic recombination protein DMC1/LIM15 hom 92.62
1s96_A219 Guanylate kinase, GMP kinase; E.coli, dimer, SAD, 92.54
1rz3_A201 Hypothetical protein rbstp0775; MCSG, structural g 92.4
1htw_A158 HI0065; nucleotide-binding fold, structural genomi 92.39
1nn5_A215 Similar to deoxythymidylate kinase (thymidylate K; 92.34
1a7j_A290 Phosphoribulokinase; transferase, calvin cycle; 2. 92.27
3hdt_A223 Putative kinase; structura genomics, PSI-2, protei 92.25
1vma_A306 Cell division protein FTSY; TM0570, structural gen 92.23
2w0m_A235 SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus 92.19
3b85_A208 Phosphate starvation-inducible protein; PHOH2, ATP 92.17
3kl4_A433 SRP54, signal recognition 54 kDa protein; signal r 92.07
1m7g_A211 Adenylylsulfate kinase; APS kinase, transferase, s 91.98
2v9p_A305 Replication protein E1; AAA+ molecular motor, DNA 91.94
2eyu_A261 Twitching motility protein PILT; pilus retraction 91.93
1pzn_A349 RAD51, DNA repair and recombination protein RAD51, 91.92
2gza_A361 Type IV secretion system protein VIRB11; ATPase, h 91.85
3kta_A182 Chromosome segregation protein SMC; structural mai 91.83
4edh_A213 DTMP kinase, thymidylate kinase; structural genomi 91.79
2qt1_A207 Nicotinamide riboside kinase 1; non-protein kinase 91.78
3eph_A 409 TRNA isopentenyltransferase; transferase, alternat 91.72
2f6r_A281 COA synthase, bifunctional coenzyme A synthase; 18 91.65
1yrb_A262 ATP(GTP)binding protein; GTPase, P-loop, rossman f 91.56
1ltq_A301 Polynucleotide kinase; phosphatase, alpha/beta, P- 91.52
2px0_A296 Flagellar biosynthesis protein FLHF; SRP GTPase, f 91.51
2i3b_A189 HCR-ntpase, human cancer-related ntpase; AAA, ross 91.36
3p32_A355 Probable GTPase RV1496/MT1543; structural genomics 91.32
2pt7_A330 CAG-ALFA; ATPase, protein-protein complex, type IV 91.31
1xp8_A366 RECA protein, recombinase A; recombination, radior 91.28
1ko7_A314 HPR kinase/phosphatase; protein kinase, phosphotra 91.14
3lnc_A231 Guanylate kinase, GMP kinase; ALS collaborative cr 91.03
2gk6_A 624 Regulator of nonsense transcripts 1; UPF1, helicas 90.87
1j8m_F297 SRP54, signal recognition 54 kDa protein; signalin 90.67
4b4t_M 434 26S protease regulatory subunit 6A; hydrolase, AAA 90.49
2dr3_A247 UPF0273 protein PH0284; RECA superfamily ATPase, h 90.48
2ehv_A251 Hypothetical protein PH0186; KAIC, RECA ATPase, un 90.48
2v3c_C432 SRP54, signal recognition 54 kDa protein; nucleoti 90.45
3b9q_A302 Chloroplast SRP receptor homolog, alpha subunit CP 90.43
4gp7_A171 Metallophosphoesterase; polynucleotide kinase phos 90.38
3jvv_A356 Twitching mobility protein; hexameric P-loop ATPas 90.38
1rj9_A304 FTSY, signal recognition protein; SRP-GTPase domai 90.32
2i1q_A322 DNA repair and recombination protein RADA; ATPase, 90.3
2xxa_A433 Signal recognition particle protein; protein trans 90.28
3hr8_A356 Protein RECA; alpha and beta proteins (A/B, A+B), 90.28
3tqc_A321 Pantothenate kinase; biosynthesis of cofactors, pr 90.15
3aez_A312 Pantothenate kinase; transferase, homodimer, COA b 90.04
3vkw_A446 Replicase large subunit; alpha/beta domain, helica 90.03
4b4t_L 437 26S protease subunit RPT4; hydrolase, AAA-atpases, 90.02
4b4t_K 428 26S protease regulatory subunit 6B homolog; hydrol 89.99
1gtv_A214 TMK, thymidylate kinase; transferase, transferase 89.99
4eaq_A229 DTMP kinase, thymidylate kinase; structural genomi 89.96
2ewv_A372 Twitching motility protein PILT; pilus retraction 89.94
1zu4_A320 FTSY; GTPase, signal recognition particle, SRP, re 89.8
1cr0_A296 DNA primase/helicase; RECA-type protein fold, tran 89.76
2r8r_A228 Sensor protein; KDPD, PFAM02702, MCSG, structural 89.76
3e70_C328 DPA, signal recognition particle receptor; FTSY, S 89.72
1odf_A290 YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser 89.72
2j37_W 504 Signal recognition particle 54 kDa protein (SRP54) 89.65
1g8f_A511 Sulfate adenylyltransferase; alpha-beta protein, b 89.64
1x6v_B 630 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 89.59
3io5_A333 Recombination and repair protein; storage dimer, i 89.39
1np6_A174 Molybdopterin-guanine dinucleotide biosynthesis pr 89.39
1sq5_A308 Pantothenate kinase; P-loop, transferase; HET: PAU 89.37
2j9r_A214 Thymidine kinase; TK1, DNK, lasso, transferase, AT 89.34
1p9r_A418 General secretion pathway protein E; bacterial typ 89.09
1u94_A356 RECA protein, recombinase A; homologous recombinat 89.02
3lda_A400 DNA repair protein RAD51; DNA binding protein, ATP 89.0
2wjy_A 800 Regulator of nonsense transcripts 1; nonsense medi 88.89
2og2_A359 Putative signal recognition particle receptor; nuc 88.88
1d2n_A 272 N-ethylmaleimide-sensitive fusion protein; hexamer 88.66
3tif_A235 Uncharacterized ABC transporter ATP-binding prote; 88.6
2onk_A240 Molybdate/tungstate ABC transporter, ATP-binding p 88.59
1f2t_A149 RAD50 ABC-ATPase; DNA double-strand break repair, 88.47
2axn_A 520 6-phosphofructo-2-kinase/fructose-2,6- biphosphata 88.42
4b4t_I 437 26S protease regulatory subunit 4 homolog; hydrola 88.3
2zts_A251 Putative uncharacterized protein PH0186; KAIC like 88.26
3cmw_A 1706 Protein RECA, recombinase A; homologous recombinat 88.11
3tmk_A216 Thymidylate kinase; phosphotransferase; HET: T5A; 88.08
2f1r_A171 Molybdopterin-guanine dinucleotide biosynthesis pr 88.02
3tqf_A181 HPR(Ser) kinase; transferase, hydrolase; 2.80A {Co 88.01
2pcj_A224 ABC transporter, lipoprotein-releasing system ATP- 87.98
4b4t_H 467 26S protease regulatory subunit 7 homolog; hydrola 87.97
3sop_A270 Neuronal-specific septin-3; hydrolase; HET: GDP; 2 87.85
4i1u_A210 Dephospho-COA kinase; structural genomics, niaid, 87.76
1lw7_A365 Transcriptional regulator NADR; NMN, NMN adenylyl 87.74
2xzl_A 802 ATP-dependent helicase NAM7; hydrolase-RNA complex 87.66
1p5z_B263 DCK, deoxycytidine kinase; nucleoside kinase, P-lo 87.66
1sgw_A214 Putative ABC transporter; structural genomics, P p 87.46
1b0u_A262 Histidine permease; ABC transporter, transport pro 87.44
2cbz_A237 Multidrug resistance-associated protein 1; ABC pro 87.34
4g1u_C266 Hemin import ATP-binding protein HMUV; membrane tr 87.28
1nlf_A279 Regulatory protein REPA; replicative DNA helicase 87.28
3gfo_A275 Cobalt import ATP-binding protein CBIO 1; structur 87.23
2p67_A341 LAO/AO transport system kinase; ARGK, structural G 87.18
2f9l_A199 RAB11B, member RAS oncogene family; RAB11B GTPase, 87.18
3llm_A235 ATP-dependent RNA helicase A; alpha-beta-alpha, st 87.17
1g6h_A257 High-affinity branched-chain amino acid transport 87.06
2d2e_A250 SUFC protein; ABC-ATPase, SUF protein, 310-helix, 86.92
3rlf_A381 Maltose/maltodextrin import ATP-binding protein M; 86.82
1ls1_A295 Signal recognition particle protein; FFH, SRP54, S 86.82
3cmu_A 2050 Protein RECA, recombinase A; homologous recombinat 86.8
3bh0_A315 DNAB-like replicative helicase; ATPase, replicatio 86.78
3fvq_A359 Fe(3+) IONS import ATP-binding protein FBPC; nucle 86.78
2wsm_A221 Hydrogenase expression/formation protein (HYPB); m 86.73
2zu0_C267 Probable ATP-dependent transporter SUFC; iron-sulf 86.71
1mv5_A243 LMRA, multidrug resistance ABC transporter ATP-bin 86.7
2npi_A460 Protein CLP1; CLP1-PCF11 complex, ATP binding, ter 86.68
1ji0_A240 ABC transporter; ATP binding protein, structural g 86.66
2pze_A229 Cystic fibrosis transmembrane conductance regulat; 86.57
3syl_A 309 Protein CBBX; photosynthesis, rubisco activase, AA 86.56
2yhs_A503 FTSY, cell division protein FTSY; cell cycle, prot 86.54
2ff7_A247 Alpha-hemolysin translocation ATP-binding protein 86.49
1z47_A355 CYSA, putative ABC-transporter ATP-binding protein 86.47
2qm8_A337 GTPase/ATPase; G protein, G3E, metallochaperone, c 86.45
3cmw_A 1706 Protein RECA, recombinase A; homologous recombinat 86.45
2olj_A263 Amino acid ABC transporter; ABC domain, ATPase, hy 86.41
2it1_A362 362AA long hypothetical maltose/maltodextrin trans 86.38
3qks_A203 DNA double-strand break repair RAD50 ATPase; RECA- 86.38
2ffh_A425 Protein (FFH); SRP54, signal recognition particle, 86.34
1iy2_A 278 ATP-dependent metalloprotease FTSH; AAA domain fol 86.26
1tue_A 212 Replication protein E1; helicase, replication, E1E 86.25
2yyz_A359 Sugar ABC transporter, ATP-binding protein; sugar 86.15
2oze_A298 ORF delta'; para, walker type atpases, DNA segrega 86.15
2dyk_A161 GTP-binding protein; GTPase, ribosome-binding prot 86.1
1qhl_A227 Protein (cell division protein MUKB); SMC, chromos 86.08
1vpl_A256 ABC transporter, ATP-binding protein; TM0544, stru 86.0
1w4r_A195 Thymidine kinase; type II, human, cytosolic, phosp 85.98
1m8p_A573 Sulfate adenylyltransferase; rossmann fold, phosph 85.97
2qi9_C249 Vitamin B12 import ATP-binding protein BTUD; inner 85.96
1oix_A191 RAS-related protein RAB-11A; small G protein, intr 85.94
1v43_A372 Sugar-binding transport ATP-binding protein; ATPas 85.85
2ocp_A241 DGK, deoxyguanosine kinase; protein-nucleotide com 85.84
2ghi_A260 Transport protein; multidrug resistance protein, M 85.76
2ihy_A279 ABC transporter, ATP-binding protein; ATPase, ABC 85.65
1g29_1372 MALK, maltose transport protein MALK; ATPase, acti 85.61
2nq2_C253 Hypothetical ABC transporter ATP-binding protein H 85.42
2ixe_A271 Antigen peptide transporter 1; ABC ATPase, hydrola 85.38
2yz2_A266 Putative ABC transporter ATP-binding protein TM_0; 85.31
1tq4_A413 IIGP1, interferon-inducible GTPase; interferon gam 85.09
1z2a_A168 RAS-related protein RAB-23; RAB GTPase, vesicular 85.07
2www_A349 Methylmalonic aciduria type A protein, mitochondri 84.89
2zej_A184 Dardarin, leucine-rich repeat kinase 2; parkinson' 84.73
1kao_A167 RAP2A; GTP-binding protein, small G protein, GDP, 84.73
2pjz_A263 Hypothetical protein ST1066; ATP binding protein, 84.72
3b6e_A216 Interferon-induced helicase C domain-containing P; 84.64
2obl_A347 ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O 84.46
2ged_A193 SR-beta, signal recognition particle receptor beta 84.43
1nrj_B218 SR-beta, signal recognition particle receptor beta 84.41
2wji_A165 Ferrous iron transport protein B homolog; membrane 84.4
2r6a_A454 DNAB helicase, replicative helicase; replication, 84.22
3gd7_A390 Fusion complex of cystic fibrosis transmembrane co 84.19
3d31_A348 Sulfate/molybdate ABC transporter, ATP-binding pro 84.18
1ixz_A 254 ATP-dependent metalloprotease FTSH; AAA domain fol 84.17
2wjg_A188 FEOB, ferrous iron transport protein B homolog; me 84.13
1ek0_A170 Protein (GTP-binding protein YPT51); vesicular tra 83.96
2ce2_X166 GTPase HRAS; signaling protein, guanine nucleotide 83.95
2nzj_A175 GTP-binding protein REM 1; GDP/GTP binding, GTP hy 83.87
1e69_A322 Chromosome segregation SMC protein; structural mai 83.82
1z08_A170 RAS-related protein RAB-21; RAB GTPase, vesicular 83.81
4tmk_A213 Protein (thymidylate kinase); ATP:DTMP phosphotran 83.78
1wms_A177 RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, p 83.76
3lv8_A236 DTMP kinase, thymidylate kinase; structural genomi 83.74
1u8z_A168 RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNH 83.74
1z0j_A170 RAB-22, RAS-related protein RAB-22A; RAB GTPase, R 83.68
3cr8_A552 Sulfate adenylyltranferase, adenylylsulfate kinase 83.66
1ky3_A182 GTP-binding protein YPT7P; vesicular traffic, GTP 83.49
2dpy_A438 FLII, flagellum-specific ATP synthase; beta barrel 83.45
3qf7_A365 RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1. 83.31
3pfi_A 338 Holliday junction ATP-dependent DNA helicase RUVB; 83.25
2w58_A 202 DNAI, primosome component (helicase loader); ATP-b 83.24
2z0m_A337 337AA long hypothetical ATP-dependent RNA helicase 83.18
3tui_C366 Methionine import ATP-binding protein METN; ABC-tr 83.16
1c1y_A167 RAS-related protein RAP-1A; GTP-binding proteins, 83.14
1g16_A170 RAS-related protein SEC4; G protein RAB, signaling 83.02
1r2q_A170 RAS-related protein RAB-5A; GTPase, GNP, atomic re 82.96
3q85_A169 GTP-binding protein REM 2; G-domain, CAV2 beta, si 82.85
2vp4_A230 Deoxynucleoside kinase; ATP-binding, DNA synthesis 82.82
2erx_A172 GTP-binding protein DI-RAS2; GTP hydrolysis, trans 82.81
1r8s_A164 ADP-ribosylation factor 1; protein transport/excha 82.61
3ld9_A223 DTMP kinase, thymidylate kinase; ssgcid, NIH, niai 82.56
1oxx_K353 GLCV, glucose, ABC transporter, ATP binding protei 82.56
3bos_A 242 Putative DNA replication factor; P-loop containing 82.48
2rcn_A358 Probable GTPase ENGC; YJEQ, circularly permuted, G 82.47
1nij_A318 Hypothetical protein YJIA; structural genomics, P- 82.31
2qag_B427 Septin-6, protein NEDD5; cell cycle, cell division 82.28
3cf0_A 301 Transitional endoplasmic reticulum ATPase; AAA, P9 82.18
2q6t_A444 DNAB replication FORK helicase; hydrolase; 2.90A { 82.18
1bif_A 469 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; 82.15
3bc1_A195 RAS-related protein RAB-27A; RAB27, GTPase, RAB, s 82.12
2bbs_A290 Cystic fibrosis transmembrane conductance regulato 82.05
3fwy_A314 Light-independent protochlorophyllide reductase I 82.04
2lkc_A178 Translation initiation factor IF-2; NMR {Geobacill 82.01
3con_A190 GTPase NRAS; structural genomics consortium, SGC, 81.85
3ice_A422 Transcription termination factor RHO; transcriptio 81.81
2fwr_A472 DNA repair protein RAD25; DNA unwinding, XPB, DNA 81.75
2hxs_A178 RAB-26, RAS-related protein RAB-28; GTPase, signal 81.72
2oil_A193 CATX-8, RAS-related protein RAB-25; G-protein, GDP 81.72
2gj8_A172 MNME, tRNA modification GTPase TRME; G-domain dime 81.67
1z0f_A179 RAB14, member RAS oncogene family; RAB GTPase, ves 81.65
2fn4_A181 P23, RAS-related protein R-RAS; GDP/GTP binding, G 81.63
2y8e_A179 RAB-protein 6, GH09086P, RAB6; hydrolase, nucleoti 81.61
1upt_A171 ARL1, ADP-ribosylation factor-like protein 1; hydr 81.6
2dhr_A 499 FTSH; AAA+ protein, hexameric Zn metalloprotease, 81.58
2hf9_A226 Probable hydrogenase nickel incorporation protein 81.55
4dsu_A189 GTPase KRAS, isoform 2B; small G-protein, signalin 81.5
3clv_A208 RAB5 protein, putative; malaria, GTPase, structura 81.5
2efe_B181 Small GTP-binding protein-like; GEF, GTPase, VPS9, 81.47
3pxg_A 468 Negative regulator of genetic competence CLPC/MEC; 81.43
1lkx_A 697 Myosin IE heavy chain; myosin motor domain, lever 81.35
3b9p_A 297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 81.28
3h4m_A 285 Proteasome-activating nucleotidase; ATPase, PAN, A 81.26
3eie_A 322 Vacuolar protein sorting-associated protein 4; AAA 81.21
3uk6_A 368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 81.2
2yv5_A302 YJEQ protein; hydrolase, GTPase, permutation, stru 81.19
3q72_A166 GTP-binding protein RAD; G-domain, CAV2 beta, sign 81.14
1m7b_A184 RND3/RHOE small GTP-binding protein; small GTPase, 81.03
3kjh_A254 CO dehydrogenase/acetyl-COA synthase complex, acce 80.98
2c9o_A456 RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- 80.98
2v26_A 784 Myosin VI; calmodulin-binding, nucleotide-binding, 80.95
3h1t_A590 Type I site-specific restriction-modification syst 80.89
1z6t_A 591 APAF-1, apoptotic protease activating factor 1; ca 80.88
2a9k_A187 RAS-related protein RAL-A; bacterial ADP-ribosyltr 80.84
4a1f_A338 DNAB helicase, replicative DNA helicase; hydrolase 80.81
2g6b_A180 RAS-related protein RAB-26; G-protein, GTP analogu 80.74
2bme_A186 RAB4A, RAS-related protein RAB4A; GTP-binding prot 80.63
3bgw_A444 DNAB-like replicative helicase; ATPase, replicatio 80.63
4dzz_A206 Plasmid partitioning protein PARF; deviant walker 80.58
1m2o_B190 GTP-binding protein SAR1, GTP binding protein; zin 80.55
3lfu_A 647 DNA helicase II; SF1 helicase, ATP-binding, DNA da 80.46
3nh6_A306 ATP-binding cassette SUB-family B member 6, mitoc; 80.45
4ag6_A392 VIRB4 ATPase, type IV secretory pathway VIRB4 comp 80.45
2gf9_A189 RAS-related protein RAB-3D; G-protein, structural 80.42
3kkq_A183 RAS-related protein M-RAS; GTP-binding, GTPase, si 80.31
3c5c_A187 RAS-like protein 12; GDP, GTPase, structural genom 80.23
3ihw_A184 Centg3; RAS, centaurin, GTPase, structural genomic 80.21
3tw8_B181 RAS-related protein RAB-35; longin domain, RAB GTP 80.18
4db1_A 783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 80.05
1mh1_A186 RAC1; GTP-binding, GTPase, small G-protein, RHO fa 80.01
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
Probab=100.00  E-value=5.5e-91  Score=791.75  Aligned_cols=378  Identities=44%  Similarity=0.767  Sum_probs=364.3

Q ss_pred             eeeeeehHHHHHHHH-ccCCCCcchhhhhcceEEEecCC----CcEEEEEccceeeccccccCCccceeechhhHHHHHH
Q psy6129           6 EVQWLTRWFLDLECR-MNIKSVNDFEWLKQCRFYFKDDL----DKTWINITDVTFTYQNEYLGCTERLVITPLTDRCYIT   80 (383)
Q Consensus         6 ~~~~~~rd~~~~l~~-~~~~~~~~f~W~~~lr~~~~~~~----~~~~v~~~~~~~~YgyEy~g~~~~lv~Tp~t~r~~~~   80 (383)
                      ++.|++|||+++|++ .+|.+.++|+|++||||||+++.    ++|.|++++++|+|||||+|+++|+|+||+|+|||.+
T Consensus       517 t~~VH~RDvv~~L~~~~~v~~~~dF~W~~qlRyy~~~~~~~~~~~~~v~~~~~~f~YgyEYlG~~~rLViTPLTdrcy~t  596 (3245)
T 3vkg_A          517 TELVHQRDVVRQLQKCKNLTGNKDFDWLYHMRYYYDATQENVLHKLVIHMANATFYYGFEYLGIGERLVQTPLTDRCYLT  596 (3245)
T ss_dssp             HHHHHHHHHHHHHHTCCSCCSTTCHHHHTSEEEEECSSSSSSGGGEEEEETTEEEECCCCCCCSCCCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcchhHHHhhhheeeccccCCcCceEEEEEcCceecCccccCCCCCCCcCChHHHHHHHH
Confidence            568999999999999 99999999999999999998764    3599999999999999999999999999999999999


Q ss_pred             HHHHHHccCCCCCcCCCCCCccHHHHHHHHHhCCcEEEEeCCCCCCHHHHHHHHhhhhhcCceEEecccccCChhhHHHH
Q psy6129          81 LAQALTMSMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVA  160 (383)
Q Consensus        81 l~~al~~~~~~~l~Gp~GtGKT~~i~~la~~lg~~~~~~~c~~~~~~~~l~~~l~g~~~~g~w~~~dein~l~~~~ls~l  160 (383)
                      +++|++.+.|+++.||+|||||+++++||+++|+++++|||++++++..++|+++|++++|+|+|||||||+++++||++
T Consensus       597 l~~Al~~~~gg~~~GPaGtGKTet~k~La~~lgr~~~vfnC~~~~d~~~~g~i~~G~~~~GaW~cfDEfNrl~~~vLSvv  676 (3245)
T 3vkg_A          597 LTQALESRMGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAMSRIFVGLCQCGAWGCFDEFNRLEERILSAV  676 (3245)
T ss_dssp             HHHHHHTTCEEEEECSTTSSHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHHHTCEEEEETTTSSCHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhCCeEEEEeCCCCCCHHHHHHHHhhHhhcCcEEEehhhhcCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCceeEecCCcEEEecCCeeEEEeeCCCCCCCCcchHHHHHhccccccCCCCHHHHHHHHHhhcCCC
Q psy6129         161 AQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCGFL  240 (383)
Q Consensus       161 ~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~if~T~np~~~g~~~lp~~l~~~fr~v~~~~Pd~~~i~ei~l~~~gf~  240 (383)
                      ++++..|+.++.++...+.+.+|+.|+++|++++|+||||||+||.+||++|+++||+|+|..||.+.|+||+|++.||.
T Consensus       677 ~~qi~~I~~a~~~~~~~~~~~~G~~i~l~~~~~vfiTmNpgY~gr~eLP~nLk~lFr~v~m~~Pd~~~i~ei~L~s~Gf~  756 (3245)
T 3vkg_A          677 SQQIQTIQVALKENSKEVELLGGKNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREMIAQVMLYSQGFK  756 (3245)
T ss_dssp             HHHHHHHHHHHHHTCSEECCC---CEECCTTCEEEECBCCCGGGCCCSCHHHHTTEEEEECCSCCHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHHHHHcCCCeEEecCCCEEeecCCeEEEEEeCCCccCcccChHHHHhhcEEEEEeCCCHHHHHHHHHHHcccc
Confidence            99999999999998888777448999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhccCCCCCccChhhhHHHHHhcchhhccC--------CC------------ChHHHHHHHHH
Q psy6129         241 ENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLGAAKRVN--------SR------------DTESTIVMRVL  300 (383)
Q Consensus       241 ~~~~la~ki~~~~~~~~~~ls~~~hy~f~lR~l~~vi~~~~~~~~~~--------~~------------~~e~~~~~~a~  300 (383)
                      +++.||+|++.+|++|+++||+|.|||||||++|+|+..||++||..        ++            .+|+.+++||+
T Consensus       757 ~a~~La~k~~~~~~l~~e~LS~Q~HYDfGLRalKsVL~~AG~lkr~~~~~~~~~~~~~~~~~~~~~~~~~~E~~illral  836 (3245)
T 3vkg_A          757 TAEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSVLVSAGGIKRKCQPPQLPPITDAESKTKADQIYCQYEIGVLLNSI  836 (3245)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCCCTTCCCSHHHHHHHHHHHHHHHHSCCCC------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987        44            57899999999


Q ss_pred             HHhhcCCCCCCChHHHHHHHHhhCCCCCCCCCChhHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhccccEEEECCCC
Q psy6129         301 RDMNLSKLIDEDEPLFISLVADLFPNQALEKTAYPALEGAIQEQCEAAGLIFHPPWVLKLIQLYETQRVRHGIMTLGPTG  380 (383)
Q Consensus       301 ~~~~~~~l~~~d~~~f~~li~~~Fp~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~i~kv~~l~~~l~~~~gviLvG~~G  380 (383)
                      +++++|||+.+|.++|.+++.|+||+++.+..++.++.++|.+.|++++|++++.|+.|++|||++++++||||||||||
T Consensus       837 rd~nlpKl~~~D~plF~~li~DlFPgv~~~~~~~~~l~~ai~~~~~~~~L~~~~~~v~KviQLye~~~vRhGvmlVGp~g  916 (3245)
T 3vkg_A          837 NDTMIPKLVADDIPLIQSLLLDVFPGSQLQPIQMDQLRKKIQEIAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSG  916 (3245)
T ss_dssp             HHTTTTTSCGGGHHHHHHHHHHHSTTCCCCCCCCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred             HHhccCCCchhhHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHheeeEEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q psy6129         381 AVT  383 (383)
Q Consensus       381 sGK  383 (383)
                      |||
T Consensus       917 sGK  919 (3245)
T 3vkg_A          917 GGK  919 (3245)
T ss_dssp             SSH
T ss_pred             CCH
Confidence            998
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Back     alignment and structure
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G Back     alignment and structure
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* Back     alignment and structure
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli} Back     alignment and structure
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} Back     alignment and structure
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus} Back     alignment and structure
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C* Back     alignment and structure
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* Back     alignment and structure
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* Back     alignment and structure
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A Back     alignment and structure
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} Back     alignment and structure
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Back     alignment and structure
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19} Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Back     alignment and structure
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* Back     alignment and structure
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae} Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Back     alignment and structure
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Back     alignment and structure
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A Back     alignment and structure
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 Back     alignment and structure
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium} Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} Back     alignment and structure
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* Back     alignment and structure
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A Back     alignment and structure
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A* Back     alignment and structure
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E* Back     alignment and structure
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} Back     alignment and structure
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B* Back     alignment and structure
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A* Back     alignment and structure
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* Back     alignment and structure
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} Back     alignment and structure
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} Back     alignment and structure
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Back     alignment and structure
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus} Back     alignment and structure
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} Back     alignment and structure
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 Back     alignment and structure
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E* Back     alignment and structure
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} Back     alignment and structure
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi} Back     alignment and structure
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* Back     alignment and structure
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A Back     alignment and structure
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A* Back     alignment and structure
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4} Back     alignment and structure
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A* Back     alignment and structure
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 Back     alignment and structure
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A* Back     alignment and structure
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} Back     alignment and structure
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP} Back     alignment and structure
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58} Back     alignment and structure
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* Back     alignment and structure
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 Back     alignment and structure
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A* Back     alignment and structure
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* Back     alignment and structure
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A Back     alignment and structure
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A* Back     alignment and structure
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A Back     alignment and structure
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} Back     alignment and structure
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A* Back     alignment and structure
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} Back     alignment and structure
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A Back     alignment and structure
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} Back     alignment and structure
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A Back     alignment and structure
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} Back     alignment and structure
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* Back     alignment and structure
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana} Back     alignment and structure
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A Back     alignment and structure
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} Back     alignment and structure
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A Back     alignment and structure
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A Back     alignment and structure
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1 Back     alignment and structure
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus} Back     alignment and structure
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A* Back     alignment and structure
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A* Back     alignment and structure
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A Back     alignment and structure
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B* Back     alignment and structure
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A* Back     alignment and structure
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* Back     alignment and structure
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A* Back     alignment and structure
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* Back     alignment and structure
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1 Back     alignment and structure
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A* Back     alignment and structure
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* Back     alignment and structure
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 Back     alignment and structure
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II} Back     alignment and structure
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 Back     alignment and structure
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* Back     alignment and structure
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A* Back     alignment and structure
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} Back     alignment and structure
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A* Back     alignment and structure
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1 Back     alignment and structure
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A* Back     alignment and structure
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A* Back     alignment and structure
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A* Back     alignment and structure
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A* Back     alignment and structure
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* Back     alignment and structure
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae} Back     alignment and structure
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A* Back     alignment and structure
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima} Back     alignment and structure
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} Back     alignment and structure
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus} Back     alignment and structure
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A* Back     alignment and structure
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum} Back     alignment and structure
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19 Back     alignment and structure
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} Back     alignment and structure
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A Back     alignment and structure
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* Back     alignment and structure
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A* Back     alignment and structure
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A Back     alignment and structure
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1 Back     alignment and structure
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11 Back     alignment and structure
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni} Back     alignment and structure
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* Back     alignment and structure
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii} Back     alignment and structure
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A* Back     alignment and structure
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1 Back     alignment and structure
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A Back     alignment and structure
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} Back     alignment and structure
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* Back     alignment and structure
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum} Back     alignment and structure
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A* Back     alignment and structure
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A Back     alignment and structure
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A Back     alignment and structure
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii} Back     alignment and structure
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} Back     alignment and structure
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} Back     alignment and structure
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A Back     alignment and structure
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25 Back     alignment and structure
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A* Back     alignment and structure
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1 Back     alignment and structure
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum} Back     alignment and structure
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D* Back     alignment and structure
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A Back     alignment and structure
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1 Back     alignment and structure
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes} Back     alignment and structure
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} Back     alignment and structure
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ... Back     alignment and structure
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} Back     alignment and structure
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A* Back     alignment and structure
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A* Back     alignment and structure
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1 Back     alignment and structure
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* Back     alignment and structure
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14 Back     alignment and structure
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix} Back     alignment and structure
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima} Back     alignment and structure
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* Back     alignment and structure
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 Back     alignment and structure
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} Back     alignment and structure
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A Back     alignment and structure
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A* Back     alignment and structure
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A Back     alignment and structure
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A* Back     alignment and structure
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6 Back     alignment and structure
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A Back     alignment and structure
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A* Back     alignment and structure
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6 Back     alignment and structure
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940} Back     alignment and structure
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10 Back     alignment and structure
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2} Back     alignment and structure
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A Back     alignment and structure
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A* Back     alignment and structure
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A* Back     alignment and structure
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} Back     alignment and structure
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11 Back     alignment and structure
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis} Back     alignment and structure
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X* Back     alignment and structure
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A* Back     alignment and structure
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* Back     alignment and structure
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A* Back     alignment and structure
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus} Back     alignment and structure
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A* Back     alignment and structure
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A Back     alignment and structure
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A* Back     alignment and structure
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A* Back     alignment and structure
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A Back     alignment and structure
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1 Back     alignment and structure
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2 Back     alignment and structure
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum} Back     alignment and structure
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A Back     alignment and structure
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F Back     alignment and structure
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B Back     alignment and structure
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana} Back     alignment and structure
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A* Back     alignment and structure
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A* Back     alignment and structure
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D* Back     alignment and structure
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A* Back     alignment and structure
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9 Back     alignment and structure
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima} Back     alignment and structure
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} Back     alignment and structure
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* Back     alignment and structure
>3vkw_A Replicase large subunit; alpha/beta domain, helicase, transferase; 1.90A {Tomato mosaic virus} Back     alignment and structure
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A* Back     alignment and structure
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A Back     alignment and structure
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A* Back     alignment and structure
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A Back     alignment and structure
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A* Back     alignment and structure
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV} Back     alignment and structure
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B* Back     alignment and structure
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 Back     alignment and structure
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Back     alignment and structure
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A* Back     alignment and structure
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4} Back     alignment and structure
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A Back     alignment and structure
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* Back     alignment and structure
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A* Back     alignment and structure
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A* Back     alignment and structure
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A Back     alignment and structure
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A* Back     alignment and structure
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A Back     alignment and structure
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A* Back     alignment and structure
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12 Back     alignment and structure
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A* Back     alignment and structure
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* Back     alignment and structure
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii} Back     alignment and structure
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A* Back     alignment and structure
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A* Back     alignment and structure
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus} Back     alignment and structure
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii} Back     alignment and structure
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A Back     alignment and structure
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens} Back     alignment and structure
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A* Back     alignment and structure
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1 Back     alignment and structure
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ... Back     alignment and structure
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12 Back     alignment and structure
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12 Back     alignment and structure
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens} Back     alignment and structure
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis} Back     alignment and structure
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A Back     alignment and structure
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124} Back     alignment and structure
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10 Back     alignment and structure
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A* Back     alignment and structure
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens} Back     alignment and structure
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A* Back     alignment and structure
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A* Back     alignment and structure
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A Back     alignment and structure
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A* Back     alignment and structure
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} Back     alignment and structure
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1} Back     alignment and structure
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus} Back     alignment and structure
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A Back     alignment and structure
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12 Back     alignment and structure
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae} Back     alignment and structure
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Back     alignment and structure
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A Back     alignment and structure
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A* Back     alignment and structure
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A* Back     alignment and structure
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A* Back     alignment and structure
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J* Back     alignment and structure
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii} Back     alignment and structure
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A* Back     alignment and structure
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 Back     alignment and structure
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima} Back     alignment and structure
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes} Back     alignment and structure
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus} Back     alignment and structure
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12 Back     alignment and structure
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A* Back     alignment and structure
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A* Back     alignment and structure
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C Back     alignment and structure
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B* Back     alignment and structure
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A* Back     alignment and structure
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str} Back     alignment and structure
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus} Back     alignment and structure
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A Back     alignment and structure
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae} Back     alignment and structure
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A* Back     alignment and structure
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima} Back     alignment and structure
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A* Back     alignment and structure
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A* Back     alignment and structure
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens} Back     alignment and structure
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B* Back     alignment and structure
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R* Back     alignment and structure
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii} Back     alignment and structure
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens} Back     alignment and structure
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A* Back     alignment and structure
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A* Back     alignment and structure
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A Back     alignment and structure
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens} Back     alignment and structure
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12 Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii} Back     alignment and structure
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 Back     alignment and structure
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ... Back     alignment and structure
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens} Back     alignment and structure
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A* Back     alignment and structure
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A* Back     alignment and structure
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A* Back     alignment and structure
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A* Back     alignment and structure
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A* Back     alignment and structure
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A* Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Back     alignment and structure
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A* Back     alignment and structure
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium} Back     alignment and structure
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A* Back     alignment and structure
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii} Back     alignment and structure
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C Back     alignment and structure
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D* Back     alignment and structure
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A Back     alignment and structure
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A* Back     alignment and structure
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A* Back     alignment and structure
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A* Back     alignment and structure
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ... Back     alignment and structure
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A* Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V Back     alignment and structure
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1 Back     alignment and structure
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus} Back     alignment and structure
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A Back     alignment and structure
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A* Back     alignment and structure
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A* Back     alignment and structure
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} Back     alignment and structure
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A* Back     alignment and structure
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A* Back     alignment and structure
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A Back     alignment and structure
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A* Back     alignment and structure
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A* Back     alignment and structure
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens} Back     alignment and structure
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A Back     alignment and structure
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A* Back     alignment and structure
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A* Back     alignment and structure
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A* Back     alignment and structure
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A* Back     alignment and structure
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} Back     alignment and structure
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A* Back     alignment and structure
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A* Back     alignment and structure
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum} Back     alignment and structure
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B* Back     alignment and structure
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Back     alignment and structure
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus} Back     alignment and structure
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A* Back     alignment and structure
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B* Back     alignment and structure
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A* Back     alignment and structure
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Back     alignment and structure
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus} Back     alignment and structure
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens} Back     alignment and structure
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A* Back     alignment and structure
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori} Back     alignment and structure
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8 Back     alignment and structure
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A* Back     alignment and structure
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1} Back     alignment and structure
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* Back     alignment and structure
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B* Back     alignment and structure
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A* Back     alignment and structure
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A* Back     alignment and structure
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A Back     alignment and structure
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A* Back     alignment and structure
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A* Back     alignment and structure
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens} Back     alignment and structure
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens} Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Back     alignment and structure
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 99.21
d1g8pa_333 ATPase subunit of magnesium chelatase, BchI {Rhodo 99.2
d1ofha_309 HslU {Haemophilus influenzae [TaxId: 727]} 99.14
d1ixsb2239 Holliday junction helicase RuvB {Thermus thermophi 99.11
d1r6bx3315 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 99.1
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 99.06
d1ixza_247 AAA domain of cell division protein FtsH {Thermus 98.99
d1e32a2258 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 98.97
d1ny5a2247 Transcriptional activator sigm54 (NtrC1), C-termin 98.92
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 98.92
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 98.92
d1qvra3315 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 98.91
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 98.89
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 98.87
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 98.87
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 98.8
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 98.79
d1w44a_321 NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} 98.76
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 98.72
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 98.65
d1jbka_195 ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} 98.59
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 98.55
d1r6bx2268 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 98.44
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 98.32
d1svma_362 Papillomavirus large T antigen helicase domain {Si 98.24
d1qvra2387 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 98.19
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 98.09
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 97.95
d1g41a_443 HslU {Haemophilus influenzae [TaxId: 727]} 97.93
d2gnoa2198 gamma subunit of DNA polymerase III, N-domain {The 97.88
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 97.66
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 97.5
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 97.17
d1lw7a2192 Transcriptional regulator NadR, ribosylnicotinamid 97.14
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 97.13
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 97.06
d1yj5a2172 5' polynucleotide kinase-3' phosphatase, C-termina 97.03
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 96.96
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 96.96
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 96.92
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 96.92
d2iyva1165 Shikimate kinase (AroK) {Mycobacterium tuberculosi 96.79
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 96.75
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 96.66
d1tuea_205 Replication protein E1 helicase domain {Human papi 96.39
d1u0ja_267 Rep 40 protein helicase domain {Adeno-associated v 96.33
d1zina1182 Adenylate kinase {Bacillus stearothermophilus [Tax 96.32
d1s3ga1182 Adenylate kinase {Bacillus globisporus [TaxId: 145 96.31
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 96.3
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 96.3
d1ak2a1190 Adenylate kinase {Cow (Bos taurus), mitochondrial 96.26
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 96.24
d1ukza_196 Uridylate kinase {Baker's yeast (Saccharomyces cer 96.17
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 96.17
d2cdna1181 Adenylate kinase {Mycobacterium tuberculosis [TaxI 96.1
d3adka_194 Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} 96.08
d1zaka1189 Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} 96.06
d1akya1180 Adenylate kinase {Baker's yeast (Saccharomyces cer 96.05
d1teva_194 UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] 96.04
d2ak3a1189 Adenylate kinase {Cow (Bos taurus), mitochondrial 95.98
d1a1va1136 HCV helicase domain {Human hepatitis C virus (HCV) 95.97
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 95.95
d2fnaa2283 Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ 95.93
d1ckea_225 CMP kinase {Escherichia coli [TaxId: 562]} 95.91
d1q3ta_223 CMP kinase {Streptococcus pneumoniae [TaxId: 1313] 95.9
d1e4va1179 Adenylate kinase {Escherichia coli [TaxId: 562]} 95.85
d1ls1a2207 GTPase domain of the signal sequence recognition p 95.78
d1okkd2207 GTPase domain of the signal recognition particle r 95.77
d1j8yf2211 GTPase domain of the signal sequence recognition p 95.76
d2qy9a2211 GTPase domain of the signal recognition particle r 95.73
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 95.73
d1vmaa2213 GTPase domain of the signal recognition particle r 95.6
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 95.54
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 95.38
d1gkya_186 Guanylate kinase {Baker's yeast (Saccharomyces cer 95.2
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 95.1
d1bifa1213 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 95.05
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 95.05
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 94.66
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 94.59
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 94.47
d1htwa_158 Hypothetical protein HI0065 {Haemophilus influenza 94.46
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 94.11
d1kgda_178 Guanylate kinase-like domain of Cask {Human (Homo 94.01
d1yrba1244 ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss 93.9
d1znwa1182 Guanylate kinase {Mycobacterium tuberculosis [TaxI 93.81
d2fz4a1206 DNA repair protein RAD25 {Archaeoglobus fulgidus [ 93.72
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 93.54
d2eyqa3233 Transcription-repair coupling factor, TRCF {Escher 93.42
d1w36d1359 Exodeoxyribonuclease V alpha chain (RecD) {Escheri 93.06
d1szpa2251 DNA repair protein Rad51, catalytic domain {Baker' 92.67
d1pzna2254 DNA repair protein Rad51, catalytic domain {Archae 92.59
d1uaaa1306 DEXX box DNA helicase {Escherichia coli, RepD [Tax 92.56
d1s96a_205 Guanylate kinase {Escherichia coli [TaxId: 562]} 92.44
d1tf7a2242 Circadian clock protein KaiC {Synechococcus sp. st 91.88
d1nn5a_209 Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 91.69
d1pjra1318 DEXX box DNA helicase {Bacillus stearothermophilus 91.25
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 91.19
d2pmka1241 Haemolysin B ATP-binding protein {Escherichia coli 91.02
d1gsia_208 Thymidylate kinase {Mycobacterium tuberculosis [Ta 90.74
d2vp4a1197 Deoxyribonucleoside kinase {Fruit fly (Drosophila 90.7
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 90.5
d1kkma_176 HPr kinase HprK C-terminal domain {Lactobacillus c 90.47
d1r8sa_160 ADP-ribosylation factor {Human (Homo sapiens), ARF 90.4
d1tmka_214 Thymidylate kinase {Baker's yeast (Saccharomyces c 90.32
d1jj7a_251 Peptide transporter Tap1, C-terminal ABC domain {H 90.08
d2i1qa2258 DNA repair protein Rad51, catalytic domain {Archae 90.01
d1uf9a_191 Dephospho-CoA kinase {Thermus thermophilus [TaxId: 90.01
d2qm8a1323 Metallochaperone MeaB {Methylobacterium extorquens 89.89
d1n0wa_242 DNA repair protein Rad51, catalytic domain {Human 89.82
g1xew.1329 Smc head domain {Pyrococcus furiosus [TaxId: 2261] 89.58
d2p67a1327 LAO/AO transport system kinase ArgK {Escherichia c 89.51
d1ofha_ 309 HslU {Haemophilus influenzae [TaxId: 727]} 89.3
d1g2912240 Maltose transport protein MalK, N-terminal domain 89.19
d2awna2232 Maltose transport protein MalK, N-terminal domain 89.17
d1u94a1263 RecA protein, ATPase-domain {Escherichia coli [Tax 89.07
d1l2ta_230 MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 89.06
d2onka1240 Molybdate/tungstate import ATP-binding protein Wtp 88.91
d1v5wa_258 Meiotic recombination protein DMC1/LIM15 homolog { 88.91
d1sgwa_200 Putative ABC transporter PF0895 {Pyrococcus furios 88.49
d1v43a3239 Hypothetical protein PH0022, N-terminal domain {Py 88.38
d4tmka_210 Thymidylate kinase {Escherichia coli [TaxId: 562]} 88.28
d1ko7a2169 HPr kinase HprK C-terminal domain {Staphylococcus 88.12
d1qhla_222 Cell division protein MukB {Escherichia coli [TaxI 87.89
d1knxa2177 HPr kinase HprK C-terminal domain {Mycoplasma pneu 87.77
d1ihua1296 Arsenite-translocating ATPase ArsA {Escherichia co 87.74
g1f2t.1292 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 87.74
d1c4oa1408 Nucleotide excision repair enzyme UvrB {Thermus th 87.67
d3dhwc1240 Methionine import ATP-binding protein MetN {Escher 87.64
d2ocpa1241 Deoxyguanosine kinase {Human (Homo sapiens) [TaxId 87.62
d1upta_169 ADP-ribosylation factor {Human (Homo sapiens), ARL 87.61
d3d31a2229 Sulfate/molybdate ABC transporter, ATP-binding pro 87.53
d1a7ja_288 Phosphoribulokinase {Rhodobacter sphaeroides [TaxI 87.28
d1e69a_308 Smc head domain {Thermotoga maritima [TaxId: 2336] 87.24
d1u0la2225 Probable GTPase EngC (YjeQ), C-terminal domain {Th 87.24
d1jjva_205 Dephospho-CoA kinase {Haemophilus influenzae [TaxI 87.17
d1ihua2279 Arsenite-translocating ATPase ArsA {Escherichia co 86.9
d1gm5a3264 RecG helicase domain {Thermotoga maritima [TaxId: 86.76
d1l7vc_231 ABC transporter involved in vitamin B12 uptake, Bt 86.71
d2qtvb1166 SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta 86.62
d1odfa_286 Hypothetical protein Ygr205W {Baker's yeast (Sacch 86.59
d1p9ra_ 401 Extracellular secretion NTPase EpsE {Vibrio choler 86.52
d2a5yb3277 CED-4, NB-ARC domain {Caenorhabditis elegans [TaxI 86.51
d1vhta_208 Dephospho-CoA kinase {Escherichia coli [TaxId: 562 86.5
d2a5ja1173 Rab2b {Human (Homo sapiens) [TaxId: 9606]} 86.37
d3raba_169 Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} 86.28
d1f6ba_186 SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 86.23
d1z2aa1164 Rab23 {Mouse (Mus musculus) [TaxId: 10090]} 86.19
d1ksha_165 ADP-ribosylation factor {Mouse (Mus musculus), ARL 86.16
d1cr2a_277 Gene 4 protein (g4p, DNA primase), helicase domain 86.12
d3b60a1253 Multidrug resistance ABC transporter MsbA, C-termi 86.04
d1ji0a_240 Branched chain aminoacid ABC transporter {Thermoto 85.99
d1mv5a_242 Multidrug resistance ABC transporter LmrA, C-termi 85.91
d1p5zb_241 Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 85.81
d2hyda1255 Putative multidrug export ATP-binding/permease pro 85.78
d1b0ua_258 ATP-binding subunit of the histidine permease {Sal 85.68
d1kaoa_167 Rap2a {Human (Homo sapiens) [TaxId: 9606]} 85.68
d1yksa1140 YFV helicase domain {Yellow fever virus [TaxId: 11 85.68
d1mkya1171 Probable GTPase Der, N-terminal and middle domains 85.63
d2atva1168 Ras-like estrogen-regulated growth inhibitor, RERG 85.47
d1r0wa_281 Cystic fibrosis transmembrane conductance regulato 85.46
d1d0xa2 712 Myosin S1, motor domain {Dictyostelium discoideum 85.43
d1nrjb_209 Signal recognition particle receptor beta-subunit 85.3
d1z0fa1166 Rab14 {Human (Homo sapiens) [TaxId: 9606]} 85.26
d1vpla_238 Putative ABC transporter TM0544 {Thermotoga mariti 85.25
d2f7sa1186 Rab27b {Human (Homo sapiens) [TaxId: 9606]} 85.09
d1mo6a1269 RecA protein, ATPase-domain {Mycobacterium tubercu 85.0
d2ew1a1171 Rab30 {Human (Homo sapiens) [TaxId: 9606]} 84.88
d1cp2a_269 Nitrogenase iron protein {Clostridium pasteurianum 84.86
d1zd9a1164 ADP-ribosylation factor {Human (Homo sapiens), ARL 84.83
d1oxxk2242 Glucose transport protein GlcV, N-terminal domain 84.8
d1r2qa_170 Rab5a {Human (Homo sapiens) [TaxId: 9606]} 84.58
d2fh5b1207 Signal recognition particle receptor beta-subunit 84.57
d1z06a1165 Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} 84.53
d1tf7a1242 Circadian clock protein KaiC {Synechococcus sp. st 84.41
d1deka_241 Deoxynucleoside monophosphate kinase {Bacteriophag 84.39
d1w1wa_ 427 Smc head domain {Baker's yeast (Saccharomyces cere 84.13
d1g41a_ 443 HslU {Haemophilus influenzae [TaxId: 727]} 84.12
d1br2a2 710 Myosin S1, motor domain {Chicken (Gallus gallus), 84.12
d2f9la1175 Rab11b {Human (Homo sapiens) [TaxId: 9606]} 84.04
d1gkub1237 Helicase-like "domain" of reverse gyrase {Archaeon 83.98
d2afhe1289 Nitrogenase iron protein {Azotobacter vinelandii [ 83.95
d1z08a1167 Rab21 {Human (Homo sapiens) [TaxId: 9606]} 83.89
d1ky3a_175 Rab-related protein ypt7p {Baker's yeast (Saccharo 83.83
d2erxa1171 di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 83.79
d1zj6a1177 ADP-ribosylation factor {Human (Homo sapiens), ARL 83.62
d1ctqa_166 cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9 83.52
d1kk8a2 789 Myosin S1, motor domain {Bay scallop (Aequipecten 83.41
d1xtqa1167 GTP-binding protein RheB {Human (Homo sapiens) [Ta 83.38
d2erya1171 r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 83.35
d1sxja2 253 Replication factor C1 {Baker's yeast (Saccharomyce 83.33
d1lkxa_ 684 Myosin S1, motor domain {Dictyostelium discoideum, 83.21
d1g6ha_254 MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 82.9
d2g6ba1170 Rab26 {Human (Homo sapiens) [TaxId: 9606]} 82.89
d1vg8a_184 Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} 82.87
d1wp9a1200 putative ATP-dependent RNA helicase PF2015 {Pyroco 82.87
d1g16a_166 Rab-related protein Sec4 {Baker's yeast (Saccharom 82.76
d2mysa2 794 Myosin S1, motor domain {Chicken (Gallus gallus), 82.71
g1ii8.1369 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 82.5
d1ek0a_170 Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T 82.49
d2fn4a1173 r-Ras {Human (Homo sapiens) [TaxId: 9606]} 82.42
d1xp8a1268 RecA protein, ATPase-domain {Deinococcus radiodura 82.28
d1x3sa1177 Rab18 {Human (Homo sapiens) [TaxId: 9606]} 82.28
d1kmqa_177 RhoA {Human (Homo sapiens) [TaxId: 9606]} 82.1
d1wmsa_174 Rab9a {Human (Homo sapiens) [TaxId: 9606]} 82.07
d1c1ya_167 Rap1A {Human (Homo sapiens) [TaxId: 9606]} 81.93
d1fzqa_176 ADP-ribosylation factor {Mouse (Mus musculus), ARL 81.87
d1svia_195 Probable GTPase EngB {Bacillus subtilis [TaxId: 14 81.82
d1nlfa_274 Hexameric replicative helicase repA {Escherichia c 81.79
d2cxxa1184 GTP-binding protein engB {Pyrococcus horikoshii [T 81.78
d1wf3a1178 GTPase Era, N-terminal domain {Thermus thermophilu 81.77
d2bmea1174 Rab4a {Human (Homo sapiens) [TaxId: 9606]} 81.58
d1z0ja1167 Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} 81.57
d1x1ra1169 Ras-related protein M-Ras (XRas) {Mouse (Mus muscu 81.52
d1mh1a_183 Rac {Human (Homo sapiens) [TaxId: 9606]} 81.38
d2gjsa1168 Rad {Human (Homo sapiens) [TaxId: 9606]} 81.33
d2gj8a1161 Probable tRNA modification GTPase TrmE (MnmE), G d 81.24
d1yzqa1164 Rab6 {Human (Homo sapiens) [TaxId: 9606]} 81.21
d1u8za_168 Ras-related protein RalA {Cotton-top tamarin (Sagu 81.18
d2eyqa3 233 Transcription-repair coupling factor, TRCF {Escher 80.78
d2atxa1185 RhoQ {Human (Homo sapiens) [TaxId: 9606]} 80.55
d2fu5c1173 Rab8a {Mouse (Mus musculus) [TaxId: 10090]} 80.46
d2bcgy1194 GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi 80.43
d1lnza2185 Obg GTP-binding protein middle domain {Bacillus su 80.33
d1m7ba_179 RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} 80.13
d2g3ya1172 GTP-binding protein GEM {Human (Homo sapiens) [Tax 80.07
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: AAA domain of cell division protein FtsH
species: Escherichia coli [TaxId: 562]

Probab=99.21  E-value=6.3e-11  Score=105.64  Aligned_cols=165  Identities=17%  Similarity=0.191  Sum_probs=102.7

Q ss_pred             cCCCCCcCCCCCCccHHHHHHHHHhCCcEEEEeCCCCCC------HHHHHHHHhhhhh-cCceEEecccccCChh-----
Q psy6129          88 SMGGSPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMD------YRGLGRIYKGLAQ-SGSWGCFDEFNRIELP-----  155 (383)
Q Consensus        88 ~~~~~l~Gp~GtGKT~~i~~la~~lg~~~~~~~c~~~~~------~~~l~~~l~g~~~-~g~w~~~dein~l~~~-----  155 (383)
                      ..+.+|+||||||||.+++.+|+.+|.+++.++|+.-.+      ...+.+++.-+.+ ..+.+++||++.+-..     
T Consensus        45 ~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~  124 (256)
T d1lv7a_          45 PKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGL  124 (256)
T ss_dssp             CCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTS
T ss_pred             CCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhcchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCC
Confidence            345678999999999999999999999999999987653      4567788876643 4467889999864210     


Q ss_pred             --hHHHHHHHHHHHHHHHHhcCceeEecCCcEEEecCCeeEEEeeCCCCCCCCcchHHHHH--hc-cccccCCCCHHH--
Q psy6129         156 --VLSVAAQQVAVVLAAKKEKKKSFVFTDGDSIEMCPEFGIFITMNPGYAGRKELPENLKI--QF-RTVAMMVPDRQI--  228 (383)
Q Consensus       156 --~ls~l~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~if~T~np~~~g~~~lp~~l~~--~f-r~v~~~~Pd~~~--  228 (383)
                        .-....+.+..++..+..-.      .      ++++-+++|+|.    ...||+++++  || +.+.+..|+.+.  
T Consensus       125 ~~~~~~~~~~~~~ll~~~d~~~------~------~~~v~vIatTn~----~~~ld~al~R~gRfd~~i~i~~P~~~~R~  188 (256)
T d1lv7a_         125 GGGHDEREQTLNQMLVEMDGFE------G------NEGIIVIAATNR----PDVLDPALLRPGRFDRQVVVGLPDVRGRE  188 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHTCC------S------SSCEEEEEEESC----TTTSCGGGGSTTSSCEEEECCCCCHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHhhCCC------C------CCCEEEEEeCCC----cccCCHhHcCCCCCCEEEECCCcCHHHHH
Confidence              00011112222333332110      1      234678888884    2578999985  78 789999999755  


Q ss_pred             -HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhccCCCCCccChhhhHHHHHhcc
Q psy6129         229 -IIRVKLASCGFLENITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRSLG  281 (383)
Q Consensus       229 -i~ei~l~~~gf~~~~~la~ki~~~~~~~~~~ls~~~hy~f~lR~l~~vi~~~~  281 (383)
                       |++.++...+......+.       .+. +     ....|+-++|+.+++.|.
T Consensus       189 ~il~~~l~~~~~~~~~~~~-------~la-~-----~t~G~s~adi~~l~~~A~  229 (256)
T d1lv7a_         189 QILKVHMRRVPLAPDIDAA-------IIA-R-----GTPGFSGADLANLVNEAA  229 (256)
T ss_dssp             HHHHHHHTTSCBCTTCCHH-------HHH-H-----TCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCcCcccCHH-------HHH-H-----hCCCCCHHHHHHHHHHHH
Confidence             444444433332211110       011 1     122367788888887553
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Back     information, alignment and structure
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]} Back     information, alignment and structure
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]} Back     information, alignment and structure
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Back     information, alignment and structure
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Back     information, alignment and structure
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]} Back     information, alignment and structure
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]} Back     information, alignment and structure
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]} Back     information, alignment and structure
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]} Back     information, alignment and structure
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} Back     information, alignment and structure
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} Back     information, alignment and structure
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} Back     information, alignment and structure
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} Back     information, alignment and structure
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]} Back     information, alignment and structure
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]} Back     information, alignment and structure
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]} Back     information, alignment and structure
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} Back     information, alignment and structure
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure